Multiple sequence alignment - TraesCS3D01G507800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G507800 chr3D 100.000 4958 0 0 1 4958 594189884 594194841 0.000000e+00 9156.0
1 TraesCS3D01G507800 chr3D 100.000 2997 0 0 5385 8381 594195268 594198264 0.000000e+00 5535.0
2 TraesCS3D01G507800 chr3D 92.069 2736 137 46 887 3584 594003951 594001258 0.000000e+00 3777.0
3 TraesCS3D01G507800 chr3D 88.974 2231 158 42 1745 3916 594489716 594487515 0.000000e+00 2676.0
4 TraesCS3D01G507800 chr3D 88.302 1402 111 23 3590 4958 594147042 594148423 0.000000e+00 1631.0
5 TraesCS3D01G507800 chr3D 86.512 1468 121 36 895 2332 594144518 594145938 0.000000e+00 1543.0
6 TraesCS3D01G507800 chr3D 90.564 1081 73 15 3890 4958 594001210 594000147 0.000000e+00 1404.0
7 TraesCS3D01G507800 chr3D 94.058 892 46 4 6101 6992 593999232 593998348 0.000000e+00 1347.0
8 TraesCS3D01G507800 chr3D 88.551 987 81 15 3986 4958 594487494 594486526 0.000000e+00 1168.0
9 TraesCS3D01G507800 chr3D 90.268 822 56 13 2345 3143 594146078 594146898 0.000000e+00 1053.0
10 TraesCS3D01G507800 chr3D 86.814 857 65 24 877 1703 594490559 594489721 0.000000e+00 913.0
11 TraesCS3D01G507800 chr3D 83.896 888 84 30 6101 6961 594149347 594150202 0.000000e+00 793.0
12 TraesCS3D01G507800 chr3D 91.557 533 36 5 5580 6103 593999796 593999264 0.000000e+00 726.0
13 TraesCS3D01G507800 chr3D 88.104 538 50 8 5580 6103 594148778 594149315 1.990000e-175 627.0
14 TraesCS3D01G507800 chr3D 86.809 470 58 4 1 467 594004519 594004051 9.640000e-144 521.0
15 TraesCS3D01G507800 chr3D 86.582 395 23 11 466 831 40740419 40740812 7.830000e-110 409.0
16 TraesCS3D01G507800 chr3D 84.826 402 40 15 7114 7502 593998270 593997877 1.320000e-102 385.0
17 TraesCS3D01G507800 chr3D 81.871 342 26 14 8052 8381 228933312 228932995 1.080000e-63 255.0
18 TraesCS3D01G507800 chr3D 97.101 138 3 1 465 601 568020423 568020560 1.820000e-56 231.0
19 TraesCS3D01G507800 chr3D 97.059 136 4 0 466 601 588675021 588675156 6.540000e-56 230.0
20 TraesCS3D01G507800 chr3D 97.059 136 3 1 466 601 607570600 607570734 2.350000e-55 228.0
21 TraesCS3D01G507800 chr3B 88.273 4255 273 86 832 4958 797751428 797747272 0.000000e+00 4885.0
22 TraesCS3D01G507800 chr3B 92.624 3308 149 46 884 4110 797446474 797449767 0.000000e+00 4669.0
23 TraesCS3D01G507800 chr3B 91.827 1248 67 15 1818 3050 797129322 797130549 0.000000e+00 1707.0
24 TraesCS3D01G507800 chr3B 94.700 1000 43 6 5572 6561 797451049 797452048 0.000000e+00 1544.0
25 TraesCS3D01G507800 chr3B 94.704 812 20 7 4155 4958 797449892 797450688 0.000000e+00 1240.0
26 TraesCS3D01G507800 chr3B 95.717 467 19 1 1 467 797445231 797445696 0.000000e+00 750.0
27 TraesCS3D01G507800 chr3B 84.718 746 49 30 868 1586 797128622 797129329 0.000000e+00 686.0
28 TraesCS3D01G507800 chr3B 85.045 662 65 14 6101 6757 797727793 797727161 1.970000e-180 643.0
29 TraesCS3D01G507800 chr3B 89.703 505 17 17 7891 8381 797453141 797453624 5.560000e-171 612.0
30 TraesCS3D01G507800 chr3B 87.970 532 46 8 5590 6103 797728356 797727825 5.560000e-171 612.0
31 TraesCS3D01G507800 chr3B 83.077 520 29 16 7114 7613 797452420 797452900 1.300000e-112 418.0
32 TraesCS3D01G507800 chr3B 91.781 292 22 2 6702 6993 797452047 797452336 1.010000e-108 405.0
33 TraesCS3D01G507800 chr3B 88.152 211 24 1 6762 6972 797726047 797725838 5.020000e-62 250.0
34 TraesCS3D01G507800 chr3B 95.833 144 6 0 5438 5581 797450823 797450966 5.060000e-57 233.0
35 TraesCS3D01G507800 chr3B 88.372 172 10 6 3235 3400 797130558 797130725 1.850000e-46 198.0
36 TraesCS3D01G507800 chr3B 97.674 43 1 0 5385 5427 797450792 797450834 3.240000e-09 75.0
37 TraesCS3D01G507800 chr3A 92.976 1865 101 13 1740 3584 724881603 724879749 0.000000e+00 2691.0
38 TraesCS3D01G507800 chr3A 91.095 1078 68 13 3890 4958 724879701 724878643 0.000000e+00 1434.0
39 TraesCS3D01G507800 chr3A 94.295 894 45 3 6101 6994 724877739 724876852 0.000000e+00 1363.0
40 TraesCS3D01G507800 chr3A 89.989 889 62 14 832 1709 724882475 724881603 0.000000e+00 1123.0
41 TraesCS3D01G507800 chr3A 91.729 532 35 5 5580 6102 724878303 724877772 0.000000e+00 730.0
42 TraesCS3D01G507800 chr3A 86.145 664 63 12 6101 6762 725069132 725068496 0.000000e+00 689.0
43 TraesCS3D01G507800 chr3A 87.424 493 28 20 7891 8366 724875614 724875139 3.440000e-148 536.0
44 TraesCS3D01G507800 chr3A 82.340 470 48 21 1 467 724882913 724882476 7.940000e-100 375.0
45 TraesCS3D01G507800 chr3A 95.154 227 11 0 5877 6103 725069390 725069164 8.000000e-95 359.0
46 TraesCS3D01G507800 chr3A 86.111 288 31 8 5590 5869 725069872 725069586 1.370000e-77 302.0
47 TraesCS3D01G507800 chr3A 80.737 353 32 15 7124 7469 724876512 724876189 8.400000e-60 243.0
48 TraesCS3D01G507800 chr3A 87.786 131 10 3 7503 7633 724875994 724875870 1.880000e-31 148.0
49 TraesCS3D01G507800 chr3A 86.087 115 8 4 6997 7111 724876788 724876682 5.320000e-22 117.0
50 TraesCS3D01G507800 chr7A 92.857 1862 105 14 1740 3584 92386672 92388522 0.000000e+00 2676.0
51 TraesCS3D01G507800 chr7A 91.095 1078 68 13 3890 4958 92388570 92389628 0.000000e+00 1434.0
52 TraesCS3D01G507800 chr7A 94.283 892 38 4 6101 6992 92390532 92391410 0.000000e+00 1352.0
53 TraesCS3D01G507800 chr7A 87.470 846 51 15 887 1709 92385859 92386672 0.000000e+00 924.0
54 TraesCS3D01G507800 chr7A 91.932 533 34 5 5580 6103 92389968 92390500 0.000000e+00 737.0
55 TraesCS3D01G507800 chr7A 86.892 473 37 15 7114 7574 92391488 92391947 2.700000e-139 507.0
56 TraesCS3D01G507800 chr7A 84.906 371 43 6 97 467 92385402 92385759 6.180000e-96 363.0
57 TraesCS3D01G507800 chr7A 83.784 111 4 5 7650 7746 92391976 92392086 8.960000e-15 93.5
58 TraesCS3D01G507800 chrUn 88.858 2154 154 40 1821 3916 45794550 45792425 0.000000e+00 2569.0
59 TraesCS3D01G507800 chrUn 88.551 987 81 15 3986 4958 45792404 45791436 0.000000e+00 1168.0
60 TraesCS3D01G507800 chrUn 95.887 389 13 3 2315 2700 480171108 480171496 1.990000e-175 627.0
61 TraesCS3D01G507800 chrUn 94.515 237 12 1 599 834 276883503 276883739 1.720000e-96 364.0
62 TraesCS3D01G507800 chr4A 94.958 238 9 3 599 833 626441070 626441307 3.700000e-98 370.0
63 TraesCS3D01G507800 chr7B 94.915 236 11 1 599 833 186861991 186861756 1.330000e-97 368.0
64 TraesCS3D01G507800 chr1D 94.894 235 11 1 599 832 86146833 86146599 4.780000e-97 366.0
65 TraesCS3D01G507800 chr1D 94.561 239 9 4 599 833 414441649 414441411 4.780000e-97 366.0
66 TraesCS3D01G507800 chr1D 94.142 239 10 4 599 833 455532442 455532680 2.220000e-95 361.0
67 TraesCS3D01G507800 chr5D 94.492 236 12 1 599 833 135058510 135058275 6.180000e-96 363.0
68 TraesCS3D01G507800 chr5B 94.492 236 11 2 599 832 606483797 606484032 6.180000e-96 363.0
69 TraesCS3D01G507800 chr4D 94.118 238 12 2 599 834 374299003 374299240 2.220000e-95 361.0
70 TraesCS3D01G507800 chr4D 95.588 136 6 0 466 601 389518815 389518950 1.420000e-52 219.0
71 TraesCS3D01G507800 chr7D 97.122 139 4 0 466 604 136187701 136187563 1.410000e-57 235.0
72 TraesCS3D01G507800 chr7D 96.429 140 4 1 466 604 45011234 45011095 6.540000e-56 230.0
73 TraesCS3D01G507800 chr7D 90.164 61 4 1 66 124 156201007 156200947 2.510000e-10 78.7
74 TraesCS3D01G507800 chr6D 97.101 138 4 0 467 604 25652110 25651973 5.060000e-57 233.0
75 TraesCS3D01G507800 chr6D 97.080 137 2 2 466 600 48086169 48086305 6.540000e-56 230.0
76 TraesCS3D01G507800 chr2A 78.632 351 58 12 7115 7465 526303818 526304151 5.090000e-52 217.0
77 TraesCS3D01G507800 chr2A 95.402 87 3 1 6017 6103 526302575 526302660 4.080000e-28 137.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G507800 chr3D 594189884 594198264 8380 False 7345.500000 9156 100.000000 1 8381 2 chr3D.!!$F6 8380
1 TraesCS3D01G507800 chr3D 594486526 594490559 4033 True 1585.666667 2676 88.113000 877 4958 3 chr3D.!!$R3 4081
2 TraesCS3D01G507800 chr3D 593997877 594004519 6642 True 1360.000000 3777 89.980500 1 7502 6 chr3D.!!$R2 7501
3 TraesCS3D01G507800 chr3D 594144518 594150202 5684 False 1129.400000 1631 87.416400 895 6961 5 chr3D.!!$F5 6066
4 TraesCS3D01G507800 chr3B 797747272 797751428 4156 True 4885.000000 4885 88.273000 832 4958 1 chr3B.!!$R1 4126
5 TraesCS3D01G507800 chr3B 797445231 797453624 8393 False 1105.111111 4669 92.868111 1 8381 9 chr3B.!!$F2 8380
6 TraesCS3D01G507800 chr3B 797128622 797130725 2103 False 863.666667 1707 88.305667 868 3400 3 chr3B.!!$F1 2532
7 TraesCS3D01G507800 chr3B 797725838 797728356 2518 True 501.666667 643 87.055667 5590 6972 3 chr3B.!!$R2 1382
8 TraesCS3D01G507800 chr3A 724875139 724882913 7774 True 876.000000 2691 88.445800 1 8366 10 chr3A.!!$R1 8365
9 TraesCS3D01G507800 chr3A 725068496 725069872 1376 True 450.000000 689 89.136667 5590 6762 3 chr3A.!!$R2 1172
10 TraesCS3D01G507800 chr7A 92385402 92392086 6684 False 1010.812500 2676 89.152375 97 7746 8 chr7A.!!$F1 7649
11 TraesCS3D01G507800 chrUn 45791436 45794550 3114 True 1868.500000 2569 88.704500 1821 4958 2 chrUn.!!$R1 3137

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
494 500 0.036732 AATCTGCACCCGAGCTCAAA 59.963 50.000 15.40 0.0 34.99 2.69 F
682 688 0.037590 TTGCCACGCCTTACAGGAAT 59.962 50.000 0.00 0.0 37.67 3.01 F
819 825 0.390492 CATATGAGCTCGGGTGCAGA 59.610 55.000 9.64 0.0 34.99 4.26 F
822 828 0.463295 ATGAGCTCGGGTGCAGAATG 60.463 55.000 9.64 0.0 40.87 2.67 F
1607 2504 0.464452 GATACTCCGAACTGTGGGGG 59.536 60.000 0.00 0.0 0.00 5.40 F
1957 2891 0.471022 TGGCTACAGGTCAGTCCACA 60.471 55.000 0.00 0.0 39.02 4.17 F
2238 3186 2.457366 AGCTCGTAGGAAAACACTGG 57.543 50.000 0.00 0.0 0.00 4.00 F
3040 4152 2.967270 GCCTCAAGCATCCAAACCT 58.033 52.632 0.00 0.0 42.97 3.50 F
4244 5639 1.228063 CCTCCCCATCCAGCGAATG 60.228 63.158 0.00 0.0 0.00 2.67 F
5681 7189 0.318762 GTGAACCTGCTCCTCTTCGT 59.681 55.000 0.00 0.0 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1614 2511 0.259647 TAGTACCCTGAAGGCGCCTA 59.740 55.000 33.07 15.15 40.58 3.93 R
1615 2512 1.001248 TAGTACCCTGAAGGCGCCT 59.999 57.895 27.08 27.08 40.58 5.52 R
2371 3447 1.280421 GACAGAGGAGGAGGCAATGTT 59.720 52.381 0.00 0.00 0.00 2.71 R
2829 3939 4.157105 TCACAGTGGATGCATCATTTCAAG 59.843 41.667 27.25 13.77 0.00 3.02 R
3360 4489 3.562973 GCACCATATCAACTGTGATGAGG 59.437 47.826 0.00 4.14 44.49 3.86 R
3622 4896 1.131638 ACAAGGTGAGGCTTGACTCA 58.868 50.000 1.44 1.44 44.74 3.41 R
4208 5601 1.112315 GGTGGTGGTTTCACATGGCA 61.112 55.000 0.00 0.00 45.32 4.92 R
4429 5826 1.045407 ACAGGAAGTGGTGAACGCTA 58.955 50.000 0.00 0.00 39.50 4.26 R
6136 7885 0.037326 CTACTTGCCGTTGCCTCAGA 60.037 55.000 0.00 0.00 36.33 3.27 R
7471 10594 0.303493 GCCACCATTATGTACGCACG 59.697 55.000 0.00 0.00 0.00 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 66 2.543430 CCTGAAATTTTTGTTGGCACCG 59.457 45.455 0.00 0.00 0.00 4.94
66 68 2.093447 TGAAATTTTTGTTGGCACCGGT 60.093 40.909 0.00 0.00 0.00 5.28
161 165 5.777732 AGAAGTAGAAGCCCCACTATATCTG 59.222 44.000 0.00 0.00 0.00 2.90
172 176 6.712276 CCCCACTATATCTGTTAGGGATTTC 58.288 44.000 0.00 0.00 36.96 2.17
254 260 0.179040 GGGGATCGCCGGAATTGTTA 60.179 55.000 13.74 0.00 33.83 2.41
276 282 1.596477 GATGCGCTGCTTAGAGGGG 60.596 63.158 9.73 0.00 0.00 4.79
279 285 3.019003 GCGCTGCTTAGAGGGGTGA 62.019 63.158 0.00 0.00 0.00 4.02
458 464 9.771534 GTAGGAAGAAGATGAATAGTGCTAATT 57.228 33.333 0.00 0.00 0.00 1.40
466 472 9.643693 AAGATGAATAGTGCTAATTTGTTTTGG 57.356 29.630 0.00 0.00 0.00 3.28
467 473 9.023962 AGATGAATAGTGCTAATTTGTTTTGGA 57.976 29.630 0.00 0.00 0.00 3.53
468 474 8.986477 ATGAATAGTGCTAATTTGTTTTGGAC 57.014 30.769 0.00 0.00 32.94 4.02
469 475 7.081349 TGAATAGTGCTAATTTGTTTTGGACG 58.919 34.615 0.00 0.00 36.71 4.79
470 476 3.638484 AGTGCTAATTTGTTTTGGACGC 58.362 40.909 0.00 0.00 36.71 5.19
471 477 2.403698 GTGCTAATTTGTTTTGGACGCG 59.596 45.455 3.53 3.53 0.00 6.01
472 478 1.982913 GCTAATTTGTTTTGGACGCGG 59.017 47.619 12.47 0.00 0.00 6.46
473 479 1.982913 CTAATTTGTTTTGGACGCGGC 59.017 47.619 12.47 7.53 0.00 6.53
474 480 0.387565 AATTTGTTTTGGACGCGGCT 59.612 45.000 13.91 0.00 0.00 5.52
475 481 1.240256 ATTTGTTTTGGACGCGGCTA 58.760 45.000 13.91 0.76 0.00 3.93
476 482 1.022735 TTTGTTTTGGACGCGGCTAA 58.977 45.000 13.91 10.28 0.00 3.09
477 483 1.240256 TTGTTTTGGACGCGGCTAAT 58.760 45.000 12.95 0.00 0.00 1.73
478 484 0.800012 TGTTTTGGACGCGGCTAATC 59.200 50.000 12.95 9.16 0.00 1.75
479 485 1.084289 GTTTTGGACGCGGCTAATCT 58.916 50.000 12.95 0.00 0.00 2.40
480 486 1.083489 TTTTGGACGCGGCTAATCTG 58.917 50.000 12.95 0.00 0.00 2.90
481 487 1.366111 TTTGGACGCGGCTAATCTGC 61.366 55.000 12.95 0.00 43.66 4.26
486 492 3.272334 GCGGCTAATCTGCACCCG 61.272 66.667 0.00 0.00 46.35 5.28
487 493 2.499205 CGGCTAATCTGCACCCGA 59.501 61.111 0.00 0.00 41.34 5.14
488 494 1.592669 CGGCTAATCTGCACCCGAG 60.593 63.158 0.00 0.00 41.34 4.63
489 495 1.889573 GGCTAATCTGCACCCGAGC 60.890 63.158 0.00 0.00 34.04 5.03
490 496 1.144936 GCTAATCTGCACCCGAGCT 59.855 57.895 0.00 0.00 34.99 4.09
491 497 0.878086 GCTAATCTGCACCCGAGCTC 60.878 60.000 2.73 2.73 34.99 4.09
492 498 0.461548 CTAATCTGCACCCGAGCTCA 59.538 55.000 15.40 0.00 34.99 4.26
493 499 0.901827 TAATCTGCACCCGAGCTCAA 59.098 50.000 15.40 0.00 34.99 3.02
494 500 0.036732 AATCTGCACCCGAGCTCAAA 59.963 50.000 15.40 0.00 34.99 2.69
495 501 0.254178 ATCTGCACCCGAGCTCAAAT 59.746 50.000 15.40 0.00 34.99 2.32
496 502 0.674581 TCTGCACCCGAGCTCAAATG 60.675 55.000 15.40 9.02 34.99 2.32
497 503 0.674581 CTGCACCCGAGCTCAAATGA 60.675 55.000 15.40 0.00 34.99 2.57
498 504 0.674581 TGCACCCGAGCTCAAATGAG 60.675 55.000 15.40 6.05 44.75 2.90
507 513 3.840831 CTCAAATGAGCTCGGGTGA 57.159 52.632 9.64 10.63 35.13 4.02
508 514 2.099141 CTCAAATGAGCTCGGGTGAA 57.901 50.000 9.64 0.00 35.13 3.18
509 515 1.734465 CTCAAATGAGCTCGGGTGAAC 59.266 52.381 9.64 0.00 35.13 3.18
510 516 1.071542 TCAAATGAGCTCGGGTGAACA 59.928 47.619 9.64 0.00 0.00 3.18
511 517 1.466167 CAAATGAGCTCGGGTGAACAG 59.534 52.381 9.64 0.00 0.00 3.16
512 518 0.687354 AATGAGCTCGGGTGAACAGT 59.313 50.000 9.64 0.00 0.00 3.55
513 519 1.557099 ATGAGCTCGGGTGAACAGTA 58.443 50.000 9.64 0.00 0.00 2.74
514 520 1.334160 TGAGCTCGGGTGAACAGTAA 58.666 50.000 9.64 0.00 0.00 2.24
515 521 1.689813 TGAGCTCGGGTGAACAGTAAA 59.310 47.619 9.64 0.00 0.00 2.01
516 522 2.103432 TGAGCTCGGGTGAACAGTAAAA 59.897 45.455 9.64 0.00 0.00 1.52
517 523 3.244422 TGAGCTCGGGTGAACAGTAAAAT 60.244 43.478 9.64 0.00 0.00 1.82
518 524 3.335579 AGCTCGGGTGAACAGTAAAATC 58.664 45.455 0.00 0.00 0.00 2.17
519 525 2.093783 GCTCGGGTGAACAGTAAAATCG 59.906 50.000 0.00 0.00 0.00 3.34
520 526 3.581755 CTCGGGTGAACAGTAAAATCGA 58.418 45.455 0.00 0.00 0.00 3.59
521 527 3.991773 CTCGGGTGAACAGTAAAATCGAA 59.008 43.478 0.00 0.00 0.00 3.71
522 528 4.378774 TCGGGTGAACAGTAAAATCGAAA 58.621 39.130 0.00 0.00 0.00 3.46
523 529 4.815308 TCGGGTGAACAGTAAAATCGAAAA 59.185 37.500 0.00 0.00 0.00 2.29
524 530 5.296283 TCGGGTGAACAGTAAAATCGAAAAA 59.704 36.000 0.00 0.00 0.00 1.94
571 577 9.487790 TTTTTGAGAGAAACATTGACAAAAGTT 57.512 25.926 0.00 0.00 37.18 2.66
579 585 9.463443 AGAAACATTGACAAAAGTTATAAGTGC 57.537 29.630 9.07 0.00 0.00 4.40
580 586 8.587952 AAACATTGACAAAAGTTATAAGTGCC 57.412 30.769 9.07 0.00 0.00 5.01
581 587 7.524717 ACATTGACAAAAGTTATAAGTGCCT 57.475 32.000 0.00 0.00 0.00 4.75
582 588 7.370383 ACATTGACAAAAGTTATAAGTGCCTG 58.630 34.615 0.00 0.00 0.00 4.85
583 589 5.371115 TGACAAAAGTTATAAGTGCCTGC 57.629 39.130 0.00 0.00 0.00 4.85
584 590 4.824537 TGACAAAAGTTATAAGTGCCTGCA 59.175 37.500 0.00 0.00 0.00 4.41
585 591 5.300539 TGACAAAAGTTATAAGTGCCTGCAA 59.699 36.000 0.00 0.00 0.00 4.08
586 592 6.155475 ACAAAAGTTATAAGTGCCTGCAAA 57.845 33.333 0.00 0.00 0.00 3.68
587 593 6.578023 ACAAAAGTTATAAGTGCCTGCAAAA 58.422 32.000 0.00 0.00 0.00 2.44
588 594 7.044798 ACAAAAGTTATAAGTGCCTGCAAAAA 58.955 30.769 0.00 0.00 0.00 1.94
616 622 9.268268 TCGTCATGAAAACAAAAATAGTACTCT 57.732 29.630 0.00 0.00 0.00 3.24
617 623 9.318041 CGTCATGAAAACAAAAATAGTACTCTG 57.682 33.333 0.00 0.00 0.00 3.35
632 638 9.998106 AATAGTACTCTGAAAAAGCTACTTTCA 57.002 29.630 18.13 18.13 39.79 2.69
633 639 9.998106 ATAGTACTCTGAAAAAGCTACTTTCAA 57.002 29.630 19.14 12.10 41.10 2.69
634 640 8.732746 AGTACTCTGAAAAAGCTACTTTCAAA 57.267 30.769 19.14 9.92 41.10 2.69
635 641 8.613482 AGTACTCTGAAAAAGCTACTTTCAAAC 58.387 33.333 19.14 15.25 41.10 2.93
636 642 6.487103 ACTCTGAAAAAGCTACTTTCAAACG 58.513 36.000 19.14 14.03 41.10 3.60
637 643 5.270853 TCTGAAAAAGCTACTTTCAAACGC 58.729 37.500 19.14 0.00 41.10 4.84
638 644 4.987832 TGAAAAAGCTACTTTCAAACGCA 58.012 34.783 17.31 0.00 39.28 5.24
639 645 5.587289 TGAAAAAGCTACTTTCAAACGCAT 58.413 33.333 17.31 0.00 39.28 4.73
640 646 6.039616 TGAAAAAGCTACTTTCAAACGCATT 58.960 32.000 17.31 0.00 39.28 3.56
641 647 6.533367 TGAAAAAGCTACTTTCAAACGCATTT 59.467 30.769 17.31 0.00 39.28 2.32
642 648 6.902224 AAAAGCTACTTTCAAACGCATTTT 57.098 29.167 0.00 0.00 31.99 1.82
643 649 5.888412 AAGCTACTTTCAAACGCATTTTG 57.112 34.783 0.00 2.03 45.38 2.44
651 657 3.492725 CAAACGCATTTTGAAGCACTG 57.507 42.857 2.24 0.00 46.76 3.66
652 658 3.114809 CAAACGCATTTTGAAGCACTGA 58.885 40.909 2.24 0.00 46.76 3.41
653 659 3.435105 AACGCATTTTGAAGCACTGAA 57.565 38.095 0.00 0.00 0.00 3.02
654 660 3.648339 ACGCATTTTGAAGCACTGAAT 57.352 38.095 0.00 0.00 0.00 2.57
655 661 3.981211 ACGCATTTTGAAGCACTGAATT 58.019 36.364 0.00 0.00 0.00 2.17
656 662 4.370917 ACGCATTTTGAAGCACTGAATTT 58.629 34.783 0.00 0.00 0.00 1.82
657 663 4.209703 ACGCATTTTGAAGCACTGAATTTG 59.790 37.500 0.00 0.00 0.00 2.32
658 664 4.209703 CGCATTTTGAAGCACTGAATTTGT 59.790 37.500 0.00 0.00 0.00 2.83
659 665 5.276963 CGCATTTTGAAGCACTGAATTTGTT 60.277 36.000 0.00 0.00 0.00 2.83
660 666 6.488817 GCATTTTGAAGCACTGAATTTGTTT 58.511 32.000 0.00 0.00 0.00 2.83
661 667 6.968335 GCATTTTGAAGCACTGAATTTGTTTT 59.032 30.769 0.00 0.00 0.00 2.43
662 668 7.485595 GCATTTTGAAGCACTGAATTTGTTTTT 59.514 29.630 0.00 0.00 0.00 1.94
679 685 0.671251 TTTTTGCCACGCCTTACAGG 59.329 50.000 0.00 0.00 38.80 4.00
680 686 0.179015 TTTTGCCACGCCTTACAGGA 60.179 50.000 0.00 0.00 37.67 3.86
681 687 0.179015 TTTGCCACGCCTTACAGGAA 60.179 50.000 0.00 0.00 37.67 3.36
682 688 0.037590 TTGCCACGCCTTACAGGAAT 59.962 50.000 0.00 0.00 37.67 3.01
683 689 0.676466 TGCCACGCCTTACAGGAATG 60.676 55.000 0.00 0.00 37.67 2.67
684 690 0.676782 GCCACGCCTTACAGGAATGT 60.677 55.000 0.00 0.00 37.67 2.71
685 691 1.086696 CCACGCCTTACAGGAATGTG 58.913 55.000 0.00 0.00 37.67 3.21
686 692 1.338674 CCACGCCTTACAGGAATGTGA 60.339 52.381 10.25 0.00 37.67 3.58
687 693 2.632377 CACGCCTTACAGGAATGTGAT 58.368 47.619 0.00 0.00 37.67 3.06
688 694 3.009723 CACGCCTTACAGGAATGTGATT 58.990 45.455 0.00 0.00 37.67 2.57
689 695 3.440173 CACGCCTTACAGGAATGTGATTT 59.560 43.478 0.00 0.00 37.67 2.17
690 696 3.689649 ACGCCTTACAGGAATGTGATTTC 59.310 43.478 0.00 0.00 37.67 2.17
691 697 3.689161 CGCCTTACAGGAATGTGATTTCA 59.311 43.478 0.00 0.00 37.67 2.69
692 698 4.336433 CGCCTTACAGGAATGTGATTTCAT 59.664 41.667 0.00 0.00 37.67 2.57
693 699 5.585390 GCCTTACAGGAATGTGATTTCATG 58.415 41.667 0.00 0.00 41.77 3.07
694 700 5.357878 GCCTTACAGGAATGTGATTTCATGA 59.642 40.000 5.92 0.00 39.18 3.07
695 701 6.040166 GCCTTACAGGAATGTGATTTCATGAT 59.960 38.462 0.00 0.00 39.18 2.45
696 702 7.423199 CCTTACAGGAATGTGATTTCATGATG 58.577 38.462 0.00 0.00 39.18 3.07
697 703 7.283807 CCTTACAGGAATGTGATTTCATGATGA 59.716 37.037 0.00 0.00 39.18 2.92
698 704 8.578448 TTACAGGAATGTGATTTCATGATGAA 57.422 30.769 3.29 3.29 39.18 2.57
699 705 7.655521 ACAGGAATGTGATTTCATGATGAAT 57.344 32.000 8.90 0.00 39.18 2.57
700 706 8.074613 ACAGGAATGTGATTTCATGATGAATT 57.925 30.769 8.90 5.47 39.18 2.17
701 707 8.537016 ACAGGAATGTGATTTCATGATGAATTT 58.463 29.630 8.90 0.00 39.18 1.82
702 708 9.378551 CAGGAATGTGATTTCATGATGAATTTT 57.621 29.630 8.90 0.00 39.18 1.82
703 709 9.953565 AGGAATGTGATTTCATGATGAATTTTT 57.046 25.926 8.90 0.00 36.11 1.94
704 710 9.982291 GGAATGTGATTTCATGATGAATTTTTG 57.018 29.630 8.90 0.00 36.11 2.44
705 711 9.485591 GAATGTGATTTCATGATGAATTTTTGC 57.514 29.630 8.90 0.00 36.11 3.68
706 712 7.964604 TGTGATTTCATGATGAATTTTTGCA 57.035 28.000 8.90 1.87 36.11 4.08
707 713 8.024146 TGTGATTTCATGATGAATTTTTGCAG 57.976 30.769 8.90 0.00 36.11 4.41
708 714 7.118535 TGTGATTTCATGATGAATTTTTGCAGG 59.881 33.333 8.90 0.00 36.11 4.85
709 715 5.866335 TTTCATGATGAATTTTTGCAGGC 57.134 34.783 8.90 0.00 36.11 4.85
710 716 4.538746 TCATGATGAATTTTTGCAGGCA 57.461 36.364 0.00 0.00 0.00 4.75
711 717 4.247258 TCATGATGAATTTTTGCAGGCAC 58.753 39.130 0.00 0.00 0.00 5.01
712 718 4.020928 TCATGATGAATTTTTGCAGGCACT 60.021 37.500 0.00 0.00 43.88 4.40
713 719 4.339872 TGATGAATTTTTGCAGGCACTT 57.660 36.364 0.00 0.00 34.60 3.16
714 720 5.465532 TGATGAATTTTTGCAGGCACTTA 57.534 34.783 0.00 0.00 34.60 2.24
715 721 5.472148 TGATGAATTTTTGCAGGCACTTAG 58.528 37.500 0.00 0.00 34.60 2.18
716 722 5.243507 TGATGAATTTTTGCAGGCACTTAGA 59.756 36.000 0.00 0.00 34.60 2.10
717 723 5.528043 TGAATTTTTGCAGGCACTTAGAA 57.472 34.783 0.00 0.00 34.60 2.10
718 724 5.288804 TGAATTTTTGCAGGCACTTAGAAC 58.711 37.500 0.00 0.00 34.60 3.01
719 725 5.068987 TGAATTTTTGCAGGCACTTAGAACT 59.931 36.000 0.00 0.00 34.60 3.01
720 726 5.535753 ATTTTTGCAGGCACTTAGAACTT 57.464 34.783 0.00 0.00 34.60 2.66
721 727 5.337578 TTTTTGCAGGCACTTAGAACTTT 57.662 34.783 0.00 0.00 34.60 2.66
722 728 5.337578 TTTTGCAGGCACTTAGAACTTTT 57.662 34.783 0.00 0.00 34.60 2.27
723 729 3.988379 TGCAGGCACTTAGAACTTTTG 57.012 42.857 0.00 0.00 34.60 2.44
724 730 3.287222 TGCAGGCACTTAGAACTTTTGT 58.713 40.909 0.00 0.00 34.60 2.83
725 731 3.699038 TGCAGGCACTTAGAACTTTTGTT 59.301 39.130 0.00 0.00 41.41 2.83
726 732 4.884744 TGCAGGCACTTAGAACTTTTGTTA 59.115 37.500 0.00 0.00 39.14 2.41
727 733 5.358442 TGCAGGCACTTAGAACTTTTGTTAA 59.642 36.000 0.00 0.00 39.14 2.01
728 734 6.040391 TGCAGGCACTTAGAACTTTTGTTAAT 59.960 34.615 0.00 0.00 39.14 1.40
729 735 6.363357 GCAGGCACTTAGAACTTTTGTTAATG 59.637 38.462 0.00 0.00 39.14 1.90
730 736 7.425606 CAGGCACTTAGAACTTTTGTTAATGT 58.574 34.615 0.00 0.00 39.14 2.71
731 737 7.920682 CAGGCACTTAGAACTTTTGTTAATGTT 59.079 33.333 0.00 0.00 39.14 2.71
732 738 8.474831 AGGCACTTAGAACTTTTGTTAATGTTT 58.525 29.630 0.00 0.00 38.17 2.83
733 739 8.752254 GGCACTTAGAACTTTTGTTAATGTTTC 58.248 33.333 0.00 0.00 43.66 2.78
734 740 9.516314 GCACTTAGAACTTTTGTTAATGTTTCT 57.484 29.630 0.00 0.00 43.66 2.52
795 801 6.667981 TTTTTCGATTTTACTGTTCATGCG 57.332 33.333 0.00 0.00 0.00 4.73
796 802 4.335082 TTCGATTTTACTGTTCATGCGG 57.665 40.909 0.00 0.00 0.00 5.69
797 803 2.675844 TCGATTTTACTGTTCATGCGGG 59.324 45.455 0.00 0.00 0.00 6.13
798 804 2.675844 CGATTTTACTGTTCATGCGGGA 59.324 45.455 0.00 0.00 0.00 5.14
799 805 3.242413 CGATTTTACTGTTCATGCGGGAG 60.242 47.826 0.00 0.00 0.00 4.30
816 822 1.070445 AGCATATGAGCTCGGGTGC 59.930 57.895 22.13 22.13 42.18 5.01
817 823 1.227645 GCATATGAGCTCGGGTGCA 60.228 57.895 23.72 2.95 34.99 4.57
818 824 1.226686 GCATATGAGCTCGGGTGCAG 61.227 60.000 23.72 7.32 34.99 4.41
819 825 0.390492 CATATGAGCTCGGGTGCAGA 59.610 55.000 9.64 0.00 34.99 4.26
820 826 1.123077 ATATGAGCTCGGGTGCAGAA 58.877 50.000 9.64 0.00 34.99 3.02
821 827 1.123077 TATGAGCTCGGGTGCAGAAT 58.877 50.000 9.64 0.00 34.99 2.40
822 828 0.463295 ATGAGCTCGGGTGCAGAATG 60.463 55.000 9.64 0.00 40.87 2.67
823 829 1.817099 GAGCTCGGGTGCAGAATGG 60.817 63.158 0.00 0.00 35.86 3.16
824 830 2.244117 GAGCTCGGGTGCAGAATGGA 62.244 60.000 0.00 0.00 35.86 3.41
846 852 5.507315 GGACTTTTCGCTCTTGGATGAAAAA 60.507 40.000 1.34 0.00 39.15 1.94
855 861 4.138290 TCTTGGATGAAAAACTTGCGGTA 58.862 39.130 0.00 0.00 0.00 4.02
1015 1819 2.571757 GCATGGAGGTCGACGACA 59.428 61.111 27.77 9.26 33.68 4.35
1337 2181 8.956426 CCTGCTAGTACAAAAATCCTTCAAATA 58.044 33.333 0.00 0.00 0.00 1.40
1346 2198 5.803020 AAATCCTTCAAATACGAGCTGTC 57.197 39.130 0.00 0.00 0.00 3.51
1424 2279 4.026744 TGGGCGAATGATTGGGAATTTTA 58.973 39.130 0.00 0.00 0.00 1.52
1427 2282 5.043248 GGCGAATGATTGGGAATTTTAGTG 58.957 41.667 0.00 0.00 0.00 2.74
1497 2355 0.972471 AAAACTGCATAGGGGCTGCC 60.972 55.000 11.05 11.05 38.89 4.85
1604 2501 4.338400 TGTCTATGATACTCCGAACTGTGG 59.662 45.833 0.00 0.00 0.00 4.17
1605 2502 3.889538 TCTATGATACTCCGAACTGTGGG 59.110 47.826 0.00 0.00 0.00 4.61
1606 2503 1.191535 TGATACTCCGAACTGTGGGG 58.808 55.000 0.00 0.00 0.00 4.96
1607 2504 0.464452 GATACTCCGAACTGTGGGGG 59.536 60.000 0.00 0.00 0.00 5.40
1608 2505 1.623542 ATACTCCGAACTGTGGGGGC 61.624 60.000 0.00 0.00 0.00 5.80
1609 2506 2.741878 TACTCCGAACTGTGGGGGCT 62.742 60.000 0.00 0.00 0.00 5.19
1610 2507 3.612247 CTCCGAACTGTGGGGGCTG 62.612 68.421 0.00 0.00 0.00 4.85
1611 2508 4.722700 CCGAACTGTGGGGGCTGG 62.723 72.222 0.00 0.00 0.00 4.85
1615 2512 4.675303 ACTGTGGGGGCTGGCCTA 62.675 66.667 20.47 6.93 36.10 3.93
1616 2513 3.801997 CTGTGGGGGCTGGCCTAG 61.802 72.222 20.47 9.62 36.10 3.02
1672 2593 8.919145 AGTATTGTTTGTTGGGTATTTGAAGAA 58.081 29.630 0.00 0.00 0.00 2.52
1682 2603 4.122046 GGTATTTGAAGAATTGGGCATGC 58.878 43.478 9.90 9.90 0.00 4.06
1743 2672 1.200020 GCTAGCATTGTTGACCACCAC 59.800 52.381 10.63 0.00 0.00 4.16
1875 2806 2.610859 GGGTTCAGAGGGGAGGCA 60.611 66.667 0.00 0.00 0.00 4.75
1956 2890 0.905357 ATGGCTACAGGTCAGTCCAC 59.095 55.000 0.00 0.00 39.02 4.02
1957 2891 0.471022 TGGCTACAGGTCAGTCCACA 60.471 55.000 0.00 0.00 39.02 4.17
2049 2992 6.903534 TCAGAGTTTCTTATAGGGATGGAGTT 59.096 38.462 0.00 0.00 0.00 3.01
2160 3107 5.178061 TGCTCTATTGGATATGTATTGCGG 58.822 41.667 0.00 0.00 0.00 5.69
2238 3186 2.457366 AGCTCGTAGGAAAACACTGG 57.543 50.000 0.00 0.00 0.00 4.00
2264 3212 7.405292 AGAACTCCAATGATGACTATCCAAAA 58.595 34.615 0.00 0.00 32.09 2.44
2354 3429 7.617041 AATATAGCTGTCTTTTGTGAACTCC 57.383 36.000 0.00 0.00 0.00 3.85
2764 3865 4.080695 TCAGAGTAATCTGGCTGCATCTTT 60.081 41.667 19.36 0.00 38.23 2.52
2768 3869 5.259632 AGTAATCTGGCTGCATCTTTTTCT 58.740 37.500 0.50 0.00 0.00 2.52
2829 3939 9.476202 AGAATAATTTTGTAAGACCAACAAAGC 57.524 29.630 2.14 0.00 44.94 3.51
2832 3942 7.538303 AATTTTGTAAGACCAACAAAGCTTG 57.462 32.000 0.00 0.00 44.94 4.01
2881 3991 6.291377 ACTGTCATGTATTTTCTGTCAGTGT 58.709 36.000 0.00 0.00 37.70 3.55
3040 4152 2.967270 GCCTCAAGCATCCAAACCT 58.033 52.632 0.00 0.00 42.97 3.50
3189 4308 5.762045 AGAACAAACAATTCCAGTGATTCG 58.238 37.500 0.00 0.00 0.00 3.34
3315 4439 8.698973 TTCCAAACTCAGGTTATTCAATTGTA 57.301 30.769 5.13 0.00 34.90 2.41
3346 4475 5.253330 ACATAAACCCACAGATACTTGGTG 58.747 41.667 0.00 0.00 0.00 4.17
3360 4489 7.114811 CAGATACTTGGTGTTTTATTGTTGTGC 59.885 37.037 0.00 0.00 0.00 4.57
3521 4666 7.986085 ATACATAAACAGTTGCTGAAAGAGT 57.014 32.000 2.91 0.00 34.07 3.24
3532 4677 5.266733 TGCTGAAAGAGTTGCTGAAATTT 57.733 34.783 0.00 0.00 34.07 1.82
3537 4682 7.222611 GCTGAAAGAGTTGCTGAAATTTGTTTA 59.777 33.333 0.00 0.00 34.07 2.01
3671 4945 5.972935 ACAATGACACGTCTATGGTCAATA 58.027 37.500 9.39 0.00 43.93 1.90
3778 5058 3.309296 TGGGTTTCTACATTTGGCCAAA 58.691 40.909 32.12 32.12 34.46 3.28
3785 5065 6.849085 TTCTACATTTGGCCAAACACATAT 57.151 33.333 32.62 13.54 32.51 1.78
3788 5068 8.354711 TCTACATTTGGCCAAACACATATTTA 57.645 30.769 32.62 12.21 32.51 1.40
3789 5069 8.807118 TCTACATTTGGCCAAACACATATTTAA 58.193 29.630 32.62 6.81 32.51 1.52
3791 5071 8.093659 ACATTTGGCCAAACACATATTTAAAC 57.906 30.769 32.62 0.00 32.51 2.01
3792 5072 7.716998 ACATTTGGCCAAACACATATTTAAACA 59.283 29.630 32.62 5.37 32.51 2.83
3793 5073 8.562892 CATTTGGCCAAACACATATTTAAACAA 58.437 29.630 32.62 4.95 32.51 2.83
3794 5074 8.506168 TTTGGCCAAACACATATTTAAACAAA 57.494 26.923 27.13 0.00 0.00 2.83
3795 5075 7.484035 TGGCCAAACACATATTTAAACAAAC 57.516 32.000 0.61 0.00 0.00 2.93
3796 5076 7.275920 TGGCCAAACACATATTTAAACAAACT 58.724 30.769 0.61 0.00 0.00 2.66
3874 5170 7.415206 GCAATGTATTCTCTGGAATAAACGGTT 60.415 37.037 0.00 0.00 43.43 4.44
3976 5282 5.756833 TGCATGTGTGTTTTGCATTTTGATA 59.243 32.000 0.00 0.00 41.18 2.15
4244 5639 1.228063 CCTCCCCATCCAGCGAATG 60.228 63.158 0.00 0.00 0.00 2.67
4250 5645 1.878088 CCCATCCAGCGAATGATCTTG 59.122 52.381 0.00 0.00 0.00 3.02
4429 5826 8.216423 AGGTATGATCTTCATTAGCAACTTGAT 58.784 33.333 0.00 0.00 38.26 2.57
4516 5915 3.322211 TTTTCTGCATGCCCATCAAAG 57.678 42.857 16.68 3.71 0.00 2.77
4628 6033 3.555168 CGAGTGCTGGACCTTTTTCTACT 60.555 47.826 0.00 0.00 0.00 2.57
4676 6083 2.838202 TGAAGAAGGGGGTACAGTGATC 59.162 50.000 0.00 0.00 0.00 2.92
4683 6090 1.628846 GGGGTACAGTGATCCAGTGTT 59.371 52.381 12.00 0.00 44.43 3.32
5429 6840 9.853177 TCTATGCCTTATATCTCTTATCGATGA 57.147 33.333 8.54 0.00 0.00 2.92
5554 6965 2.742053 ACGACAAACAATATTGCTCGCT 59.258 40.909 15.48 5.44 37.35 4.93
5581 6992 4.825634 ACCATCATCAAACTGCTATCCATG 59.174 41.667 0.00 0.00 0.00 3.66
5582 6993 5.067954 CCATCATCAAACTGCTATCCATGA 58.932 41.667 0.00 0.00 0.00 3.07
5675 7183 0.835543 AGCTCAGTGAACCTGCTCCT 60.836 55.000 0.00 0.00 41.25 3.69
5681 7189 0.318762 GTGAACCTGCTCCTCTTCGT 59.681 55.000 0.00 0.00 0.00 3.85
5811 7326 6.693466 TGATCTTGTCGGTAATACAACAGAA 58.307 36.000 0.00 0.00 33.45 3.02
5843 7360 7.489574 TTTATTTTCCACCTGCATGTTTTTC 57.510 32.000 0.00 0.00 0.00 2.29
5895 7609 4.769688 TCATTTGATTCCTGTAGCATCGT 58.230 39.130 0.00 0.00 0.00 3.73
5908 7622 4.940654 TGTAGCATCGTTCCATTGATGAAA 59.059 37.500 6.40 0.00 43.68 2.69
5945 7659 5.105752 GCAGGTGAACACTGAGATACTAAG 58.894 45.833 4.96 0.00 38.20 2.18
6164 7914 2.875933 CAACGGCAAGTAGGTTTTCAGA 59.124 45.455 0.00 0.00 0.00 3.27
6631 8388 9.244799 TGAAGAACATATATGCTTAGTGTTACG 57.755 33.333 12.79 0.00 33.55 3.18
6710 8467 6.820152 CCAAGATGACATGACACTGAAATAGA 59.180 38.462 0.00 0.00 0.00 1.98
6711 8468 7.201591 CCAAGATGACATGACACTGAAATAGAC 60.202 40.741 0.00 0.00 0.00 2.59
6712 8469 6.939622 AGATGACATGACACTGAAATAGACA 58.060 36.000 0.00 0.00 0.00 3.41
6713 8470 7.040494 AGATGACATGACACTGAAATAGACAG 58.960 38.462 0.00 0.00 40.68 3.51
6823 9688 7.797038 TTCCATTACAGATGAAGATGACATG 57.203 36.000 0.00 0.00 0.00 3.21
6975 9840 2.861974 GGTTCCCTCCCAACCCCA 60.862 66.667 0.00 0.00 37.88 4.96
6978 9843 1.850755 TTCCCTCCCAACCCCACTC 60.851 63.158 0.00 0.00 0.00 3.51
6994 9863 2.749621 CCACTCCAGTTGTCCTTTATGC 59.250 50.000 0.00 0.00 0.00 3.14
6995 9864 2.749621 CACTCCAGTTGTCCTTTATGCC 59.250 50.000 0.00 0.00 0.00 4.40
7005 9945 2.162408 GTCCTTTATGCCACTGCTCAAC 59.838 50.000 0.00 0.00 38.71 3.18
7027 9967 2.202783 GCGCCACAATGCCCATTC 60.203 61.111 0.00 0.00 0.00 2.67
7038 9978 2.220653 TGCCCATTCCCTTTTCTCAG 57.779 50.000 0.00 0.00 0.00 3.35
7042 9982 3.879321 GCCCATTCCCTTTTCTCAGACAT 60.879 47.826 0.00 0.00 0.00 3.06
7047 9987 4.038271 TCCCTTTTCTCAGACATGCATT 57.962 40.909 0.00 0.00 0.00 3.56
7048 9988 3.760151 TCCCTTTTCTCAGACATGCATTG 59.240 43.478 0.00 0.00 0.00 2.82
7049 9989 3.760151 CCCTTTTCTCAGACATGCATTGA 59.240 43.478 0.00 0.00 0.00 2.57
7050 9990 4.380233 CCCTTTTCTCAGACATGCATTGAC 60.380 45.833 0.00 0.00 0.00 3.18
7051 9991 4.216902 CCTTTTCTCAGACATGCATTGACA 59.783 41.667 0.00 0.00 0.00 3.58
7052 9992 5.366829 TTTTCTCAGACATGCATTGACAG 57.633 39.130 0.00 0.00 0.00 3.51
7054 9994 3.332034 TCTCAGACATGCATTGACAGTG 58.668 45.455 0.00 0.00 0.00 3.66
7055 9995 3.072211 CTCAGACATGCATTGACAGTGT 58.928 45.455 0.00 0.00 0.00 3.55
7056 9996 2.809696 TCAGACATGCATTGACAGTGTG 59.190 45.455 0.00 0.21 0.00 3.82
7057 9997 2.551032 CAGACATGCATTGACAGTGTGT 59.449 45.455 0.00 0.00 0.00 3.72
7058 9998 3.004002 CAGACATGCATTGACAGTGTGTT 59.996 43.478 0.00 0.00 0.00 3.32
7059 9999 3.004002 AGACATGCATTGACAGTGTGTTG 59.996 43.478 0.00 0.00 0.00 3.33
7060 10000 2.055838 CATGCATTGACAGTGTGTTGC 58.944 47.619 0.00 7.60 33.53 4.17
7061 10001 1.391577 TGCATTGACAGTGTGTTGCT 58.608 45.000 17.62 0.00 33.93 3.91
7062 10002 1.065851 TGCATTGACAGTGTGTTGCTG 59.934 47.619 17.62 0.00 33.93 4.41
7073 10013 3.380320 AGTGTGTTGCTGAAAAGTTACCC 59.620 43.478 0.00 0.00 0.00 3.69
7166 10263 1.729517 CCACATTACACGCGACATTGA 59.270 47.619 15.93 0.00 0.00 2.57
7169 10266 3.306973 CACATTACACGCGACATTGATCT 59.693 43.478 15.93 0.00 0.00 2.75
7215 10329 6.237463 GCAGTCCAACTTTGTTTCGTAAAAAG 60.237 38.462 0.00 0.00 37.04 2.27
7236 10350 1.636148 AATGGCATGGCTTCAAGTGT 58.364 45.000 21.08 0.00 0.00 3.55
7237 10351 1.180029 ATGGCATGGCTTCAAGTGTC 58.820 50.000 21.08 0.00 0.00 3.67
7242 10357 1.955778 CATGGCTTCAAGTGTCACCAA 59.044 47.619 0.00 0.00 0.00 3.67
7249 10364 4.378874 GCTTCAAGTGTCACCAATAGAAGC 60.379 45.833 19.99 19.99 46.35 3.86
7262 10381 4.634004 CCAATAGAAGCGTGTGAAATACCA 59.366 41.667 0.00 0.00 0.00 3.25
7263 10382 5.447279 CCAATAGAAGCGTGTGAAATACCAC 60.447 44.000 0.00 0.00 37.55 4.16
7264 10383 3.120321 AGAAGCGTGTGAAATACCACA 57.880 42.857 0.00 0.00 43.98 4.17
7265 10384 3.067106 AGAAGCGTGTGAAATACCACAG 58.933 45.455 0.00 0.00 46.42 3.66
7266 10385 2.543777 AGCGTGTGAAATACCACAGT 57.456 45.000 0.00 0.00 46.42 3.55
7267 10386 3.671008 AGCGTGTGAAATACCACAGTA 57.329 42.857 0.00 0.00 46.42 2.74
7268 10387 3.323243 AGCGTGTGAAATACCACAGTAC 58.677 45.455 0.00 0.00 46.42 2.73
7269 10388 2.414138 GCGTGTGAAATACCACAGTACC 59.586 50.000 0.00 0.00 46.42 3.34
7318 10437 6.477053 ACACACTCTGATATTGAGCTGTAT 57.523 37.500 0.00 0.00 35.12 2.29
7319 10438 6.882656 ACACACTCTGATATTGAGCTGTATT 58.117 36.000 0.00 0.00 35.12 1.89
7381 10500 5.129634 ACAAGATCTTCGAGAGATGCTAGA 58.870 41.667 4.57 0.00 45.17 2.43
7382 10501 5.769662 ACAAGATCTTCGAGAGATGCTAGAT 59.230 40.000 4.57 3.73 45.17 1.98
7384 10503 3.913548 TCTTCGAGAGATGCTAGATGC 57.086 47.619 0.00 0.00 41.60 3.91
7386 10505 0.877743 TCGAGAGATGCTAGATGCCG 59.122 55.000 0.00 0.00 36.41 5.69
7484 10607 1.534595 GGACGGACGTGCGTACATAAT 60.535 52.381 35.76 13.13 0.00 1.28
7489 10612 1.591158 GACGTGCGTACATAATGGTGG 59.409 52.381 4.09 0.00 0.00 4.61
7497 10625 4.617298 GCGTACATAATGGTGGCACTTTTT 60.617 41.667 18.45 10.94 0.00 1.94
7624 10908 2.287788 CGCAATGCTGATATGTTTCCCC 60.288 50.000 2.94 0.00 0.00 4.81
7628 10912 5.068987 GCAATGCTGATATGTTTCCCCTAAA 59.931 40.000 0.00 0.00 0.00 1.85
7633 10917 7.582719 TGCTGATATGTTTCCCCTAAATAACT 58.417 34.615 0.00 0.00 0.00 2.24
7634 10918 8.058847 TGCTGATATGTTTCCCCTAAATAACTT 58.941 33.333 0.00 0.00 0.00 2.66
7635 10919 8.568794 GCTGATATGTTTCCCCTAAATAACTTC 58.431 37.037 0.00 0.00 0.00 3.01
7636 10920 9.853177 CTGATATGTTTCCCCTAAATAACTTCT 57.147 33.333 0.00 0.00 0.00 2.85
7701 10985 1.942657 CCATGCCCTCTTACAATGACG 59.057 52.381 0.00 0.00 0.00 4.35
7702 10986 2.419990 CCATGCCCTCTTACAATGACGA 60.420 50.000 0.00 0.00 0.00 4.20
7703 10987 3.270027 CATGCCCTCTTACAATGACGAA 58.730 45.455 0.00 0.00 0.00 3.85
7748 11048 7.295201 TCGAAAGATTCTACAAAATCAAACGG 58.705 34.615 0.00 0.00 37.98 4.44
7749 11049 7.171848 TCGAAAGATTCTACAAAATCAAACGGA 59.828 33.333 0.00 0.00 37.98 4.69
7758 11058 0.110486 AATCAAACGGAGGCTGGTGT 59.890 50.000 0.00 0.00 0.00 4.16
7761 11074 2.752807 AAACGGAGGCTGGTGTGGT 61.753 57.895 0.00 0.00 0.00 4.16
7805 11118 3.057174 ACAAACTTGAACTGGCGTTTTCA 60.057 39.130 0.00 0.00 32.39 2.69
7807 11120 4.385358 AACTTGAACTGGCGTTTTCAAT 57.615 36.364 8.01 0.00 40.16 2.57
7886 11199 2.443255 TGCAAGAAAAAGACTCCCTCCT 59.557 45.455 0.00 0.00 0.00 3.69
7887 11200 2.816672 GCAAGAAAAAGACTCCCTCCTG 59.183 50.000 0.00 0.00 0.00 3.86
7888 11201 3.748989 GCAAGAAAAAGACTCCCTCCTGT 60.749 47.826 0.00 0.00 0.00 4.00
7889 11202 4.505039 GCAAGAAAAAGACTCCCTCCTGTA 60.505 45.833 0.00 0.00 0.00 2.74
7958 11309 4.517934 CGCCCCGTCCTCCCTCTA 62.518 72.222 0.00 0.00 0.00 2.43
7982 11339 2.845970 TTACCCCATCCATATCCCCA 57.154 50.000 0.00 0.00 0.00 4.96
8024 11381 2.040884 CCCCTCTCCATCCCCGAA 60.041 66.667 0.00 0.00 0.00 4.30
8026 11383 1.383248 CCCTCTCCATCCCCGAACT 60.383 63.158 0.00 0.00 0.00 3.01
8031 11388 2.107141 CCATCCCCGAACTCTCGC 59.893 66.667 0.00 0.00 44.04 5.03
8171 11541 1.943730 GCTCCCTCTCCTCCTCCTCA 61.944 65.000 0.00 0.00 0.00 3.86
8230 11600 2.554636 CCAAGCGCAGGTGAGCAAA 61.555 57.895 11.47 0.00 43.47 3.68
8328 11703 3.373565 CTGGGGTTTTGGGCGCTC 61.374 66.667 7.64 2.47 0.00 5.03
8332 11707 3.431725 GGTTTTGGGCGCTCGAGG 61.432 66.667 15.58 5.53 0.00 4.63
8335 11710 1.527380 TTTTGGGCGCTCGAGGTTT 60.527 52.632 15.58 0.00 0.00 3.27
8336 11711 1.512156 TTTTGGGCGCTCGAGGTTTC 61.512 55.000 15.58 0.00 0.00 2.78
8350 11725 0.308684 GGTTTCGACGGGTTTGTTCC 59.691 55.000 0.00 0.00 0.00 3.62
8358 11733 3.368116 CGACGGGTTTGTTCCTAGATTCT 60.368 47.826 0.00 0.00 0.00 2.40
8366 11741 6.151817 GGTTTGTTCCTAGATTCTGAATTGCT 59.848 38.462 4.11 0.89 0.00 3.91
8367 11742 7.309438 GGTTTGTTCCTAGATTCTGAATTGCTT 60.309 37.037 4.11 0.00 0.00 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 66 2.515854 GGGGAGAAGGAAAAAGTGACC 58.484 52.381 0.00 0.00 0.00 4.02
66 68 2.038557 CTCGGGGAGAAGGAAAAAGTGA 59.961 50.000 0.00 0.00 0.00 3.41
161 165 2.158943 CCTCCACCTCGAAATCCCTAAC 60.159 54.545 0.00 0.00 0.00 2.34
172 176 3.382832 AGGCGAACCTCCACCTCG 61.383 66.667 0.00 0.00 46.34 4.63
238 244 1.004292 CGGTTAACAATTCCGGCGATC 60.004 52.381 9.30 0.00 40.49 3.69
254 260 0.807667 CTCTAAGCAGCGCATCGGTT 60.808 55.000 11.47 12.10 34.62 4.44
276 282 2.032681 GGCCACCACCTCAGTCAC 59.967 66.667 0.00 0.00 0.00 3.67
279 285 3.958860 GCTGGCCACCACCTCAGT 61.959 66.667 0.00 0.00 0.00 3.41
458 464 1.198178 GATTAGCCGCGTCCAAAACAA 59.802 47.619 4.92 0.00 0.00 2.83
462 468 1.366111 GCAGATTAGCCGCGTCCAAA 61.366 55.000 4.92 0.00 0.00 3.28
463 469 1.813753 GCAGATTAGCCGCGTCCAA 60.814 57.895 4.92 0.00 0.00 3.53
464 470 2.202878 GCAGATTAGCCGCGTCCA 60.203 61.111 4.92 0.00 0.00 4.02
465 471 2.202878 TGCAGATTAGCCGCGTCC 60.203 61.111 4.92 0.00 0.00 4.79
466 472 2.526120 GGTGCAGATTAGCCGCGTC 61.526 63.158 4.92 0.00 0.00 5.19
467 473 2.511600 GGTGCAGATTAGCCGCGT 60.512 61.111 4.92 0.00 0.00 6.01
468 474 3.272334 GGGTGCAGATTAGCCGCG 61.272 66.667 0.00 0.00 0.00 6.46
471 477 1.889573 GCTCGGGTGCAGATTAGCC 60.890 63.158 0.00 0.00 0.00 3.93
472 478 0.878086 GAGCTCGGGTGCAGATTAGC 60.878 60.000 0.00 0.00 34.99 3.09
473 479 0.461548 TGAGCTCGGGTGCAGATTAG 59.538 55.000 9.64 0.00 34.99 1.73
474 480 0.901827 TTGAGCTCGGGTGCAGATTA 59.098 50.000 9.64 0.00 34.99 1.75
475 481 0.036732 TTTGAGCTCGGGTGCAGATT 59.963 50.000 9.64 0.00 34.99 2.40
476 482 0.254178 ATTTGAGCTCGGGTGCAGAT 59.746 50.000 9.64 0.00 34.99 2.90
477 483 0.674581 CATTTGAGCTCGGGTGCAGA 60.675 55.000 9.64 0.00 34.99 4.26
478 484 0.674581 TCATTTGAGCTCGGGTGCAG 60.675 55.000 9.64 0.00 34.99 4.41
479 485 0.674581 CTCATTTGAGCTCGGGTGCA 60.675 55.000 9.64 0.00 35.13 4.57
480 486 2.093216 CTCATTTGAGCTCGGGTGC 58.907 57.895 9.64 0.00 35.13 5.01
489 495 1.734465 GTTCACCCGAGCTCATTTGAG 59.266 52.381 15.40 3.13 44.75 3.02
490 496 1.071542 TGTTCACCCGAGCTCATTTGA 59.928 47.619 15.40 9.18 0.00 2.69
491 497 1.466167 CTGTTCACCCGAGCTCATTTG 59.534 52.381 15.40 6.81 0.00 2.32
492 498 1.072331 ACTGTTCACCCGAGCTCATTT 59.928 47.619 15.40 0.00 0.00 2.32
493 499 0.687354 ACTGTTCACCCGAGCTCATT 59.313 50.000 15.40 0.00 0.00 2.57
494 500 1.557099 TACTGTTCACCCGAGCTCAT 58.443 50.000 15.40 0.00 0.00 2.90
495 501 1.334160 TTACTGTTCACCCGAGCTCA 58.666 50.000 15.40 0.00 0.00 4.26
496 502 2.450609 TTTACTGTTCACCCGAGCTC 57.549 50.000 2.73 2.73 0.00 4.09
497 503 2.922740 TTTTACTGTTCACCCGAGCT 57.077 45.000 0.00 0.00 0.00 4.09
498 504 2.093783 CGATTTTACTGTTCACCCGAGC 59.906 50.000 0.00 0.00 0.00 5.03
499 505 3.581755 TCGATTTTACTGTTCACCCGAG 58.418 45.455 0.00 0.00 0.00 4.63
500 506 3.663995 TCGATTTTACTGTTCACCCGA 57.336 42.857 0.00 0.00 0.00 5.14
501 507 4.735662 TTTCGATTTTACTGTTCACCCG 57.264 40.909 0.00 0.00 0.00 5.28
545 551 9.487790 AACTTTTGTCAATGTTTCTCTCAAAAA 57.512 25.926 0.00 0.00 34.51 1.94
553 559 9.463443 GCACTTATAACTTTTGTCAATGTTTCT 57.537 29.630 8.96 2.82 33.49 2.52
554 560 8.699749 GGCACTTATAACTTTTGTCAATGTTTC 58.300 33.333 8.96 0.00 33.49 2.78
555 561 8.421002 AGGCACTTATAACTTTTGTCAATGTTT 58.579 29.630 8.96 0.00 27.25 2.83
556 562 7.867403 CAGGCACTTATAACTTTTGTCAATGTT 59.133 33.333 8.76 8.76 34.60 2.71
557 563 7.370383 CAGGCACTTATAACTTTTGTCAATGT 58.630 34.615 0.00 0.00 34.60 2.71
558 564 6.308766 GCAGGCACTTATAACTTTTGTCAATG 59.691 38.462 0.00 0.00 34.60 2.82
559 565 6.015519 TGCAGGCACTTATAACTTTTGTCAAT 60.016 34.615 0.00 0.00 34.60 2.57
560 566 5.300539 TGCAGGCACTTATAACTTTTGTCAA 59.699 36.000 0.00 0.00 34.60 3.18
561 567 4.824537 TGCAGGCACTTATAACTTTTGTCA 59.175 37.500 0.00 0.00 34.60 3.58
562 568 5.371115 TGCAGGCACTTATAACTTTTGTC 57.629 39.130 0.00 0.00 34.60 3.18
563 569 5.782893 TTGCAGGCACTTATAACTTTTGT 57.217 34.783 0.00 0.00 34.60 2.83
564 570 7.475771 TTTTTGCAGGCACTTATAACTTTTG 57.524 32.000 0.00 0.00 34.60 2.44
590 596 9.268268 AGAGTACTATTTTTGTTTTCATGACGA 57.732 29.630 0.00 0.00 0.00 4.20
591 597 9.318041 CAGAGTACTATTTTTGTTTTCATGACG 57.682 33.333 0.00 0.00 0.00 4.35
606 612 9.998106 TGAAAGTAGCTTTTTCAGAGTACTATT 57.002 29.630 17.30 0.00 39.05 1.73
607 613 9.998106 TTGAAAGTAGCTTTTTCAGAGTACTAT 57.002 29.630 19.21 0.00 43.22 2.12
608 614 9.826574 TTTGAAAGTAGCTTTTTCAGAGTACTA 57.173 29.630 19.21 6.79 43.22 1.82
609 615 8.613482 GTTTGAAAGTAGCTTTTTCAGAGTACT 58.387 33.333 19.21 0.00 43.22 2.73
610 616 7.583040 CGTTTGAAAGTAGCTTTTTCAGAGTAC 59.417 37.037 19.21 15.67 43.22 2.73
611 617 7.627340 CGTTTGAAAGTAGCTTTTTCAGAGTA 58.373 34.615 19.21 8.08 43.22 2.59
612 618 6.487103 CGTTTGAAAGTAGCTTTTTCAGAGT 58.513 36.000 19.21 0.00 43.22 3.24
613 619 5.396654 GCGTTTGAAAGTAGCTTTTTCAGAG 59.603 40.000 19.21 16.17 43.22 3.35
614 620 5.163703 TGCGTTTGAAAGTAGCTTTTTCAGA 60.164 36.000 19.21 15.01 43.22 3.27
615 621 5.034152 TGCGTTTGAAAGTAGCTTTTTCAG 58.966 37.500 19.21 12.77 43.22 3.02
616 622 4.987832 TGCGTTTGAAAGTAGCTTTTTCA 58.012 34.783 17.30 17.30 41.40 2.69
617 623 6.510746 AATGCGTTTGAAAGTAGCTTTTTC 57.489 33.333 13.56 13.56 33.49 2.29
618 624 6.902224 AAATGCGTTTGAAAGTAGCTTTTT 57.098 29.167 2.32 0.00 33.49 1.94
619 625 6.902224 AAAATGCGTTTGAAAGTAGCTTTT 57.098 29.167 4.29 0.00 36.97 2.27
631 637 3.114809 TCAGTGCTTCAAAATGCGTTTG 58.885 40.909 4.29 5.51 46.86 2.93
632 638 3.435105 TCAGTGCTTCAAAATGCGTTT 57.565 38.095 0.00 0.00 0.00 3.60
633 639 3.435105 TTCAGTGCTTCAAAATGCGTT 57.565 38.095 0.00 0.00 0.00 4.84
634 640 3.648339 ATTCAGTGCTTCAAAATGCGT 57.352 38.095 0.00 0.00 0.00 5.24
635 641 4.209703 ACAAATTCAGTGCTTCAAAATGCG 59.790 37.500 0.00 0.00 0.00 4.73
636 642 5.662211 ACAAATTCAGTGCTTCAAAATGC 57.338 34.783 0.00 0.00 0.00 3.56
637 643 8.898983 AAAAACAAATTCAGTGCTTCAAAATG 57.101 26.923 0.00 0.00 0.00 2.32
672 678 8.217131 TCATCATGAAATCACATTCCTGTAAG 57.783 34.615 0.00 0.00 33.14 2.34
673 679 8.578448 TTCATCATGAAATCACATTCCTGTAA 57.422 30.769 0.00 0.00 32.71 2.41
674 680 8.756486 ATTCATCATGAAATCACATTCCTGTA 57.244 30.769 3.63 0.00 40.12 2.74
675 681 7.655521 ATTCATCATGAAATCACATTCCTGT 57.344 32.000 3.63 0.00 40.12 4.00
676 682 8.942338 AAATTCATCATGAAATCACATTCCTG 57.058 30.769 3.63 0.00 40.12 3.86
677 683 9.953565 AAAAATTCATCATGAAATCACATTCCT 57.046 25.926 3.63 0.00 40.12 3.36
678 684 9.982291 CAAAAATTCATCATGAAATCACATTCC 57.018 29.630 3.63 0.00 40.12 3.01
679 685 9.485591 GCAAAAATTCATCATGAAATCACATTC 57.514 29.630 3.63 0.00 40.12 2.67
680 686 9.004717 TGCAAAAATTCATCATGAAATCACATT 57.995 25.926 3.63 0.00 40.12 2.71
681 687 8.554835 TGCAAAAATTCATCATGAAATCACAT 57.445 26.923 3.63 0.00 40.12 3.21
682 688 7.118535 CCTGCAAAAATTCATCATGAAATCACA 59.881 33.333 3.63 0.00 40.12 3.58
683 689 7.461107 CCTGCAAAAATTCATCATGAAATCAC 58.539 34.615 3.63 0.00 40.12 3.06
684 690 6.092944 GCCTGCAAAAATTCATCATGAAATCA 59.907 34.615 3.63 0.00 40.12 2.57
685 691 6.092944 TGCCTGCAAAAATTCATCATGAAATC 59.907 34.615 3.63 0.00 40.12 2.17
686 692 5.941058 TGCCTGCAAAAATTCATCATGAAAT 59.059 32.000 3.63 0.00 40.12 2.17
687 693 5.179742 GTGCCTGCAAAAATTCATCATGAAA 59.820 36.000 3.63 0.00 40.12 2.69
688 694 4.691685 GTGCCTGCAAAAATTCATCATGAA 59.308 37.500 1.59 1.59 41.09 2.57
689 695 4.020928 AGTGCCTGCAAAAATTCATCATGA 60.021 37.500 0.00 0.00 0.00 3.07
690 696 4.250464 AGTGCCTGCAAAAATTCATCATG 58.750 39.130 0.00 0.00 0.00 3.07
691 697 4.546829 AGTGCCTGCAAAAATTCATCAT 57.453 36.364 0.00 0.00 0.00 2.45
692 698 4.339872 AAGTGCCTGCAAAAATTCATCA 57.660 36.364 0.00 0.00 0.00 3.07
693 699 5.713025 TCTAAGTGCCTGCAAAAATTCATC 58.287 37.500 0.00 0.00 0.00 2.92
694 700 5.726980 TCTAAGTGCCTGCAAAAATTCAT 57.273 34.783 0.00 0.00 0.00 2.57
695 701 5.068987 AGTTCTAAGTGCCTGCAAAAATTCA 59.931 36.000 0.00 0.00 0.00 2.57
696 702 5.532557 AGTTCTAAGTGCCTGCAAAAATTC 58.467 37.500 0.00 0.00 0.00 2.17
697 703 5.535753 AGTTCTAAGTGCCTGCAAAAATT 57.464 34.783 0.00 0.00 0.00 1.82
698 704 5.535753 AAGTTCTAAGTGCCTGCAAAAAT 57.464 34.783 0.00 0.00 0.00 1.82
699 705 5.337578 AAAGTTCTAAGTGCCTGCAAAAA 57.662 34.783 0.00 0.00 0.00 1.94
700 706 5.108517 CAAAAGTTCTAAGTGCCTGCAAAA 58.891 37.500 0.00 0.00 0.00 2.44
701 707 4.159506 ACAAAAGTTCTAAGTGCCTGCAAA 59.840 37.500 0.00 0.00 0.00 3.68
702 708 3.699038 ACAAAAGTTCTAAGTGCCTGCAA 59.301 39.130 0.00 0.00 0.00 4.08
703 709 3.287222 ACAAAAGTTCTAAGTGCCTGCA 58.713 40.909 0.00 0.00 0.00 4.41
704 710 3.990318 ACAAAAGTTCTAAGTGCCTGC 57.010 42.857 0.00 0.00 0.00 4.85
705 711 7.425606 ACATTAACAAAAGTTCTAAGTGCCTG 58.574 34.615 0.00 0.00 0.00 4.85
706 712 7.582667 ACATTAACAAAAGTTCTAAGTGCCT 57.417 32.000 0.00 0.00 0.00 4.75
707 713 8.642908 AAACATTAACAAAAGTTCTAAGTGCC 57.357 30.769 0.00 0.00 0.00 5.01
708 714 9.516314 AGAAACATTAACAAAAGTTCTAAGTGC 57.484 29.630 0.00 0.00 0.00 4.40
772 778 5.627367 CCGCATGAACAGTAAAATCGAAAAA 59.373 36.000 0.00 0.00 0.00 1.94
773 779 5.150683 CCGCATGAACAGTAAAATCGAAAA 58.849 37.500 0.00 0.00 0.00 2.29
774 780 4.378978 CCCGCATGAACAGTAAAATCGAAA 60.379 41.667 0.00 0.00 0.00 3.46
775 781 3.126171 CCCGCATGAACAGTAAAATCGAA 59.874 43.478 0.00 0.00 0.00 3.71
776 782 2.675844 CCCGCATGAACAGTAAAATCGA 59.324 45.455 0.00 0.00 0.00 3.59
777 783 2.675844 TCCCGCATGAACAGTAAAATCG 59.324 45.455 0.00 0.00 0.00 3.34
778 784 3.487544 GCTCCCGCATGAACAGTAAAATC 60.488 47.826 0.00 0.00 35.78 2.17
779 785 2.423538 GCTCCCGCATGAACAGTAAAAT 59.576 45.455 0.00 0.00 35.78 1.82
780 786 1.810151 GCTCCCGCATGAACAGTAAAA 59.190 47.619 0.00 0.00 35.78 1.52
781 787 1.271108 TGCTCCCGCATGAACAGTAAA 60.271 47.619 0.00 0.00 42.25 2.01
782 788 0.323302 TGCTCCCGCATGAACAGTAA 59.677 50.000 0.00 0.00 42.25 2.24
783 789 1.979262 TGCTCCCGCATGAACAGTA 59.021 52.632 0.00 0.00 42.25 2.74
784 790 2.749682 TGCTCCCGCATGAACAGT 59.250 55.556 0.00 0.00 42.25 3.55
799 805 1.226686 CTGCACCCGAGCTCATATGC 61.227 60.000 20.59 20.59 34.99 3.14
800 806 0.390492 TCTGCACCCGAGCTCATATG 59.610 55.000 15.40 9.02 34.99 1.78
801 807 1.123077 TTCTGCACCCGAGCTCATAT 58.877 50.000 15.40 0.00 34.99 1.78
802 808 1.123077 ATTCTGCACCCGAGCTCATA 58.877 50.000 15.40 0.00 34.99 2.15
803 809 0.463295 CATTCTGCACCCGAGCTCAT 60.463 55.000 15.40 0.00 34.99 2.90
804 810 1.078918 CATTCTGCACCCGAGCTCA 60.079 57.895 15.40 0.00 34.99 4.26
805 811 1.817099 CCATTCTGCACCCGAGCTC 60.817 63.158 2.73 2.73 34.99 4.09
806 812 2.270205 CCATTCTGCACCCGAGCT 59.730 61.111 0.00 0.00 34.99 4.09
807 813 2.109126 GTCCATTCTGCACCCGAGC 61.109 63.158 0.00 0.00 0.00 5.03
808 814 0.036010 AAGTCCATTCTGCACCCGAG 60.036 55.000 0.00 0.00 0.00 4.63
809 815 0.400213 AAAGTCCATTCTGCACCCGA 59.600 50.000 0.00 0.00 0.00 5.14
810 816 1.200020 GAAAAGTCCATTCTGCACCCG 59.800 52.381 0.00 0.00 0.00 5.28
811 817 1.200020 CGAAAAGTCCATTCTGCACCC 59.800 52.381 0.00 0.00 0.00 4.61
812 818 1.401539 GCGAAAAGTCCATTCTGCACC 60.402 52.381 0.00 0.00 0.00 5.01
813 819 1.537202 AGCGAAAAGTCCATTCTGCAC 59.463 47.619 0.00 0.00 32.58 4.57
814 820 1.806542 GAGCGAAAAGTCCATTCTGCA 59.193 47.619 0.00 0.00 32.58 4.41
815 821 2.079925 AGAGCGAAAAGTCCATTCTGC 58.920 47.619 0.00 0.00 0.00 4.26
816 822 3.120060 CCAAGAGCGAAAAGTCCATTCTG 60.120 47.826 0.00 0.00 0.00 3.02
817 823 3.077359 CCAAGAGCGAAAAGTCCATTCT 58.923 45.455 0.00 0.00 0.00 2.40
818 824 3.074412 TCCAAGAGCGAAAAGTCCATTC 58.926 45.455 0.00 0.00 0.00 2.67
819 825 3.140325 TCCAAGAGCGAAAAGTCCATT 57.860 42.857 0.00 0.00 0.00 3.16
820 826 2.859165 TCCAAGAGCGAAAAGTCCAT 57.141 45.000 0.00 0.00 0.00 3.41
821 827 2.038426 TCATCCAAGAGCGAAAAGTCCA 59.962 45.455 0.00 0.00 0.00 4.02
822 828 2.699954 TCATCCAAGAGCGAAAAGTCC 58.300 47.619 0.00 0.00 0.00 3.85
823 829 4.749245 TTTCATCCAAGAGCGAAAAGTC 57.251 40.909 0.00 0.00 0.00 3.01
824 830 5.067805 AGTTTTTCATCCAAGAGCGAAAAGT 59.932 36.000 0.00 0.00 38.27 2.66
825 831 5.523369 AGTTTTTCATCCAAGAGCGAAAAG 58.477 37.500 0.00 0.00 38.27 2.27
829 835 3.304659 GCAAGTTTTTCATCCAAGAGCGA 60.305 43.478 0.00 0.00 0.00 4.93
830 836 2.982470 GCAAGTTTTTCATCCAAGAGCG 59.018 45.455 0.00 0.00 0.00 5.03
846 852 9.609346 ACTTTTGTATTTATCTATACCGCAAGT 57.391 29.630 0.00 0.00 31.38 3.16
1320 2164 6.016276 ACAGCTCGTATTTGAAGGATTTTTGT 60.016 34.615 0.00 0.00 0.00 2.83
1346 2198 6.020984 TCGCAATCAACAGAAATTACGATTG 58.979 36.000 0.00 0.00 41.55 2.67
1353 2205 3.254166 ACAGCTCGCAATCAACAGAAATT 59.746 39.130 0.00 0.00 0.00 1.82
1424 2279 4.821805 CCAGTGTAGAAAATCACCAACACT 59.178 41.667 0.30 0.30 46.17 3.55
1427 2282 5.940470 AGATCCAGTGTAGAAAATCACCAAC 59.060 40.000 0.00 0.00 35.45 3.77
1535 2413 8.461222 CAATTAGCACTAACAATCTCAAATGGA 58.539 33.333 0.00 0.00 0.00 3.41
1612 2509 1.760875 TACCCTGAAGGCGCCTAGG 60.761 63.158 31.01 31.01 40.58 3.02
1613 2510 1.043673 AGTACCCTGAAGGCGCCTAG 61.044 60.000 33.07 24.45 40.58 3.02
1614 2511 0.259647 TAGTACCCTGAAGGCGCCTA 59.740 55.000 33.07 15.15 40.58 3.93
1615 2512 1.001248 TAGTACCCTGAAGGCGCCT 59.999 57.895 27.08 27.08 40.58 5.52
1616 2513 1.143401 GTAGTACCCTGAAGGCGCC 59.857 63.158 21.89 21.89 40.58 6.53
1617 2514 1.396653 TAGTAGTACCCTGAAGGCGC 58.603 55.000 0.00 0.00 40.58 6.53
1618 2515 5.008331 TCATATAGTAGTACCCTGAAGGCG 58.992 45.833 0.00 0.00 40.58 5.52
1619 2516 7.483580 AATCATATAGTAGTACCCTGAAGGC 57.516 40.000 0.00 0.00 40.58 4.35
1620 2517 9.529823 TGTAATCATATAGTAGTACCCTGAAGG 57.470 37.037 0.00 0.00 43.78 3.46
1653 2574 6.529220 CCCAATTCTTCAAATACCCAACAAA 58.471 36.000 0.00 0.00 0.00 2.83
1672 2593 5.145564 AGAAATATTCTGAGCATGCCCAAT 58.854 37.500 15.66 9.85 38.91 3.16
1743 2672 4.580580 AGGAAACCAAGTTAGCTGACAAAG 59.419 41.667 11.65 1.09 0.00 2.77
1875 2806 4.889409 CCAACATAAGTCATACTGGCCAAT 59.111 41.667 7.01 0.00 0.00 3.16
1956 2890 7.647907 AAGCAGAAAGATTTAATGTTGCTTG 57.352 32.000 10.37 1.62 45.66 4.01
2015 2958 7.365117 CCCTATAAGAAACTCTGACAGGACAAT 60.365 40.741 1.81 0.00 0.00 2.71
2049 2992 1.416401 GGCTTCGGGTCATTCTCCATA 59.584 52.381 0.00 0.00 0.00 2.74
2238 3186 6.166984 TGGATAGTCATCATTGGAGTTCTC 57.833 41.667 0.00 0.00 32.32 2.87
2354 3429 7.040409 AGGCAATGTTACCTTCTTAAAACTCAG 60.040 37.037 0.00 0.00 29.74 3.35
2371 3447 1.280421 GACAGAGGAGGAGGCAATGTT 59.720 52.381 0.00 0.00 0.00 2.71
2829 3939 4.157105 TCACAGTGGATGCATCATTTCAAG 59.843 41.667 27.25 13.77 0.00 3.02
2832 3942 4.913335 ATCACAGTGGATGCATCATTTC 57.087 40.909 27.25 11.05 0.00 2.17
3040 4152 9.288576 GGAAGATTGATGGACATGTATATGAAA 57.711 33.333 6.45 0.00 37.73 2.69
3179 4298 4.183865 TGCAAGATAGAACGAATCACTGG 58.816 43.478 0.00 0.00 0.00 4.00
3315 4439 5.347620 TCTGTGGGTTTATGTAAGCGTAT 57.652 39.130 0.00 0.00 35.05 3.06
3346 4475 5.527951 TGTGATGAGGCACAACAATAAAAC 58.472 37.500 0.00 0.00 45.08 2.43
3360 4489 3.562973 GCACCATATCAACTGTGATGAGG 59.437 47.826 0.00 4.14 44.49 3.86
3508 4653 3.698029 TTCAGCAACTCTTTCAGCAAC 57.302 42.857 0.00 0.00 0.00 4.17
3513 4658 9.598517 AATAAACAAATTTCAGCAACTCTTTCA 57.401 25.926 0.00 0.00 0.00 2.69
3519 4664 8.891671 ATGACAATAAACAAATTTCAGCAACT 57.108 26.923 0.00 0.00 0.00 3.16
3520 4665 9.934190 AAATGACAATAAACAAATTTCAGCAAC 57.066 25.926 0.00 0.00 0.00 4.17
3532 4677 9.883142 AAGTTTTTGAGGAAATGACAATAAACA 57.117 25.926 2.93 0.00 33.17 2.83
3537 4682 6.585416 AGCAAGTTTTTGAGGAAATGACAAT 58.415 32.000 0.00 0.00 36.36 2.71
3547 4692 3.885297 TCCAAGAGAGCAAGTTTTTGAGG 59.115 43.478 0.00 0.00 36.36 3.86
3622 4896 1.131638 ACAAGGTGAGGCTTGACTCA 58.868 50.000 1.44 1.44 44.74 3.41
3671 4945 4.070716 CTCTGAAGGAGCAAATGAACACT 58.929 43.478 0.00 0.00 35.08 3.55
3714 4988 7.333528 ACTGCACTTCTAAACATTCAAAGAA 57.666 32.000 0.00 0.00 0.00 2.52
3750 5030 3.434940 AATGTAGAAACCCAGGTGGAC 57.565 47.619 0.00 0.00 37.39 4.02
3794 5074 9.520204 GCATGTGTATAAATCTGCAAATTAAGT 57.480 29.630 0.00 0.00 0.00 2.24
3795 5075 8.971321 GGCATGTGTATAAATCTGCAAATTAAG 58.029 33.333 0.00 0.00 0.00 1.85
3796 5076 8.694540 AGGCATGTGTATAAATCTGCAAATTAA 58.305 29.630 0.00 0.00 0.00 1.40
3799 5079 6.097270 ACAGGCATGTGTATAAATCTGCAAAT 59.903 34.615 1.71 0.00 38.57 2.32
3802 5082 4.525996 ACAGGCATGTGTATAAATCTGCA 58.474 39.130 1.71 0.00 38.57 4.41
3803 5083 5.505173 AACAGGCATGTGTATAAATCTGC 57.495 39.130 4.03 0.00 40.39 4.26
3804 5084 5.745294 GCAAACAGGCATGTGTATAAATCTG 59.255 40.000 4.03 0.00 40.39 2.90
3805 5085 5.418524 TGCAAACAGGCATGTGTATAAATCT 59.581 36.000 4.03 0.00 40.39 2.40
3811 5106 4.309099 CTTTTGCAAACAGGCATGTGTAT 58.691 39.130 12.39 0.00 44.48 2.29
3874 5170 1.598882 TGCATGCCGTAAGTTGTTGA 58.401 45.000 16.68 0.00 0.00 3.18
3976 5282 6.389830 TCACTGATGTGTGCAAAAGTTTAT 57.610 33.333 0.00 0.00 44.14 1.40
3988 5294 2.816087 GGAACAAGCATCACTGATGTGT 59.184 45.455 18.36 13.29 44.14 3.72
4208 5601 1.112315 GGTGGTGGTTTCACATGGCA 61.112 55.000 0.00 0.00 45.32 4.92
4276 5673 6.375455 GGCTCACAGGAATCTTTTGAGATTTA 59.625 38.462 11.92 0.00 38.50 1.40
4429 5826 1.045407 ACAGGAAGTGGTGAACGCTA 58.955 50.000 0.00 0.00 39.50 4.26
4466 5865 3.550842 GGAGCACAAACAGATGACCAAAC 60.551 47.826 0.00 0.00 0.00 2.93
4516 5915 3.139077 AGGCAAACTACTTAGTGCACAC 58.861 45.455 21.04 0.00 36.50 3.82
4562 5967 4.700268 TTGTAGCATGTAAACAGCATGG 57.300 40.909 7.29 0.00 43.62 3.66
4604 6009 1.507141 AAAAAGGTCCAGCACTCGCG 61.507 55.000 0.00 0.00 45.49 5.87
4665 6070 3.963428 AGAACACTGGATCACTGTACC 57.037 47.619 0.00 0.00 0.00 3.34
5535 6946 4.091424 GTGAGCGAGCAATATTGTTTGTC 58.909 43.478 16.61 13.55 0.00 3.18
5554 6965 3.144657 AGCAGTTTGATGATGGTGTGA 57.855 42.857 0.00 0.00 0.00 3.58
5581 6992 6.151691 TCTTTGCTGCATCACAAGTTAAATC 58.848 36.000 1.84 0.00 0.00 2.17
5582 6993 6.088016 TCTTTGCTGCATCACAAGTTAAAT 57.912 33.333 1.84 0.00 0.00 1.40
5675 7183 2.595124 TTGTCAGCAACTCACGAAGA 57.405 45.000 0.00 0.00 0.00 2.87
5681 7189 0.953727 GTGCCATTGTCAGCAACTCA 59.046 50.000 0.00 0.00 41.48 3.41
5776 7284 4.058124 CCGACAAGATCAACAAAGACTCA 58.942 43.478 0.00 0.00 0.00 3.41
5822 7337 5.294734 AGAAAAACATGCAGGTGGAAAAT 57.705 34.783 4.03 0.00 0.00 1.82
5843 7360 6.401153 GCCGTAACACAAGAATCAAGAAGTAG 60.401 42.308 0.00 0.00 0.00 2.57
5908 7622 5.825679 TGTTCACCTGCAAACAAGTACTATT 59.174 36.000 0.00 0.00 32.69 1.73
5945 7659 8.838365 ACTCATTAATCATCTCAGCATTTTCTC 58.162 33.333 0.00 0.00 0.00 2.87
6136 7885 0.037326 CTACTTGCCGTTGCCTCAGA 60.037 55.000 0.00 0.00 36.33 3.27
6211 7962 5.890049 AGTTACTTCCGGATACCTAGCTAT 58.110 41.667 4.15 0.00 0.00 2.97
6212 7963 5.316158 AGTTACTTCCGGATACCTAGCTA 57.684 43.478 4.15 0.00 0.00 3.32
6338 8092 5.551760 AATCACTAAAAATCAGGACTGCG 57.448 39.130 0.00 0.00 0.00 5.18
6600 8357 8.727910 CACTAAGCATATATGTTCTTCATGCAT 58.272 33.333 14.14 0.00 43.46 3.96
6631 8388 3.005578 CGGATTCTGTTACCTACTAGGGC 59.994 52.174 7.06 0.00 40.58 5.19
6729 8486 7.225011 AGCTGGAGCATCATATATAATGGATG 58.775 38.462 13.79 13.79 45.16 3.51
6749 8506 9.941325 ATTAACTCTGAATGAATATCTAGCTGG 57.059 33.333 0.00 0.00 0.00 4.85
6823 9688 1.372087 CCGCAACCAGCTCTTGATCC 61.372 60.000 5.04 0.00 42.61 3.36
6975 9840 2.375174 TGGCATAAAGGACAACTGGAGT 59.625 45.455 0.00 0.00 0.00 3.85
6978 9843 2.489329 CAGTGGCATAAAGGACAACTGG 59.511 50.000 0.00 0.00 0.00 4.00
6994 9863 2.639286 GCCAACGTTGAGCAGTGG 59.361 61.111 29.35 12.86 0.00 4.00
6995 9864 2.249309 CGCCAACGTTGAGCAGTG 59.751 61.111 29.35 14.80 33.53 3.66
7027 9967 3.760151 TCAATGCATGTCTGAGAAAAGGG 59.240 43.478 0.00 0.00 0.00 3.95
7038 9978 3.302555 CAACACACTGTCAATGCATGTC 58.697 45.455 0.00 0.00 0.00 3.06
7042 9982 1.065851 CAGCAACACACTGTCAATGCA 59.934 47.619 11.12 0.00 34.91 3.96
7047 9987 3.081061 ACTTTTCAGCAACACACTGTCA 58.919 40.909 0.00 0.00 36.50 3.58
7048 9988 3.764885 ACTTTTCAGCAACACACTGTC 57.235 42.857 0.00 0.00 36.50 3.51
7049 9989 4.142469 GGTAACTTTTCAGCAACACACTGT 60.142 41.667 0.00 0.00 36.50 3.55
7050 9990 4.351192 GGTAACTTTTCAGCAACACACTG 58.649 43.478 0.00 0.00 36.44 3.66
7051 9991 3.380320 GGGTAACTTTTCAGCAACACACT 59.620 43.478 0.00 0.00 0.00 3.55
7052 9992 3.129638 TGGGTAACTTTTCAGCAACACAC 59.870 43.478 0.00 0.00 0.00 3.82
7054 9994 4.037446 TGATGGGTAACTTTTCAGCAACAC 59.963 41.667 0.00 0.00 0.00 3.32
7055 9995 4.211125 TGATGGGTAACTTTTCAGCAACA 58.789 39.130 0.00 0.00 0.00 3.33
7056 9996 4.846779 TGATGGGTAACTTTTCAGCAAC 57.153 40.909 0.00 0.00 0.00 4.17
7057 9997 7.232534 ACTTTATGATGGGTAACTTTTCAGCAA 59.767 33.333 0.00 0.00 0.00 3.91
7058 9998 6.719370 ACTTTATGATGGGTAACTTTTCAGCA 59.281 34.615 0.00 0.00 0.00 4.41
7059 9999 7.158099 ACTTTATGATGGGTAACTTTTCAGC 57.842 36.000 0.00 0.00 0.00 4.26
7060 10000 7.119262 ACGACTTTATGATGGGTAACTTTTCAG 59.881 37.037 0.00 0.00 0.00 3.02
7061 10001 6.938030 ACGACTTTATGATGGGTAACTTTTCA 59.062 34.615 0.00 0.00 0.00 2.69
7062 10002 7.373778 ACGACTTTATGATGGGTAACTTTTC 57.626 36.000 0.00 0.00 0.00 2.29
7166 10263 3.031736 ACGTTGGTATGCCTACTCAGAT 58.968 45.455 12.08 0.00 38.17 2.90
7169 10266 2.691526 CCTACGTTGGTATGCCTACTCA 59.308 50.000 12.08 0.00 38.17 3.41
7215 10329 2.028748 ACACTTGAAGCCATGCCATTTC 60.029 45.455 0.00 0.00 0.00 2.17
7236 10350 3.394674 TTCACACGCTTCTATTGGTGA 57.605 42.857 0.00 0.00 34.59 4.02
7237 10351 4.685169 ATTTCACACGCTTCTATTGGTG 57.315 40.909 0.00 0.00 36.50 4.17
7242 10357 4.827692 TGTGGTATTTCACACGCTTCTAT 58.172 39.130 0.00 0.00 42.05 1.98
7249 10364 3.921677 AGGTACTGTGGTATTTCACACG 58.078 45.455 0.00 0.00 42.05 4.49
7394 10513 2.032924 TCTACATATCGTGTGGCTGACG 59.967 50.000 2.93 2.93 42.24 4.35
7396 10515 3.551846 TCTCTACATATCGTGTGGCTGA 58.448 45.455 0.00 0.00 42.24 4.26
7398 10517 3.319405 CCTTCTCTACATATCGTGTGGCT 59.681 47.826 0.00 0.00 42.24 4.75
7400 10519 5.508153 CCTTCCTTCTCTACATATCGTGTGG 60.508 48.000 0.00 0.00 42.24 4.17
7402 10521 4.585162 CCCTTCCTTCTCTACATATCGTGT 59.415 45.833 0.00 0.00 44.95 4.49
7442 10565 3.243359 TCCCAGAAGGAACAAGCAAAT 57.757 42.857 0.00 0.00 43.78 2.32
7469 10592 1.591158 CCACCATTATGTACGCACGTC 59.409 52.381 0.00 0.00 0.00 4.34
7470 10593 1.647346 CCACCATTATGTACGCACGT 58.353 50.000 0.00 0.00 0.00 4.49
7471 10594 0.303493 GCCACCATTATGTACGCACG 59.697 55.000 0.00 0.00 0.00 5.34
7472 10595 1.063469 GTGCCACCATTATGTACGCAC 59.937 52.381 10.44 10.44 36.88 5.34
7505 10788 7.311364 TCTTCAAATATTTACAACGCTACCC 57.689 36.000 0.00 0.00 0.00 3.69
7646 10930 4.398358 GCACAGTTATTTAGGGGAAACTCC 59.602 45.833 0.00 0.00 35.23 3.85
7647 10931 5.123979 CAGCACAGTTATTTAGGGGAAACTC 59.876 44.000 0.00 0.00 29.93 3.01
7648 10932 5.010282 CAGCACAGTTATTTAGGGGAAACT 58.990 41.667 0.00 0.00 32.52 2.66
7649 10933 4.157840 CCAGCACAGTTATTTAGGGGAAAC 59.842 45.833 0.00 0.00 0.00 2.78
7650 10934 4.202631 ACCAGCACAGTTATTTAGGGGAAA 60.203 41.667 0.00 0.00 0.00 3.13
7651 10935 3.332485 ACCAGCACAGTTATTTAGGGGAA 59.668 43.478 0.00 0.00 0.00 3.97
7652 10936 2.916934 ACCAGCACAGTTATTTAGGGGA 59.083 45.455 0.00 0.00 0.00 4.81
7653 10937 3.366052 ACCAGCACAGTTATTTAGGGG 57.634 47.619 0.00 0.00 0.00 4.79
7654 10938 8.567948 CATATTTACCAGCACAGTTATTTAGGG 58.432 37.037 0.00 0.00 0.00 3.53
7655 10939 8.076178 GCATATTTACCAGCACAGTTATTTAGG 58.924 37.037 0.00 0.00 0.00 2.69
7656 10940 8.076178 GGCATATTTACCAGCACAGTTATTTAG 58.924 37.037 0.00 0.00 0.00 1.85
7657 10941 7.558081 TGGCATATTTACCAGCACAGTTATTTA 59.442 33.333 0.00 0.00 0.00 1.40
7658 10942 6.379703 TGGCATATTTACCAGCACAGTTATTT 59.620 34.615 0.00 0.00 0.00 1.40
7659 10943 5.890985 TGGCATATTTACCAGCACAGTTATT 59.109 36.000 0.00 0.00 0.00 1.40
7660 10944 5.445069 TGGCATATTTACCAGCACAGTTAT 58.555 37.500 0.00 0.00 0.00 1.89
7661 10945 4.849518 TGGCATATTTACCAGCACAGTTA 58.150 39.130 0.00 0.00 0.00 2.24
7662 10946 3.696045 TGGCATATTTACCAGCACAGTT 58.304 40.909 0.00 0.00 0.00 3.16
7663 10947 3.364460 TGGCATATTTACCAGCACAGT 57.636 42.857 0.00 0.00 0.00 3.55
7664 10948 3.551454 GCATGGCATATTTACCAGCACAG 60.551 47.826 0.00 0.00 39.88 3.66
7665 10949 2.361757 GCATGGCATATTTACCAGCACA 59.638 45.455 0.00 0.00 39.88 4.57
7701 10985 1.838568 AAAAAGACCGCGGCGACTTC 61.839 55.000 28.58 15.49 0.00 3.01
7702 10986 1.838568 GAAAAAGACCGCGGCGACTT 61.839 55.000 28.58 24.08 0.00 3.01
7703 10987 2.280592 AAAAAGACCGCGGCGACT 60.281 55.556 28.58 19.47 0.00 4.18
7748 11048 1.600916 GGTTGACCACACCAGCCTC 60.601 63.158 0.00 0.00 32.94 4.70
7749 11049 1.645402 AAGGTTGACCACACCAGCCT 61.645 55.000 2.56 0.00 45.34 4.58
7788 11101 5.717038 AAAATTGAAAACGCCAGTTCAAG 57.283 34.783 8.68 0.00 44.55 3.02
7844 11157 9.494271 CTTGCAGAATTTTAGTAGGAGCATATA 57.506 33.333 0.00 0.00 0.00 0.86
7845 11158 8.213679 TCTTGCAGAATTTTAGTAGGAGCATAT 58.786 33.333 0.00 0.00 0.00 1.78
7846 11159 7.564793 TCTTGCAGAATTTTAGTAGGAGCATA 58.435 34.615 0.00 0.00 0.00 3.14
7847 11160 6.418101 TCTTGCAGAATTTTAGTAGGAGCAT 58.582 36.000 0.00 0.00 0.00 3.79
7848 11161 5.804639 TCTTGCAGAATTTTAGTAGGAGCA 58.195 37.500 0.00 0.00 0.00 4.26
7849 11162 6.743575 TTCTTGCAGAATTTTAGTAGGAGC 57.256 37.500 0.00 0.00 0.00 4.70
7877 11190 2.952702 GCAGAGACATACAGGAGGGAGT 60.953 54.545 0.00 0.00 0.00 3.85
7886 11199 1.613317 CCCACCCGCAGAGACATACA 61.613 60.000 0.00 0.00 0.00 2.29
7887 11200 1.144057 CCCACCCGCAGAGACATAC 59.856 63.158 0.00 0.00 0.00 2.39
7888 11201 2.731571 GCCCACCCGCAGAGACATA 61.732 63.158 0.00 0.00 0.00 2.29
7889 11202 4.101448 GCCCACCCGCAGAGACAT 62.101 66.667 0.00 0.00 0.00 3.06
7958 11309 2.993863 GGATATGGATGGGGTAAAGGGT 59.006 50.000 0.00 0.00 0.00 4.34
8152 11522 1.152546 GAGGAGGAGGAGAGGGAGC 60.153 68.421 0.00 0.00 0.00 4.70
8153 11523 0.859760 ATGAGGAGGAGGAGAGGGAG 59.140 60.000 0.00 0.00 0.00 4.30
8154 11524 0.856982 GATGAGGAGGAGGAGAGGGA 59.143 60.000 0.00 0.00 0.00 4.20
8155 11525 0.178935 GGATGAGGAGGAGGAGAGGG 60.179 65.000 0.00 0.00 0.00 4.30
8156 11526 0.859760 AGGATGAGGAGGAGGAGAGG 59.140 60.000 0.00 0.00 0.00 3.69
8157 11527 1.545428 CGAGGATGAGGAGGAGGAGAG 60.545 61.905 0.00 0.00 0.00 3.20
8306 11681 2.604382 CCCAAAACCCCAGGCAGG 60.604 66.667 0.00 0.00 37.03 4.85
8307 11682 3.313524 GCCCAAAACCCCAGGCAG 61.314 66.667 0.00 0.00 45.07 4.85
8328 11703 0.877213 ACAAACCCGTCGAAACCTCG 60.877 55.000 0.00 0.00 46.87 4.63
8330 11705 1.302366 GAACAAACCCGTCGAAACCT 58.698 50.000 0.00 0.00 0.00 3.50
8332 11707 1.302366 AGGAACAAACCCGTCGAAAC 58.698 50.000 0.00 0.00 0.00 2.78
8335 11710 1.619654 TCTAGGAACAAACCCGTCGA 58.380 50.000 0.00 0.00 0.00 4.20
8336 11711 2.667473 ATCTAGGAACAAACCCGTCG 57.333 50.000 0.00 0.00 0.00 5.12
8337 11712 3.933332 CAGAATCTAGGAACAAACCCGTC 59.067 47.826 0.00 0.00 0.00 4.79
8338 11713 3.581332 TCAGAATCTAGGAACAAACCCGT 59.419 43.478 0.00 0.00 0.00 5.28
8339 11714 4.202245 TCAGAATCTAGGAACAAACCCG 57.798 45.455 0.00 0.00 0.00 5.28
8340 11715 6.625960 GCAATTCAGAATCTAGGAACAAACCC 60.626 42.308 0.00 0.00 0.00 4.11
8343 11718 7.596494 CAAGCAATTCAGAATCTAGGAACAAA 58.404 34.615 0.00 0.00 0.00 2.83
8350 11725 4.206698 CGGCAAGCAATTCAGAATCTAG 57.793 45.455 0.00 0.00 0.00 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.