Multiple sequence alignment - TraesCS3D01G507900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G507900 chr3D 100.000 7126 0 0 1 7126 594196885 594204010 0.000000e+00 13160.0
1 TraesCS3D01G507900 chr3D 89.362 658 45 6 1516 2155 228932890 228932240 0.000000e+00 804.0
2 TraesCS3D01G507900 chr3D 84.826 402 40 15 113 501 593998270 593997877 1.120000e-102 385.0
3 TraesCS3D01G507900 chr3D 82.741 394 32 14 1051 1432 228933312 228932943 1.150000e-82 318.0
4 TraesCS3D01G507900 chr3D 81.659 229 30 8 4458 4676 594072055 594071829 5.680000e-41 180.0
5 TraesCS3D01G507900 chr3D 75.131 382 51 23 5774 6139 594483786 594483433 9.640000e-29 139.0
6 TraesCS3D01G507900 chr3D 98.551 69 1 0 3058 3126 594199873 594199941 9.710000e-24 122.0
7 TraesCS3D01G507900 chr3D 98.551 69 1 0 2989 3057 594199942 594200010 9.710000e-24 122.0
8 TraesCS3D01G507900 chr3A 91.296 2654 133 49 3635 6260 724872541 724869958 0.000000e+00 3531.0
9 TraesCS3D01G507900 chr3A 85.197 2209 191 71 890 3023 724875614 724873467 0.000000e+00 2143.0
10 TraesCS3D01G507900 chr3A 96.133 543 19 1 3089 3631 724873345 724872805 0.000000e+00 885.0
11 TraesCS3D01G507900 chr3A 80.737 353 32 15 123 468 724876512 724876189 7.140000e-60 243.0
12 TraesCS3D01G507900 chr3A 82.042 284 38 10 4404 4677 724828096 724827816 5.560000e-56 230.0
13 TraesCS3D01G507900 chr3A 87.786 131 10 3 502 632 724875994 724875870 1.600000e-31 148.0
14 TraesCS3D01G507900 chr3A 82.390 159 27 1 6314 6472 345660496 345660339 3.470000e-28 137.0
15 TraesCS3D01G507900 chr3A 83.594 128 12 6 6016 6139 725061583 725061461 2.100000e-20 111.0
16 TraesCS3D01G507900 chr3A 85.455 110 8 4 1 110 724876783 724876682 2.720000e-19 108.0
17 TraesCS3D01G507900 chr3A 100.000 39 0 0 3019 3057 724873346 724873308 9.920000e-09 73.1
18 TraesCS3D01G507900 chr3A 97.143 35 1 0 3058 3092 724873501 724873467 7.720000e-05 60.2
19 TraesCS3D01G507900 chr3B 90.347 2652 156 56 3642 6273 797455788 797458359 0.000000e+00 3387.0
20 TraesCS3D01G507900 chr3B 90.353 2208 137 32 890 3057 797453141 797455312 0.000000e+00 2828.0
21 TraesCS3D01G507900 chr3B 95.993 574 19 3 3059 3632 797455246 797455815 0.000000e+00 929.0
22 TraesCS3D01G507900 chr3B 83.077 520 29 16 113 612 797452420 797452900 1.110000e-112 418.0
23 TraesCS3D01G507900 chr3B 79.577 142 19 7 6016 6152 797721237 797721101 7.610000e-15 93.5
24 TraesCS3D01G507900 chr5A 88.295 786 72 12 1516 2287 503647852 503648631 0.000000e+00 924.0
25 TraesCS3D01G507900 chr5A 86.186 485 48 14 1527 1998 503006708 503006230 2.290000e-139 507.0
26 TraesCS3D01G507900 chr5D 92.759 511 31 5 1647 2156 35970948 35971453 0.000000e+00 734.0
27 TraesCS3D01G507900 chr5D 87.097 62 8 0 6873 6934 275403909 275403970 3.570000e-08 71.3
28 TraesCS3D01G507900 chr6B 95.802 405 13 3 6722 7123 633526693 633527096 0.000000e+00 651.0
29 TraesCS3D01G507900 chr6B 93.846 260 14 1 6291 6550 633526107 633526364 2.410000e-104 390.0
30 TraesCS3D01G507900 chr6B 81.081 185 33 2 6291 6474 644471017 644470834 5.760000e-31 147.0
31 TraesCS3D01G507900 chr7B 88.104 538 48 12 1524 2049 481552346 481551813 6.070000e-175 625.0
32 TraesCS3D01G507900 chr7B 78.151 238 41 9 6293 6526 569483736 569483506 2.680000e-29 141.0
33 TraesCS3D01G507900 chr7D 90.644 481 27 7 1690 2156 636360802 636360326 2.180000e-174 623.0
34 TraesCS3D01G507900 chr7D 86.441 59 8 0 6876 6934 38662243 38662185 1.660000e-06 65.8
35 TraesCS3D01G507900 chr1A 87.010 485 44 13 1527 1998 277920161 277919683 4.900000e-146 529.0
36 TraesCS3D01G507900 chr1A 93.789 161 9 1 6295 6455 392080365 392080524 2.570000e-59 241.0
37 TraesCS3D01G507900 chr1A 82.320 181 26 6 6292 6469 401220300 401220477 1.240000e-32 152.0
38 TraesCS3D01G507900 chr7A 86.892 473 37 15 113 573 92391488 92391947 2.290000e-139 507.0
39 TraesCS3D01G507900 chr7A 85.540 491 48 15 1527 1998 4724548 4724062 6.420000e-135 492.0
40 TraesCS3D01G507900 chr7A 83.784 111 4 5 649 745 92391976 92392086 7.610000e-15 93.5
41 TraesCS3D01G507900 chr1B 85.349 430 41 16 1521 1935 677150472 677150894 6.610000e-115 425.0
42 TraesCS3D01G507900 chr1B 85.789 190 23 4 6287 6474 259791085 259791272 1.570000e-46 198.0
43 TraesCS3D01G507900 chr1B 80.292 137 16 4 6808 6934 374314512 374314647 7.610000e-15 93.5
44 TraesCS3D01G507900 chr5B 83.651 367 40 14 1524 1876 616121820 616121460 1.920000e-85 327.0
45 TraesCS3D01G507900 chr5B 87.097 62 8 0 6873 6934 81188283 81188344 3.570000e-08 71.3
46 TraesCS3D01G507900 chr6D 91.866 209 17 0 1948 2156 436933415 436933623 6.990000e-75 292.0
47 TraesCS3D01G507900 chr6D 91.866 209 17 0 1948 2156 468894978 468895186 6.990000e-75 292.0
48 TraesCS3D01G507900 chr4D 91.866 209 17 0 1948 2156 221422178 221422386 6.990000e-75 292.0
49 TraesCS3D01G507900 chr2A 78.632 351 58 12 114 464 526303818 526304151 4.330000e-52 217.0
50 TraesCS3D01G507900 chr6A 82.222 180 31 1 6293 6472 375060191 375060369 3.440000e-33 154.0
51 TraesCS3D01G507900 chr6A 81.111 180 32 2 6293 6472 375008859 375009036 7.450000e-30 143.0
52 TraesCS3D01G507900 chr2D 83.893 149 22 2 6973 7120 605339072 605339219 2.680000e-29 141.0
53 TraesCS3D01G507900 chr2D 88.136 59 7 0 6876 6934 481146541 481146483 3.570000e-08 71.3
54 TraesCS3D01G507900 chrUn 75.131 382 51 23 5774 6139 45788696 45788343 9.640000e-29 139.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G507900 chr3D 594196885 594204010 7125 False 13160.0000 13160 100.000000 1 7126 1 chr3D.!!$F1 7125
1 TraesCS3D01G507900 chr3D 228932240 228933312 1072 True 561.0000 804 86.051500 1051 2155 2 chr3D.!!$R4 1104
2 TraesCS3D01G507900 chr3A 724869958 724876783 6825 True 898.9125 3531 90.468375 1 6260 8 chr3A.!!$R4 6259
3 TraesCS3D01G507900 chr3B 797452420 797458359 5939 False 1890.5000 3387 89.942500 113 6273 4 chr3B.!!$F1 6160
4 TraesCS3D01G507900 chr5A 503647852 503648631 779 False 924.0000 924 88.295000 1516 2287 1 chr5A.!!$F1 771
5 TraesCS3D01G507900 chr5D 35970948 35971453 505 False 734.0000 734 92.759000 1647 2156 1 chr5D.!!$F1 509
6 TraesCS3D01G507900 chr6B 633526107 633527096 989 False 520.5000 651 94.824000 6291 7123 2 chr6B.!!$F1 832
7 TraesCS3D01G507900 chr7B 481551813 481552346 533 True 625.0000 625 88.104000 1524 2049 1 chr7B.!!$R1 525
8 TraesCS3D01G507900 chr7A 92391488 92392086 598 False 300.2500 507 85.338000 113 745 2 chr7A.!!$F1 632

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
757 1132 0.110486 AATCAAACGGAGGCTGGTGT 59.890 50.000 0.00 0.0 0.00 4.16 F
1349 1809 0.308684 GGTTTCGACGGGTTTGTTCC 59.691 55.000 0.00 0.0 0.00 3.62 F
1458 1923 0.544595 ACTCGTTAGGCCTGTTCCCT 60.545 55.000 17.99 0.0 36.47 4.20 F
2264 2821 0.899717 TTGATTCTTGCCCTGCACCC 60.900 55.000 0.00 0.0 38.71 4.61 F
3315 3941 0.394216 TGGATCGGGCATGAAAGTGG 60.394 55.000 0.00 0.0 0.00 4.00 F
4088 4975 1.004862 CCTCCTCCCCCAAAAAGAGAC 59.995 57.143 0.00 0.0 0.00 3.36 F
5421 6314 0.603707 TCCAAGAAAGGTGAGCGCAG 60.604 55.000 11.47 0.0 0.00 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2559 3122 1.123077 CTGTGTAGATAGCAGGGCCA 58.877 55.000 6.18 0.0 0.00 5.36 R
2917 3487 0.537371 ACCAAGGCACCAACAGTAGC 60.537 55.000 0.00 0.0 0.00 3.58 R
3287 3913 0.690192 TGCCCGATCCACAGAAGAAA 59.310 50.000 0.00 0.0 0.00 2.52 R
4067 4954 0.332972 CTCTTTTTGGGGGAGGAGGG 59.667 60.000 0.00 0.0 0.00 4.30 R
4613 5506 1.001248 CCCCTCCTAAGGTGACGGA 59.999 63.158 0.00 0.0 41.59 4.69 R
5680 6617 0.106819 AGGCCTGAGACATGCCATTC 60.107 55.000 3.11 0.0 45.39 2.67 R
6656 7648 0.038159 GGACTGGTGTGGAAGAGACG 60.038 60.000 0.00 0.0 0.00 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 2.202783 GCGCCACAATGCCCATTC 60.203 61.111 0.00 0.00 0.00 2.67
37 38 2.220653 TGCCCATTCCCTTTTCTCAG 57.779 50.000 0.00 0.00 0.00 3.35
41 42 3.879321 GCCCATTCCCTTTTCTCAGACAT 60.879 47.826 0.00 0.00 0.00 3.06
46 47 4.038271 TCCCTTTTCTCAGACATGCATT 57.962 40.909 0.00 0.00 0.00 3.56
47 48 3.760151 TCCCTTTTCTCAGACATGCATTG 59.240 43.478 0.00 0.00 0.00 2.82
48 49 3.760151 CCCTTTTCTCAGACATGCATTGA 59.240 43.478 0.00 0.00 0.00 2.57
49 50 4.380233 CCCTTTTCTCAGACATGCATTGAC 60.380 45.833 0.00 0.00 0.00 3.18
50 51 4.216902 CCTTTTCTCAGACATGCATTGACA 59.783 41.667 0.00 0.00 0.00 3.58
51 52 5.366829 TTTTCTCAGACATGCATTGACAG 57.633 39.130 0.00 0.00 0.00 3.51
53 54 3.332034 TCTCAGACATGCATTGACAGTG 58.668 45.455 0.00 0.00 0.00 3.66
54 55 3.072211 CTCAGACATGCATTGACAGTGT 58.928 45.455 0.00 0.00 0.00 3.55
55 56 2.809696 TCAGACATGCATTGACAGTGTG 59.190 45.455 0.00 0.21 0.00 3.82
56 57 2.551032 CAGACATGCATTGACAGTGTGT 59.449 45.455 0.00 0.00 0.00 3.72
57 58 3.004002 CAGACATGCATTGACAGTGTGTT 59.996 43.478 0.00 0.00 0.00 3.32
58 59 3.004002 AGACATGCATTGACAGTGTGTTG 59.996 43.478 0.00 0.00 0.00 3.33
59 60 2.055838 CATGCATTGACAGTGTGTTGC 58.944 47.619 0.00 7.60 33.53 4.17
60 61 1.391577 TGCATTGACAGTGTGTTGCT 58.608 45.000 17.62 0.00 33.93 3.91
61 62 1.065851 TGCATTGACAGTGTGTTGCTG 59.934 47.619 17.62 0.00 33.93 4.41
72 73 3.380320 AGTGTGTTGCTGAAAAGTTACCC 59.620 43.478 0.00 0.00 0.00 3.69
165 324 1.729517 CCACATTACACGCGACATTGA 59.270 47.619 15.93 0.00 0.00 2.57
168 327 3.306973 CACATTACACGCGACATTGATCT 59.693 43.478 15.93 0.00 0.00 2.75
235 411 1.636148 AATGGCATGGCTTCAAGTGT 58.364 45.000 21.08 0.00 0.00 3.55
236 412 1.180029 ATGGCATGGCTTCAAGTGTC 58.820 50.000 21.08 0.00 0.00 3.67
241 417 1.955778 CATGGCTTCAAGTGTCACCAA 59.044 47.619 0.00 0.00 0.00 3.67
248 424 4.378874 GCTTCAAGTGTCACCAATAGAAGC 60.379 45.833 19.99 19.99 46.35 3.86
264 440 3.067106 AGAAGCGTGTGAAATACCACAG 58.933 45.455 0.00 0.00 46.42 3.66
267 443 3.323243 AGCGTGTGAAATACCACAGTAC 58.677 45.455 0.00 0.00 46.42 2.73
380 556 5.129634 ACAAGATCTTCGAGAGATGCTAGA 58.870 41.667 4.57 0.00 45.17 2.43
381 557 5.769662 ACAAGATCTTCGAGAGATGCTAGAT 59.230 40.000 4.57 3.73 45.17 1.98
383 559 3.913548 TCTTCGAGAGATGCTAGATGC 57.086 47.619 0.00 0.00 41.60 3.91
385 561 0.877743 TCGAGAGATGCTAGATGCCG 59.122 55.000 0.00 0.00 36.41 5.69
386 562 0.732196 CGAGAGATGCTAGATGCCGC 60.732 60.000 0.00 0.00 42.00 6.53
387 563 0.316522 GAGAGATGCTAGATGCCGCA 59.683 55.000 0.00 0.00 42.00 5.69
388 564 0.755079 AGAGATGCTAGATGCCGCAA 59.245 50.000 0.00 0.00 39.89 4.85
389 565 1.139654 AGAGATGCTAGATGCCGCAAA 59.860 47.619 0.00 0.00 39.89 3.68
390 566 1.530293 GAGATGCTAGATGCCGCAAAG 59.470 52.381 0.00 0.00 39.89 2.77
391 567 0.590195 GATGCTAGATGCCGCAAAGG 59.410 55.000 0.00 0.00 39.89 3.11
483 681 1.534595 GGACGGACGTGCGTACATAAT 60.535 52.381 35.76 13.13 0.00 1.28
488 686 1.591158 GACGTGCGTACATAATGGTGG 59.409 52.381 4.09 0.00 0.00 4.61
496 699 4.617298 GCGTACATAATGGTGGCACTTTTT 60.617 41.667 18.45 10.94 0.00 1.94
623 982 2.287788 CGCAATGCTGATATGTTTCCCC 60.288 50.000 2.94 0.00 0.00 4.81
627 986 5.068987 GCAATGCTGATATGTTTCCCCTAAA 59.931 40.000 0.00 0.00 0.00 1.85
632 991 7.582719 TGCTGATATGTTTCCCCTAAATAACT 58.417 34.615 0.00 0.00 0.00 2.24
633 992 8.058847 TGCTGATATGTTTCCCCTAAATAACTT 58.941 33.333 0.00 0.00 0.00 2.66
634 993 8.568794 GCTGATATGTTTCCCCTAAATAACTTC 58.431 37.037 0.00 0.00 0.00 3.01
635 994 9.853177 CTGATATGTTTCCCCTAAATAACTTCT 57.147 33.333 0.00 0.00 0.00 2.85
700 1059 1.942657 CCATGCCCTCTTACAATGACG 59.057 52.381 0.00 0.00 0.00 4.35
701 1060 2.419990 CCATGCCCTCTTACAATGACGA 60.420 50.000 0.00 0.00 0.00 4.20
702 1061 3.270027 CATGCCCTCTTACAATGACGAA 58.730 45.455 0.00 0.00 0.00 3.85
747 1122 7.295201 TCGAAAGATTCTACAAAATCAAACGG 58.705 34.615 0.00 0.00 37.98 4.44
748 1123 7.171848 TCGAAAGATTCTACAAAATCAAACGGA 59.828 33.333 0.00 0.00 37.98 4.69
757 1132 0.110486 AATCAAACGGAGGCTGGTGT 59.890 50.000 0.00 0.00 0.00 4.16
760 1148 2.752807 AAACGGAGGCTGGTGTGGT 61.753 57.895 0.00 0.00 0.00 4.16
804 1192 3.057174 ACAAACTTGAACTGGCGTTTTCA 60.057 39.130 0.00 0.00 32.39 2.69
806 1194 4.385358 AACTTGAACTGGCGTTTTCAAT 57.615 36.364 8.01 0.00 40.16 2.57
885 1273 2.443255 TGCAAGAAAAAGACTCCCTCCT 59.557 45.455 0.00 0.00 0.00 3.69
886 1274 2.816672 GCAAGAAAAAGACTCCCTCCTG 59.183 50.000 0.00 0.00 0.00 3.86
887 1275 3.748989 GCAAGAAAAAGACTCCCTCCTGT 60.749 47.826 0.00 0.00 0.00 4.00
888 1276 4.505039 GCAAGAAAAAGACTCCCTCCTGTA 60.505 45.833 0.00 0.00 0.00 2.74
957 1383 4.517934 CGCCCCGTCCTCCCTCTA 62.518 72.222 0.00 0.00 0.00 2.43
981 1413 2.845970 TTACCCCATCCATATCCCCA 57.154 50.000 0.00 0.00 0.00 4.96
1023 1455 2.040884 CCCCTCTCCATCCCCGAA 60.041 66.667 0.00 0.00 0.00 4.30
1025 1457 1.383248 CCCTCTCCATCCCCGAACT 60.383 63.158 0.00 0.00 0.00 3.01
1030 1462 2.107141 CCATCCCCGAACTCTCGC 59.893 66.667 0.00 0.00 44.04 5.03
1229 1678 2.554636 CCAAGCGCAGGTGAGCAAA 61.555 57.895 11.47 0.00 43.47 3.68
1327 1787 3.373565 CTGGGGTTTTGGGCGCTC 61.374 66.667 7.64 2.47 0.00 5.03
1331 1791 3.431725 GGTTTTGGGCGCTCGAGG 61.432 66.667 15.58 5.53 0.00 4.63
1334 1794 1.527380 TTTTGGGCGCTCGAGGTTT 60.527 52.632 15.58 0.00 0.00 3.27
1335 1795 1.512156 TTTTGGGCGCTCGAGGTTTC 61.512 55.000 15.58 0.00 0.00 2.78
1349 1809 0.308684 GGTTTCGACGGGTTTGTTCC 59.691 55.000 0.00 0.00 0.00 3.62
1440 1900 4.404098 ATGGTTCCCGCGGTGGAC 62.404 66.667 26.12 19.55 42.00 4.02
1442 1902 4.754667 GGTTCCCGCGGTGGACTC 62.755 72.222 26.12 10.45 42.00 3.36
1446 1906 3.751246 CCCGCGGTGGACTCGTTA 61.751 66.667 26.12 0.00 42.00 3.18
1447 1907 2.202570 CCGCGGTGGACTCGTTAG 60.203 66.667 19.50 0.00 42.00 2.34
1448 1908 2.202570 CGCGGTGGACTCGTTAGG 60.203 66.667 0.00 0.00 0.00 2.69
1458 1923 0.544595 ACTCGTTAGGCCTGTTCCCT 60.545 55.000 17.99 0.00 36.47 4.20
1464 1929 1.663911 TAGGCCTGTTCCCTTGCTTA 58.336 50.000 17.99 0.00 33.88 3.09
1479 1949 1.879380 TGCTTATCCAACACTGTGTGC 59.121 47.619 15.11 11.76 36.98 4.57
1486 1956 2.495270 TCCAACACTGTGTGCATGTTTT 59.505 40.909 15.11 0.00 36.98 2.43
1522 2004 1.305381 AAGGCTCGGAGTAGTGGCT 60.305 57.895 6.90 0.00 41.27 4.75
1529 2011 2.820037 GAGTAGTGGCTTGCGGGC 60.820 66.667 0.00 0.00 41.27 6.13
1556 2038 2.592001 TGCGCTTACGTTTGGCCA 60.592 55.556 9.73 0.00 42.83 5.36
1690 2210 3.325135 GTGCTAATGCTGGGGTAGATAGT 59.675 47.826 0.00 0.00 40.48 2.12
1691 2211 3.973973 TGCTAATGCTGGGGTAGATAGTT 59.026 43.478 0.00 0.00 40.48 2.24
1740 2267 4.691216 CAGTTTCTAGACAACTTAGCACCC 59.309 45.833 14.04 0.00 31.83 4.61
1827 2354 8.922058 ATTCTGATTGCAAATTTATGTGTCTC 57.078 30.769 1.71 0.00 0.00 3.36
1833 2372 6.000891 TGCAAATTTATGTGTCTCTGTGTC 57.999 37.500 0.00 0.00 0.00 3.67
1852 2394 4.455533 GTGTCTGTCCTGCATGTTTCATTA 59.544 41.667 0.00 0.00 0.00 1.90
1853 2395 5.124457 GTGTCTGTCCTGCATGTTTCATTAT 59.876 40.000 0.00 0.00 0.00 1.28
1854 2396 5.711506 TGTCTGTCCTGCATGTTTCATTATT 59.288 36.000 0.00 0.00 0.00 1.40
1904 2447 5.131142 AGTTCTCCTGGGATCGAACAATATT 59.869 40.000 17.88 0.00 38.50 1.28
1919 2462 7.748683 TCGAACAATATTGATACAGTTTTGTGC 59.251 33.333 22.16 0.00 38.23 4.57
2069 2617 2.357637 TGTTTGTTAGCTGCTTGGTGTC 59.642 45.455 7.79 0.00 0.00 3.67
2081 2629 4.808558 TGCTTGGTGTCAGCATTTAAATC 58.191 39.130 5.39 0.00 33.24 2.17
2125 2678 1.598130 GGTCTGTGGTGGTCTGCAC 60.598 63.158 0.00 0.00 0.00 4.57
2126 2679 1.598130 GTCTGTGGTGGTCTGCACC 60.598 63.158 0.00 0.00 44.10 5.01
2163 2716 7.672239 ACCAAGCATCCTATTTAAGTTTAACCA 59.328 33.333 0.00 0.00 0.00 3.67
2254 2811 5.994054 TCTCTGAGTTCCAGTTTGATTCTTG 59.006 40.000 4.32 0.00 43.38 3.02
2264 2821 0.899717 TTGATTCTTGCCCTGCACCC 60.900 55.000 0.00 0.00 38.71 4.61
2267 2824 3.842925 TTCTTGCCCTGCACCCGTC 62.843 63.158 0.00 0.00 38.71 4.79
2325 2885 5.046231 AGGACCAGTTCAATACCTCTTCTTC 60.046 44.000 0.00 0.00 0.00 2.87
2327 2887 5.552178 ACCAGTTCAATACCTCTTCTTCAC 58.448 41.667 0.00 0.00 0.00 3.18
2331 2891 6.367422 CAGTTCAATACCTCTTCTTCACAGTC 59.633 42.308 0.00 0.00 0.00 3.51
2355 2915 6.547880 TCCTAGATGAACCAGATCTTACTGAC 59.452 42.308 0.00 0.00 39.94 3.51
2376 2936 6.572519 TGACACCAATTCCTTCTTCTTTTTG 58.427 36.000 0.00 0.00 0.00 2.44
2381 2941 5.698089 CCAATTCCTTCTTCTTTTTGCCTTC 59.302 40.000 0.00 0.00 0.00 3.46
2399 2959 4.857037 GCCTTCTAAACCATTGCTTTAACG 59.143 41.667 0.00 0.00 0.00 3.18
2422 2982 4.383649 GTGTCATTGTTGCTGCTGTAATTG 59.616 41.667 0.00 0.00 0.00 2.32
2466 3027 3.003480 GCTCATACTCAAAGTCGCCTTT 58.997 45.455 0.00 0.00 41.62 3.11
2467 3028 3.437049 GCTCATACTCAAAGTCGCCTTTT 59.563 43.478 0.00 0.00 38.87 2.27
2663 3226 1.053264 AAGGCCGCTCATCATCTCCT 61.053 55.000 0.00 0.00 0.00 3.69
2847 3412 7.984002 TGGTATTTATTTGATGCATTTGTCG 57.016 32.000 0.00 0.00 0.00 4.35
2849 3414 6.420604 GGTATTTATTTGATGCATTTGTCGGG 59.579 38.462 0.00 0.00 0.00 5.14
2850 3415 5.651387 TTTATTTGATGCATTTGTCGGGA 57.349 34.783 0.00 0.00 0.00 5.14
2851 3416 5.850557 TTATTTGATGCATTTGTCGGGAT 57.149 34.783 0.00 0.00 0.00 3.85
2852 3417 4.741321 ATTTGATGCATTTGTCGGGATT 57.259 36.364 0.00 0.00 0.00 3.01
2853 3418 5.850557 ATTTGATGCATTTGTCGGGATTA 57.149 34.783 0.00 0.00 0.00 1.75
2854 3419 4.630894 TTGATGCATTTGTCGGGATTAC 57.369 40.909 0.00 0.00 0.00 1.89
2855 3420 2.611751 TGATGCATTTGTCGGGATTACG 59.388 45.455 0.00 0.00 0.00 3.18
2862 3432 1.694844 TGTCGGGATTACGATGCCTA 58.305 50.000 0.00 0.00 45.47 3.93
2864 3434 3.423749 TGTCGGGATTACGATGCCTATA 58.576 45.455 0.00 0.00 45.47 1.31
2896 3466 7.445096 CCCATTATTTTTGAGCTTTTCCAGTTT 59.555 33.333 0.00 0.00 0.00 2.66
2950 3520 1.086696 CTTGGTGGCATTACTGACCG 58.913 55.000 0.00 0.00 0.00 4.79
2964 3534 1.257936 CTGACCGTGTTGTTTCTGTCG 59.742 52.381 0.00 0.00 0.00 4.35
2971 3541 2.033151 GTGTTGTTTCTGTCGCTGGTAC 60.033 50.000 0.00 0.00 0.00 3.34
2974 3544 2.479837 TGTTTCTGTCGCTGGTACTTG 58.520 47.619 0.00 0.00 0.00 3.16
3017 3587 5.882000 TGTGCTCTCTTGTTATGCATGTAAT 59.118 36.000 10.16 0.00 36.04 1.89
3035 3605 8.909708 CATGTAATGTACTTACCAAATTGGTG 57.090 34.615 26.55 13.83 45.27 4.17
3036 3606 7.487829 CATGTAATGTACTTACCAAATTGGTGC 59.512 37.037 26.55 11.92 45.27 5.01
3047 3617 4.942852 CCAAATTGGTGCTACTTGTTTCA 58.057 39.130 3.34 0.00 31.35 2.69
3048 3618 4.984161 CCAAATTGGTGCTACTTGTTTCAG 59.016 41.667 3.34 0.00 31.35 3.02
3049 3619 4.853924 AATTGGTGCTACTTGTTTCAGG 57.146 40.909 0.00 0.00 0.00 3.86
3053 3623 3.882888 TGGTGCTACTTGTTTCAGGAAAG 59.117 43.478 0.00 0.00 0.00 2.62
3054 3624 3.304726 GGTGCTACTTGTTTCAGGAAAGC 60.305 47.826 0.00 0.00 0.00 3.51
3055 3625 3.315191 GTGCTACTTGTTTCAGGAAAGCA 59.685 43.478 0.00 0.00 33.68 3.91
3056 3626 4.022849 GTGCTACTTGTTTCAGGAAAGCAT 60.023 41.667 6.99 0.00 36.32 3.79
3058 3628 4.919754 GCTACTTGTTTCAGGAAAGCATTG 59.080 41.667 0.00 0.00 0.00 2.82
3059 3629 5.507985 GCTACTTGTTTCAGGAAAGCATTGT 60.508 40.000 0.00 3.18 0.00 2.71
3061 3631 6.655078 ACTTGTTTCAGGAAAGCATTGTAT 57.345 33.333 0.00 0.00 0.00 2.29
3062 3632 7.054491 ACTTGTTTCAGGAAAGCATTGTATT 57.946 32.000 0.00 0.00 0.00 1.89
3064 3634 6.403866 TGTTTCAGGAAAGCATTGTATTGT 57.596 33.333 0.00 0.00 0.00 2.71
3065 3635 6.215121 TGTTTCAGGAAAGCATTGTATTGTG 58.785 36.000 0.00 0.00 0.00 3.33
3066 3636 4.439305 TCAGGAAAGCATTGTATTGTGC 57.561 40.909 0.00 0.00 41.57 4.57
3074 3644 4.691860 GCATTGTATTGTGCTCTCTTGT 57.308 40.909 0.00 0.00 38.30 3.16
3286 3912 6.423862 TGTGCAACTTTTATCGACAACTTAC 58.576 36.000 0.00 0.00 38.04 2.34
3287 3913 6.259167 TGTGCAACTTTTATCGACAACTTACT 59.741 34.615 0.00 0.00 38.04 2.24
3315 3941 0.394216 TGGATCGGGCATGAAAGTGG 60.394 55.000 0.00 0.00 0.00 4.00
3416 4042 8.907222 TCATCATTAATCAATTTCATCGGAGA 57.093 30.769 0.00 0.00 45.75 3.71
3541 4167 6.017109 GCTTTGTTCTAAGTCCTGTTCATGAA 60.017 38.462 3.38 3.38 0.00 2.57
3555 4181 5.299148 TGTTCATGAAAGCAATTTTGAGGG 58.701 37.500 10.35 0.00 0.00 4.30
3556 4182 5.163322 TGTTCATGAAAGCAATTTTGAGGGT 60.163 36.000 10.35 0.00 0.00 4.34
3592 4218 4.393834 TCGGAACAATGATCTGTTTTCCA 58.606 39.130 13.63 0.00 39.63 3.53
3631 4257 8.367911 CACAGTATAATGAGCTAACCATCCTTA 58.632 37.037 7.27 0.00 0.00 2.69
3633 4259 8.037758 CAGTATAATGAGCTAACCATCCTTAGG 58.962 40.741 0.00 0.00 0.00 2.69
4067 4954 2.871453 TCTTCACCTTTAAAGCCACCC 58.129 47.619 9.86 0.00 0.00 4.61
4088 4975 1.004862 CCTCCTCCCCCAAAAAGAGAC 59.995 57.143 0.00 0.00 0.00 3.36
4169 5056 3.265791 GGGATGTAAGTGTCTGAAGCTG 58.734 50.000 0.00 0.00 0.00 4.24
4244 5131 7.917505 GTGATCTGGTTCTTTAATAAGCATTGG 59.082 37.037 0.00 0.00 34.17 3.16
4273 5160 8.386264 CCATCTAGGATAATTTGTAGGTGGATT 58.614 37.037 1.87 0.00 43.80 3.01
4351 5240 2.377136 GAAGCCACCTTCTCCTCCA 58.623 57.895 0.00 0.00 43.31 3.86
4556 5445 3.009723 CCAATGCGGTGAGTTGTCTAAT 58.990 45.455 0.00 0.00 0.00 1.73
4653 5546 2.511600 GGCAGCTTATCACCGCGT 60.512 61.111 4.92 0.00 0.00 6.01
4757 5650 4.589374 ACTTCTGTACAACTAGCCTGACTT 59.411 41.667 0.00 0.00 0.00 3.01
4799 5692 9.078990 CCTCTGTATGATATAGTTTACACTGGA 57.921 37.037 0.00 0.00 34.06 3.86
4813 5706 9.569122 AGTTTACACTGGACTAATGTGTTAAAT 57.431 29.630 3.35 0.00 43.53 1.40
4814 5707 9.607285 GTTTACACTGGACTAATGTGTTAAATG 57.393 33.333 3.35 0.00 43.53 2.32
4815 5708 8.911918 TTACACTGGACTAATGTGTTAAATGT 57.088 30.769 3.35 0.00 43.53 2.71
4816 5709 7.202016 ACACTGGACTAATGTGTTAAATGTG 57.798 36.000 0.00 0.00 41.45 3.21
4817 5710 6.206634 ACACTGGACTAATGTGTTAAATGTGG 59.793 38.462 0.00 0.00 41.45 4.17
4818 5711 6.206634 CACTGGACTAATGTGTTAAATGTGGT 59.793 38.462 0.00 0.00 0.00 4.16
4819 5712 7.389330 CACTGGACTAATGTGTTAAATGTGGTA 59.611 37.037 0.00 0.00 0.00 3.25
4820 5713 7.940137 ACTGGACTAATGTGTTAAATGTGGTAA 59.060 33.333 0.00 0.00 0.00 2.85
4821 5714 8.330466 TGGACTAATGTGTTAAATGTGGTAAG 57.670 34.615 0.00 0.00 0.00 2.34
4822 5715 7.940137 TGGACTAATGTGTTAAATGTGGTAAGT 59.060 33.333 0.00 0.00 0.00 2.24
4823 5716 8.448615 GGACTAATGTGTTAAATGTGGTAAGTC 58.551 37.037 0.00 0.00 0.00 3.01
4824 5717 8.911918 ACTAATGTGTTAAATGTGGTAAGTCA 57.088 30.769 0.00 0.00 0.00 3.41
4825 5718 8.780249 ACTAATGTGTTAAATGTGGTAAGTCAC 58.220 33.333 0.00 0.00 38.09 3.67
4826 5719 7.817418 AATGTGTTAAATGTGGTAAGTCACT 57.183 32.000 0.00 0.00 38.40 3.41
4827 5720 7.817418 ATGTGTTAAATGTGGTAAGTCACTT 57.183 32.000 0.00 0.00 38.40 3.16
4828 5721 7.633193 TGTGTTAAATGTGGTAAGTCACTTT 57.367 32.000 0.00 0.00 38.40 2.66
4829 5722 7.476667 TGTGTTAAATGTGGTAAGTCACTTTG 58.523 34.615 0.00 0.00 38.40 2.77
4830 5723 7.337184 TGTGTTAAATGTGGTAAGTCACTTTGA 59.663 33.333 0.00 0.00 38.40 2.69
4831 5724 7.855904 GTGTTAAATGTGGTAAGTCACTTTGAG 59.144 37.037 0.00 0.00 38.40 3.02
4832 5725 5.438761 AAATGTGGTAAGTCACTTTGAGC 57.561 39.130 0.00 0.00 38.40 4.26
4833 5726 3.838244 TGTGGTAAGTCACTTTGAGCT 57.162 42.857 0.00 0.00 38.40 4.09
4838 5731 3.251004 GGTAAGTCACTTTGAGCTTGTGG 59.749 47.826 0.00 0.00 33.04 4.17
4858 5751 5.189736 TGTGGTAGGTATTGCTTCTCATTCT 59.810 40.000 0.00 0.00 0.00 2.40
4864 5757 6.488715 AGGTATTGCTTCTCATTCTTTCCTT 58.511 36.000 0.00 0.00 0.00 3.36
4876 5769 7.234782 TCTCATTCTTTCCTTTGTGTACCTCTA 59.765 37.037 0.00 0.00 0.00 2.43
4891 5784 7.397476 TGTGTACCTCTATCCATCTATTCATCC 59.603 40.741 0.00 0.00 0.00 3.51
4903 5796 7.785985 TCCATCTATTCATCCATTCCATGTTTT 59.214 33.333 0.00 0.00 0.00 2.43
4915 5808 9.482627 TCCATTCCATGTTTTTACAATTGTAAC 57.517 29.630 26.72 19.72 39.92 2.50
4959 5852 8.695456 TGTACATTTTGATGAGCAGTCTCTATA 58.305 33.333 0.00 0.00 40.03 1.31
4965 5858 4.776308 TGATGAGCAGTCTCTATATGCCAT 59.224 41.667 0.00 0.00 40.89 4.40
4968 5861 6.670695 TGAGCAGTCTCTATATGCCATTTA 57.329 37.500 0.00 0.00 40.89 1.40
4969 5862 7.066307 TGAGCAGTCTCTATATGCCATTTAA 57.934 36.000 0.00 0.00 40.89 1.52
4970 5863 7.508687 TGAGCAGTCTCTATATGCCATTTAAA 58.491 34.615 0.00 0.00 40.89 1.52
4971 5864 7.992608 TGAGCAGTCTCTATATGCCATTTAAAA 59.007 33.333 0.00 0.00 40.89 1.52
4972 5865 8.752005 AGCAGTCTCTATATGCCATTTAAAAA 57.248 30.769 0.00 0.00 40.89 1.94
5042 5935 3.006940 GGTTCTGTGTTGTGTTGTCAGA 58.993 45.455 0.00 0.00 34.08 3.27
5054 5947 7.389330 TGTTGTGTTGTCAGAAAGTTCTTCTAA 59.611 33.333 0.00 0.00 34.74 2.10
5060 5953 8.831550 GTTGTCAGAAAGTTCTTCTAAATCAGT 58.168 33.333 0.00 0.00 34.74 3.41
5091 5984 9.562408 TTCAACTACATTAATAGTGTTGGTTCA 57.438 29.630 18.23 5.14 35.53 3.18
5248 6141 4.275196 TCTCCTCGTAGGTAATGACATTCG 59.725 45.833 3.36 1.95 36.53 3.34
5255 6148 2.026262 AGGTAATGACATTCGGCCTTGT 60.026 45.455 3.36 1.21 0.00 3.16
5267 6160 3.078837 TCGGCCTTGTAAATCTTCCAAC 58.921 45.455 0.00 0.00 0.00 3.77
5268 6161 2.817258 CGGCCTTGTAAATCTTCCAACA 59.183 45.455 0.00 0.00 0.00 3.33
5272 6165 4.762251 GCCTTGTAAATCTTCCAACAGAGT 59.238 41.667 0.00 0.00 0.00 3.24
5274 6167 6.239036 GCCTTGTAAATCTTCCAACAGAGTTT 60.239 38.462 0.00 0.00 33.30 2.66
5280 6173 7.929941 AAATCTTCCAACAGAGTTTATCTCC 57.070 36.000 0.00 0.00 43.71 3.71
5288 6181 6.486657 CCAACAGAGTTTATCTCCTTGTTCAA 59.513 38.462 0.00 0.00 43.71 2.69
5300 6193 5.068987 TCTCCTTGTTCAACTTCCAAAATGG 59.931 40.000 0.00 0.00 39.43 3.16
5302 6195 5.049828 CCTTGTTCAACTTCCAAAATGGTC 58.950 41.667 0.00 0.00 39.03 4.02
5311 6204 3.893753 TCCAAAATGGTCTTCCTGGAA 57.106 42.857 9.14 9.14 39.03 3.53
5313 6206 4.750941 TCCAAAATGGTCTTCCTGGAATT 58.249 39.130 10.03 0.00 39.03 2.17
5316 6209 6.784969 TCCAAAATGGTCTTCCTGGAATTTTA 59.215 34.615 10.03 0.00 39.03 1.52
5421 6314 0.603707 TCCAAGAAAGGTGAGCGCAG 60.604 55.000 11.47 0.00 0.00 5.18
5578 6489 2.460918 CTAGAAGGTATGCGACGGTTG 58.539 52.381 0.00 0.00 0.00 3.77
5606 6543 8.256611 TCACATCTTGAAACTGAATTACTAGC 57.743 34.615 0.00 0.00 0.00 3.42
5607 6544 8.097038 TCACATCTTGAAACTGAATTACTAGCT 58.903 33.333 0.00 0.00 0.00 3.32
5608 6545 8.725148 CACATCTTGAAACTGAATTACTAGCTT 58.275 33.333 0.00 0.00 0.00 3.74
5609 6546 9.944376 ACATCTTGAAACTGAATTACTAGCTTA 57.056 29.630 0.00 0.00 0.00 3.09
5687 6624 9.915629 ATATTTGTAAAACTAAAACGAATGGCA 57.084 25.926 0.00 0.00 31.33 4.92
5688 6625 8.825667 ATTTGTAAAACTAAAACGAATGGCAT 57.174 26.923 0.00 0.00 0.00 4.40
5689 6626 7.630470 TTGTAAAACTAAAACGAATGGCATG 57.370 32.000 0.00 0.00 0.00 4.06
5899 6841 1.663074 GTGATCGATCTGAGGCCGC 60.663 63.158 25.02 0.00 0.00 6.53
5968 6910 9.062524 GTACTCACAAGAGATAGACTGTATGAT 57.937 37.037 0.00 0.00 44.98 2.45
5976 6918 8.938801 AGAGATAGACTGTATGATGATGACTT 57.061 34.615 0.00 0.00 0.00 3.01
6075 7020 9.823647 TCTGGATATTATTCTGTTTTCACTCTC 57.176 33.333 0.00 0.00 0.00 3.20
6113 7058 6.108687 TGAGCTGTTTACTAGTTGATGGATG 58.891 40.000 0.00 0.00 0.00 3.51
6114 7059 6.054860 AGCTGTTTACTAGTTGATGGATGT 57.945 37.500 0.00 0.00 0.00 3.06
6127 7072 2.503375 GATGTGCTTGTGCTGCGC 60.503 61.111 6.19 6.19 40.48 6.09
6143 7088 0.785979 GCGCTGCTTTGTCAAATTGG 59.214 50.000 0.00 0.00 0.00 3.16
6151 7098 6.403527 GCTGCTTTGTCAAATTGGTTTCTTTT 60.404 34.615 0.00 0.00 0.00 2.27
6154 7101 8.663911 TGCTTTGTCAAATTGGTTTCTTTTAAG 58.336 29.630 0.00 0.00 0.00 1.85
6164 7111 4.039703 GGTTTCTTTTAAGTGTCGGTTGC 58.960 43.478 0.00 0.00 0.00 4.17
6199 7151 6.993786 TTTGAACGTGCTTGGATGAATATA 57.006 33.333 0.00 0.00 0.00 0.86
6225 7177 2.329379 CTTTGGCACGTCTGTCTCTAC 58.671 52.381 0.00 0.00 0.00 2.59
6254 7206 2.197324 GGTTTGGTGCCTGACCCA 59.803 61.111 0.00 0.00 45.45 4.51
6273 7225 0.905357 AGGTATCCGGCTGGCATATC 59.095 55.000 6.73 6.45 34.14 1.63
6274 7226 0.905357 GGTATCCGGCTGGCATATCT 59.095 55.000 6.73 0.00 34.14 1.98
6275 7227 1.406069 GGTATCCGGCTGGCATATCTG 60.406 57.143 6.73 0.00 34.14 2.90
6276 7228 1.276421 GTATCCGGCTGGCATATCTGT 59.724 52.381 6.73 0.00 34.14 3.41
6277 7229 0.767375 ATCCGGCTGGCATATCTGTT 59.233 50.000 6.73 0.00 34.14 3.16
6278 7230 1.419381 TCCGGCTGGCATATCTGTTA 58.581 50.000 6.73 0.00 34.14 2.41
6279 7231 1.977854 TCCGGCTGGCATATCTGTTAT 59.022 47.619 6.73 0.00 34.14 1.89
6280 7232 3.169908 TCCGGCTGGCATATCTGTTATA 58.830 45.455 6.73 0.00 34.14 0.98
6281 7233 3.195610 TCCGGCTGGCATATCTGTTATAG 59.804 47.826 6.73 0.00 34.14 1.31
6282 7234 3.055819 CCGGCTGGCATATCTGTTATAGT 60.056 47.826 0.00 0.00 0.00 2.12
6283 7235 4.159693 CCGGCTGGCATATCTGTTATAGTA 59.840 45.833 0.00 0.00 0.00 1.82
6284 7236 5.163405 CCGGCTGGCATATCTGTTATAGTAT 60.163 44.000 0.00 0.00 0.00 2.12
6285 7237 6.040504 CCGGCTGGCATATCTGTTATAGTATA 59.959 42.308 0.00 0.00 0.00 1.47
6286 7238 7.255977 CCGGCTGGCATATCTGTTATAGTATAT 60.256 40.741 0.00 0.00 0.00 0.86
6287 7239 8.793592 CGGCTGGCATATCTGTTATAGTATATA 58.206 37.037 1.08 0.00 0.00 0.86
6314 7266 1.533129 GCGTGTTTGGTTTCCTGTGTC 60.533 52.381 0.00 0.00 0.00 3.67
6348 7300 1.516821 CCGCCATGCAAAATCCACG 60.517 57.895 0.00 0.00 0.00 4.94
6361 7313 1.314730 ATCCACGTTGTTTGGTGTCC 58.685 50.000 0.00 0.00 35.42 4.02
6378 7330 2.650116 CCTGTGCGGCCTACTCAGT 61.650 63.158 18.03 0.00 0.00 3.41
6440 7392 1.814169 GGGAACGCAGGAATCGGTC 60.814 63.158 0.00 0.00 42.44 4.79
6488 7440 2.027625 CCGCAACTCCCGTGTCTTC 61.028 63.158 0.00 0.00 0.00 2.87
6509 7461 7.010160 TCTTCTTTTCCTCTTTCTCTCTCTCT 58.990 38.462 0.00 0.00 0.00 3.10
6510 7462 6.834168 TCTTTTCCTCTTTCTCTCTCTCTC 57.166 41.667 0.00 0.00 0.00 3.20
6528 7480 1.139734 CACCCGTCAGACTGGATCG 59.860 63.158 17.45 5.74 0.00 3.69
6529 7481 2.052690 ACCCGTCAGACTGGATCGG 61.053 63.158 17.45 19.80 40.72 4.18
6569 7536 1.979308 CATCTGAGCTCCCTCATCCAT 59.021 52.381 12.15 0.00 46.44 3.41
6610 7602 3.717294 GTGCCCCTCCACGTCCAT 61.717 66.667 0.00 0.00 0.00 3.41
6611 7603 3.716195 TGCCCCTCCACGTCCATG 61.716 66.667 0.00 0.00 0.00 3.66
6613 7605 4.489771 CCCCTCCACGTCCATGCC 62.490 72.222 0.00 0.00 0.00 4.40
6614 7606 4.838152 CCCTCCACGTCCATGCCG 62.838 72.222 0.00 1.94 0.00 5.69
6615 7607 4.838152 CCTCCACGTCCATGCCGG 62.838 72.222 0.00 0.00 0.00 6.13
6616 7608 4.838152 CTCCACGTCCATGCCGGG 62.838 72.222 2.18 3.52 34.36 5.73
6618 7610 4.838152 CCACGTCCATGCCGGGAG 62.838 72.222 2.18 0.00 37.71 4.30
6621 7613 4.899239 CGTCCATGCCGGGAGCTC 62.899 72.222 4.71 4.71 44.23 4.09
6622 7614 4.899239 GTCCATGCCGGGAGCTCG 62.899 72.222 7.83 0.00 44.23 5.03
6640 7632 4.899239 CTGCCCCGCCTCGACATC 62.899 72.222 0.00 0.00 0.00 3.06
6643 7635 4.570663 CCCCGCCTCGACATCGTC 62.571 72.222 0.54 0.00 40.80 4.20
6644 7636 3.822192 CCCGCCTCGACATCGTCA 61.822 66.667 0.54 0.00 40.80 4.35
6645 7637 2.278206 CCGCCTCGACATCGTCAG 60.278 66.667 0.54 0.00 40.80 3.51
6646 7638 2.278206 CGCCTCGACATCGTCAGG 60.278 66.667 0.54 3.08 40.80 3.86
6647 7639 2.885861 GCCTCGACATCGTCAGGT 59.114 61.111 9.89 0.00 40.80 4.00
6648 7640 1.215647 GCCTCGACATCGTCAGGTT 59.784 57.895 9.89 0.00 40.80 3.50
6649 7641 0.802607 GCCTCGACATCGTCAGGTTC 60.803 60.000 9.89 0.00 40.80 3.62
6650 7642 0.179134 CCTCGACATCGTCAGGTTCC 60.179 60.000 0.54 0.00 40.80 3.62
6651 7643 0.526211 CTCGACATCGTCAGGTTCCA 59.474 55.000 0.54 0.00 40.80 3.53
6652 7644 0.242825 TCGACATCGTCAGGTTCCAC 59.757 55.000 0.54 0.00 40.80 4.02
6653 7645 0.038618 CGACATCGTCAGGTTCCACA 60.039 55.000 0.00 0.00 32.09 4.17
6654 7646 1.714794 GACATCGTCAGGTTCCACAG 58.285 55.000 0.00 0.00 32.09 3.66
6655 7647 0.321671 ACATCGTCAGGTTCCACAGG 59.678 55.000 0.00 0.00 0.00 4.00
6656 7648 1.021390 CATCGTCAGGTTCCACAGGC 61.021 60.000 0.00 0.00 0.00 4.85
6657 7649 2.507110 ATCGTCAGGTTCCACAGGCG 62.507 60.000 0.00 0.00 0.00 5.52
6658 7650 2.426023 GTCAGGTTCCACAGGCGT 59.574 61.111 0.00 0.00 0.00 5.68
6659 7651 1.668151 GTCAGGTTCCACAGGCGTC 60.668 63.158 0.00 0.00 0.00 5.19
6660 7652 1.837051 TCAGGTTCCACAGGCGTCT 60.837 57.895 0.00 0.00 0.00 4.18
6661 7653 1.374758 CAGGTTCCACAGGCGTCTC 60.375 63.158 0.00 0.00 0.00 3.36
6662 7654 1.534235 AGGTTCCACAGGCGTCTCT 60.534 57.895 0.00 0.00 0.00 3.10
6663 7655 1.122019 AGGTTCCACAGGCGTCTCTT 61.122 55.000 0.00 0.00 0.00 2.85
6664 7656 0.670854 GGTTCCACAGGCGTCTCTTC 60.671 60.000 0.00 0.00 0.00 2.87
6665 7657 0.670854 GTTCCACAGGCGTCTCTTCC 60.671 60.000 0.00 0.00 0.00 3.46
6666 7658 1.118965 TTCCACAGGCGTCTCTTCCA 61.119 55.000 0.00 0.00 0.00 3.53
6667 7659 1.374758 CCACAGGCGTCTCTTCCAC 60.375 63.158 0.00 0.00 0.00 4.02
6668 7660 1.367471 CACAGGCGTCTCTTCCACA 59.633 57.895 0.00 0.00 0.00 4.17
6669 7661 0.946221 CACAGGCGTCTCTTCCACAC 60.946 60.000 0.00 0.00 0.00 3.82
6670 7662 1.374758 CAGGCGTCTCTTCCACACC 60.375 63.158 0.00 0.00 0.00 4.16
6671 7663 1.837051 AGGCGTCTCTTCCACACCA 60.837 57.895 0.00 0.00 0.00 4.17
6672 7664 1.374758 GGCGTCTCTTCCACACCAG 60.375 63.158 0.00 0.00 0.00 4.00
6673 7665 1.367840 GCGTCTCTTCCACACCAGT 59.632 57.895 0.00 0.00 0.00 4.00
6674 7666 0.667792 GCGTCTCTTCCACACCAGTC 60.668 60.000 0.00 0.00 0.00 3.51
6675 7667 0.038159 CGTCTCTTCCACACCAGTCC 60.038 60.000 0.00 0.00 0.00 3.85
6676 7668 0.038159 GTCTCTTCCACACCAGTCCG 60.038 60.000 0.00 0.00 0.00 4.79
6677 7669 0.178973 TCTCTTCCACACCAGTCCGA 60.179 55.000 0.00 0.00 0.00 4.55
6678 7670 0.244994 CTCTTCCACACCAGTCCGAG 59.755 60.000 0.00 0.00 0.00 4.63
6679 7671 1.374758 CTTCCACACCAGTCCGAGC 60.375 63.158 0.00 0.00 0.00 5.03
6680 7672 1.821061 CTTCCACACCAGTCCGAGCT 61.821 60.000 0.00 0.00 0.00 4.09
6681 7673 1.816863 TTCCACACCAGTCCGAGCTC 61.817 60.000 2.73 2.73 0.00 4.09
6682 7674 2.262915 CACACCAGTCCGAGCTCC 59.737 66.667 8.47 0.00 0.00 4.70
6683 7675 2.997897 ACACCAGTCCGAGCTCCC 60.998 66.667 8.47 0.00 0.00 4.30
6684 7676 2.681778 CACCAGTCCGAGCTCCCT 60.682 66.667 8.47 0.00 0.00 4.20
6685 7677 2.363147 ACCAGTCCGAGCTCCCTC 60.363 66.667 8.47 0.00 34.66 4.30
6693 7685 4.500116 GAGCTCCCTCGACGGTGC 62.500 72.222 16.63 16.63 41.71 5.01
6695 7687 4.500116 GCTCCCTCGACGGTGCTC 62.500 72.222 16.96 0.00 38.97 4.26
6696 7688 3.827898 CTCCCTCGACGGTGCTCC 61.828 72.222 0.15 0.00 0.00 4.70
6697 7689 4.361971 TCCCTCGACGGTGCTCCT 62.362 66.667 2.85 0.00 0.00 3.69
6698 7690 3.827898 CCCTCGACGGTGCTCCTC 61.828 72.222 2.85 0.00 0.00 3.71
6699 7691 3.827898 CCTCGACGGTGCTCCTCC 61.828 72.222 2.85 0.00 0.00 4.30
6700 7692 3.062466 CTCGACGGTGCTCCTCCA 61.062 66.667 2.85 0.00 0.00 3.86
6701 7693 3.343788 CTCGACGGTGCTCCTCCAC 62.344 68.421 2.85 0.00 35.00 4.02
6702 7694 3.680786 CGACGGTGCTCCTCCACA 61.681 66.667 2.85 0.00 37.46 4.17
6703 7695 2.048127 GACGGTGCTCCTCCACAC 60.048 66.667 2.85 0.00 37.46 3.82
6707 7699 2.032681 GTGCTCCTCCACACCCAC 59.967 66.667 0.00 0.00 35.80 4.61
6708 7700 3.625897 TGCTCCTCCACACCCACG 61.626 66.667 0.00 0.00 0.00 4.94
6709 7701 4.394712 GCTCCTCCACACCCACGG 62.395 72.222 0.00 0.00 0.00 4.94
6710 7702 2.603473 CTCCTCCACACCCACGGA 60.603 66.667 0.00 0.00 0.00 4.69
6741 7850 3.307906 CCGACCACCAACCGAGGA 61.308 66.667 0.00 0.00 0.00 3.71
6742 7851 2.738480 CGACCACCAACCGAGGAA 59.262 61.111 0.00 0.00 0.00 3.36
6743 7852 1.374252 CGACCACCAACCGAGGAAG 60.374 63.158 0.00 0.00 0.00 3.46
6745 7854 0.395312 GACCACCAACCGAGGAAGAA 59.605 55.000 0.00 0.00 0.00 2.52
6759 7871 3.254035 AAGAAGGGGCGAGGGGAGA 62.254 63.158 0.00 0.00 0.00 3.71
6857 7969 8.895932 ATAAAATTGAAACGTGAGATTGCTAC 57.104 30.769 0.00 0.00 0.00 3.58
6956 8068 6.494491 TCAGGTCCAGATTGATGAAAATGTTT 59.506 34.615 0.00 0.00 0.00 2.83
7053 8165 6.480524 TTTACATGTTCTCTTTGTCCATCG 57.519 37.500 2.30 0.00 0.00 3.84
7087 8199 6.872020 AGATCCAGTTGAAATGCTTGAAATTG 59.128 34.615 0.00 0.00 0.00 2.32
7089 8201 5.058490 CCAGTTGAAATGCTTGAAATTGGT 58.942 37.500 0.00 0.00 0.00 3.67
7094 8206 4.217334 TGAAATGCTTGAAATTGGTAGCGA 59.783 37.500 0.00 0.00 36.43 4.93
7123 8235 8.480501 AGTTAATTGGATTAAGCTCAAATGCAT 58.519 29.630 14.11 0.00 35.07 3.96
7124 8236 8.545420 GTTAATTGGATTAAGCTCAAATGCATG 58.455 33.333 14.11 0.00 35.07 4.06
7125 8237 4.049546 TGGATTAAGCTCAAATGCATGC 57.950 40.909 11.82 11.82 30.82 4.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 3.760151 TCAATGCATGTCTGAGAAAAGGG 59.240 43.478 0.00 0.00 0.00 3.95
37 38 3.302555 CAACACACTGTCAATGCATGTC 58.697 45.455 0.00 0.00 0.00 3.06
41 42 1.065851 CAGCAACACACTGTCAATGCA 59.934 47.619 11.12 0.00 34.91 3.96
46 47 3.081061 ACTTTTCAGCAACACACTGTCA 58.919 40.909 0.00 0.00 36.50 3.58
47 48 3.764885 ACTTTTCAGCAACACACTGTC 57.235 42.857 0.00 0.00 36.50 3.51
48 49 4.142469 GGTAACTTTTCAGCAACACACTGT 60.142 41.667 0.00 0.00 36.50 3.55
49 50 4.351192 GGTAACTTTTCAGCAACACACTG 58.649 43.478 0.00 0.00 36.44 3.66
50 51 3.380320 GGGTAACTTTTCAGCAACACACT 59.620 43.478 0.00 0.00 0.00 3.55
51 52 3.129638 TGGGTAACTTTTCAGCAACACAC 59.870 43.478 0.00 0.00 0.00 3.82
53 54 4.037446 TGATGGGTAACTTTTCAGCAACAC 59.963 41.667 0.00 0.00 0.00 3.32
54 55 4.211125 TGATGGGTAACTTTTCAGCAACA 58.789 39.130 0.00 0.00 0.00 3.33
55 56 4.846779 TGATGGGTAACTTTTCAGCAAC 57.153 40.909 0.00 0.00 0.00 4.17
56 57 7.232534 ACTTTATGATGGGTAACTTTTCAGCAA 59.767 33.333 0.00 0.00 0.00 3.91
57 58 6.719370 ACTTTATGATGGGTAACTTTTCAGCA 59.281 34.615 0.00 0.00 0.00 4.41
58 59 7.158099 ACTTTATGATGGGTAACTTTTCAGC 57.842 36.000 0.00 0.00 0.00 4.26
59 60 7.119262 ACGACTTTATGATGGGTAACTTTTCAG 59.881 37.037 0.00 0.00 0.00 3.02
60 61 6.938030 ACGACTTTATGATGGGTAACTTTTCA 59.062 34.615 0.00 0.00 0.00 2.69
61 62 7.373778 ACGACTTTATGATGGGTAACTTTTC 57.626 36.000 0.00 0.00 0.00 2.29
165 324 3.031736 ACGTTGGTATGCCTACTCAGAT 58.968 45.455 12.08 0.00 38.17 2.90
168 327 2.691526 CCTACGTTGGTATGCCTACTCA 59.308 50.000 12.08 0.00 38.17 3.41
235 411 3.394674 TTCACACGCTTCTATTGGTGA 57.605 42.857 0.00 0.00 34.59 4.02
236 412 4.685169 ATTTCACACGCTTCTATTGGTG 57.315 40.909 0.00 0.00 36.50 4.17
241 417 4.827692 TGTGGTATTTCACACGCTTCTAT 58.172 39.130 0.00 0.00 42.05 1.98
248 424 3.921677 AGGTACTGTGGTATTTCACACG 58.078 45.455 0.00 0.00 42.05 4.49
391 567 1.227263 ATATCGTGTGGCTGACGGC 60.227 57.895 0.00 0.00 37.43 5.68
392 568 0.179111 ACATATCGTGTGGCTGACGG 60.179 55.000 8.62 0.00 40.28 4.79
393 569 2.032924 TCTACATATCGTGTGGCTGACG 59.967 50.000 2.93 2.93 42.24 4.35
394 570 3.315470 TCTCTACATATCGTGTGGCTGAC 59.685 47.826 0.00 0.00 42.24 3.51
395 571 3.551846 TCTCTACATATCGTGTGGCTGA 58.448 45.455 0.00 0.00 42.24 4.26
396 572 3.990318 TCTCTACATATCGTGTGGCTG 57.010 47.619 0.00 0.00 42.24 4.85
397 573 3.319405 CCTTCTCTACATATCGTGTGGCT 59.681 47.826 0.00 0.00 42.24 4.75
398 574 3.318275 TCCTTCTCTACATATCGTGTGGC 59.682 47.826 0.00 0.00 42.24 5.01
399 575 5.508153 CCTTCCTTCTCTACATATCGTGTGG 60.508 48.000 0.00 0.00 42.24 4.17
400 576 5.508153 CCCTTCCTTCTCTACATATCGTGTG 60.508 48.000 0.00 0.00 42.24 3.82
441 639 3.243359 TCCCAGAAGGAACAAGCAAAT 57.757 42.857 0.00 0.00 43.78 2.32
468 666 1.591158 CCACCATTATGTACGCACGTC 59.409 52.381 0.00 0.00 0.00 4.34
469 667 1.647346 CCACCATTATGTACGCACGT 58.353 50.000 0.00 0.00 0.00 4.49
470 668 0.303493 GCCACCATTATGTACGCACG 59.697 55.000 0.00 0.00 0.00 5.34
471 669 1.063469 GTGCCACCATTATGTACGCAC 59.937 52.381 10.44 10.44 36.88 5.34
504 862 7.311364 TCTTCAAATATTTACAACGCTACCC 57.689 36.000 0.00 0.00 0.00 3.69
645 1004 4.398358 GCACAGTTATTTAGGGGAAACTCC 59.602 45.833 0.00 0.00 35.23 3.85
646 1005 5.123979 CAGCACAGTTATTTAGGGGAAACTC 59.876 44.000 0.00 0.00 29.93 3.01
647 1006 5.010282 CAGCACAGTTATTTAGGGGAAACT 58.990 41.667 0.00 0.00 32.52 2.66
648 1007 4.157840 CCAGCACAGTTATTTAGGGGAAAC 59.842 45.833 0.00 0.00 0.00 2.78
649 1008 4.202631 ACCAGCACAGTTATTTAGGGGAAA 60.203 41.667 0.00 0.00 0.00 3.13
650 1009 3.332485 ACCAGCACAGTTATTTAGGGGAA 59.668 43.478 0.00 0.00 0.00 3.97
651 1010 2.916934 ACCAGCACAGTTATTTAGGGGA 59.083 45.455 0.00 0.00 0.00 4.81
652 1011 3.366052 ACCAGCACAGTTATTTAGGGG 57.634 47.619 0.00 0.00 0.00 4.79
653 1012 8.567948 CATATTTACCAGCACAGTTATTTAGGG 58.432 37.037 0.00 0.00 0.00 3.53
654 1013 8.076178 GCATATTTACCAGCACAGTTATTTAGG 58.924 37.037 0.00 0.00 0.00 2.69
655 1014 8.076178 GGCATATTTACCAGCACAGTTATTTAG 58.924 37.037 0.00 0.00 0.00 1.85
656 1015 7.558081 TGGCATATTTACCAGCACAGTTATTTA 59.442 33.333 0.00 0.00 0.00 1.40
657 1016 6.379703 TGGCATATTTACCAGCACAGTTATTT 59.620 34.615 0.00 0.00 0.00 1.40
658 1017 5.890985 TGGCATATTTACCAGCACAGTTATT 59.109 36.000 0.00 0.00 0.00 1.40
659 1018 5.445069 TGGCATATTTACCAGCACAGTTAT 58.555 37.500 0.00 0.00 0.00 1.89
660 1019 4.849518 TGGCATATTTACCAGCACAGTTA 58.150 39.130 0.00 0.00 0.00 2.24
661 1020 3.696045 TGGCATATTTACCAGCACAGTT 58.304 40.909 0.00 0.00 0.00 3.16
662 1021 3.364460 TGGCATATTTACCAGCACAGT 57.636 42.857 0.00 0.00 0.00 3.55
663 1022 3.551454 GCATGGCATATTTACCAGCACAG 60.551 47.826 0.00 0.00 39.88 3.66
664 1023 2.361757 GCATGGCATATTTACCAGCACA 59.638 45.455 0.00 0.00 39.88 4.57
700 1059 1.838568 AAAAAGACCGCGGCGACTTC 61.839 55.000 28.58 15.49 0.00 3.01
701 1060 1.838568 GAAAAAGACCGCGGCGACTT 61.839 55.000 28.58 24.08 0.00 3.01
702 1061 2.280592 AAAAAGACCGCGGCGACT 60.281 55.556 28.58 19.47 0.00 4.18
747 1122 1.600916 GGTTGACCACACCAGCCTC 60.601 63.158 0.00 0.00 32.94 4.70
748 1123 1.645402 AAGGTTGACCACACCAGCCT 61.645 55.000 2.56 0.00 45.34 4.58
787 1175 5.717038 AAAATTGAAAACGCCAGTTCAAG 57.283 34.783 8.68 0.00 44.55 3.02
843 1231 9.494271 CTTGCAGAATTTTAGTAGGAGCATATA 57.506 33.333 0.00 0.00 0.00 0.86
844 1232 8.213679 TCTTGCAGAATTTTAGTAGGAGCATAT 58.786 33.333 0.00 0.00 0.00 1.78
845 1233 7.564793 TCTTGCAGAATTTTAGTAGGAGCATA 58.435 34.615 0.00 0.00 0.00 3.14
846 1234 6.418101 TCTTGCAGAATTTTAGTAGGAGCAT 58.582 36.000 0.00 0.00 0.00 3.79
847 1235 5.804639 TCTTGCAGAATTTTAGTAGGAGCA 58.195 37.500 0.00 0.00 0.00 4.26
848 1236 6.743575 TTCTTGCAGAATTTTAGTAGGAGC 57.256 37.500 0.00 0.00 0.00 4.70
876 1264 2.952702 GCAGAGACATACAGGAGGGAGT 60.953 54.545 0.00 0.00 0.00 3.85
885 1273 1.613317 CCCACCCGCAGAGACATACA 61.613 60.000 0.00 0.00 0.00 2.29
886 1274 1.144057 CCCACCCGCAGAGACATAC 59.856 63.158 0.00 0.00 0.00 2.39
887 1275 2.731571 GCCCACCCGCAGAGACATA 61.732 63.158 0.00 0.00 0.00 2.29
888 1276 4.101448 GCCCACCCGCAGAGACAT 62.101 66.667 0.00 0.00 0.00 3.06
957 1383 2.993863 GGATATGGATGGGGTAAAGGGT 59.006 50.000 0.00 0.00 0.00 4.34
1151 1596 1.152546 GAGGAGGAGGAGAGGGAGC 60.153 68.421 0.00 0.00 0.00 4.70
1152 1597 0.859760 ATGAGGAGGAGGAGAGGGAG 59.140 60.000 0.00 0.00 0.00 4.30
1153 1598 0.856982 GATGAGGAGGAGGAGAGGGA 59.143 60.000 0.00 0.00 0.00 4.20
1154 1599 0.178935 GGATGAGGAGGAGGAGAGGG 60.179 65.000 0.00 0.00 0.00 4.30
1155 1600 0.859760 AGGATGAGGAGGAGGAGAGG 59.140 60.000 0.00 0.00 0.00 3.69
1156 1601 1.545428 CGAGGATGAGGAGGAGGAGAG 60.545 61.905 0.00 0.00 0.00 3.20
1309 1764 4.994756 AGCGCCCAAAACCCCAGG 62.995 66.667 2.29 0.00 0.00 4.45
1310 1765 3.373565 GAGCGCCCAAAACCCCAG 61.374 66.667 2.29 0.00 0.00 4.45
1327 1787 0.877213 ACAAACCCGTCGAAACCTCG 60.877 55.000 0.00 0.00 46.87 4.63
1329 1789 1.302366 GAACAAACCCGTCGAAACCT 58.698 50.000 0.00 0.00 0.00 3.50
1331 1791 1.302366 AGGAACAAACCCGTCGAAAC 58.698 50.000 0.00 0.00 0.00 2.78
1334 1794 1.619654 TCTAGGAACAAACCCGTCGA 58.380 50.000 0.00 0.00 0.00 4.20
1335 1795 2.667473 ATCTAGGAACAAACCCGTCG 57.333 50.000 0.00 0.00 0.00 5.12
1336 1796 3.933332 CAGAATCTAGGAACAAACCCGTC 59.067 47.826 0.00 0.00 0.00 4.79
1337 1797 3.581332 TCAGAATCTAGGAACAAACCCGT 59.419 43.478 0.00 0.00 0.00 5.28
1338 1798 4.202245 TCAGAATCTAGGAACAAACCCG 57.798 45.455 0.00 0.00 0.00 5.28
1339 1799 6.625960 GCAATTCAGAATCTAGGAACAAACCC 60.626 42.308 0.00 0.00 0.00 4.11
1342 1802 7.596494 CAAGCAATTCAGAATCTAGGAACAAA 58.404 34.615 0.00 0.00 0.00 2.83
1349 1809 4.206698 CGGCAAGCAATTCAGAATCTAG 57.793 45.455 0.00 0.00 0.00 2.43
1440 1900 0.613777 AAGGGAACAGGCCTAACGAG 59.386 55.000 3.98 0.00 0.00 4.18
1442 1902 1.305930 GCAAGGGAACAGGCCTAACG 61.306 60.000 3.98 0.00 0.00 3.18
1446 1906 1.002857 ATAAGCAAGGGAACAGGCCT 58.997 50.000 0.00 0.00 32.72 5.19
1447 1907 1.393603 GATAAGCAAGGGAACAGGCC 58.606 55.000 0.00 0.00 32.72 5.19
1448 1908 1.340991 TGGATAAGCAAGGGAACAGGC 60.341 52.381 0.00 0.00 0.00 4.85
1454 1919 2.375174 ACAGTGTTGGATAAGCAAGGGA 59.625 45.455 0.00 0.00 0.00 4.20
1458 1923 2.293122 GCACACAGTGTTGGATAAGCAA 59.707 45.455 2.45 0.00 35.75 3.91
1464 1929 1.985473 ACATGCACACAGTGTTGGAT 58.015 45.000 2.45 4.01 35.75 3.41
1479 1949 1.139163 GGCAAGCCGTTCAAAACATG 58.861 50.000 0.00 0.00 0.00 3.21
1486 1956 0.749818 TTGTTCAGGCAAGCCGTTCA 60.750 50.000 5.28 1.75 41.95 3.18
1510 1980 2.509336 CCGCAAGCCACTACTCCG 60.509 66.667 0.00 0.00 0.00 4.63
1522 2004 4.269523 ACAAGAGCAGGCCCGCAA 62.270 61.111 14.75 0.00 0.00 4.85
1529 2011 1.790387 GTAAGCGCACAAGAGCAGG 59.210 57.895 11.47 0.00 43.61 4.85
1556 2038 2.002586 GCATTGTACAGATGCGAGTGT 58.997 47.619 19.88 0.00 40.30 3.55
1740 2267 7.007697 CCGCTTCTTAAAAATCGGTTATATCG 58.992 38.462 0.00 0.00 32.93 2.92
1827 2354 1.888215 AACATGCAGGACAGACACAG 58.112 50.000 4.84 0.00 0.00 3.66
1833 2372 9.590451 AAAATAATAATGAAACATGCAGGACAG 57.410 29.630 4.84 0.00 0.00 3.51
1904 2447 6.658816 ACAATGGATAGCACAAAACTGTATCA 59.341 34.615 0.00 0.00 0.00 2.15
2069 2617 8.834465 AGTAGCAGATGTAAGATTTAAATGCTG 58.166 33.333 5.17 3.28 41.27 4.41
2081 2629 3.742640 GCCAAGGGAGTAGCAGATGTAAG 60.743 52.174 0.00 0.00 0.00 2.34
2125 2678 3.071580 GCTTGGTAGCACTAGCAGG 57.928 57.895 12.58 12.96 46.95 4.85
2188 2741 6.364706 TGCATAAAAATACAAAGCCAAACTCG 59.635 34.615 0.00 0.00 0.00 4.18
2254 2811 2.109181 GATAGACGGGTGCAGGGC 59.891 66.667 0.00 0.00 0.00 5.19
2264 2821 8.370493 ACAGATATGTTTCAAATGGATAGACG 57.630 34.615 0.00 0.00 0.00 4.18
2293 2853 5.104900 GGTATTGAACTGGTCCTATGACTGT 60.105 44.000 0.00 0.00 41.47 3.55
2294 2854 5.129485 AGGTATTGAACTGGTCCTATGACTG 59.871 44.000 0.00 0.00 41.47 3.51
2302 2862 4.828072 AGAAGAGGTATTGAACTGGTCC 57.172 45.455 0.00 0.00 0.00 4.46
2325 2885 4.648762 AGATCTGGTTCATCTAGGACTGTG 59.351 45.833 0.00 0.00 0.00 3.66
2327 2887 5.867903 AAGATCTGGTTCATCTAGGACTG 57.132 43.478 0.00 0.00 29.97 3.51
2331 2891 6.322456 TGTCAGTAAGATCTGGTTCATCTAGG 59.678 42.308 0.00 0.00 36.25 3.02
2355 2915 4.751600 GGCAAAAAGAAGAAGGAATTGGTG 59.248 41.667 0.00 0.00 0.00 4.17
2376 2936 4.857037 CGTTAAAGCAATGGTTTAGAAGGC 59.143 41.667 15.77 6.60 36.94 4.35
2381 2941 5.753744 TGACACGTTAAAGCAATGGTTTAG 58.246 37.500 15.77 9.42 36.94 1.85
2399 2959 3.624326 TTACAGCAGCAACAATGACAC 57.376 42.857 0.00 0.00 0.00 3.67
2466 3027 4.989797 CCATGTTTAGTCAATGCAGCAAAA 59.010 37.500 0.00 0.00 0.00 2.44
2467 3028 4.039004 ACCATGTTTAGTCAATGCAGCAAA 59.961 37.500 0.00 0.00 0.00 3.68
2479 3040 3.320826 GCCACCAAAGAACCATGTTTAGT 59.679 43.478 0.00 0.00 0.00 2.24
2544 3107 5.424895 AGCAGGGCCATAAATAAATGTTTCA 59.575 36.000 6.18 0.00 0.00 2.69
2559 3122 1.123077 CTGTGTAGATAGCAGGGCCA 58.877 55.000 6.18 0.00 0.00 5.36
2563 3126 3.449018 AGGTGAACTGTGTAGATAGCAGG 59.551 47.826 0.00 0.00 34.79 4.85
2730 3293 1.297378 CATCAATGCAGTGCGAGCG 60.297 57.895 9.79 0.00 33.85 5.03
2847 3412 2.494870 ACCGTATAGGCATCGTAATCCC 59.505 50.000 0.00 0.00 46.52 3.85
2849 3414 2.921754 GCACCGTATAGGCATCGTAATC 59.078 50.000 0.00 0.00 46.52 1.75
2850 3415 2.353406 GGCACCGTATAGGCATCGTAAT 60.353 50.000 0.00 0.00 46.52 1.89
2851 3416 1.000060 GGCACCGTATAGGCATCGTAA 60.000 52.381 0.00 0.00 46.52 3.18
2852 3417 0.599558 GGCACCGTATAGGCATCGTA 59.400 55.000 0.00 0.00 46.52 3.43
2853 3418 1.366366 GGCACCGTATAGGCATCGT 59.634 57.895 0.00 0.00 46.52 3.73
2854 3419 1.374252 GGGCACCGTATAGGCATCG 60.374 63.158 0.00 0.00 46.52 3.84
2855 3420 4.695560 GGGCACCGTATAGGCATC 57.304 61.111 0.00 0.00 46.52 3.91
2917 3487 0.537371 ACCAAGGCACCAACAGTAGC 60.537 55.000 0.00 0.00 0.00 3.58
2950 3520 1.014352 ACCAGCGACAGAAACAACAC 58.986 50.000 0.00 0.00 0.00 3.32
2964 3534 6.406692 TTCTCACTATATCCAAGTACCAGC 57.593 41.667 0.00 0.00 0.00 4.85
2971 3541 8.715998 GCACAATACATTCTCACTATATCCAAG 58.284 37.037 0.00 0.00 0.00 3.61
2974 3544 8.310382 AGAGCACAATACATTCTCACTATATCC 58.690 37.037 0.00 0.00 0.00 2.59
3026 3596 4.984161 CCTGAAACAAGTAGCACCAATTTG 59.016 41.667 0.00 0.00 0.00 2.32
3027 3597 4.892934 TCCTGAAACAAGTAGCACCAATTT 59.107 37.500 0.00 0.00 0.00 1.82
3028 3598 4.469657 TCCTGAAACAAGTAGCACCAATT 58.530 39.130 0.00 0.00 0.00 2.32
3029 3599 4.098914 TCCTGAAACAAGTAGCACCAAT 57.901 40.909 0.00 0.00 0.00 3.16
3031 3601 3.569194 TTCCTGAAACAAGTAGCACCA 57.431 42.857 0.00 0.00 0.00 4.17
3032 3602 3.304726 GCTTTCCTGAAACAAGTAGCACC 60.305 47.826 0.00 0.00 0.00 5.01
3034 3604 3.550820 TGCTTTCCTGAAACAAGTAGCA 58.449 40.909 0.00 0.00 0.00 3.49
3035 3605 4.773323 ATGCTTTCCTGAAACAAGTAGC 57.227 40.909 0.00 0.00 0.00 3.58
3036 3606 6.076981 ACAATGCTTTCCTGAAACAAGTAG 57.923 37.500 0.00 0.00 0.00 2.57
3037 3607 7.759489 ATACAATGCTTTCCTGAAACAAGTA 57.241 32.000 0.00 2.51 0.00 2.24
3038 3608 6.655078 ATACAATGCTTTCCTGAAACAAGT 57.345 33.333 0.00 0.79 0.00 3.16
3039 3609 6.925165 ACAATACAATGCTTTCCTGAAACAAG 59.075 34.615 0.00 0.00 0.00 3.16
3040 3610 6.700960 CACAATACAATGCTTTCCTGAAACAA 59.299 34.615 0.00 0.00 0.00 2.83
3042 3612 5.119125 GCACAATACAATGCTTTCCTGAAAC 59.881 40.000 0.00 0.00 38.84 2.78
3043 3613 5.229423 GCACAATACAATGCTTTCCTGAAA 58.771 37.500 0.00 0.00 38.84 2.69
3045 3615 4.439305 GCACAATACAATGCTTTCCTGA 57.561 40.909 0.00 0.00 38.84 3.86
3053 3623 4.691860 ACAAGAGAGCACAATACAATGC 57.308 40.909 0.00 0.00 42.39 3.56
3054 3624 6.690098 GCATAACAAGAGAGCACAATACAATG 59.310 38.462 0.00 0.00 0.00 2.82
3055 3625 6.375174 TGCATAACAAGAGAGCACAATACAAT 59.625 34.615 0.00 0.00 0.00 2.71
3056 3626 5.704978 TGCATAACAAGAGAGCACAATACAA 59.295 36.000 0.00 0.00 0.00 2.41
3058 3628 5.801350 TGCATAACAAGAGAGCACAATAC 57.199 39.130 0.00 0.00 0.00 1.89
3059 3629 5.882000 ACATGCATAACAAGAGAGCACAATA 59.118 36.000 0.00 0.00 38.12 1.90
3061 3631 4.074259 ACATGCATAACAAGAGAGCACAA 58.926 39.130 0.00 0.00 38.12 3.33
3062 3632 3.678289 ACATGCATAACAAGAGAGCACA 58.322 40.909 0.00 0.00 38.12 4.57
3064 3634 9.208022 GTATATTACATGCATAACAAGAGAGCA 57.792 33.333 0.00 0.00 39.79 4.26
3065 3635 9.429359 AGTATATTACATGCATAACAAGAGAGC 57.571 33.333 0.00 0.00 0.00 4.09
3286 3912 1.339055 TGCCCGATCCACAGAAGAAAG 60.339 52.381 0.00 0.00 0.00 2.62
3287 3913 0.690192 TGCCCGATCCACAGAAGAAA 59.310 50.000 0.00 0.00 0.00 2.52
3416 4042 1.008403 TGAGACACCCTAGCCTACCT 58.992 55.000 0.00 0.00 0.00 3.08
3541 4167 2.170187 TGCAACACCCTCAAAATTGCTT 59.830 40.909 8.54 0.00 44.69 3.91
3571 4197 4.764679 TGGAAAACAGATCATTGTTCCG 57.235 40.909 9.78 0.00 40.24 4.30
3631 4257 9.094578 AGCTCATTATACTATGTGTGTTATCCT 57.905 33.333 0.00 0.00 0.00 3.24
4067 4954 0.332972 CTCTTTTTGGGGGAGGAGGG 59.667 60.000 0.00 0.00 0.00 4.30
4079 4966 3.753294 TTCTGAGGAGCGTCTCTTTTT 57.247 42.857 9.98 0.00 34.98 1.94
4088 4975 4.260538 GCAACTTTATCATTCTGAGGAGCG 60.261 45.833 0.00 0.00 0.00 5.03
4169 5056 9.984190 GCCCTGAATAACCTATAAGCTATATAC 57.016 37.037 0.00 0.00 0.00 1.47
4244 5131 7.162082 CACCTACAAATTATCCTAGATGGGAC 58.838 42.308 0.00 0.00 38.30 4.46
4273 5160 8.915057 TTGGATCATCAATAAAAAGGCAAAAA 57.085 26.923 0.00 0.00 0.00 1.94
4550 5439 7.389053 CCCTAGATACAAGAATGGCAATTAGAC 59.611 40.741 0.00 0.00 0.00 2.59
4556 5445 6.763715 ATACCCTAGATACAAGAATGGCAA 57.236 37.500 0.00 0.00 0.00 4.52
4612 5505 1.043673 CCCCTCCTAAGGTGACGGAG 61.044 65.000 0.00 0.00 41.59 4.63
4613 5506 1.001248 CCCCTCCTAAGGTGACGGA 59.999 63.158 0.00 0.00 41.59 4.69
4728 5621 5.105554 AGGCTAGTTGTACAGAAGTGATCAG 60.106 44.000 0.00 0.00 0.00 2.90
4788 5681 9.607285 CATTTAACACATTAGTCCAGTGTAAAC 57.393 33.333 0.00 0.00 44.99 2.01
4799 5692 8.780249 GTGACTTACCACATTTAACACATTAGT 58.220 33.333 0.00 0.00 37.04 2.24
4802 5695 7.817418 AGTGACTTACCACATTTAACACATT 57.183 32.000 0.00 0.00 39.42 2.71
4813 5706 3.838244 AGCTCAAAGTGACTTACCACA 57.162 42.857 0.00 0.00 39.42 4.17
4814 5707 3.877508 ACAAGCTCAAAGTGACTTACCAC 59.122 43.478 0.00 0.00 37.32 4.16
4815 5708 3.876914 CACAAGCTCAAAGTGACTTACCA 59.123 43.478 0.00 0.00 35.33 3.25
4816 5709 3.251004 CCACAAGCTCAAAGTGACTTACC 59.749 47.826 0.00 0.00 35.33 2.85
4817 5710 3.877508 ACCACAAGCTCAAAGTGACTTAC 59.122 43.478 0.00 0.00 35.33 2.34
4818 5711 4.150897 ACCACAAGCTCAAAGTGACTTA 57.849 40.909 0.00 0.00 35.33 2.24
4819 5712 3.004752 ACCACAAGCTCAAAGTGACTT 57.995 42.857 9.34 0.00 35.33 3.01
4820 5713 2.717639 ACCACAAGCTCAAAGTGACT 57.282 45.000 9.34 0.00 35.33 3.41
4821 5714 2.808543 CCTACCACAAGCTCAAAGTGAC 59.191 50.000 9.34 0.00 35.33 3.67
4822 5715 2.438021 ACCTACCACAAGCTCAAAGTGA 59.562 45.455 9.34 0.00 35.33 3.41
4823 5716 2.851195 ACCTACCACAAGCTCAAAGTG 58.149 47.619 0.00 0.00 0.00 3.16
4824 5717 4.910458 ATACCTACCACAAGCTCAAAGT 57.090 40.909 0.00 0.00 0.00 2.66
4825 5718 4.142600 GCAATACCTACCACAAGCTCAAAG 60.143 45.833 0.00 0.00 0.00 2.77
4826 5719 3.756434 GCAATACCTACCACAAGCTCAAA 59.244 43.478 0.00 0.00 0.00 2.69
4827 5720 3.009033 AGCAATACCTACCACAAGCTCAA 59.991 43.478 0.00 0.00 0.00 3.02
4828 5721 2.571653 AGCAATACCTACCACAAGCTCA 59.428 45.455 0.00 0.00 0.00 4.26
4829 5722 3.268023 AGCAATACCTACCACAAGCTC 57.732 47.619 0.00 0.00 0.00 4.09
4830 5723 3.264450 AGAAGCAATACCTACCACAAGCT 59.736 43.478 0.00 0.00 0.00 3.74
4831 5724 3.610911 AGAAGCAATACCTACCACAAGC 58.389 45.455 0.00 0.00 0.00 4.01
4832 5725 4.832248 TGAGAAGCAATACCTACCACAAG 58.168 43.478 0.00 0.00 0.00 3.16
4833 5726 4.901197 TGAGAAGCAATACCTACCACAA 57.099 40.909 0.00 0.00 0.00 3.33
4838 5731 7.051000 AGGAAAGAATGAGAAGCAATACCTAC 58.949 38.462 0.00 0.00 0.00 3.18
4858 5751 6.443849 AGATGGATAGAGGTACACAAAGGAAA 59.556 38.462 0.00 0.00 0.00 3.13
4864 5757 8.727100 ATGAATAGATGGATAGAGGTACACAA 57.273 34.615 0.00 0.00 0.00 3.33
4915 5808 7.700322 ATGTACAGCAAAATCGTATAGTCAG 57.300 36.000 0.33 0.00 0.00 3.51
4989 5882 4.098914 ACACAGAAAACCCAAGCTATCA 57.901 40.909 0.00 0.00 0.00 2.15
5080 5973 3.030291 TCCAAAAGCATGAACCAACACT 58.970 40.909 0.00 0.00 0.00 3.55
5248 6141 4.079253 TCTGTTGGAAGATTTACAAGGCC 58.921 43.478 0.00 0.00 0.00 5.19
5255 6148 8.826765 AGGAGATAAACTCTGTTGGAAGATTTA 58.173 33.333 0.00 0.00 44.37 1.40
5267 6160 7.095017 GGAAGTTGAACAAGGAGATAAACTCTG 60.095 40.741 0.00 0.00 44.37 3.35
5268 6161 6.937465 GGAAGTTGAACAAGGAGATAAACTCT 59.063 38.462 0.00 0.00 44.37 3.24
5272 6165 7.889873 TTTGGAAGTTGAACAAGGAGATAAA 57.110 32.000 0.00 0.00 0.00 1.40
5274 6167 7.039784 CCATTTTGGAAGTTGAACAAGGAGATA 60.040 37.037 0.00 0.00 40.96 1.98
5280 6173 5.906073 AGACCATTTTGGAAGTTGAACAAG 58.094 37.500 0.00 0.00 40.96 3.16
5288 6181 3.140144 TCCAGGAAGACCATTTTGGAAGT 59.860 43.478 0.00 0.00 40.96 3.01
5300 6193 9.674068 AGAGAATTAGTAAAATTCCAGGAAGAC 57.326 33.333 8.20 3.41 37.36 3.01
5313 6206 9.832445 CCTGCTACCATAAAGAGAATTAGTAAA 57.168 33.333 0.00 0.00 0.00 2.01
5316 6209 6.183361 CCCCTGCTACCATAAAGAGAATTAGT 60.183 42.308 0.00 0.00 0.00 2.24
5421 6314 2.498167 ACAGAAACCACTGACAGATGC 58.502 47.619 10.08 0.00 40.63 3.91
5578 6489 7.533426 AGTAATTCAGTTTCAAGATGTGATGC 58.467 34.615 0.00 0.00 35.70 3.91
5581 6492 8.097038 AGCTAGTAATTCAGTTTCAAGATGTGA 58.903 33.333 0.00 0.00 0.00 3.58
5631 6568 8.730680 CCACTAATTCAGTTACAAATACAAGCT 58.269 33.333 0.00 0.00 34.26 3.74
5632 6569 7.484959 GCCACTAATTCAGTTACAAATACAAGC 59.515 37.037 0.00 0.00 34.26 4.01
5633 6570 8.730680 AGCCACTAATTCAGTTACAAATACAAG 58.269 33.333 0.00 0.00 34.26 3.16
5634 6571 8.630054 AGCCACTAATTCAGTTACAAATACAA 57.370 30.769 0.00 0.00 34.26 2.41
5635 6572 8.630054 AAGCCACTAATTCAGTTACAAATACA 57.370 30.769 0.00 0.00 34.26 2.29
5679 6616 1.442526 GGCCTGAGACATGCCATTCG 61.443 60.000 11.86 0.00 43.10 3.34
5680 6617 0.106819 AGGCCTGAGACATGCCATTC 60.107 55.000 3.11 0.00 45.39 2.67
5683 6620 2.673200 GGAGGCCTGAGACATGCCA 61.673 63.158 12.00 0.00 45.39 4.92
5687 6624 0.690411 CTCTGGGAGGCCTGAGACAT 60.690 60.000 12.00 0.00 37.78 3.06
5688 6625 1.305633 CTCTGGGAGGCCTGAGACA 60.306 63.158 12.00 2.04 37.78 3.41
5689 6626 2.063378 CCTCTGGGAGGCCTGAGAC 61.063 68.421 12.00 0.00 43.29 3.36
5714 6654 4.914420 CCGCTGTCGCTAGAGCCG 62.914 72.222 1.54 0.00 38.79 5.52
5899 6841 0.179127 ATGTCGAGCACCTCATCGTG 60.179 55.000 0.00 0.00 39.86 4.35
5968 6910 6.440436 CAAATCATCAACACACAAGTCATCA 58.560 36.000 0.00 0.00 0.00 3.07
5976 6918 2.957680 ACAGGCAAATCATCAACACACA 59.042 40.909 0.00 0.00 0.00 3.72
6018 6962 5.063438 GCTGACGAACAACTGCAGAATTATA 59.937 40.000 23.35 0.00 0.00 0.98
6019 6963 4.142816 GCTGACGAACAACTGCAGAATTAT 60.143 41.667 23.35 1.79 0.00 1.28
6020 6964 3.186409 GCTGACGAACAACTGCAGAATTA 59.814 43.478 23.35 0.00 0.00 1.40
6127 7072 6.667007 AAAGAAACCAATTTGACAAAGCAG 57.333 33.333 6.77 0.14 0.00 4.24
6143 7088 4.916870 AGCAACCGACACTTAAAAGAAAC 58.083 39.130 0.00 0.00 0.00 2.78
6151 7098 3.732471 GCAAAACAAGCAACCGACACTTA 60.732 43.478 0.00 0.00 0.00 2.24
6154 7101 0.920664 GCAAAACAAGCAACCGACAC 59.079 50.000 0.00 0.00 0.00 3.67
6164 7111 4.021169 GCACGTTCAAAATGCAAAACAAG 58.979 39.130 0.00 0.00 39.23 3.16
6225 7177 1.106944 ACCAAACCAAACAGGGCTCG 61.107 55.000 0.00 0.00 43.89 5.03
6254 7206 0.905357 GATATGCCAGCCGGATACCT 59.095 55.000 5.05 0.00 0.00 3.08
6273 7225 8.954350 ACACGCCCTAACTATATACTATAACAG 58.046 37.037 0.00 0.00 0.00 3.16
6274 7226 8.868522 ACACGCCCTAACTATATACTATAACA 57.131 34.615 0.00 0.00 0.00 2.41
6277 7229 8.742777 CCAAACACGCCCTAACTATATACTATA 58.257 37.037 0.00 0.00 0.00 1.31
6278 7230 7.234166 ACCAAACACGCCCTAACTATATACTAT 59.766 37.037 0.00 0.00 0.00 2.12
6279 7231 6.550854 ACCAAACACGCCCTAACTATATACTA 59.449 38.462 0.00 0.00 0.00 1.82
6280 7232 5.364735 ACCAAACACGCCCTAACTATATACT 59.635 40.000 0.00 0.00 0.00 2.12
6281 7233 5.604565 ACCAAACACGCCCTAACTATATAC 58.395 41.667 0.00 0.00 0.00 1.47
6282 7234 5.874897 ACCAAACACGCCCTAACTATATA 57.125 39.130 0.00 0.00 0.00 0.86
6283 7235 4.765813 ACCAAACACGCCCTAACTATAT 57.234 40.909 0.00 0.00 0.00 0.86
6284 7236 4.556592 AACCAAACACGCCCTAACTATA 57.443 40.909 0.00 0.00 0.00 1.31
6285 7237 3.428413 AACCAAACACGCCCTAACTAT 57.572 42.857 0.00 0.00 0.00 2.12
6286 7238 2.934886 AACCAAACACGCCCTAACTA 57.065 45.000 0.00 0.00 0.00 2.24
6287 7239 1.951602 GAAACCAAACACGCCCTAACT 59.048 47.619 0.00 0.00 0.00 2.24
6288 7240 1.001048 GGAAACCAAACACGCCCTAAC 60.001 52.381 0.00 0.00 0.00 2.34
6289 7241 1.133730 AGGAAACCAAACACGCCCTAA 60.134 47.619 0.00 0.00 0.00 2.69
6301 7253 1.525077 GGTGCGACACAGGAAACCA 60.525 57.895 11.20 0.00 35.86 3.67
6348 7300 0.248458 CGCACAGGACACCAAACAAC 60.248 55.000 0.00 0.00 0.00 3.32
6361 7313 1.153745 GACTGAGTAGGCCGCACAG 60.154 63.158 19.91 19.91 35.14 3.66
6389 7341 0.883833 AGAGGCCAACTTTTGCATCG 59.116 50.000 5.01 0.00 42.67 3.84
6471 7423 0.600255 AAGAAGACACGGGAGTTGCG 60.600 55.000 0.00 0.00 44.67 4.85
6488 7440 6.389906 GTGAGAGAGAGAGAAAGAGGAAAAG 58.610 44.000 0.00 0.00 0.00 2.27
6509 7461 1.313091 CGATCCAGTCTGACGGGTGA 61.313 60.000 23.25 8.59 34.90 4.02
6510 7462 1.139734 CGATCCAGTCTGACGGGTG 59.860 63.158 23.25 12.70 34.90 4.61
6528 7480 3.615709 GTGGCAGGTTTGGTGGCC 61.616 66.667 0.00 0.00 46.58 5.36
6529 7481 3.615709 GGTGGCAGGTTTGGTGGC 61.616 66.667 0.00 0.00 40.81 5.01
6623 7615 4.899239 GATGTCGAGGCGGGGCAG 62.899 72.222 0.00 0.00 0.00 4.85
6626 7618 4.570663 GACGATGTCGAGGCGGGG 62.571 72.222 9.67 0.00 43.02 5.73
6627 7619 3.758088 CTGACGATGTCGAGGCGGG 62.758 68.421 9.67 0.00 43.02 6.13
6628 7620 2.278206 CTGACGATGTCGAGGCGG 60.278 66.667 9.67 0.04 43.02 6.13
6629 7621 2.278206 CCTGACGATGTCGAGGCG 60.278 66.667 9.67 0.00 43.02 5.52
6630 7622 0.802607 GAACCTGACGATGTCGAGGC 60.803 60.000 9.67 0.00 43.02 4.70
6631 7623 0.179134 GGAACCTGACGATGTCGAGG 60.179 60.000 9.67 8.81 43.02 4.63
6632 7624 0.526211 TGGAACCTGACGATGTCGAG 59.474 55.000 9.67 0.00 43.02 4.04
6633 7625 0.242825 GTGGAACCTGACGATGTCGA 59.757 55.000 9.67 0.00 43.02 4.20
6634 7626 0.038618 TGTGGAACCTGACGATGTCG 60.039 55.000 0.11 0.11 40.42 4.35
6635 7627 1.673033 CCTGTGGAACCTGACGATGTC 60.673 57.143 0.00 0.00 34.36 3.06
6636 7628 0.321671 CCTGTGGAACCTGACGATGT 59.678 55.000 0.00 0.00 34.36 3.06
6637 7629 1.021390 GCCTGTGGAACCTGACGATG 61.021 60.000 0.00 0.00 34.36 3.84
6638 7630 1.296715 GCCTGTGGAACCTGACGAT 59.703 57.895 0.00 0.00 34.36 3.73
6639 7631 2.741092 GCCTGTGGAACCTGACGA 59.259 61.111 0.00 0.00 34.36 4.20
6640 7632 2.738521 CGCCTGTGGAACCTGACG 60.739 66.667 0.00 0.00 34.36 4.35
6641 7633 1.668151 GACGCCTGTGGAACCTGAC 60.668 63.158 0.00 0.00 34.36 3.51
6642 7634 1.816863 GAGACGCCTGTGGAACCTGA 61.817 60.000 0.00 0.00 34.36 3.86
6643 7635 1.374758 GAGACGCCTGTGGAACCTG 60.375 63.158 0.00 0.00 34.36 4.00
6644 7636 1.122019 AAGAGACGCCTGTGGAACCT 61.122 55.000 0.00 0.00 34.36 3.50
6645 7637 0.670854 GAAGAGACGCCTGTGGAACC 60.671 60.000 0.00 0.00 34.36 3.62
6646 7638 0.670854 GGAAGAGACGCCTGTGGAAC 60.671 60.000 0.00 0.00 37.35 3.62
6647 7639 1.118965 TGGAAGAGACGCCTGTGGAA 61.119 55.000 0.00 0.00 0.00 3.53
6648 7640 1.533033 TGGAAGAGACGCCTGTGGA 60.533 57.895 0.00 0.00 0.00 4.02
6649 7641 1.374758 GTGGAAGAGACGCCTGTGG 60.375 63.158 0.00 0.00 0.00 4.17
6650 7642 0.946221 GTGTGGAAGAGACGCCTGTG 60.946 60.000 0.00 0.00 0.00 3.66
6651 7643 1.367840 GTGTGGAAGAGACGCCTGT 59.632 57.895 0.00 0.00 0.00 4.00
6652 7644 1.374758 GGTGTGGAAGAGACGCCTG 60.375 63.158 0.00 0.00 40.30 4.85
6653 7645 1.821061 CTGGTGTGGAAGAGACGCCT 61.821 60.000 0.00 0.00 43.30 5.52
6654 7646 1.374758 CTGGTGTGGAAGAGACGCC 60.375 63.158 0.00 0.00 43.22 5.68
6655 7647 0.667792 GACTGGTGTGGAAGAGACGC 60.668 60.000 0.00 0.00 0.00 5.19
6656 7648 0.038159 GGACTGGTGTGGAAGAGACG 60.038 60.000 0.00 0.00 0.00 4.18
6657 7649 0.038159 CGGACTGGTGTGGAAGAGAC 60.038 60.000 0.00 0.00 0.00 3.36
6658 7650 0.178973 TCGGACTGGTGTGGAAGAGA 60.179 55.000 0.00 0.00 0.00 3.10
6659 7651 0.244994 CTCGGACTGGTGTGGAAGAG 59.755 60.000 0.00 0.00 0.00 2.85
6660 7652 1.816863 GCTCGGACTGGTGTGGAAGA 61.817 60.000 0.00 0.00 0.00 2.87
6661 7653 1.374758 GCTCGGACTGGTGTGGAAG 60.375 63.158 0.00 0.00 0.00 3.46
6662 7654 1.816863 GAGCTCGGACTGGTGTGGAA 61.817 60.000 0.00 0.00 0.00 3.53
6663 7655 2.203640 AGCTCGGACTGGTGTGGA 60.204 61.111 0.00 0.00 0.00 4.02
6664 7656 2.262915 GAGCTCGGACTGGTGTGG 59.737 66.667 0.00 0.00 0.00 4.17
6665 7657 2.262915 GGAGCTCGGACTGGTGTG 59.737 66.667 7.83 0.00 0.00 3.82
6666 7658 2.997897 GGGAGCTCGGACTGGTGT 60.998 66.667 7.83 0.00 0.00 4.16
6667 7659 2.681778 AGGGAGCTCGGACTGGTG 60.682 66.667 7.83 0.00 0.00 4.17
6668 7660 2.363147 GAGGGAGCTCGGACTGGT 60.363 66.667 7.83 0.00 0.00 4.00
6669 7661 3.522731 CGAGGGAGCTCGGACTGG 61.523 72.222 7.83 3.61 42.51 4.00
6670 7662 2.438614 TCGAGGGAGCTCGGACTG 60.439 66.667 7.83 0.00 45.82 3.51
6671 7663 2.438795 GTCGAGGGAGCTCGGACT 60.439 66.667 7.83 5.75 45.82 3.85
6672 7664 3.878519 CGTCGAGGGAGCTCGGAC 61.879 72.222 7.83 11.06 45.82 4.79
6675 7667 4.180946 CACCGTCGAGGGAGCTCG 62.181 72.222 29.83 6.76 46.96 5.03
6676 7668 4.500116 GCACCGTCGAGGGAGCTC 62.500 72.222 30.97 4.71 46.96 4.09
6678 7670 4.500116 GAGCACCGTCGAGGGAGC 62.500 72.222 31.10 31.10 46.96 4.70
6679 7671 3.827898 GGAGCACCGTCGAGGGAG 61.828 72.222 29.83 22.74 46.96 4.30
6680 7672 4.361971 AGGAGCACCGTCGAGGGA 62.362 66.667 29.83 0.00 46.96 4.20
6681 7673 3.827898 GAGGAGCACCGTCGAGGG 61.828 72.222 22.23 22.23 46.96 4.30
6683 7675 3.062466 TGGAGGAGCACCGTCGAG 61.062 66.667 0.00 0.00 41.83 4.04
6684 7676 3.371063 GTGGAGGAGCACCGTCGA 61.371 66.667 0.00 0.00 41.83 4.20
6685 7677 3.680786 TGTGGAGGAGCACCGTCG 61.681 66.667 0.00 0.00 41.83 5.12
6686 7678 2.048127 GTGTGGAGGAGCACCGTC 60.048 66.667 0.00 0.00 41.83 4.79
6687 7679 3.626924 GGTGTGGAGGAGCACCGT 61.627 66.667 0.00 0.00 44.52 4.83
6690 7682 2.032681 GTGGGTGTGGAGGAGCAC 59.967 66.667 0.00 0.00 35.07 4.40
6691 7683 3.625897 CGTGGGTGTGGAGGAGCA 61.626 66.667 0.00 0.00 0.00 4.26
6692 7684 4.394712 CCGTGGGTGTGGAGGAGC 62.395 72.222 0.00 0.00 0.00 4.70
6693 7685 2.603473 TCCGTGGGTGTGGAGGAG 60.603 66.667 0.00 0.00 0.00 3.69
6694 7686 2.603473 CTCCGTGGGTGTGGAGGA 60.603 66.667 0.24 0.00 46.55 3.71
6740 7849 2.687566 TCCCCTCGCCCCTTCTTC 60.688 66.667 0.00 0.00 0.00 2.87
6741 7850 2.689034 CTCCCCTCGCCCCTTCTT 60.689 66.667 0.00 0.00 0.00 2.52
6742 7851 3.254035 TTCTCCCCTCGCCCCTTCT 62.254 63.158 0.00 0.00 0.00 2.85
6743 7852 2.687566 TTCTCCCCTCGCCCCTTC 60.688 66.667 0.00 0.00 0.00 3.46
6845 7957 4.184629 ACTGAAATCCGTAGCAATCTCAC 58.815 43.478 0.00 0.00 0.00 3.51
6857 7969 4.083802 GGAACAAGTCTGAACTGAAATCCG 60.084 45.833 0.00 0.00 35.36 4.18
6920 8032 4.608948 TCTGGACCTGAACTTTTCTCTC 57.391 45.455 0.00 0.00 0.00 3.20
7029 8141 6.708502 TCGATGGACAAAGAGAACATGTAAAA 59.291 34.615 0.00 0.00 0.00 1.52
7043 8155 4.486125 TCTGGATCATTCGATGGACAAA 57.514 40.909 0.00 0.00 29.66 2.83
7053 8165 6.735145 GCATTTCAACTGGATCTGGATCATTC 60.735 42.308 11.93 0.00 39.54 2.67
7087 8199 7.431376 GCTTAATCCAATTAACTTTTCGCTACC 59.569 37.037 0.00 0.00 31.84 3.18
7089 8201 8.276252 AGCTTAATCCAATTAACTTTTCGCTA 57.724 30.769 0.00 0.00 31.32 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.