Multiple sequence alignment - TraesCS3D01G510500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G510500 chr3D 100.000 2836 0 0 1 2836 595301609 595304444 0.000000e+00 5238.0
1 TraesCS3D01G510500 chr3D 92.541 1153 73 6 1332 2479 595674256 595675400 0.000000e+00 1640.0
2 TraesCS3D01G510500 chr3D 87.887 1065 105 12 1332 2381 595738944 595739999 0.000000e+00 1230.0
3 TraesCS3D01G510500 chr3D 87.407 1080 109 20 1512 2567 595286611 595285535 0.000000e+00 1216.0
4 TraesCS3D01G510500 chr3D 88.306 992 98 14 1334 2313 595705111 595706096 0.000000e+00 1173.0
5 TraesCS3D01G510500 chr3D 100.000 254 0 0 3150 3403 595304758 595305011 1.430000e-128 470.0
6 TraesCS3D01G510500 chr3D 83.471 484 42 17 1 473 595287735 595287279 1.890000e-112 416.0
7 TraesCS3D01G510500 chr3D 85.792 366 39 5 785 1150 595704757 595705109 3.210000e-100 375.0
8 TraesCS3D01G510500 chr3D 85.241 332 35 4 839 1166 595287060 595286739 2.530000e-86 329.0
9 TraesCS3D01G510500 chr3D 82.703 370 40 13 785 1152 595738599 595738946 1.190000e-79 307.0
10 TraesCS3D01G510500 chr3D 97.619 168 2 1 623 788 329681923 329681756 1.550000e-73 287.0
11 TraesCS3D01G510500 chr3D 96.970 165 3 1 624 786 250054020 250054184 3.350000e-70 276.0
12 TraesCS3D01G510500 chr3D 88.172 186 21 1 2565 2749 595740166 595740351 1.590000e-53 220.0
13 TraesCS3D01G510500 chr3D 85.638 188 17 9 1163 1345 159623078 159622896 4.480000e-44 189.0
14 TraesCS3D01G510500 chr3D 87.681 138 9 1 1 138 595738276 595738405 1.640000e-33 154.0
15 TraesCS3D01G510500 chr3D 86.111 144 17 2 3162 3304 595740456 595740597 5.880000e-33 152.0
16 TraesCS3D01G510500 chr3B 88.019 1060 98 13 1375 2413 798648155 798649206 0.000000e+00 1227.0
17 TraesCS3D01G510500 chr3B 90.092 868 81 2 1332 2198 798686468 798687331 0.000000e+00 1122.0
18 TraesCS3D01G510500 chr3B 85.417 336 37 7 820 1152 798686144 798686470 4.210000e-89 339.0
19 TraesCS3D01G510500 chr3B 85.047 321 33 6 785 1102 798647649 798647957 2.550000e-81 313.0
20 TraesCS3D01G510500 chr3B 80.997 321 34 11 1 310 799523568 799523264 2.640000e-56 230.0
21 TraesCS3D01G510500 chr3B 86.957 161 20 1 2587 2746 798690090 798690250 2.700000e-41 180.0
22 TraesCS3D01G510500 chr3B 94.175 103 6 0 1 103 798647340 798647442 1.260000e-34 158.0
23 TraesCS3D01G510500 chr3B 90.000 60 6 0 2481 2540 798689961 798690020 1.010000e-10 78.7
24 TraesCS3D01G510500 chr3A 87.583 1055 112 9 1332 2381 726515573 726516613 0.000000e+00 1205.0
25 TraesCS3D01G510500 chr3A 88.182 990 104 10 1332 2313 726458105 726459089 0.000000e+00 1168.0
26 TraesCS3D01G510500 chr3A 85.504 1021 106 20 1333 2343 726410956 726409968 0.000000e+00 1027.0
27 TraesCS3D01G510500 chr3A 85.135 370 44 7 785 1152 726515215 726515575 5.360000e-98 368.0
28 TraesCS3D01G510500 chr3A 84.756 328 39 4 839 1166 726411270 726410954 5.480000e-83 318.0
29 TraesCS3D01G510500 chr3A 89.247 186 19 1 2565 2749 726516783 726516968 7.340000e-57 231.0
30 TraesCS3D01G510500 chr3A 92.029 138 11 0 1 138 726514891 726515028 9.640000e-46 195.0
31 TraesCS3D01G510500 chr3A 88.489 139 12 3 3150 3288 726862647 726862513 7.550000e-37 165.0
32 TraesCS3D01G510500 chr3A 83.851 161 23 2 3162 3321 726517073 726517231 2.120000e-32 150.0
33 TraesCS3D01G510500 chr3A 92.308 104 8 0 522 625 726411394 726411291 7.610000e-32 148.0
34 TraesCS3D01G510500 chr3A 86.466 133 18 0 1033 1165 726381973 726381841 2.740000e-31 147.0
35 TraesCS3D01G510500 chr3A 88.182 110 11 1 792 901 726457807 726457914 2.760000e-26 130.0
36 TraesCS3D01G510500 chr3A 83.471 121 16 2 3150 3270 726542994 726543110 3.590000e-20 110.0
37 TraesCS3D01G510500 chr4B 96.970 165 3 1 624 786 54366998 54367162 3.350000e-70 276.0
38 TraesCS3D01G510500 chr1D 96.429 168 4 1 624 789 393479542 393479375 3.350000e-70 276.0
39 TraesCS3D01G510500 chr1D 95.294 170 6 1 619 786 9218377 9218208 5.600000e-68 268.0
40 TraesCS3D01G510500 chr6A 95.858 169 5 1 623 789 115317414 115317246 4.330000e-69 272.0
41 TraesCS3D01G510500 chr6A 86.550 171 19 2 1165 1334 172052322 172052155 5.800000e-43 185.0
42 TraesCS3D01G510500 chr4A 96.386 166 4 1 623 786 554787870 554788035 4.330000e-69 272.0
43 TraesCS3D01G510500 chr6D 94.857 175 5 3 624 794 449005174 449005348 1.560000e-68 270.0
44 TraesCS3D01G510500 chr2D 95.294 170 6 1 619 786 47423677 47423846 5.600000e-68 268.0
45 TraesCS3D01G510500 chr7A 87.006 177 15 5 1164 1335 641353430 641353257 3.470000e-45 193.0
46 TraesCS3D01G510500 chr5B 87.079 178 13 7 1165 1342 542951664 542951831 3.470000e-45 193.0
47 TraesCS3D01G510500 chr5B 85.714 175 19 5 1162 1335 119526408 119526239 2.700000e-41 180.0
48 TraesCS3D01G510500 chr1B 86.705 173 21 1 1163 1335 673550468 673550638 1.250000e-44 191.0
49 TraesCS3D01G510500 chr1B 85.714 175 19 4 1162 1335 407127232 407127063 2.700000e-41 180.0
50 TraesCS3D01G510500 chr1B 85.714 175 19 4 1162 1335 503202845 503203014 2.700000e-41 180.0
51 TraesCS3D01G510500 chr7B 85.795 176 18 5 1162 1335 579042718 579042888 2.700000e-41 180.0
52 TraesCS3D01G510500 chr1A 92.405 79 4 1 1 77 37142807 37142885 9.980000e-21 111.0
53 TraesCS3D01G510500 chr1A 91.139 79 5 1 1 77 37009137 37009215 4.640000e-19 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G510500 chr3D 595301609 595305011 3402 False 2854.000000 5238 100.000000 1 3403 2 chr3D.!!$F3 3402
1 TraesCS3D01G510500 chr3D 595674256 595675400 1144 False 1640.000000 1640 92.541000 1332 2479 1 chr3D.!!$F2 1147
2 TraesCS3D01G510500 chr3D 595704757 595706096 1339 False 774.000000 1173 87.049000 785 2313 2 chr3D.!!$F4 1528
3 TraesCS3D01G510500 chr3D 595285535 595287735 2200 True 653.666667 1216 85.373000 1 2567 3 chr3D.!!$R3 2566
4 TraesCS3D01G510500 chr3D 595738276 595740597 2321 False 412.600000 1230 86.510800 1 3304 5 chr3D.!!$F5 3303
5 TraesCS3D01G510500 chr3B 798647340 798649206 1866 False 566.000000 1227 89.080333 1 2413 3 chr3B.!!$F1 2412
6 TraesCS3D01G510500 chr3B 798686144 798690250 4106 False 429.925000 1122 88.116500 820 2746 4 chr3B.!!$F2 1926
7 TraesCS3D01G510500 chr3A 726457807 726459089 1282 False 649.000000 1168 88.182000 792 2313 2 chr3A.!!$F2 1521
8 TraesCS3D01G510500 chr3A 726409968 726411394 1426 True 497.666667 1027 87.522667 522 2343 3 chr3A.!!$R3 1821
9 TraesCS3D01G510500 chr3A 726514891 726517231 2340 False 429.800000 1205 87.569000 1 3321 5 chr3A.!!$F3 3320

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
639 729 0.042131 ACATACTCCCTCCGTTCCCA 59.958 55.0 0.0 0.0 0.0 4.37 F
1178 1280 0.179081 GCATGTACTCCCTCCGTTCC 60.179 60.0 0.0 0.0 0.0 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1590 1840 1.136329 AGATTGTCCTGCCAGTGGGT 61.136 55.0 12.15 0.0 36.17 4.51 R
2760 5502 0.329261 CCATCCTCCTCCAACAGCAA 59.671 55.0 0.00 0.0 0.00 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
103 105 1.530323 ACGCTGTTGGTACCAATTCC 58.470 50.000 29.40 17.43 38.28 3.01
119 121 2.287194 CCACCCCCTCCCCTCAAT 60.287 66.667 0.00 0.00 0.00 2.57
153 155 2.365617 ACCCATATCGTGCCTTGACTAG 59.634 50.000 0.00 0.00 0.00 2.57
163 165 4.379813 CGTGCCTTGACTAGCATGAAAAAT 60.380 41.667 0.00 0.00 46.70 1.82
168 170 8.313292 TGCCTTGACTAGCATGAAAAATAAAAT 58.687 29.630 0.00 0.00 33.08 1.82
169 171 8.811378 GCCTTGACTAGCATGAAAAATAAAATC 58.189 33.333 0.00 0.00 0.00 2.17
202 204 2.496817 CTGCTAGGCTGACGTCCC 59.503 66.667 14.12 8.00 0.00 4.46
203 205 2.037367 TGCTAGGCTGACGTCCCT 59.963 61.111 14.12 15.40 35.22 4.20
207 209 0.965866 CTAGGCTGACGTCCCTGTGA 60.966 60.000 20.02 3.33 32.65 3.58
232 237 3.640407 GGTCAGCCTGGCACCAGA 61.640 66.667 22.65 10.11 46.30 3.86
234 239 1.968540 GTCAGCCTGGCACCAGAAC 60.969 63.158 22.65 9.62 46.30 3.01
238 243 2.282462 CCTGGCACCAGAACACCC 60.282 66.667 18.44 0.00 46.30 4.61
257 262 3.193691 ACCCGTGTTCAATGTTGTCAAAA 59.806 39.130 0.00 0.00 0.00 2.44
266 271 5.890334 TCAATGTTGTCAAAAGGTTCTGTC 58.110 37.500 0.00 0.00 0.00 3.51
283 288 1.750780 TCGAGACGCCATGCTCTCT 60.751 57.895 10.06 0.00 33.77 3.10
287 292 1.219124 GACGCCATGCTCTCTTGGA 59.781 57.895 1.93 0.00 39.23 3.53
331 343 1.473434 CCCATGTAAGCTCTTCCGGTC 60.473 57.143 0.00 0.00 0.00 4.79
344 356 1.269012 TCCGGTCGGGTTATCAGTTT 58.731 50.000 9.68 0.00 37.00 2.66
345 357 1.624813 TCCGGTCGGGTTATCAGTTTT 59.375 47.619 9.68 0.00 37.00 2.43
346 358 1.735571 CCGGTCGGGTTATCAGTTTTG 59.264 52.381 0.74 0.00 0.00 2.44
353 365 5.467735 GTCGGGTTATCAGTTTTGTAACAGT 59.532 40.000 0.00 0.00 36.70 3.55
356 368 5.106830 GGGTTATCAGTTTTGTAACAGTCCG 60.107 44.000 0.00 0.00 36.70 4.79
371 383 0.391263 GTCCGCCTTCGTCTGGATTT 60.391 55.000 0.00 0.00 32.18 2.17
381 393 2.233922 TCGTCTGGATTTGGAACCTCTC 59.766 50.000 0.00 0.00 0.00 3.20
383 395 2.573915 GTCTGGATTTGGAACCTCTCCT 59.426 50.000 0.00 0.00 45.64 3.69
384 396 3.009584 GTCTGGATTTGGAACCTCTCCTT 59.990 47.826 0.00 0.00 45.64 3.36
385 397 4.225267 GTCTGGATTTGGAACCTCTCCTTA 59.775 45.833 0.00 0.00 45.64 2.69
386 398 5.039645 TCTGGATTTGGAACCTCTCCTTAT 58.960 41.667 0.00 0.00 45.64 1.73
387 399 5.492524 TCTGGATTTGGAACCTCTCCTTATT 59.507 40.000 0.00 0.00 45.64 1.40
388 400 6.011628 TCTGGATTTGGAACCTCTCCTTATTT 60.012 38.462 0.00 0.00 45.64 1.40
389 401 6.187682 TGGATTTGGAACCTCTCCTTATTTC 58.812 40.000 0.00 0.00 45.64 2.17
390 402 6.187682 GGATTTGGAACCTCTCCTTATTTCA 58.812 40.000 0.00 0.00 45.64 2.69
391 403 6.836007 GGATTTGGAACCTCTCCTTATTTCAT 59.164 38.462 0.00 0.00 45.64 2.57
392 404 7.998964 GGATTTGGAACCTCTCCTTATTTCATA 59.001 37.037 0.00 0.00 45.64 2.15
393 405 8.753497 ATTTGGAACCTCTCCTTATTTCATAC 57.247 34.615 0.00 0.00 45.64 2.39
394 406 6.884472 TGGAACCTCTCCTTATTTCATACA 57.116 37.500 0.00 0.00 45.64 2.29
395 407 6.889198 TGGAACCTCTCCTTATTTCATACAG 58.111 40.000 0.00 0.00 45.64 2.74
396 408 6.443849 TGGAACCTCTCCTTATTTCATACAGT 59.556 38.462 0.00 0.00 45.64 3.55
397 409 6.763610 GGAACCTCTCCTTATTTCATACAGTG 59.236 42.308 0.00 0.00 41.61 3.66
398 410 5.675538 ACCTCTCCTTATTTCATACAGTGC 58.324 41.667 0.00 0.00 0.00 4.40
399 411 5.189736 ACCTCTCCTTATTTCATACAGTGCA 59.810 40.000 0.00 0.00 0.00 4.57
400 412 6.126652 ACCTCTCCTTATTTCATACAGTGCAT 60.127 38.462 0.00 0.00 0.00 3.96
401 413 6.769822 CCTCTCCTTATTTCATACAGTGCATT 59.230 38.462 0.00 0.00 0.00 3.56
402 414 7.255035 CCTCTCCTTATTTCATACAGTGCATTG 60.255 40.741 7.79 7.79 0.00 2.82
403 415 6.543465 TCTCCTTATTTCATACAGTGCATTGG 59.457 38.462 14.25 0.00 0.00 3.16
429 441 3.320541 TGTCCGCAAATTTCTTGGTCATT 59.679 39.130 0.00 0.00 0.00 2.57
440 452 5.643379 TTCTTGGTCATTAATTGTCCTGC 57.357 39.130 0.00 0.00 34.91 4.85
442 454 2.364632 TGGTCATTAATTGTCCTGCCG 58.635 47.619 0.00 0.00 34.91 5.69
446 458 1.102978 ATTAATTGTCCTGCCGTGCC 58.897 50.000 0.00 0.00 0.00 5.01
451 463 4.329545 GTCCTGCCGTGCCCTCAA 62.330 66.667 0.00 0.00 0.00 3.02
483 567 6.012658 TGGTTCTACTTTTGTGCATTCATC 57.987 37.500 0.00 0.00 0.00 2.92
492 576 8.345724 ACTTTTGTGCATTCATCTCTCTTATT 57.654 30.769 0.00 0.00 0.00 1.40
493 577 9.453572 ACTTTTGTGCATTCATCTCTCTTATTA 57.546 29.630 0.00 0.00 0.00 0.98
496 580 8.613060 TTGTGCATTCATCTCTCTTATTATCC 57.387 34.615 0.00 0.00 0.00 2.59
497 581 7.738847 TGTGCATTCATCTCTCTTATTATCCA 58.261 34.615 0.00 0.00 0.00 3.41
498 582 8.380867 TGTGCATTCATCTCTCTTATTATCCAT 58.619 33.333 0.00 0.00 0.00 3.41
499 583 9.228949 GTGCATTCATCTCTCTTATTATCCATT 57.771 33.333 0.00 0.00 0.00 3.16
520 604 7.768582 TCCATTTGAATTCGTGATAGTGTATGT 59.231 33.333 0.04 0.00 0.00 2.29
537 621 6.151144 AGTGTATGTTTTACCTTTCATCAGCC 59.849 38.462 0.00 0.00 0.00 4.85
539 623 2.817258 TGTTTTACCTTTCATCAGCCGG 59.183 45.455 0.00 0.00 0.00 6.13
550 634 2.016318 CATCAGCCGGCTTTGTGAATA 58.984 47.619 30.60 5.05 0.00 1.75
558 642 2.757868 CGGCTTTGTGAATATTTCCCCA 59.242 45.455 0.00 0.00 0.00 4.96
569 659 7.339212 TGTGAATATTTCCCCAGTACTGAAATG 59.661 37.037 24.68 7.15 38.70 2.32
623 713 8.616076 GCTACTAAAATTCATAAGCTCACACAT 58.384 33.333 0.00 0.00 0.00 3.21
626 716 9.672673 ACTAAAATTCATAAGCTCACACATACT 57.327 29.630 0.00 0.00 0.00 2.12
628 718 7.559590 AAATTCATAAGCTCACACATACTCC 57.440 36.000 0.00 0.00 0.00 3.85
629 719 4.672587 TCATAAGCTCACACATACTCCC 57.327 45.455 0.00 0.00 0.00 4.30
630 720 4.290093 TCATAAGCTCACACATACTCCCT 58.710 43.478 0.00 0.00 0.00 4.20
631 721 4.342378 TCATAAGCTCACACATACTCCCTC 59.658 45.833 0.00 0.00 0.00 4.30
632 722 1.490574 AGCTCACACATACTCCCTCC 58.509 55.000 0.00 0.00 0.00 4.30
633 723 0.103208 GCTCACACATACTCCCTCCG 59.897 60.000 0.00 0.00 0.00 4.63
634 724 1.475403 CTCACACATACTCCCTCCGT 58.525 55.000 0.00 0.00 0.00 4.69
635 725 1.825474 CTCACACATACTCCCTCCGTT 59.175 52.381 0.00 0.00 0.00 4.44
636 726 1.822990 TCACACATACTCCCTCCGTTC 59.177 52.381 0.00 0.00 0.00 3.95
637 727 1.134788 CACACATACTCCCTCCGTTCC 60.135 57.143 0.00 0.00 0.00 3.62
638 728 0.464452 CACATACTCCCTCCGTTCCC 59.536 60.000 0.00 0.00 0.00 3.97
639 729 0.042131 ACATACTCCCTCCGTTCCCA 59.958 55.000 0.00 0.00 0.00 4.37
640 730 1.200519 CATACTCCCTCCGTTCCCAA 58.799 55.000 0.00 0.00 0.00 4.12
641 731 1.557832 CATACTCCCTCCGTTCCCAAA 59.442 52.381 0.00 0.00 0.00 3.28
642 732 1.961133 TACTCCCTCCGTTCCCAAAT 58.039 50.000 0.00 0.00 0.00 2.32
643 733 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
644 734 2.488836 ACTCCCTCCGTTCCCAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
645 735 3.660959 ACTCCCTCCGTTCCCAAATATA 58.339 45.455 0.00 0.00 0.00 0.86
646 736 4.042174 ACTCCCTCCGTTCCCAAATATAA 58.958 43.478 0.00 0.00 0.00 0.98
647 737 4.102681 ACTCCCTCCGTTCCCAAATATAAG 59.897 45.833 0.00 0.00 0.00 1.73
648 738 4.042174 TCCCTCCGTTCCCAAATATAAGT 58.958 43.478 0.00 0.00 0.00 2.24
649 739 5.218179 TCCCTCCGTTCCCAAATATAAGTA 58.782 41.667 0.00 0.00 0.00 2.24
650 740 5.847817 TCCCTCCGTTCCCAAATATAAGTAT 59.152 40.000 0.00 0.00 0.00 2.12
651 741 6.330778 TCCCTCCGTTCCCAAATATAAGTATT 59.669 38.462 0.00 0.00 31.89 1.89
652 742 7.002276 CCCTCCGTTCCCAAATATAAGTATTT 58.998 38.462 0.00 0.00 40.31 1.40
653 743 7.174426 CCCTCCGTTCCCAAATATAAGTATTTC 59.826 40.741 0.00 0.00 38.21 2.17
654 744 7.937394 CCTCCGTTCCCAAATATAAGTATTTCT 59.063 37.037 0.00 0.00 38.21 2.52
655 745 9.991906 CTCCGTTCCCAAATATAAGTATTTCTA 57.008 33.333 0.00 0.00 38.21 2.10
656 746 9.991906 TCCGTTCCCAAATATAAGTATTTCTAG 57.008 33.333 0.00 0.00 38.21 2.43
657 747 9.991906 CCGTTCCCAAATATAAGTATTTCTAGA 57.008 33.333 0.00 0.00 38.21 2.43
670 760 7.741554 AGTATTTCTAGAGATTCCACCAAGT 57.258 36.000 0.42 0.00 0.00 3.16
671 761 7.560368 AGTATTTCTAGAGATTCCACCAAGTG 58.440 38.462 0.42 0.00 0.00 3.16
672 762 6.627087 ATTTCTAGAGATTCCACCAAGTGA 57.373 37.500 0.00 0.00 35.23 3.41
673 763 5.407407 TTCTAGAGATTCCACCAAGTGAC 57.593 43.478 0.00 0.00 35.23 3.67
674 764 4.678256 TCTAGAGATTCCACCAAGTGACT 58.322 43.478 0.00 0.00 35.23 3.41
675 765 5.827756 TCTAGAGATTCCACCAAGTGACTA 58.172 41.667 0.00 0.00 35.23 2.59
676 766 4.810191 AGAGATTCCACCAAGTGACTAC 57.190 45.455 0.00 0.00 35.23 2.73
677 767 4.160329 AGAGATTCCACCAAGTGACTACA 58.840 43.478 0.00 0.00 35.23 2.74
678 768 4.780021 AGAGATTCCACCAAGTGACTACAT 59.220 41.667 0.00 0.00 35.23 2.29
679 769 5.958380 AGAGATTCCACCAAGTGACTACATA 59.042 40.000 0.00 0.00 35.23 2.29
680 770 5.978814 AGATTCCACCAAGTGACTACATAC 58.021 41.667 0.00 0.00 35.23 2.39
681 771 3.861276 TCCACCAAGTGACTACATACG 57.139 47.619 0.00 0.00 35.23 3.06
682 772 2.494471 TCCACCAAGTGACTACATACGG 59.506 50.000 0.00 0.00 35.23 4.02
683 773 2.494471 CCACCAAGTGACTACATACGGA 59.506 50.000 0.00 0.00 35.23 4.69
684 774 3.428999 CCACCAAGTGACTACATACGGAG 60.429 52.174 0.00 0.00 35.23 4.63
685 775 3.192844 CACCAAGTGACTACATACGGAGT 59.807 47.826 0.00 0.00 39.53 3.85
686 776 4.397103 CACCAAGTGACTACATACGGAGTA 59.603 45.833 0.00 0.00 41.29 2.59
687 777 5.106038 CACCAAGTGACTACATACGGAGTAA 60.106 44.000 0.00 0.00 40.69 2.24
688 778 6.570957 CACCAAGTGACTACATACGGAGTAAA 60.571 42.308 0.00 0.00 40.69 2.01
689 779 8.001851 CACCAAGTGACTACATACGGAGTAAAA 61.002 40.741 0.00 0.00 40.69 1.52
703 793 6.931838 ACGGAGTAAAATGAGTGAATCTACA 58.068 36.000 0.00 0.00 41.94 2.74
704 794 6.812160 ACGGAGTAAAATGAGTGAATCTACAC 59.188 38.462 0.00 0.00 41.94 2.90
719 809 9.856488 GTGAATCTACACTCTAAAATGTCTACA 57.144 33.333 0.00 0.00 37.73 2.74
727 817 7.921214 ACACTCTAAAATGTCTACATACATCCG 59.079 37.037 0.00 0.00 39.16 4.18
728 818 7.921214 CACTCTAAAATGTCTACATACATCCGT 59.079 37.037 0.00 0.00 39.16 4.69
729 819 9.128404 ACTCTAAAATGTCTACATACATCCGTA 57.872 33.333 0.00 0.00 39.16 4.02
742 832 7.905604 CATACATCCGTATGTTGTATTCCAT 57.094 36.000 0.00 0.00 46.70 3.41
743 833 8.322906 CATACATCCGTATGTTGTATTCCATT 57.677 34.615 0.00 0.00 46.70 3.16
744 834 8.783093 CATACATCCGTATGTTGTATTCCATTT 58.217 33.333 0.00 0.00 46.70 2.32
745 835 7.026631 ACATCCGTATGTTGTATTCCATTTG 57.973 36.000 0.00 0.00 44.07 2.32
746 836 6.826231 ACATCCGTATGTTGTATTCCATTTGA 59.174 34.615 0.00 0.00 44.07 2.69
747 837 7.338196 ACATCCGTATGTTGTATTCCATTTGAA 59.662 33.333 0.00 0.00 44.07 2.69
748 838 7.689446 TCCGTATGTTGTATTCCATTTGAAA 57.311 32.000 0.00 0.00 36.33 2.69
749 839 8.287439 TCCGTATGTTGTATTCCATTTGAAAT 57.713 30.769 0.00 0.00 36.33 2.17
750 840 8.187480 TCCGTATGTTGTATTCCATTTGAAATG 58.813 33.333 10.84 10.84 36.33 2.32
751 841 7.973388 CCGTATGTTGTATTCCATTTGAAATGT 59.027 33.333 15.93 1.43 36.33 2.71
752 842 9.009327 CGTATGTTGTATTCCATTTGAAATGTC 57.991 33.333 15.93 3.21 36.33 3.06
781 871 9.788889 AAAATACTTATATTTAGGAACGGAGGG 57.211 33.333 0.00 0.00 39.61 4.30
782 872 8.731591 AATACTTATATTTAGGAACGGAGGGA 57.268 34.615 0.00 0.00 0.00 4.20
783 873 6.667558 ACTTATATTTAGGAACGGAGGGAG 57.332 41.667 0.00 0.00 0.00 4.30
788 878 3.744940 TTAGGAACGGAGGGAGTAGAA 57.255 47.619 0.00 0.00 0.00 2.10
790 880 1.076677 AGGAACGGAGGGAGTAGAACA 59.923 52.381 0.00 0.00 0.00 3.18
802 892 7.664318 GGAGGGAGTAGAACATTGTTCTTTTTA 59.336 37.037 31.04 14.81 0.00 1.52
816 906 9.936759 ATTGTTCTTTTTAAGACAGTTTTTCCA 57.063 25.926 0.00 0.00 37.23 3.53
827 917 3.190535 ACAGTTTTTCCATCGTGTATGCC 59.809 43.478 0.00 0.00 33.92 4.40
828 918 3.190327 CAGTTTTTCCATCGTGTATGCCA 59.810 43.478 0.00 0.00 33.92 4.92
918 1009 5.465724 GGCAATATTCTCCTTTAGTGTACCG 59.534 44.000 0.00 0.00 0.00 4.02
929 1020 1.804601 AGTGTACCGCTAAGTTTGCC 58.195 50.000 3.67 0.00 0.00 4.52
943 1034 5.727243 AAGTTTGCCCAGGGTATAATACT 57.273 39.130 7.55 1.53 0.00 2.12
946 1037 8.514533 AAGTTTGCCCAGGGTATAATACTATA 57.485 34.615 7.55 0.00 0.00 1.31
947 1038 8.514533 AGTTTGCCCAGGGTATAATACTATAA 57.485 34.615 7.55 0.00 0.00 0.98
948 1039 9.124104 AGTTTGCCCAGGGTATAATACTATAAT 57.876 33.333 7.55 0.00 0.00 1.28
949 1040 9.749340 GTTTGCCCAGGGTATAATACTATAATT 57.251 33.333 7.55 0.00 0.00 1.40
951 1042 8.688222 TGCCCAGGGTATAATACTATAATTCA 57.312 34.615 7.55 0.00 0.00 2.57
994 1091 6.518200 GCTGAGATGAATAGGGAAAGTAGAGG 60.518 46.154 0.00 0.00 0.00 3.69
1000 1097 7.324388 TGAATAGGGAAAGTAGAGGAAAACA 57.676 36.000 0.00 0.00 0.00 2.83
1006 1103 3.746045 AAGTAGAGGAAAACAGCGACA 57.254 42.857 0.00 0.00 0.00 4.35
1013 1110 4.819630 AGAGGAAAACAGCGACATTTGTTA 59.180 37.500 0.00 0.00 36.56 2.41
1017 1114 6.430000 AGGAAAACAGCGACATTTGTTACTAT 59.570 34.615 0.00 0.00 36.56 2.12
1018 1115 7.040686 AGGAAAACAGCGACATTTGTTACTATT 60.041 33.333 0.00 0.00 36.56 1.73
1104 1201 9.720769 ATACTATATGTTCCGTTTTATTCCCTG 57.279 33.333 0.00 0.00 0.00 4.45
1156 1258 6.161855 TCAATGTACAGAACTGAGTGAACT 57.838 37.500 8.87 0.00 0.00 3.01
1157 1259 7.284919 TCAATGTACAGAACTGAGTGAACTA 57.715 36.000 8.87 0.00 0.00 2.24
1163 1265 4.934001 ACAGAACTGAGTGAACTATGCATG 59.066 41.667 10.16 1.82 0.00 4.06
1164 1266 4.934001 CAGAACTGAGTGAACTATGCATGT 59.066 41.667 10.16 2.51 0.00 3.21
1165 1267 6.101997 CAGAACTGAGTGAACTATGCATGTA 58.898 40.000 10.16 0.00 0.00 2.29
1166 1268 6.035435 CAGAACTGAGTGAACTATGCATGTAC 59.965 42.308 10.16 2.23 0.00 2.90
1167 1269 5.667539 ACTGAGTGAACTATGCATGTACT 57.332 39.130 10.16 6.89 0.00 2.73
1168 1270 5.655488 ACTGAGTGAACTATGCATGTACTC 58.345 41.667 10.16 14.80 35.02 2.59
1169 1271 5.011090 TGAGTGAACTATGCATGTACTCC 57.989 43.478 10.16 0.00 33.88 3.85
1170 1272 4.141937 TGAGTGAACTATGCATGTACTCCC 60.142 45.833 10.16 0.00 33.88 4.30
1171 1273 4.033709 AGTGAACTATGCATGTACTCCCT 58.966 43.478 10.16 0.00 0.00 4.20
1172 1274 4.100189 AGTGAACTATGCATGTACTCCCTC 59.900 45.833 10.16 0.27 0.00 4.30
1173 1275 3.388024 TGAACTATGCATGTACTCCCTCC 59.612 47.826 10.16 0.00 0.00 4.30
1174 1276 1.964223 ACTATGCATGTACTCCCTCCG 59.036 52.381 10.16 0.00 0.00 4.63
1175 1277 1.964223 CTATGCATGTACTCCCTCCGT 59.036 52.381 10.16 0.00 0.00 4.69
1176 1278 1.204146 ATGCATGTACTCCCTCCGTT 58.796 50.000 0.00 0.00 0.00 4.44
1177 1279 0.535335 TGCATGTACTCCCTCCGTTC 59.465 55.000 0.00 0.00 0.00 3.95
1178 1280 0.179081 GCATGTACTCCCTCCGTTCC 60.179 60.000 0.00 0.00 0.00 3.62
1179 1281 1.486211 CATGTACTCCCTCCGTTCCT 58.514 55.000 0.00 0.00 0.00 3.36
1180 1282 2.662866 CATGTACTCCCTCCGTTCCTA 58.337 52.381 0.00 0.00 0.00 2.94
1181 1283 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
1182 1284 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
1183 1285 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
1184 1286 3.449737 TGTACTCCCTCCGTTCCTAAATG 59.550 47.826 0.00 0.00 0.00 2.32
1185 1287 2.547990 ACTCCCTCCGTTCCTAAATGT 58.452 47.619 0.00 0.00 0.00 2.71
1186 1288 3.716431 ACTCCCTCCGTTCCTAAATGTA 58.284 45.455 0.00 0.00 0.00 2.29
1187 1289 4.098894 ACTCCCTCCGTTCCTAAATGTAA 58.901 43.478 0.00 0.00 0.00 2.41
1188 1290 4.161754 ACTCCCTCCGTTCCTAAATGTAAG 59.838 45.833 0.00 0.00 0.00 2.34
1189 1291 4.098894 TCCCTCCGTTCCTAAATGTAAGT 58.901 43.478 0.00 0.00 0.00 2.24
1190 1292 4.161001 TCCCTCCGTTCCTAAATGTAAGTC 59.839 45.833 0.00 0.00 0.00 3.01
1191 1293 4.161754 CCCTCCGTTCCTAAATGTAAGTCT 59.838 45.833 0.00 0.00 0.00 3.24
1192 1294 5.338137 CCCTCCGTTCCTAAATGTAAGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
1193 1295 6.171213 CCTCCGTTCCTAAATGTAAGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
1194 1296 6.653740 CCTCCGTTCCTAAATGTAAGTCTTTT 59.346 38.462 0.00 0.00 0.00 2.27
1195 1297 7.174426 CCTCCGTTCCTAAATGTAAGTCTTTTT 59.826 37.037 0.00 0.00 0.00 1.94
1196 1298 9.211485 CTCCGTTCCTAAATGTAAGTCTTTTTA 57.789 33.333 0.00 0.00 0.00 1.52
1197 1299 9.211485 TCCGTTCCTAAATGTAAGTCTTTTTAG 57.789 33.333 7.75 7.75 0.00 1.85
1198 1300 9.211485 CCGTTCCTAAATGTAAGTCTTTTTAGA 57.789 33.333 13.43 2.40 0.00 2.10
1224 1326 5.977489 TCCAATATGGACTACATACGGAG 57.023 43.478 0.00 0.00 42.67 4.63
1225 1327 4.219944 TCCAATATGGACTACATACGGAGC 59.780 45.833 0.00 0.00 42.67 4.70
1226 1328 4.021456 CCAATATGGACTACATACGGAGCA 60.021 45.833 0.00 0.00 44.41 4.26
1227 1329 5.510690 CCAATATGGACTACATACGGAGCAA 60.511 44.000 0.00 0.00 44.41 3.91
1228 1330 5.801531 ATATGGACTACATACGGAGCAAA 57.198 39.130 0.00 0.00 44.41 3.68
1229 1331 3.965379 TGGACTACATACGGAGCAAAA 57.035 42.857 0.00 0.00 0.00 2.44
1230 1332 4.274602 TGGACTACATACGGAGCAAAAA 57.725 40.909 0.00 0.00 0.00 1.94
1231 1333 4.839121 TGGACTACATACGGAGCAAAAAT 58.161 39.130 0.00 0.00 0.00 1.82
1232 1334 5.250200 TGGACTACATACGGAGCAAAAATT 58.750 37.500 0.00 0.00 0.00 1.82
1233 1335 5.123186 TGGACTACATACGGAGCAAAAATTG 59.877 40.000 0.00 0.00 0.00 2.32
1251 1353 9.801714 CAAAAATTGCAAAATGAGTGAATCTAC 57.198 29.630 1.71 0.00 0.00 2.59
1252 1354 9.545105 AAAAATTGCAAAATGAGTGAATCTACA 57.455 25.926 1.71 0.00 0.00 2.74
1253 1355 8.524870 AAATTGCAAAATGAGTGAATCTACAC 57.475 30.769 1.71 0.00 40.60 2.90
1295 1397 6.911250 ACATCCGTATGTAGTCCATATTGA 57.089 37.500 0.00 0.00 44.66 2.57
1296 1398 7.297936 ACATCCGTATGTAGTCCATATTGAA 57.702 36.000 0.00 0.00 44.66 2.69
1297 1399 7.732025 ACATCCGTATGTAGTCCATATTGAAA 58.268 34.615 0.00 0.00 44.66 2.69
1298 1400 8.375506 ACATCCGTATGTAGTCCATATTGAAAT 58.624 33.333 0.00 0.00 44.66 2.17
1299 1401 8.873830 CATCCGTATGTAGTCCATATTGAAATC 58.126 37.037 0.00 0.00 38.29 2.17
1300 1402 8.190326 TCCGTATGTAGTCCATATTGAAATCT 57.810 34.615 0.00 0.00 38.29 2.40
1301 1403 8.304596 TCCGTATGTAGTCCATATTGAAATCTC 58.695 37.037 0.00 0.00 38.29 2.75
1302 1404 8.307483 CCGTATGTAGTCCATATTGAAATCTCT 58.693 37.037 0.00 0.00 38.29 3.10
1310 1412 9.620259 AGTCCATATTGAAATCTCTAAAAGGAC 57.380 33.333 0.00 0.00 39.53 3.85
1311 1413 9.620259 GTCCATATTGAAATCTCTAAAAGGACT 57.380 33.333 0.00 0.00 37.06 3.85
1328 1430 8.959705 AAAAGGACTTATATTTAGGAACGGAG 57.040 34.615 0.00 0.00 0.00 4.63
1329 1431 6.667558 AGGACTTATATTTAGGAACGGAGG 57.332 41.667 0.00 0.00 0.00 4.30
1330 1432 6.379579 AGGACTTATATTTAGGAACGGAGGA 58.620 40.000 0.00 0.00 0.00 3.71
1349 1453 9.852091 ACGGAGGAAGTATATTATTAACGATTC 57.148 33.333 0.00 0.00 0.00 2.52
1365 1469 8.897872 TTAACGATTCCTCAAGACTAAACTTT 57.102 30.769 0.00 0.00 0.00 2.66
1366 1470 6.787085 ACGATTCCTCAAGACTAAACTTTG 57.213 37.500 0.00 0.00 0.00 2.77
1367 1471 5.179555 ACGATTCCTCAAGACTAAACTTTGC 59.820 40.000 0.00 0.00 0.00 3.68
1368 1472 5.179368 CGATTCCTCAAGACTAAACTTTGCA 59.821 40.000 0.00 0.00 0.00 4.08
1399 1645 0.663153 GTGTGGCACCTTGTTCTGTC 59.337 55.000 16.26 0.00 0.00 3.51
1407 1653 3.184581 GCACCTTGTTCTGTCTAAACGAG 59.815 47.826 0.00 0.00 37.71 4.18
1420 1666 5.522460 TGTCTAAACGAGGTATTTATGCAGC 59.478 40.000 0.00 0.00 0.00 5.25
1491 1739 7.741785 TCTTTCTACTACCTGGAATTGTTGAA 58.258 34.615 0.00 3.75 0.00 2.69
1493 1741 8.754991 TTTCTACTACCTGGAATTGTTGAAAA 57.245 30.769 0.00 0.00 32.69 2.29
1494 1742 8.754991 TTCTACTACCTGGAATTGTTGAAAAA 57.245 30.769 0.00 0.00 0.00 1.94
1495 1743 8.161699 TCTACTACCTGGAATTGTTGAAAAAC 57.838 34.615 0.00 0.00 0.00 2.43
1496 1744 5.827666 ACTACCTGGAATTGTTGAAAAACG 58.172 37.500 0.00 0.00 0.00 3.60
1590 1840 4.391830 GGAATGCGTATCTTTGTCAAGACA 59.608 41.667 0.00 0.00 42.05 3.41
1704 1955 1.419387 GATGGGGTGCAGCTAGAAGAT 59.581 52.381 16.65 0.00 0.00 2.40
1793 2044 3.733960 CGTGACAGAGACGCGGGA 61.734 66.667 12.47 0.00 37.56 5.14
1912 2164 1.474077 GCCTCATCTTCGCCAACAAAT 59.526 47.619 0.00 0.00 0.00 2.32
1919 2171 1.133025 CTTCGCCAACAAATAGCTGGG 59.867 52.381 0.00 0.00 33.91 4.45
1981 2233 0.898789 GTCCACCCTTCTCCTCGTCA 60.899 60.000 0.00 0.00 0.00 4.35
2025 2277 6.283694 AGAAAGTAGAATGATGCGCATCTTA 58.716 36.000 40.90 27.82 38.60 2.10
2037 2289 2.794981 GCGCATCTTAGTGAAGACGCTA 60.795 50.000 0.30 0.00 46.35 4.26
2159 2411 0.033405 ATCATCTTTGCTGGCAGGCT 60.033 50.000 17.64 0.00 0.00 4.58
2222 4896 2.222027 CGAGGATACCCTTGATTTGGC 58.778 52.381 0.00 0.00 45.27 4.52
2224 4898 1.133792 AGGATACCCTTGATTTGGCGG 60.134 52.381 0.00 0.00 40.78 6.13
2304 4980 2.044123 GGAGCCTTCCTTACATGGTG 57.956 55.000 0.00 0.00 40.58 4.17
2305 4981 1.383523 GAGCCTTCCTTACATGGTGC 58.616 55.000 0.00 0.00 0.00 5.01
2452 5164 9.950680 ATGTTAATGTGTTTGAGTAGTTTCTTG 57.049 29.630 0.00 0.00 0.00 3.02
2490 5203 8.373220 CAAGAGGAACTACTTTAAAAGTCCCTA 58.627 37.037 0.00 0.00 41.55 3.53
2501 5214 9.330220 ACTTTAAAAGTCCCTAGGTCTGTATTA 57.670 33.333 8.29 4.69 37.02 0.98
2507 5220 5.946972 AGTCCCTAGGTCTGTATTATCATCG 59.053 44.000 8.29 0.00 0.00 3.84
2540 5253 5.877012 AGAATACAGTCTGTATGCAGTTTGG 59.123 40.000 26.43 2.45 42.29 3.28
2543 5260 1.073763 AGTCTGTATGCAGTTTGGCCA 59.926 47.619 0.00 0.00 43.05 5.36
2564 5281 5.578336 GCCAACAAATAGCCTCATTTCTTTC 59.422 40.000 0.00 0.00 0.00 2.62
2567 5284 7.122650 CCAACAAATAGCCTCATTTCTTTCCTA 59.877 37.037 0.00 0.00 0.00 2.94
2568 5285 7.872113 ACAAATAGCCTCATTTCTTTCCTAG 57.128 36.000 0.00 0.00 0.00 3.02
2588 5329 6.046593 CCTAGTGCGGTTAATTTCTGTATCA 58.953 40.000 0.00 0.00 0.00 2.15
2597 5338 8.785101 CGGTTAATTTCTGTATCAATGTTTTCG 58.215 33.333 0.00 0.00 0.00 3.46
2613 5354 6.223138 TGTTTTCGTCTATGTCATCACAAC 57.777 37.500 0.00 0.00 35.64 3.32
2614 5355 5.178623 TGTTTTCGTCTATGTCATCACAACC 59.821 40.000 0.00 0.00 35.64 3.77
2640 5381 5.860941 AGTTGAAGTGATGAGGATCGTAT 57.139 39.130 0.00 0.00 38.61 3.06
2652 5393 3.722147 AGGATCGTATCACTGTGATTGC 58.278 45.455 26.56 18.30 38.26 3.56
2657 5398 3.865164 TCGTATCACTGTGATTGCATGTC 59.135 43.478 26.56 9.28 38.26 3.06
2660 5401 4.959596 ATCACTGTGATTGCATGTCTTC 57.040 40.909 17.24 0.00 32.13 2.87
2667 5408 7.064966 CACTGTGATTGCATGTCTTCTACAATA 59.935 37.037 0.32 0.00 42.70 1.90
2671 5412 9.793252 GTGATTGCATGTCTTCTACAATAAAAT 57.207 29.630 0.00 0.00 42.70 1.82
2707 5449 2.547634 TGTGAACCACATGAATGTCACG 59.452 45.455 0.00 0.00 39.62 4.35
2713 5455 2.807967 CCACATGAATGTCACGTGAGTT 59.192 45.455 20.73 16.79 42.54 3.01
2733 5475 5.324409 AGTTGGAATCAGGACTGCAAATAA 58.676 37.500 0.00 0.00 0.00 1.40
2755 5497 3.665190 GAGTTGAAATCAAGTCGACCCT 58.335 45.455 13.01 0.00 43.70 4.34
2756 5498 3.403038 AGTTGAAATCAAGTCGACCCTG 58.597 45.455 13.01 10.44 34.64 4.45
2757 5499 1.808411 TGAAATCAAGTCGACCCTGC 58.192 50.000 13.01 0.00 0.00 4.85
2759 5501 0.322546 AAATCAAGTCGACCCTGCCC 60.323 55.000 13.01 0.00 0.00 5.36
2760 5502 1.201429 AATCAAGTCGACCCTGCCCT 61.201 55.000 13.01 0.00 0.00 5.19
2761 5503 1.201429 ATCAAGTCGACCCTGCCCTT 61.201 55.000 13.01 0.00 0.00 3.95
2762 5504 1.672356 CAAGTCGACCCTGCCCTTG 60.672 63.158 13.01 4.45 0.00 3.61
2763 5505 3.553095 AAGTCGACCCTGCCCTTGC 62.553 63.158 13.01 0.00 38.26 4.01
2764 5506 4.021925 GTCGACCCTGCCCTTGCT 62.022 66.667 3.51 0.00 38.71 3.91
2765 5507 4.020617 TCGACCCTGCCCTTGCTG 62.021 66.667 0.00 0.00 38.71 4.41
2766 5508 4.335647 CGACCCTGCCCTTGCTGT 62.336 66.667 0.00 0.00 38.71 4.40
2767 5509 2.116125 GACCCTGCCCTTGCTGTT 59.884 61.111 0.00 0.00 38.71 3.16
2768 5510 2.203538 ACCCTGCCCTTGCTGTTG 60.204 61.111 0.00 0.00 38.71 3.33
2769 5511 2.993264 CCCTGCCCTTGCTGTTGG 60.993 66.667 0.00 0.00 38.71 3.77
2770 5512 2.115910 CCTGCCCTTGCTGTTGGA 59.884 61.111 0.00 0.00 38.71 3.53
2771 5513 1.975407 CCTGCCCTTGCTGTTGGAG 60.975 63.158 0.00 0.00 38.71 3.86
2772 5514 1.975407 CTGCCCTTGCTGTTGGAGG 60.975 63.158 0.00 0.00 38.71 4.30
2773 5515 2.416107 CTGCCCTTGCTGTTGGAGGA 62.416 60.000 0.00 0.00 38.71 3.71
2774 5516 1.676967 GCCCTTGCTGTTGGAGGAG 60.677 63.158 0.00 0.00 32.11 3.69
2775 5517 1.001641 CCCTTGCTGTTGGAGGAGG 60.002 63.158 0.00 0.00 32.11 4.30
2776 5518 1.492133 CCCTTGCTGTTGGAGGAGGA 61.492 60.000 0.00 0.00 32.11 3.71
2777 5519 0.622665 CCTTGCTGTTGGAGGAGGAT 59.377 55.000 0.00 0.00 32.11 3.24
2778 5520 1.681166 CCTTGCTGTTGGAGGAGGATG 60.681 57.143 0.00 0.00 32.11 3.51
2779 5521 0.329261 TTGCTGTTGGAGGAGGATGG 59.671 55.000 0.00 0.00 0.00 3.51
2780 5522 1.452833 GCTGTTGGAGGAGGATGGC 60.453 63.158 0.00 0.00 0.00 4.40
2781 5523 1.153289 CTGTTGGAGGAGGATGGCG 60.153 63.158 0.00 0.00 0.00 5.69
2782 5524 2.190578 GTTGGAGGAGGATGGCGG 59.809 66.667 0.00 0.00 0.00 6.13
2783 5525 3.797353 TTGGAGGAGGATGGCGGC 61.797 66.667 0.00 0.00 0.00 6.53
2785 5527 4.247380 GGAGGAGGATGGCGGCAG 62.247 72.222 19.29 0.00 0.00 4.85
2786 5528 4.247380 GAGGAGGATGGCGGCAGG 62.247 72.222 19.29 0.00 0.00 4.85
2787 5529 4.804420 AGGAGGATGGCGGCAGGA 62.804 66.667 19.29 0.00 0.00 3.86
2788 5530 3.564218 GGAGGATGGCGGCAGGAT 61.564 66.667 19.29 4.92 0.00 3.24
2789 5531 2.281345 GAGGATGGCGGCAGGATG 60.281 66.667 19.29 0.00 40.87 3.51
2790 5532 2.769621 AGGATGGCGGCAGGATGA 60.770 61.111 19.29 0.00 39.69 2.92
2791 5533 2.592861 GGATGGCGGCAGGATGAC 60.593 66.667 19.29 4.34 44.64 3.06
2792 5534 2.592861 GATGGCGGCAGGATGACC 60.593 66.667 19.29 0.00 46.22 4.02
2835 5577 1.700186 GAGGAGGACAAGGAGGTGTTT 59.300 52.381 0.00 0.00 0.00 2.83
3202 5944 2.280079 GGGGGATTTGGGAGGCAG 59.720 66.667 0.00 0.00 0.00 4.85
3203 5945 2.442830 GGGGATTTGGGAGGCAGC 60.443 66.667 0.00 0.00 0.00 5.25
3204 5946 2.830370 GGGATTTGGGAGGCAGCG 60.830 66.667 0.00 0.00 0.00 5.18
3206 5948 2.115291 GGATTTGGGAGGCAGCGTC 61.115 63.158 6.55 6.55 0.00 5.19
3220 5962 0.036294 AGCGTCTAGGGTTTGAAGGC 60.036 55.000 0.00 0.00 0.00 4.35
3221 5963 0.321298 GCGTCTAGGGTTTGAAGGCA 60.321 55.000 0.00 0.00 0.00 4.75
3225 5967 3.536570 GTCTAGGGTTTGAAGGCAGATC 58.463 50.000 0.00 0.00 0.00 2.75
3236 5978 2.106683 GGCAGATCGGTGTTTCGGG 61.107 63.158 0.00 0.00 0.00 5.14
3238 5980 1.594833 CAGATCGGTGTTTCGGGGA 59.405 57.895 0.00 0.00 0.00 4.81
3304 6046 2.813908 GCGGAGGCAAGTGGTACG 60.814 66.667 0.00 0.00 39.62 3.67
3305 6047 2.813908 CGGAGGCAAGTGGTACGC 60.814 66.667 0.00 0.00 40.45 4.42
3312 6054 1.500512 GCAAGTGGTACGCCGACAAA 61.501 55.000 0.00 0.00 41.54 2.83
3315 6057 1.005867 GTGGTACGCCGACAAAGGA 60.006 57.895 0.00 0.00 37.67 3.36
3321 6063 4.954933 GCCGACAAAGGATAGGCA 57.045 55.556 0.00 0.00 46.48 4.75
3322 6064 2.695314 GCCGACAAAGGATAGGCAG 58.305 57.895 0.00 0.00 46.48 4.85
3323 6065 0.815615 GCCGACAAAGGATAGGCAGG 60.816 60.000 0.00 0.00 46.48 4.85
3324 6066 0.179045 CCGACAAAGGATAGGCAGGG 60.179 60.000 0.00 0.00 0.00 4.45
3325 6067 0.541863 CGACAAAGGATAGGCAGGGT 59.458 55.000 0.00 0.00 0.00 4.34
3326 6068 1.065418 CGACAAAGGATAGGCAGGGTT 60.065 52.381 0.00 0.00 0.00 4.11
3327 6069 2.618045 CGACAAAGGATAGGCAGGGTTT 60.618 50.000 0.00 0.00 0.00 3.27
3328 6070 3.017442 GACAAAGGATAGGCAGGGTTTC 58.983 50.000 0.00 0.00 0.00 2.78
3329 6071 2.291605 ACAAAGGATAGGCAGGGTTTCC 60.292 50.000 0.00 0.00 0.00 3.13
3330 6072 0.546598 AAGGATAGGCAGGGTTTCCG 59.453 55.000 0.00 0.00 38.33 4.30
3331 6073 0.326238 AGGATAGGCAGGGTTTCCGA 60.326 55.000 0.00 0.00 38.33 4.55
3332 6074 0.544697 GGATAGGCAGGGTTTCCGAA 59.455 55.000 0.00 0.00 38.33 4.30
3333 6075 1.143073 GGATAGGCAGGGTTTCCGAAT 59.857 52.381 0.00 0.00 38.33 3.34
3334 6076 2.370849 GGATAGGCAGGGTTTCCGAATA 59.629 50.000 0.00 0.00 38.33 1.75
3335 6077 3.181448 GGATAGGCAGGGTTTCCGAATAA 60.181 47.826 0.00 0.00 38.33 1.40
3336 6078 2.891191 AGGCAGGGTTTCCGAATAAA 57.109 45.000 0.00 0.00 38.33 1.40
3337 6079 2.723273 AGGCAGGGTTTCCGAATAAAG 58.277 47.619 0.00 0.00 38.33 1.85
3338 6080 2.307686 AGGCAGGGTTTCCGAATAAAGA 59.692 45.455 0.00 0.00 38.33 2.52
3339 6081 3.086282 GGCAGGGTTTCCGAATAAAGAA 58.914 45.455 0.00 0.00 38.33 2.52
3340 6082 3.699538 GGCAGGGTTTCCGAATAAAGAAT 59.300 43.478 0.00 0.00 38.33 2.40
3341 6083 4.440112 GGCAGGGTTTCCGAATAAAGAATG 60.440 45.833 0.00 0.00 38.33 2.67
3342 6084 4.157840 GCAGGGTTTCCGAATAAAGAATGT 59.842 41.667 0.00 0.00 38.33 2.71
3343 6085 5.336451 GCAGGGTTTCCGAATAAAGAATGTT 60.336 40.000 0.00 0.00 38.33 2.71
3344 6086 6.687604 CAGGGTTTCCGAATAAAGAATGTTT 58.312 36.000 0.00 0.00 38.33 2.83
3345 6087 7.151976 CAGGGTTTCCGAATAAAGAATGTTTT 58.848 34.615 0.00 0.00 38.33 2.43
3346 6088 7.116233 CAGGGTTTCCGAATAAAGAATGTTTTG 59.884 37.037 0.00 0.00 38.33 2.44
3347 6089 6.367695 GGGTTTCCGAATAAAGAATGTTTTGG 59.632 38.462 0.00 0.00 0.00 3.28
3348 6090 6.926826 GGTTTCCGAATAAAGAATGTTTTGGT 59.073 34.615 0.00 0.00 0.00 3.67
3349 6091 7.115805 GGTTTCCGAATAAAGAATGTTTTGGTC 59.884 37.037 0.00 0.00 0.00 4.02
3350 6092 6.885952 TCCGAATAAAGAATGTTTTGGTCA 57.114 33.333 0.00 0.00 0.00 4.02
3351 6093 7.278461 TCCGAATAAAGAATGTTTTGGTCAA 57.722 32.000 0.00 0.00 0.00 3.18
3352 6094 7.717568 TCCGAATAAAGAATGTTTTGGTCAAA 58.282 30.769 0.00 0.00 0.00 2.69
3353 6095 8.364142 TCCGAATAAAGAATGTTTTGGTCAAAT 58.636 29.630 0.00 0.00 0.00 2.32
3354 6096 8.987890 CCGAATAAAGAATGTTTTGGTCAAATT 58.012 29.630 0.00 0.00 0.00 1.82
3360 6102 7.319142 AGAATGTTTTGGTCAAATTTGTTGG 57.681 32.000 17.47 0.00 0.00 3.77
3361 6103 6.318396 AGAATGTTTTGGTCAAATTTGTTGGG 59.682 34.615 17.47 0.00 0.00 4.12
3362 6104 5.165961 TGTTTTGGTCAAATTTGTTGGGA 57.834 34.783 17.47 0.00 0.00 4.37
3363 6105 5.560724 TGTTTTGGTCAAATTTGTTGGGAA 58.439 33.333 17.47 6.53 0.00 3.97
3364 6106 6.003950 TGTTTTGGTCAAATTTGTTGGGAAA 58.996 32.000 17.47 10.48 0.00 3.13
3365 6107 6.660949 TGTTTTGGTCAAATTTGTTGGGAAAT 59.339 30.769 17.47 0.00 0.00 2.17
3366 6108 7.829211 TGTTTTGGTCAAATTTGTTGGGAAATA 59.171 29.630 17.47 9.17 0.00 1.40
3367 6109 8.341903 GTTTTGGTCAAATTTGTTGGGAAATAG 58.658 33.333 17.47 0.00 0.00 1.73
3368 6110 6.739331 TGGTCAAATTTGTTGGGAAATAGT 57.261 33.333 17.47 0.00 0.00 2.12
3369 6111 7.130681 TGGTCAAATTTGTTGGGAAATAGTT 57.869 32.000 17.47 0.00 0.00 2.24
3370 6112 7.569240 TGGTCAAATTTGTTGGGAAATAGTTT 58.431 30.769 17.47 0.00 0.00 2.66
3371 6113 7.713073 TGGTCAAATTTGTTGGGAAATAGTTTC 59.287 33.333 17.47 0.00 38.94 2.78
3372 6114 7.713073 GGTCAAATTTGTTGGGAAATAGTTTCA 59.287 33.333 17.47 0.00 41.43 2.69
3373 6115 8.764287 GTCAAATTTGTTGGGAAATAGTTTCAG 58.236 33.333 17.47 0.00 41.43 3.02
3374 6116 8.700051 TCAAATTTGTTGGGAAATAGTTTCAGA 58.300 29.630 17.47 0.00 41.43 3.27
3375 6117 8.981647 CAAATTTGTTGGGAAATAGTTTCAGAG 58.018 33.333 10.15 0.00 41.43 3.35
3376 6118 6.648879 TTTGTTGGGAAATAGTTTCAGAGG 57.351 37.500 4.98 0.00 41.43 3.69
3377 6119 5.319043 TGTTGGGAAATAGTTTCAGAGGT 57.681 39.130 4.98 0.00 41.43 3.85
3378 6120 5.070001 TGTTGGGAAATAGTTTCAGAGGTG 58.930 41.667 4.98 0.00 41.43 4.00
3379 6121 4.301072 TGGGAAATAGTTTCAGAGGTGG 57.699 45.455 4.98 0.00 41.43 4.61
3380 6122 3.010138 TGGGAAATAGTTTCAGAGGTGGG 59.990 47.826 4.98 0.00 41.43 4.61
3381 6123 3.010250 GGGAAATAGTTTCAGAGGTGGGT 59.990 47.826 4.98 0.00 41.43 4.51
3382 6124 4.262617 GGAAATAGTTTCAGAGGTGGGTC 58.737 47.826 4.98 0.00 41.43 4.46
3383 6125 4.019231 GGAAATAGTTTCAGAGGTGGGTCT 60.019 45.833 4.98 0.00 41.43 3.85
3384 6126 4.828072 AATAGTTTCAGAGGTGGGTCTC 57.172 45.455 0.00 0.00 0.00 3.36
3385 6127 2.407340 AGTTTCAGAGGTGGGTCTCT 57.593 50.000 0.00 0.00 44.25 3.10
3390 6132 2.178631 AGAGGTGGGTCTCTGAGGT 58.821 57.895 4.59 0.00 42.05 3.85
3391 6133 0.252012 AGAGGTGGGTCTCTGAGGTG 60.252 60.000 4.59 0.00 42.05 4.00
3392 6134 0.543174 GAGGTGGGTCTCTGAGGTGT 60.543 60.000 4.59 0.00 0.00 4.16
3393 6135 0.104934 AGGTGGGTCTCTGAGGTGTT 60.105 55.000 4.59 0.00 0.00 3.32
3394 6136 0.765510 GGTGGGTCTCTGAGGTGTTT 59.234 55.000 4.59 0.00 0.00 2.83
3395 6137 1.975680 GGTGGGTCTCTGAGGTGTTTA 59.024 52.381 4.59 0.00 0.00 2.01
3396 6138 2.370849 GGTGGGTCTCTGAGGTGTTTAA 59.629 50.000 4.59 0.00 0.00 1.52
3397 6139 3.557264 GGTGGGTCTCTGAGGTGTTTAAG 60.557 52.174 4.59 0.00 0.00 1.85
3398 6140 2.038557 TGGGTCTCTGAGGTGTTTAAGC 59.961 50.000 4.59 0.00 0.00 3.09
3399 6141 2.303311 GGGTCTCTGAGGTGTTTAAGCT 59.697 50.000 4.59 0.00 40.07 3.74
3400 6142 3.244596 GGGTCTCTGAGGTGTTTAAGCTT 60.245 47.826 3.48 3.48 36.52 3.74
3401 6143 4.390264 GGTCTCTGAGGTGTTTAAGCTTT 58.610 43.478 3.20 0.00 36.52 3.51
3402 6144 4.214332 GGTCTCTGAGGTGTTTAAGCTTTG 59.786 45.833 3.20 0.00 36.52 2.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 3.320541 GCTAGCTAGAGCATCCTTCAGAA 59.679 47.826 25.15 0.00 45.16 3.02
79 81 1.330234 TGGTACCAACAGCGTACAGA 58.670 50.000 13.60 0.00 38.26 3.41
103 105 2.386935 GGATTGAGGGGAGGGGGTG 61.387 68.421 0.00 0.00 0.00 4.61
119 121 1.569943 TATGGGTGTGGCATGCTGGA 61.570 55.000 18.92 0.00 0.00 3.86
163 165 7.041107 GCAGCAATTGGTAATGGAAGATTTTA 58.959 34.615 10.31 0.00 0.00 1.52
168 170 3.700538 AGCAGCAATTGGTAATGGAAGA 58.299 40.909 10.31 0.00 35.30 2.87
169 171 4.037208 CCTAGCAGCAATTGGTAATGGAAG 59.963 45.833 10.31 0.00 39.15 3.46
175 177 2.026356 TCAGCCTAGCAGCAATTGGTAA 60.026 45.455 10.31 0.00 39.15 2.85
202 204 1.595882 CTGACCAGGGAGCTCACAG 59.404 63.158 20.34 10.62 0.00 3.66
203 205 2.587247 GCTGACCAGGGAGCTCACA 61.587 63.158 20.34 5.85 32.12 3.58
207 209 3.007920 CAGGCTGACCAGGGAGCT 61.008 66.667 9.42 0.00 39.06 4.09
225 227 2.203153 ACACGGGTGTTCTGGTGC 60.203 61.111 0.00 0.00 41.83 5.01
234 239 1.673400 TGACAACATTGAACACGGGTG 59.327 47.619 0.00 0.00 0.00 4.61
238 243 4.420168 ACCTTTTGACAACATTGAACACG 58.580 39.130 0.00 0.00 0.00 4.49
245 250 4.638421 TCGACAGAACCTTTTGACAACATT 59.362 37.500 0.00 0.00 0.00 2.71
257 262 1.901948 TGGCGTCTCGACAGAACCT 60.902 57.895 0.00 0.00 41.22 3.50
266 271 1.140589 AAGAGAGCATGGCGTCTCG 59.859 57.895 0.00 0.00 43.47 4.04
283 288 7.564292 TGGATGGTCATGAATGATATTTTCCAA 59.436 33.333 0.00 0.00 39.30 3.53
287 292 6.014840 GGCTGGATGGTCATGAATGATATTTT 60.015 38.462 0.00 0.00 39.30 1.82
331 343 5.106830 GGACTGTTACAAAACTGATAACCCG 60.107 44.000 2.69 0.00 37.81 5.28
344 356 0.390124 ACGAAGGCGGACTGTTACAA 59.610 50.000 0.00 0.00 43.17 2.41
345 357 0.038892 GACGAAGGCGGACTGTTACA 60.039 55.000 0.00 0.00 43.17 2.41
346 358 0.243095 AGACGAAGGCGGACTGTTAC 59.757 55.000 0.00 0.00 43.17 2.50
353 365 0.391130 CAAATCCAGACGAAGGCGGA 60.391 55.000 0.00 0.00 43.17 5.54
356 368 1.468914 GTTCCAAATCCAGACGAAGGC 59.531 52.381 0.00 0.00 0.00 4.35
381 393 6.698008 TCCAATGCACTGTATGAAATAAGG 57.302 37.500 0.00 0.00 0.00 2.69
383 395 7.176515 ACACTTCCAATGCACTGTATGAAATAA 59.823 33.333 0.00 0.00 0.00 1.40
384 396 6.658816 ACACTTCCAATGCACTGTATGAAATA 59.341 34.615 0.00 0.00 0.00 1.40
385 397 5.477984 ACACTTCCAATGCACTGTATGAAAT 59.522 36.000 0.00 0.00 0.00 2.17
386 398 4.826733 ACACTTCCAATGCACTGTATGAAA 59.173 37.500 0.00 0.00 0.00 2.69
387 399 4.397420 ACACTTCCAATGCACTGTATGAA 58.603 39.130 0.00 0.00 0.00 2.57
388 400 4.002982 GACACTTCCAATGCACTGTATGA 58.997 43.478 0.00 0.00 0.00 2.15
389 401 3.127548 GGACACTTCCAATGCACTGTATG 59.872 47.826 0.00 0.00 42.30 2.39
390 402 3.347216 GGACACTTCCAATGCACTGTAT 58.653 45.455 0.00 0.00 42.30 2.29
391 403 2.778299 GGACACTTCCAATGCACTGTA 58.222 47.619 0.00 0.00 42.30 2.74
392 404 1.609208 GGACACTTCCAATGCACTGT 58.391 50.000 0.00 0.00 42.30 3.55
393 405 0.518636 CGGACACTTCCAATGCACTG 59.481 55.000 0.00 0.00 43.00 3.66
394 406 1.237285 GCGGACACTTCCAATGCACT 61.237 55.000 0.00 0.00 43.00 4.40
395 407 1.210155 GCGGACACTTCCAATGCAC 59.790 57.895 0.00 0.00 43.00 4.57
396 408 0.821301 TTGCGGACACTTCCAATGCA 60.821 50.000 0.00 0.00 43.00 3.96
397 409 0.313672 TTTGCGGACACTTCCAATGC 59.686 50.000 0.00 0.00 43.00 3.56
398 410 3.302365 AATTTGCGGACACTTCCAATG 57.698 42.857 0.00 0.00 43.00 2.82
399 411 3.573967 AGAAATTTGCGGACACTTCCAAT 59.426 39.130 0.00 0.00 43.00 3.16
400 412 2.955660 AGAAATTTGCGGACACTTCCAA 59.044 40.909 0.00 0.00 43.00 3.53
401 413 2.582052 AGAAATTTGCGGACACTTCCA 58.418 42.857 0.00 0.00 43.00 3.53
402 414 3.308530 CAAGAAATTTGCGGACACTTCC 58.691 45.455 0.00 0.00 38.77 3.46
403 415 3.243401 ACCAAGAAATTTGCGGACACTTC 60.243 43.478 0.00 0.00 0.00 3.01
429 441 1.377987 GGGCACGGCAGGACAATTA 60.378 57.895 0.00 0.00 0.00 1.40
440 452 3.753272 CCAAATAGATATTGAGGGCACGG 59.247 47.826 0.00 0.00 0.00 4.94
442 454 6.064717 AGAACCAAATAGATATTGAGGGCAC 58.935 40.000 8.40 0.00 0.00 5.01
451 463 9.461312 TGCACAAAAGTAGAACCAAATAGATAT 57.539 29.630 0.00 0.00 0.00 1.63
492 576 9.996554 ATACACTATCACGAATTCAAATGGATA 57.003 29.630 6.22 4.32 0.00 2.59
493 577 8.777413 CATACACTATCACGAATTCAAATGGAT 58.223 33.333 6.22 3.41 0.00 3.41
494 578 7.768582 ACATACACTATCACGAATTCAAATGGA 59.231 33.333 6.22 0.00 0.00 3.41
496 580 9.773328 AAACATACACTATCACGAATTCAAATG 57.227 29.630 6.22 0.76 0.00 2.32
501 585 9.095065 AGGTAAAACATACACTATCACGAATTC 57.905 33.333 0.00 0.00 0.00 2.17
503 587 9.444600 AAAGGTAAAACATACACTATCACGAAT 57.555 29.630 0.00 0.00 0.00 3.34
504 588 8.836268 AAAGGTAAAACATACACTATCACGAA 57.164 30.769 0.00 0.00 0.00 3.85
505 589 8.089597 TGAAAGGTAAAACATACACTATCACGA 58.910 33.333 0.00 0.00 0.00 4.35
506 590 8.246908 TGAAAGGTAAAACATACACTATCACG 57.753 34.615 0.00 0.00 0.00 4.35
520 604 1.816224 GCCGGCTGATGAAAGGTAAAA 59.184 47.619 22.15 0.00 0.00 1.52
537 621 2.757868 TGGGGAAATATTCACAAAGCCG 59.242 45.455 0.00 0.00 33.74 5.52
539 623 5.652452 AGTACTGGGGAAATATTCACAAAGC 59.348 40.000 0.00 0.00 33.74 3.51
550 634 4.019174 CTGCATTTCAGTACTGGGGAAAT 58.981 43.478 22.48 16.94 40.76 2.17
558 642 3.692257 ACAGCTCTGCATTTCAGTACT 57.308 42.857 0.00 0.00 43.32 2.73
569 659 3.072944 AGATTCACTGAAACAGCTCTGC 58.927 45.455 0.00 0.00 34.37 4.26
623 713 1.961133 ATTTGGGAACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
624 714 1.961133 TATTTGGGAACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
625 715 4.102681 ACTTATATTTGGGAACGGAGGGAG 59.897 45.833 0.00 0.00 0.00 4.30
626 716 4.042174 ACTTATATTTGGGAACGGAGGGA 58.958 43.478 0.00 0.00 0.00 4.20
627 717 4.432980 ACTTATATTTGGGAACGGAGGG 57.567 45.455 0.00 0.00 0.00 4.30
628 718 7.937394 AGAAATACTTATATTTGGGAACGGAGG 59.063 37.037 0.00 0.00 40.42 4.30
629 719 8.904099 AGAAATACTTATATTTGGGAACGGAG 57.096 34.615 0.00 0.00 40.42 4.63
630 720 9.991906 CTAGAAATACTTATATTTGGGAACGGA 57.008 33.333 0.00 0.00 40.42 4.69
631 721 9.991906 TCTAGAAATACTTATATTTGGGAACGG 57.008 33.333 0.00 0.00 40.42 4.44
644 734 9.268282 ACTTGGTGGAATCTCTAGAAATACTTA 57.732 33.333 0.00 0.00 0.00 2.24
645 735 8.043710 CACTTGGTGGAATCTCTAGAAATACTT 58.956 37.037 0.00 0.00 0.00 2.24
646 736 7.400339 TCACTTGGTGGAATCTCTAGAAATACT 59.600 37.037 0.00 0.00 33.87 2.12
647 737 7.492994 GTCACTTGGTGGAATCTCTAGAAATAC 59.507 40.741 0.00 0.00 33.87 1.89
648 738 7.400339 AGTCACTTGGTGGAATCTCTAGAAATA 59.600 37.037 0.00 0.00 33.87 1.40
649 739 6.214412 AGTCACTTGGTGGAATCTCTAGAAAT 59.786 38.462 0.00 0.00 33.87 2.17
650 740 5.544176 AGTCACTTGGTGGAATCTCTAGAAA 59.456 40.000 0.00 0.00 33.87 2.52
651 741 5.087323 AGTCACTTGGTGGAATCTCTAGAA 58.913 41.667 0.00 0.00 33.87 2.10
652 742 4.678256 AGTCACTTGGTGGAATCTCTAGA 58.322 43.478 0.00 0.00 33.87 2.43
653 743 5.419155 TGTAGTCACTTGGTGGAATCTCTAG 59.581 44.000 0.00 0.00 33.87 2.43
654 744 5.330233 TGTAGTCACTTGGTGGAATCTCTA 58.670 41.667 0.00 0.00 33.87 2.43
655 745 4.160329 TGTAGTCACTTGGTGGAATCTCT 58.840 43.478 0.00 0.00 33.87 3.10
656 746 4.537135 TGTAGTCACTTGGTGGAATCTC 57.463 45.455 0.00 0.00 33.87 2.75
657 747 5.394224 CGTATGTAGTCACTTGGTGGAATCT 60.394 44.000 0.00 0.00 33.87 2.40
658 748 4.804139 CGTATGTAGTCACTTGGTGGAATC 59.196 45.833 0.00 0.00 33.87 2.52
659 749 4.382685 CCGTATGTAGTCACTTGGTGGAAT 60.383 45.833 0.00 0.00 33.87 3.01
660 750 3.056393 CCGTATGTAGTCACTTGGTGGAA 60.056 47.826 0.00 0.00 33.87 3.53
661 751 2.494471 CCGTATGTAGTCACTTGGTGGA 59.506 50.000 0.00 0.00 33.87 4.02
662 752 2.494471 TCCGTATGTAGTCACTTGGTGG 59.506 50.000 0.00 0.00 33.87 4.61
663 753 3.192844 ACTCCGTATGTAGTCACTTGGTG 59.807 47.826 0.00 0.00 34.45 4.17
664 754 3.428532 ACTCCGTATGTAGTCACTTGGT 58.571 45.455 0.00 0.00 0.00 3.67
665 755 5.571784 TTACTCCGTATGTAGTCACTTGG 57.428 43.478 0.00 0.00 0.00 3.61
666 756 7.758076 TCATTTTACTCCGTATGTAGTCACTTG 59.242 37.037 0.00 0.00 0.00 3.16
667 757 7.833786 TCATTTTACTCCGTATGTAGTCACTT 58.166 34.615 0.00 0.00 0.00 3.16
668 758 7.122353 ACTCATTTTACTCCGTATGTAGTCACT 59.878 37.037 0.00 0.00 0.00 3.41
669 759 7.220300 CACTCATTTTACTCCGTATGTAGTCAC 59.780 40.741 0.00 0.00 0.00 3.67
670 760 7.121611 TCACTCATTTTACTCCGTATGTAGTCA 59.878 37.037 0.00 0.00 0.00 3.41
671 761 7.478322 TCACTCATTTTACTCCGTATGTAGTC 58.522 38.462 0.00 0.00 0.00 2.59
672 762 7.400599 TCACTCATTTTACTCCGTATGTAGT 57.599 36.000 0.00 0.00 0.00 2.73
673 763 8.873215 ATTCACTCATTTTACTCCGTATGTAG 57.127 34.615 0.00 0.00 0.00 2.74
674 764 8.692710 AGATTCACTCATTTTACTCCGTATGTA 58.307 33.333 0.00 0.00 0.00 2.29
675 765 7.556844 AGATTCACTCATTTTACTCCGTATGT 58.443 34.615 0.00 0.00 0.00 2.29
676 766 8.969267 GTAGATTCACTCATTTTACTCCGTATG 58.031 37.037 0.00 0.00 0.00 2.39
677 767 8.692710 TGTAGATTCACTCATTTTACTCCGTAT 58.307 33.333 0.00 0.00 0.00 3.06
678 768 7.972277 GTGTAGATTCACTCATTTTACTCCGTA 59.028 37.037 0.00 0.00 35.68 4.02
679 769 6.812160 GTGTAGATTCACTCATTTTACTCCGT 59.188 38.462 0.00 0.00 35.68 4.69
680 770 7.036220 AGTGTAGATTCACTCATTTTACTCCG 58.964 38.462 0.00 0.00 44.07 4.63
693 783 9.856488 TGTAGACATTTTAGAGTGTAGATTCAC 57.144 33.333 0.00 0.00 38.46 3.18
701 791 7.921214 CGGATGTATGTAGACATTTTAGAGTGT 59.079 37.037 0.00 0.00 40.18 3.55
702 792 7.921214 ACGGATGTATGTAGACATTTTAGAGTG 59.079 37.037 0.00 0.00 40.18 3.51
703 793 8.008513 ACGGATGTATGTAGACATTTTAGAGT 57.991 34.615 0.00 0.00 40.18 3.24
719 809 8.783093 CAAATGGAATACAACATACGGATGTAT 58.217 33.333 15.10 8.21 45.93 2.29
720 810 7.988028 TCAAATGGAATACAACATACGGATGTA 59.012 33.333 15.10 0.00 45.93 2.29
722 812 7.258022 TCAAATGGAATACAACATACGGATG 57.742 36.000 5.94 5.94 39.16 3.51
723 813 7.873719 TTCAAATGGAATACAACATACGGAT 57.126 32.000 0.00 0.00 0.00 4.18
724 814 7.689446 TTTCAAATGGAATACAACATACGGA 57.311 32.000 0.00 0.00 34.91 4.69
725 815 7.973388 ACATTTCAAATGGAATACAACATACGG 59.027 33.333 14.70 0.00 34.91 4.02
726 816 8.909708 ACATTTCAAATGGAATACAACATACG 57.090 30.769 14.70 0.00 34.91 3.06
755 845 9.788889 CCCTCCGTTCCTAAATATAAGTATTTT 57.211 33.333 0.00 0.00 40.21 1.82
756 846 9.162733 TCCCTCCGTTCCTAAATATAAGTATTT 57.837 33.333 0.00 0.00 41.92 1.40
757 847 8.731591 TCCCTCCGTTCCTAAATATAAGTATT 57.268 34.615 0.00 0.00 31.89 1.89
758 848 7.954620 ACTCCCTCCGTTCCTAAATATAAGTAT 59.045 37.037 0.00 0.00 0.00 2.12
759 849 7.300658 ACTCCCTCCGTTCCTAAATATAAGTA 58.699 38.462 0.00 0.00 0.00 2.24
760 850 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
761 851 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
762 852 7.529555 TCTACTCCCTCCGTTCCTAAATATAA 58.470 38.462 0.00 0.00 0.00 0.98
763 853 7.095183 TCTACTCCCTCCGTTCCTAAATATA 57.905 40.000 0.00 0.00 0.00 0.86
764 854 5.961897 TCTACTCCCTCCGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
765 855 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
766 856 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
767 857 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
768 858 3.245371 TGTTCTACTCCCTCCGTTCCTAA 60.245 47.826 0.00 0.00 0.00 2.69
769 859 2.309755 TGTTCTACTCCCTCCGTTCCTA 59.690 50.000 0.00 0.00 0.00 2.94
770 860 1.076677 TGTTCTACTCCCTCCGTTCCT 59.923 52.381 0.00 0.00 0.00 3.36
771 861 1.553706 TGTTCTACTCCCTCCGTTCC 58.446 55.000 0.00 0.00 0.00 3.62
772 862 3.056035 ACAATGTTCTACTCCCTCCGTTC 60.056 47.826 0.00 0.00 0.00 3.95
773 863 2.904434 ACAATGTTCTACTCCCTCCGTT 59.096 45.455 0.00 0.00 0.00 4.44
774 864 2.537143 ACAATGTTCTACTCCCTCCGT 58.463 47.619 0.00 0.00 0.00 4.69
775 865 3.195825 AGAACAATGTTCTACTCCCTCCG 59.804 47.826 25.38 0.00 0.00 4.63
776 866 4.828072 AGAACAATGTTCTACTCCCTCC 57.172 45.455 25.38 0.00 0.00 4.30
777 867 7.511959 AAAAAGAACAATGTTCTACTCCCTC 57.488 36.000 26.57 0.00 0.00 4.30
778 868 8.990163 TTAAAAAGAACAATGTTCTACTCCCT 57.010 30.769 26.57 9.26 0.00 4.20
779 869 9.063615 TCTTAAAAAGAACAATGTTCTACTCCC 57.936 33.333 26.57 0.00 33.83 4.30
780 870 9.880064 GTCTTAAAAAGAACAATGTTCTACTCC 57.120 33.333 26.57 8.04 39.67 3.85
790 880 9.936759 TGGAAAAACTGTCTTAAAAAGAACAAT 57.063 25.926 0.00 0.00 39.67 2.71
802 892 5.334879 GCATACACGATGGAAAAACTGTCTT 60.335 40.000 0.00 0.00 35.91 3.01
815 905 4.876125 ACTTCTCTATGGCATACACGATG 58.124 43.478 2.32 5.47 38.73 3.84
816 906 5.537300 AACTTCTCTATGGCATACACGAT 57.463 39.130 2.32 0.00 0.00 3.73
894 985 5.465724 CGGTACACTAAAGGAGAATATTGCC 59.534 44.000 0.00 0.00 0.00 4.52
918 1009 2.437085 ATACCCTGGGCAAACTTAGC 57.563 50.000 14.08 0.00 0.00 3.09
994 1091 8.015658 AGAATAGTAACAAATGTCGCTGTTTTC 58.984 33.333 0.00 0.00 37.05 2.29
1000 1097 6.163476 TCACAGAATAGTAACAAATGTCGCT 58.837 36.000 0.00 0.00 0.00 4.93
1006 1103 9.463443 GCAGTTTTTCACAGAATAGTAACAAAT 57.537 29.630 0.00 0.00 0.00 2.32
1013 1110 6.318648 TCAAGTGCAGTTTTTCACAGAATAGT 59.681 34.615 3.38 0.00 35.76 2.12
1017 1114 4.217334 TGTCAAGTGCAGTTTTTCACAGAA 59.783 37.500 3.38 0.00 35.76 3.02
1018 1115 3.755905 TGTCAAGTGCAGTTTTTCACAGA 59.244 39.130 3.38 0.00 35.76 3.41
1082 1179 5.766174 GCCAGGGAATAAAACGGAACATATA 59.234 40.000 0.00 0.00 0.00 0.86
1104 1201 2.741486 TTAGGTGCCCGTGAGTTGCC 62.741 60.000 0.00 0.00 0.00 4.52
1156 1258 2.082140 ACGGAGGGAGTACATGCATA 57.918 50.000 0.00 0.00 0.00 3.14
1157 1259 1.139058 GAACGGAGGGAGTACATGCAT 59.861 52.381 0.00 0.00 0.00 3.96
1163 1265 3.450096 ACATTTAGGAACGGAGGGAGTAC 59.550 47.826 0.00 0.00 0.00 2.73
1164 1266 3.716431 ACATTTAGGAACGGAGGGAGTA 58.284 45.455 0.00 0.00 0.00 2.59
1165 1267 2.547990 ACATTTAGGAACGGAGGGAGT 58.452 47.619 0.00 0.00 0.00 3.85
1166 1268 4.161754 ACTTACATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
1167 1269 4.098894 ACTTACATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
1168 1270 4.161754 AGACTTACATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
1169 1271 5.340439 AGACTTACATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
1170 1272 7.668525 AAAAGACTTACATTTAGGAACGGAG 57.331 36.000 0.00 0.00 0.00 4.63
1171 1273 9.211485 CTAAAAAGACTTACATTTAGGAACGGA 57.789 33.333 8.91 0.00 33.69 4.69
1172 1274 9.211485 TCTAAAAAGACTTACATTTAGGAACGG 57.789 33.333 13.94 0.00 36.48 4.44
1202 1304 4.219944 GCTCCGTATGTAGTCCATATTGGA 59.780 45.833 0.00 0.00 45.98 3.53
1203 1305 4.021456 TGCTCCGTATGTAGTCCATATTGG 60.021 45.833 0.00 0.00 38.29 3.16
1204 1306 5.134202 TGCTCCGTATGTAGTCCATATTG 57.866 43.478 0.00 0.00 38.29 1.90
1205 1307 5.801531 TTGCTCCGTATGTAGTCCATATT 57.198 39.130 0.00 0.00 38.29 1.28
1206 1308 5.801531 TTTGCTCCGTATGTAGTCCATAT 57.198 39.130 0.00 0.00 38.29 1.78
1207 1309 5.601583 TTTTGCTCCGTATGTAGTCCATA 57.398 39.130 0.00 0.00 34.86 2.74
1208 1310 4.481368 TTTTGCTCCGTATGTAGTCCAT 57.519 40.909 0.00 0.00 37.58 3.41
1209 1311 3.965379 TTTTGCTCCGTATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
1210 1312 5.569413 CAATTTTTGCTCCGTATGTAGTCC 58.431 41.667 0.00 0.00 0.00 3.85
1225 1327 9.801714 GTAGATTCACTCATTTTGCAATTTTTG 57.198 29.630 0.00 0.00 0.00 2.44
1226 1328 9.545105 TGTAGATTCACTCATTTTGCAATTTTT 57.455 25.926 0.00 0.00 0.00 1.94
1227 1329 8.981647 GTGTAGATTCACTCATTTTGCAATTTT 58.018 29.630 0.00 0.00 35.68 1.82
1228 1330 8.362639 AGTGTAGATTCACTCATTTTGCAATTT 58.637 29.630 0.00 0.00 44.07 1.82
1229 1331 7.889469 AGTGTAGATTCACTCATTTTGCAATT 58.111 30.769 0.00 0.00 44.07 2.32
1230 1332 7.458409 AGTGTAGATTCACTCATTTTGCAAT 57.542 32.000 0.00 0.00 44.07 3.56
1231 1333 6.882610 AGTGTAGATTCACTCATTTTGCAA 57.117 33.333 0.00 0.00 44.07 4.08
1262 1364 9.339850 GGACTACATACGGATGTATATAGACAT 57.660 37.037 20.64 12.70 45.42 3.06
1263 1365 8.323567 TGGACTACATACGGATGTATATAGACA 58.676 37.037 20.64 12.12 45.42 3.41
1264 1366 8.728337 TGGACTACATACGGATGTATATAGAC 57.272 38.462 20.64 10.95 45.42 2.59
1269 1371 9.689501 TCAATATGGACTACATACGGATGTATA 57.310 33.333 20.64 11.30 45.42 1.47
1270 1372 8.589701 TCAATATGGACTACATACGGATGTAT 57.410 34.615 20.64 9.39 45.42 2.29
1271 1373 8.411991 TTCAATATGGACTACATACGGATGTA 57.588 34.615 19.32 19.32 44.77 2.29
1273 1375 8.777865 ATTTCAATATGGACTACATACGGATG 57.222 34.615 5.94 5.94 44.41 3.51
1274 1376 8.816894 AGATTTCAATATGGACTACATACGGAT 58.183 33.333 0.00 0.00 44.41 4.18
1275 1377 8.190326 AGATTTCAATATGGACTACATACGGA 57.810 34.615 0.00 0.00 44.41 4.69
1276 1378 8.307483 AGAGATTTCAATATGGACTACATACGG 58.693 37.037 0.00 0.00 44.41 4.02
1284 1386 9.620259 GTCCTTTTAGAGATTTCAATATGGACT 57.380 33.333 0.00 0.00 35.99 3.85
1285 1387 9.620259 AGTCCTTTTAGAGATTTCAATATGGAC 57.380 33.333 0.00 0.00 38.27 4.02
1303 1405 7.991460 CCTCCGTTCCTAAATATAAGTCCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
1304 1406 7.346436 TCCTCCGTTCCTAAATATAAGTCCTTT 59.654 37.037 0.00 0.00 0.00 3.11
1305 1407 6.842807 TCCTCCGTTCCTAAATATAAGTCCTT 59.157 38.462 0.00 0.00 0.00 3.36
1306 1408 6.379579 TCCTCCGTTCCTAAATATAAGTCCT 58.620 40.000 0.00 0.00 0.00 3.85
1307 1409 6.661304 TCCTCCGTTCCTAAATATAAGTCC 57.339 41.667 0.00 0.00 0.00 3.85
1308 1410 7.724287 ACTTCCTCCGTTCCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
1309 1411 7.672122 ACTTCCTCCGTTCCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
1319 1421 8.302438 CGTTAATAATATACTTCCTCCGTTCCT 58.698 37.037 0.00 0.00 0.00 3.36
1320 1422 8.299570 TCGTTAATAATATACTTCCTCCGTTCC 58.700 37.037 0.00 0.00 0.00 3.62
1321 1423 9.852091 ATCGTTAATAATATACTTCCTCCGTTC 57.148 33.333 0.00 0.00 0.00 3.95
1323 1425 9.852091 GAATCGTTAATAATATACTTCCTCCGT 57.148 33.333 0.00 0.00 0.00 4.69
1324 1426 9.298774 GGAATCGTTAATAATATACTTCCTCCG 57.701 37.037 0.00 0.00 0.00 4.63
1344 1446 5.179368 TGCAAAGTTTAGTCTTGAGGAATCG 59.821 40.000 0.00 0.00 0.00 3.34
1349 1453 4.217118 AGCATGCAAAGTTTAGTCTTGAGG 59.783 41.667 21.98 0.00 0.00 3.86
1359 1463 4.082125 ACTAAGCCTAGCATGCAAAGTTT 58.918 39.130 21.98 13.46 0.00 2.66
1364 1468 2.358957 CACACTAAGCCTAGCATGCAA 58.641 47.619 21.98 0.00 0.00 4.08
1365 1469 1.407299 CCACACTAAGCCTAGCATGCA 60.407 52.381 21.98 5.01 0.00 3.96
1366 1470 1.303309 CCACACTAAGCCTAGCATGC 58.697 55.000 10.51 10.51 0.00 4.06
1367 1471 1.303309 GCCACACTAAGCCTAGCATG 58.697 55.000 0.00 0.00 0.00 4.06
1368 1472 0.911769 TGCCACACTAAGCCTAGCAT 59.088 50.000 0.00 0.00 0.00 3.79
1399 1645 5.753438 TCTGCTGCATAAATACCTCGTTTAG 59.247 40.000 1.31 0.00 0.00 1.85
1407 1653 6.874288 AGAGAAATCTGCTGCATAAATACC 57.126 37.500 1.31 0.00 0.00 2.73
1420 1666 8.147642 ACAGTACAAACAAGAAGAGAAATCTG 57.852 34.615 0.00 0.00 0.00 2.90
1458 1704 5.363005 TCCAGGTAGTAGAAAGAGCCATTAC 59.637 44.000 0.00 0.00 0.00 1.89
1465 1711 7.386851 TCAACAATTCCAGGTAGTAGAAAGAG 58.613 38.462 0.00 0.00 0.00 2.85
1466 1712 7.311092 TCAACAATTCCAGGTAGTAGAAAGA 57.689 36.000 0.00 0.00 0.00 2.52
1469 1715 8.626526 GTTTTTCAACAATTCCAGGTAGTAGAA 58.373 33.333 0.00 0.00 32.54 2.10
1529 1779 6.916360 ACCAAACATCACCAATTGTTAGAT 57.084 33.333 4.43 1.99 35.09 1.98
1590 1840 1.136329 AGATTGTCCTGCCAGTGGGT 61.136 55.000 12.15 0.00 36.17 4.51
1704 1955 2.695127 AATCGGCCAATGTACGGTTA 57.305 45.000 2.24 0.00 0.00 2.85
1912 2164 2.288025 GGTTGTCGTCCCCCAGCTA 61.288 63.158 0.00 0.00 0.00 3.32
1919 2171 3.819877 AAGGTGCGGTTGTCGTCCC 62.820 63.158 0.00 0.00 41.72 4.46
1981 2233 2.758327 TGGCCTACACGAGCGGAT 60.758 61.111 3.32 0.00 0.00 4.18
2025 2277 3.321111 TCTTTCCAGTTAGCGTCTTCACT 59.679 43.478 0.00 0.00 0.00 3.41
2159 2411 3.008517 TGCGGCCATCCTCCAGAA 61.009 61.111 2.24 0.00 0.00 3.02
2184 2436 4.523173 TCCTCGTTGTGAATCTTGTAGTCT 59.477 41.667 0.00 0.00 0.00 3.24
2222 4896 2.671619 AACCACATTGGCGGACCG 60.672 61.111 10.29 10.29 42.67 4.79
2224 4898 2.258286 GCAACCACATTGGCGGAC 59.742 61.111 1.73 0.00 42.67 4.79
2300 4976 2.831685 AGTTCACTGATAACGCACCA 57.168 45.000 0.00 0.00 32.00 4.17
2301 4977 4.430007 TGATAGTTCACTGATAACGCACC 58.570 43.478 0.00 0.00 32.00 5.01
2302 4978 6.477033 AGAATGATAGTTCACTGATAACGCAC 59.523 38.462 0.00 0.00 33.85 5.34
2303 4979 6.573434 AGAATGATAGTTCACTGATAACGCA 58.427 36.000 0.00 0.00 33.85 5.24
2304 4980 7.863375 ACTAGAATGATAGTTCACTGATAACGC 59.137 37.037 0.00 0.00 31.89 4.84
2480 5192 7.989947 TGATAATACAGACCTAGGGACTTTT 57.010 36.000 14.81 8.01 41.75 2.27
2507 5220 7.254590 GCATACAGACTGTATTCTCAATCAACC 60.255 40.741 22.84 0.48 40.40 3.77
2540 5253 4.725790 AGAAATGAGGCTATTTGTTGGC 57.274 40.909 6.65 0.00 30.78 4.52
2543 5260 7.890655 ACTAGGAAAGAAATGAGGCTATTTGTT 59.109 33.333 0.00 6.42 35.73 2.83
2556 5273 7.393515 AGAAATTAACCGCACTAGGAAAGAAAT 59.606 33.333 0.00 0.00 34.73 2.17
2564 5281 6.046593 TGATACAGAAATTAACCGCACTAGG 58.953 40.000 0.00 0.00 37.30 3.02
2567 5284 6.374333 ACATTGATACAGAAATTAACCGCACT 59.626 34.615 0.00 0.00 0.00 4.40
2568 5285 6.551736 ACATTGATACAGAAATTAACCGCAC 58.448 36.000 0.00 0.00 0.00 5.34
2588 5329 7.298122 GTTGTGATGACATAGACGAAAACATT 58.702 34.615 0.00 0.00 30.13 2.71
2597 5338 6.560253 ACTTTTGGTTGTGATGACATAGAC 57.440 37.500 0.00 0.00 30.13 2.59
2613 5354 5.391310 CGATCCTCATCACTTCAACTTTTGG 60.391 44.000 0.00 0.00 0.00 3.28
2614 5355 5.180117 ACGATCCTCATCACTTCAACTTTTG 59.820 40.000 0.00 0.00 0.00 2.44
2640 5381 4.011966 AGAAGACATGCAATCACAGTGA 57.988 40.909 5.50 5.50 0.00 3.41
2645 5386 9.793252 ATTTTATTGTAGAAGACATGCAATCAC 57.207 29.630 0.00 0.00 38.07 3.06
2671 5412 8.214721 TGTGGTTCACAATATGCGATAATAAA 57.785 30.769 0.00 0.00 41.69 1.40
2672 5413 7.793927 TGTGGTTCACAATATGCGATAATAA 57.206 32.000 0.00 0.00 41.69 1.40
2707 5449 2.079925 GCAGTCCTGATTCCAACTCAC 58.920 52.381 0.00 0.00 0.00 3.51
2713 5455 5.178096 TCTTATTTGCAGTCCTGATTCCA 57.822 39.130 0.00 0.00 0.00 3.53
2733 5475 3.325135 AGGGTCGACTTGATTTCAACTCT 59.675 43.478 16.46 0.00 0.00 3.24
2749 5491 3.850098 AACAGCAAGGGCAGGGTCG 62.850 63.158 0.00 0.00 44.61 4.79
2751 5493 2.203538 CAACAGCAAGGGCAGGGT 60.204 61.111 0.00 0.00 44.61 4.34
2754 5496 1.975407 CCTCCAACAGCAAGGGCAG 60.975 63.158 0.00 0.00 44.61 4.85
2755 5497 2.115910 CCTCCAACAGCAAGGGCA 59.884 61.111 0.00 0.00 44.61 5.36
2756 5498 1.676967 CTCCTCCAACAGCAAGGGC 60.677 63.158 0.00 0.00 41.61 5.19
2757 5499 1.001641 CCTCCTCCAACAGCAAGGG 60.002 63.158 0.00 0.00 0.00 3.95
2759 5501 1.681166 CCATCCTCCTCCAACAGCAAG 60.681 57.143 0.00 0.00 0.00 4.01
2760 5502 0.329261 CCATCCTCCTCCAACAGCAA 59.671 55.000 0.00 0.00 0.00 3.91
2761 5503 1.993653 CCATCCTCCTCCAACAGCA 59.006 57.895 0.00 0.00 0.00 4.41
2762 5504 1.452833 GCCATCCTCCTCCAACAGC 60.453 63.158 0.00 0.00 0.00 4.40
2763 5505 1.153289 CGCCATCCTCCTCCAACAG 60.153 63.158 0.00 0.00 0.00 3.16
2764 5506 2.669133 CCGCCATCCTCCTCCAACA 61.669 63.158 0.00 0.00 0.00 3.33
2765 5507 2.190578 CCGCCATCCTCCTCCAAC 59.809 66.667 0.00 0.00 0.00 3.77
2766 5508 3.797353 GCCGCCATCCTCCTCCAA 61.797 66.667 0.00 0.00 0.00 3.53
2768 5510 4.247380 CTGCCGCCATCCTCCTCC 62.247 72.222 0.00 0.00 0.00 4.30
2769 5511 4.247380 CCTGCCGCCATCCTCCTC 62.247 72.222 0.00 0.00 0.00 3.71
2770 5512 4.804420 TCCTGCCGCCATCCTCCT 62.804 66.667 0.00 0.00 0.00 3.69
2771 5513 3.564218 ATCCTGCCGCCATCCTCC 61.564 66.667 0.00 0.00 0.00 4.30
2772 5514 2.281345 CATCCTGCCGCCATCCTC 60.281 66.667 0.00 0.00 0.00 3.71
2773 5515 2.769621 TCATCCTGCCGCCATCCT 60.770 61.111 0.00 0.00 0.00 3.24
2774 5516 2.592861 GTCATCCTGCCGCCATCC 60.593 66.667 0.00 0.00 0.00 3.51
2775 5517 2.592861 GGTCATCCTGCCGCCATC 60.593 66.667 0.00 0.00 0.00 3.51
2776 5518 4.552365 CGGTCATCCTGCCGCCAT 62.552 66.667 0.00 0.00 41.53 4.40
2783 5525 4.838152 CACGCCCCGGTCATCCTG 62.838 72.222 0.00 0.00 0.00 3.86
2813 5555 1.717077 ACACCTCCTTGTCCTCCTCTA 59.283 52.381 0.00 0.00 0.00 2.43
3149 5891 1.075482 CCATGGTCCACAGCAAGGT 59.925 57.895 2.57 0.00 34.72 3.50
3150 5892 1.075482 ACCATGGTCCACAGCAAGG 59.925 57.895 13.00 0.00 43.28 3.61
3151 5893 1.246056 CCACCATGGTCCACAGCAAG 61.246 60.000 16.53 0.00 32.53 4.01
3152 5894 1.228521 CCACCATGGTCCACAGCAA 60.229 57.895 16.53 0.00 32.53 3.91
3153 5895 2.435663 CCACCATGGTCCACAGCA 59.564 61.111 16.53 0.00 31.35 4.41
3154 5896 2.361610 CCCACCATGGTCCACAGC 60.362 66.667 16.53 0.00 35.17 4.40
3155 5897 2.361610 GCCCACCATGGTCCACAG 60.362 66.667 16.53 2.86 35.17 3.66
3156 5898 4.343323 CGCCCACCATGGTCCACA 62.343 66.667 16.53 0.00 35.17 4.17
3160 5902 4.820744 ATGCCGCCCACCATGGTC 62.821 66.667 16.53 2.73 35.17 4.02
3186 5928 2.442830 GCTGCCTCCCAAATCCCC 60.443 66.667 0.00 0.00 0.00 4.81
3188 5930 2.044946 ACGCTGCCTCCCAAATCC 60.045 61.111 0.00 0.00 0.00 3.01
3189 5931 0.178068 TAGACGCTGCCTCCCAAATC 59.822 55.000 0.00 0.00 0.00 2.17
3190 5932 0.179000 CTAGACGCTGCCTCCCAAAT 59.821 55.000 0.00 0.00 0.00 2.32
3192 5934 2.359169 CCTAGACGCTGCCTCCCAA 61.359 63.158 0.00 0.00 0.00 4.12
3193 5935 2.759973 CCTAGACGCTGCCTCCCA 60.760 66.667 0.00 0.00 0.00 4.37
3196 5938 0.741221 CAAACCCTAGACGCTGCCTC 60.741 60.000 0.00 0.00 0.00 4.70
3197 5939 1.192146 TCAAACCCTAGACGCTGCCT 61.192 55.000 0.00 0.00 0.00 4.75
3199 5941 1.079503 CTTCAAACCCTAGACGCTGC 58.920 55.000 0.00 0.00 0.00 5.25
3200 5942 1.726853 CCTTCAAACCCTAGACGCTG 58.273 55.000 0.00 0.00 0.00 5.18
3201 5943 0.036294 GCCTTCAAACCCTAGACGCT 60.036 55.000 0.00 0.00 0.00 5.07
3202 5944 0.321298 TGCCTTCAAACCCTAGACGC 60.321 55.000 0.00 0.00 0.00 5.19
3203 5945 1.275291 TCTGCCTTCAAACCCTAGACG 59.725 52.381 0.00 0.00 0.00 4.18
3204 5946 3.536570 GATCTGCCTTCAAACCCTAGAC 58.463 50.000 0.00 0.00 0.00 2.59
3206 5948 2.555199 CGATCTGCCTTCAAACCCTAG 58.445 52.381 0.00 0.00 0.00 3.02
3220 5962 0.739813 GTCCCCGAAACACCGATCTG 60.740 60.000 0.00 0.00 0.00 2.90
3221 5963 1.595357 GTCCCCGAAACACCGATCT 59.405 57.895 0.00 0.00 0.00 2.75
3248 5990 2.844966 GCCTCCCCTCCTATAAATACCC 59.155 54.545 0.00 0.00 0.00 3.69
3289 6031 2.436115 GGCGTACCACTTGCCTCC 60.436 66.667 1.83 0.00 45.40 4.30
3290 6032 2.813908 CGGCGTACCACTTGCCTC 60.814 66.667 0.00 0.00 46.67 4.70
3291 6033 3.307906 TCGGCGTACCACTTGCCT 61.308 61.111 6.85 0.00 46.67 4.75
3304 6046 0.815615 CCTGCCTATCCTTTGTCGGC 60.816 60.000 0.00 0.00 41.06 5.54
3305 6047 0.179045 CCCTGCCTATCCTTTGTCGG 60.179 60.000 0.00 0.00 0.00 4.79
3308 6050 2.291605 GGAAACCCTGCCTATCCTTTGT 60.292 50.000 0.00 0.00 0.00 2.83
3312 6054 0.326238 TCGGAAACCCTGCCTATCCT 60.326 55.000 0.00 0.00 0.00 3.24
3315 6057 4.165372 TCTTTATTCGGAAACCCTGCCTAT 59.835 41.667 0.00 0.00 0.00 2.57
3321 6063 6.911250 AAACATTCTTTATTCGGAAACCCT 57.089 33.333 0.00 0.00 0.00 4.34
3322 6064 6.367695 CCAAAACATTCTTTATTCGGAAACCC 59.632 38.462 0.00 0.00 0.00 4.11
3323 6065 6.926826 ACCAAAACATTCTTTATTCGGAAACC 59.073 34.615 0.00 0.00 0.00 3.27
3324 6066 7.650104 TGACCAAAACATTCTTTATTCGGAAAC 59.350 33.333 0.00 0.00 0.00 2.78
3325 6067 7.717568 TGACCAAAACATTCTTTATTCGGAAA 58.282 30.769 0.00 0.00 0.00 3.13
3326 6068 7.278461 TGACCAAAACATTCTTTATTCGGAA 57.722 32.000 0.00 0.00 0.00 4.30
3327 6069 6.885952 TGACCAAAACATTCTTTATTCGGA 57.114 33.333 0.00 0.00 0.00 4.55
3328 6070 7.938563 TTTGACCAAAACATTCTTTATTCGG 57.061 32.000 0.00 0.00 0.00 4.30
3334 6076 8.242739 CCAACAAATTTGACCAAAACATTCTTT 58.757 29.630 24.64 0.41 33.56 2.52
3335 6077 7.148103 CCCAACAAATTTGACCAAAACATTCTT 60.148 33.333 24.64 0.85 33.56 2.52
3336 6078 6.318396 CCCAACAAATTTGACCAAAACATTCT 59.682 34.615 24.64 0.00 33.56 2.40
3337 6079 6.317391 TCCCAACAAATTTGACCAAAACATTC 59.683 34.615 24.64 0.00 33.56 2.67
3338 6080 6.183347 TCCCAACAAATTTGACCAAAACATT 58.817 32.000 24.64 2.29 33.56 2.71
3339 6081 5.749462 TCCCAACAAATTTGACCAAAACAT 58.251 33.333 24.64 0.00 33.56 2.71
3340 6082 5.165961 TCCCAACAAATTTGACCAAAACA 57.834 34.783 24.64 0.00 33.56 2.83
3341 6083 6.502136 TTTCCCAACAAATTTGACCAAAAC 57.498 33.333 24.64 0.00 33.56 2.43
3342 6084 8.049721 ACTATTTCCCAACAAATTTGACCAAAA 58.950 29.630 24.64 15.94 33.56 2.44
3343 6085 7.569240 ACTATTTCCCAACAAATTTGACCAAA 58.431 30.769 24.64 14.20 34.46 3.28
3344 6086 7.130681 ACTATTTCCCAACAAATTTGACCAA 57.869 32.000 24.64 8.41 0.00 3.67
3345 6087 6.739331 ACTATTTCCCAACAAATTTGACCA 57.261 33.333 24.64 1.07 0.00 4.02
3346 6088 7.713073 TGAAACTATTTCCCAACAAATTTGACC 59.287 33.333 24.64 0.00 38.90 4.02
3347 6089 8.655651 TGAAACTATTTCCCAACAAATTTGAC 57.344 30.769 24.64 0.00 38.90 3.18
3348 6090 8.700051 TCTGAAACTATTTCCCAACAAATTTGA 58.300 29.630 24.64 0.36 38.90 2.69
3349 6091 8.885494 TCTGAAACTATTTCCCAACAAATTTG 57.115 30.769 16.67 16.67 38.90 2.32
3350 6092 8.150296 CCTCTGAAACTATTTCCCAACAAATTT 58.850 33.333 0.00 0.00 38.90 1.82
3351 6093 7.290014 ACCTCTGAAACTATTTCCCAACAAATT 59.710 33.333 0.00 0.00 38.90 1.82
3352 6094 6.782494 ACCTCTGAAACTATTTCCCAACAAAT 59.218 34.615 0.00 0.00 38.90 2.32
3353 6095 6.040391 CACCTCTGAAACTATTTCCCAACAAA 59.960 38.462 0.00 0.00 38.90 2.83
3354 6096 5.534654 CACCTCTGAAACTATTTCCCAACAA 59.465 40.000 0.00 0.00 38.90 2.83
3355 6097 5.070001 CACCTCTGAAACTATTTCCCAACA 58.930 41.667 0.00 0.00 38.90 3.33
3356 6098 4.459337 CCACCTCTGAAACTATTTCCCAAC 59.541 45.833 0.00 0.00 38.90 3.77
3357 6099 4.508405 CCCACCTCTGAAACTATTTCCCAA 60.508 45.833 0.00 0.00 38.90 4.12
3358 6100 3.010138 CCCACCTCTGAAACTATTTCCCA 59.990 47.826 0.00 0.00 38.90 4.37
3359 6101 3.010250 ACCCACCTCTGAAACTATTTCCC 59.990 47.826 0.00 0.00 38.90 3.97
3360 6102 4.019231 AGACCCACCTCTGAAACTATTTCC 60.019 45.833 0.00 0.00 38.90 3.13
3361 6103 5.046231 AGAGACCCACCTCTGAAACTATTTC 60.046 44.000 0.00 0.00 41.63 2.17
3362 6104 4.846940 AGAGACCCACCTCTGAAACTATTT 59.153 41.667 0.00 0.00 41.63 1.40
3363 6105 4.430441 AGAGACCCACCTCTGAAACTATT 58.570 43.478 0.00 0.00 41.63 1.73
3364 6106 4.067944 AGAGACCCACCTCTGAAACTAT 57.932 45.455 0.00 0.00 41.63 2.12
3365 6107 3.544698 AGAGACCCACCTCTGAAACTA 57.455 47.619 0.00 0.00 41.63 2.24
3366 6108 2.407340 AGAGACCCACCTCTGAAACT 57.593 50.000 0.00 0.00 41.63 2.66
3372 6114 0.252012 CACCTCAGAGACCCACCTCT 60.252 60.000 0.00 0.00 43.84 3.69
3373 6115 0.543174 ACACCTCAGAGACCCACCTC 60.543 60.000 0.00 0.00 0.00 3.85
3374 6116 0.104934 AACACCTCAGAGACCCACCT 60.105 55.000 0.00 0.00 0.00 4.00
3375 6117 0.765510 AAACACCTCAGAGACCCACC 59.234 55.000 0.00 0.00 0.00 4.61
3376 6118 3.665190 CTTAAACACCTCAGAGACCCAC 58.335 50.000 0.00 0.00 0.00 4.61
3377 6119 2.038557 GCTTAAACACCTCAGAGACCCA 59.961 50.000 0.00 0.00 0.00 4.51
3378 6120 2.303311 AGCTTAAACACCTCAGAGACCC 59.697 50.000 0.00 0.00 0.00 4.46
3379 6121 3.686916 AGCTTAAACACCTCAGAGACC 57.313 47.619 0.00 0.00 0.00 3.85
3380 6122 5.349824 CAAAGCTTAAACACCTCAGAGAC 57.650 43.478 0.00 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.