Multiple sequence alignment - TraesCS3D01G506300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G506300 chr3D 100.000 3581 0 0 1 3581 593234721 593238301 0.000000e+00 6613.0
1 TraesCS3D01G506300 chr3D 81.944 288 37 9 9 286 565148429 565148711 2.780000e-56 230.0
2 TraesCS3D01G506300 chr3D 79.769 173 30 4 292 461 593246241 593246071 1.750000e-23 121.0
3 TraesCS3D01G506300 chr3B 94.682 2200 91 12 524 2702 795838971 795841165 0.000000e+00 3391.0
4 TraesCS3D01G506300 chr3B 94.286 105 6 0 2852 2956 795908977 795909081 1.030000e-35 161.0
5 TraesCS3D01G506300 chr3B 81.098 164 27 4 292 451 739325202 739325365 1.040000e-25 128.0
6 TraesCS3D01G506300 chr3B 92.424 66 3 1 2854 2917 795909141 795909206 3.810000e-15 93.5
7 TraesCS3D01G506300 chr3A 93.946 2164 92 16 463 2599 724514632 724516783 0.000000e+00 3234.0
8 TraesCS3D01G506300 chr3A 88.546 227 24 2 65 291 724512562 724512786 1.270000e-69 274.0
9 TraesCS3D01G506300 chr3A 88.546 227 24 2 65 291 724514416 724514640 1.270000e-69 274.0
10 TraesCS3D01G506300 chr3A 82.927 287 36 8 9 286 60206324 60206606 2.760000e-61 246.0
11 TraesCS3D01G506300 chr3A 87.678 211 24 2 65 275 724510721 724510929 9.930000e-61 244.0
12 TraesCS3D01G506300 chr3A 80.874 183 25 9 288 461 562912902 562912721 6.240000e-28 135.0
13 TraesCS3D01G506300 chr6B 92.967 583 34 5 3000 3581 579101694 579101118 0.000000e+00 843.0
14 TraesCS3D01G506300 chr6B 92.491 586 34 6 2998 3581 579098465 579099042 0.000000e+00 830.0
15 TraesCS3D01G506300 chr6B 76.438 730 124 34 1423 2137 704852629 704851933 5.690000e-93 351.0
16 TraesCS3D01G506300 chr5A 92.784 582 35 5 3001 3581 653926769 653927344 0.000000e+00 835.0
17 TraesCS3D01G506300 chr5A 74.635 1368 289 46 1056 2398 613700304 613701638 5.230000e-153 551.0
18 TraesCS3D01G506300 chr5A 96.166 313 10 2 3001 3312 653928758 653928447 8.870000e-141 510.0
19 TraesCS3D01G506300 chr5A 82.578 287 37 8 9 286 618878562 618878280 1.280000e-59 241.0
20 TraesCS3D01G506300 chr1B 92.612 582 35 6 3001 3581 589768786 589768212 0.000000e+00 830.0
21 TraesCS3D01G506300 chr5D 76.830 997 192 31 1417 2398 491527755 491528727 3.170000e-145 525.0
22 TraesCS3D01G506300 chr5D 86.826 167 9 3 308 461 249257912 249258078 1.320000e-39 174.0
23 TraesCS3D01G506300 chr5B 76.803 957 183 31 1457 2398 606301666 606302598 5.340000e-138 501.0
24 TraesCS3D01G506300 chr5B 88.785 107 12 0 355 461 282045910 282046016 8.070000e-27 132.0
25 TraesCS3D01G506300 chr5B 83.824 136 16 1 295 424 375380148 375380013 1.350000e-24 124.0
26 TraesCS3D01G506300 chr4B 75.796 1037 207 39 1431 2448 11657214 11656203 5.380000e-133 484.0
27 TraesCS3D01G506300 chr4B 78.723 188 29 9 289 466 612876128 612876314 8.120000e-22 115.0
28 TraesCS3D01G506300 chr4B 97.059 34 1 0 2934 2967 594837558 594837525 1.390000e-04 58.4
29 TraesCS3D01G506300 chr4A 75.642 1051 212 39 1417 2448 597014700 597015725 1.930000e-132 483.0
30 TraesCS3D01G506300 chr4D 76.008 992 198 33 1475 2449 6424484 6425452 8.990000e-131 477.0
31 TraesCS3D01G506300 chr4D 97.059 34 1 0 2934 2967 472479998 472479965 1.390000e-04 58.4
32 TraesCS3D01G506300 chr6D 76.529 703 123 27 1423 2113 452077630 452078302 2.650000e-91 346.0
33 TraesCS3D01G506300 chr6D 75.940 665 120 25 1423 2076 462405283 462405918 4.490000e-79 305.0
34 TraesCS3D01G506300 chr6D 82.155 297 36 9 1 286 78700299 78700589 4.620000e-59 239.0
35 TraesCS3D01G506300 chr6D 91.034 145 12 1 3008 3152 458169008 458169151 1.010000e-45 195.0
36 TraesCS3D01G506300 chr6D 91.034 145 12 1 3008 3152 458198484 458198627 1.010000e-45 195.0
37 TraesCS3D01G506300 chr6D 91.034 145 11 2 3008 3152 458221996 458222138 1.010000e-45 195.0
38 TraesCS3D01G506300 chr6D 94.048 84 5 0 3205 3288 458222138 458222221 1.040000e-25 128.0
39 TraesCS3D01G506300 chr6D 92.857 84 6 0 3205 3288 458143218 458143301 4.860000e-24 122.0
40 TraesCS3D01G506300 chr6A 76.278 704 123 28 1423 2113 609157826 609158498 5.730000e-88 335.0
41 TraesCS3D01G506300 chr6A 81.560 141 17 6 291 423 613266624 613266763 1.360000e-19 108.0
42 TraesCS3D01G506300 chr2A 83.275 287 35 8 9 286 538897975 538898257 5.930000e-63 252.0
43 TraesCS3D01G506300 chr7A 82.699 289 34 8 9 286 547146380 547146663 3.570000e-60 243.0
44 TraesCS3D01G506300 chrUn 91.034 145 12 1 3008 3152 362323965 362324108 1.010000e-45 195.0
45 TraesCS3D01G506300 chr2B 83.251 203 20 10 282 471 787527226 787527025 1.320000e-39 174.0
46 TraesCS3D01G506300 chr2D 83.636 165 23 3 301 461 590937838 590938002 6.190000e-33 152.0
47 TraesCS3D01G506300 chr2D 92.045 88 4 3 290 375 451292394 451292480 1.750000e-23 121.0
48 TraesCS3D01G506300 chr1A 86.047 129 9 8 295 416 451620575 451620449 2.900000e-26 130.0
49 TraesCS3D01G506300 chr1D 71.042 518 130 16 1687 2197 443818678 443819182 1.360000e-19 108.0
50 TraesCS3D01G506300 chr7D 83.333 66 9 2 2934 2998 78410396 78410332 3.860000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G506300 chr3D 593234721 593238301 3580 False 6613.0 6613 100.000 1 3581 1 chr3D.!!$F2 3580
1 TraesCS3D01G506300 chr3B 795838971 795841165 2194 False 3391.0 3391 94.682 524 2702 1 chr3B.!!$F2 2178
2 TraesCS3D01G506300 chr3A 724510721 724516783 6062 False 1006.5 3234 89.679 65 2599 4 chr3A.!!$F2 2534
3 TraesCS3D01G506300 chr6B 579101118 579101694 576 True 843.0 843 92.967 3000 3581 1 chr6B.!!$R1 581
4 TraesCS3D01G506300 chr6B 579098465 579099042 577 False 830.0 830 92.491 2998 3581 1 chr6B.!!$F1 583
5 TraesCS3D01G506300 chr6B 704851933 704852629 696 True 351.0 351 76.438 1423 2137 1 chr6B.!!$R2 714
6 TraesCS3D01G506300 chr5A 653926769 653927344 575 False 835.0 835 92.784 3001 3581 1 chr5A.!!$F2 580
7 TraesCS3D01G506300 chr5A 613700304 613701638 1334 False 551.0 551 74.635 1056 2398 1 chr5A.!!$F1 1342
8 TraesCS3D01G506300 chr1B 589768212 589768786 574 True 830.0 830 92.612 3001 3581 1 chr1B.!!$R1 580
9 TraesCS3D01G506300 chr5D 491527755 491528727 972 False 525.0 525 76.830 1417 2398 1 chr5D.!!$F2 981
10 TraesCS3D01G506300 chr5B 606301666 606302598 932 False 501.0 501 76.803 1457 2398 1 chr5B.!!$F2 941
11 TraesCS3D01G506300 chr4B 11656203 11657214 1011 True 484.0 484 75.796 1431 2448 1 chr4B.!!$R1 1017
12 TraesCS3D01G506300 chr4A 597014700 597015725 1025 False 483.0 483 75.642 1417 2448 1 chr4A.!!$F1 1031
13 TraesCS3D01G506300 chr4D 6424484 6425452 968 False 477.0 477 76.008 1475 2449 1 chr4D.!!$F1 974
14 TraesCS3D01G506300 chr6D 452077630 452078302 672 False 346.0 346 76.529 1423 2113 1 chr6D.!!$F2 690
15 TraesCS3D01G506300 chr6D 462405283 462405918 635 False 305.0 305 75.940 1423 2076 1 chr6D.!!$F6 653
16 TraesCS3D01G506300 chr6A 609157826 609158498 672 False 335.0 335 76.278 1423 2113 1 chr6A.!!$F1 690

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
34 35 0.035739 TACTTTGGTGGCCGAAGACC 59.964 55.0 18.99 8.7 45.4 3.85 F
801 4327 0.108662 CTCCATTTGCTTTTCCCGGC 60.109 55.0 0.00 0.0 0.0 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1385 4939 1.649664 ACAGATCAGATCAGTTGCGC 58.350 50.0 13.14 0.0 0.00 6.09 R
2714 6314 0.179137 CGCGGTTAGATGCTGACTGA 60.179 55.0 0.00 0.0 29.32 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.360350 TTGCCTGCTGCTGGCTAC 60.360 61.111 38.41 19.48 46.43 3.58
18 19 2.898933 TTGCCTGCTGCTGGCTACT 61.899 57.895 38.41 0.00 46.43 2.57
19 20 2.045536 GCCTGCTGCTGGCTACTT 60.046 61.111 34.54 0.00 43.62 2.24
20 21 1.676967 GCCTGCTGCTGGCTACTTT 60.677 57.895 34.54 0.00 43.62 2.66
21 22 1.930908 GCCTGCTGCTGGCTACTTTG 61.931 60.000 34.54 6.98 43.62 2.77
22 23 1.310933 CCTGCTGCTGGCTACTTTGG 61.311 60.000 12.79 0.00 42.39 3.28
23 24 0.607489 CTGCTGCTGGCTACTTTGGT 60.607 55.000 0.00 0.00 42.39 3.67
24 25 0.890542 TGCTGCTGGCTACTTTGGTG 60.891 55.000 0.00 0.00 42.39 4.17
25 26 1.589716 GCTGCTGGCTACTTTGGTGG 61.590 60.000 0.00 0.00 38.06 4.61
26 27 1.589716 CTGCTGGCTACTTTGGTGGC 61.590 60.000 0.00 0.00 46.98 5.01
30 31 4.390048 GCTACTTTGGTGGCCGAA 57.610 55.556 0.00 0.00 42.88 4.30
32 33 0.321298 GCTACTTTGGTGGCCGAAGA 60.321 55.000 18.99 5.15 45.40 2.87
33 34 1.439679 CTACTTTGGTGGCCGAAGAC 58.560 55.000 18.99 0.00 45.40 3.01
34 35 0.035739 TACTTTGGTGGCCGAAGACC 59.964 55.000 18.99 8.70 45.40 3.85
35 36 1.073199 CTTTGGTGGCCGAAGACCT 59.927 57.895 11.06 0.00 45.40 3.85
36 37 0.955919 CTTTGGTGGCCGAAGACCTC 60.956 60.000 11.06 0.00 45.40 3.85
59 60 5.837586 GATGGATCGATCAAGCTTAGTTC 57.162 43.478 25.93 4.74 0.00 3.01
60 61 5.537188 GATGGATCGATCAAGCTTAGTTCT 58.463 41.667 25.93 0.00 0.00 3.01
61 62 5.344743 TGGATCGATCAAGCTTAGTTCTT 57.655 39.130 25.93 0.00 0.00 2.52
62 63 5.352284 TGGATCGATCAAGCTTAGTTCTTC 58.648 41.667 25.93 4.84 0.00 2.87
63 64 5.105351 TGGATCGATCAAGCTTAGTTCTTCA 60.105 40.000 25.93 7.35 0.00 3.02
87 88 4.614535 GCTTCATCTTGGTAGTTGCTTGTG 60.615 45.833 0.00 0.00 0.00 3.33
89 90 5.222079 TCATCTTGGTAGTTGCTTGTGTA 57.778 39.130 0.00 0.00 0.00 2.90
95 96 5.794726 TGGTAGTTGCTTGTGTAGTCTTA 57.205 39.130 0.00 0.00 0.00 2.10
135 1976 0.390603 TTGCACCTTGTATCGACCGG 60.391 55.000 0.00 0.00 0.00 5.28
145 1986 0.821517 TATCGACCGGCTGATGTTGT 59.178 50.000 16.96 0.00 0.00 3.32
151 1992 1.238439 CCGGCTGATGTTGTGTCTTT 58.762 50.000 0.00 0.00 0.00 2.52
158 1999 5.452777 GCTGATGTTGTGTCTTTCTTTACC 58.547 41.667 0.00 0.00 0.00 2.85
159 2000 5.008613 GCTGATGTTGTGTCTTTCTTTACCA 59.991 40.000 0.00 0.00 0.00 3.25
187 2028 5.843673 TTTTCATGTTGCTTGTAAGTGGA 57.156 34.783 0.00 0.00 0.00 4.02
188 2029 6.403866 TTTTCATGTTGCTTGTAAGTGGAT 57.596 33.333 0.00 0.00 0.00 3.41
190 2031 3.758023 TCATGTTGCTTGTAAGTGGATGG 59.242 43.478 0.00 0.00 0.00 3.51
206 2047 2.368875 GGATGGTCGATGTAATCCTGGT 59.631 50.000 9.94 0.00 41.39 4.00
208 2049 2.462723 TGGTCGATGTAATCCTGGTCA 58.537 47.619 0.00 0.00 41.39 4.02
213 2054 4.273480 GTCGATGTAATCCTGGTCAATTGG 59.727 45.833 5.42 0.00 41.39 3.16
229 2070 6.223120 GTCAATTGGTGGCTTTGTTAAATCT 58.777 36.000 5.42 0.00 0.00 2.40
235 2076 5.180492 TGGTGGCTTTGTTAAATCTAAGTCG 59.820 40.000 0.00 0.00 30.13 4.18
238 2079 5.410439 TGGCTTTGTTAAATCTAAGTCGGAC 59.590 40.000 0.00 0.00 30.13 4.79
239 2080 5.410439 GGCTTTGTTAAATCTAAGTCGGACA 59.590 40.000 11.27 0.00 0.00 4.02
245 2086 6.993902 TGTTAAATCTAAGTCGGACAAGGTTT 59.006 34.615 19.24 19.24 0.00 3.27
246 2087 5.941948 AAATCTAAGTCGGACAAGGTTTG 57.058 39.130 16.34 3.10 0.00 2.93
249 2090 1.594331 AAGTCGGACAAGGTTTGAGC 58.406 50.000 11.27 0.00 0.00 4.26
253 2094 0.875059 CGGACAAGGTTTGAGCCTTC 59.125 55.000 0.00 0.00 46.33 3.46
292 2133 7.361286 CCGATGTCTTTTCTCTAAAAGGAAAGG 60.361 40.741 9.93 0.00 46.73 3.11
293 2134 7.361286 CGATGTCTTTTCTCTAAAAGGAAAGGG 60.361 40.741 9.93 0.00 46.73 3.95
294 2135 6.669631 TGTCTTTTCTCTAAAAGGAAAGGGT 58.330 36.000 9.93 0.00 46.73 4.34
295 2136 6.546034 TGTCTTTTCTCTAAAAGGAAAGGGTG 59.454 38.462 9.93 0.00 46.73 4.61
296 2137 6.546403 GTCTTTTCTCTAAAAGGAAAGGGTGT 59.454 38.462 9.93 0.00 46.73 4.16
298 2139 5.640158 TTCTCTAAAAGGAAAGGGTGTGA 57.360 39.130 0.00 0.00 0.00 3.58
299 2140 4.969484 TCTCTAAAAGGAAAGGGTGTGAC 58.031 43.478 0.00 0.00 0.00 3.67
300 2141 4.658901 TCTCTAAAAGGAAAGGGTGTGACT 59.341 41.667 0.00 0.00 0.00 3.41
302 2143 6.014499 TCTCTAAAAGGAAAGGGTGTGACTAG 60.014 42.308 0.00 0.00 0.00 2.57
303 2144 3.790089 AAAGGAAAGGGTGTGACTAGG 57.210 47.619 0.00 0.00 0.00 3.02
304 2145 2.417719 AGGAAAGGGTGTGACTAGGT 57.582 50.000 0.00 0.00 0.00 3.08
305 2146 2.258109 AGGAAAGGGTGTGACTAGGTC 58.742 52.381 0.00 0.00 0.00 3.85
306 2147 2.158143 AGGAAAGGGTGTGACTAGGTCT 60.158 50.000 0.00 0.00 33.15 3.85
307 2148 2.234168 GGAAAGGGTGTGACTAGGTCTC 59.766 54.545 0.00 0.00 33.15 3.36
309 2150 2.223803 AGGGTGTGACTAGGTCTCAG 57.776 55.000 0.00 0.00 36.86 3.35
310 2151 1.429687 AGGGTGTGACTAGGTCTCAGT 59.570 52.381 0.00 0.00 36.86 3.41
311 2152 1.819903 GGGTGTGACTAGGTCTCAGTC 59.180 57.143 0.00 0.00 42.31 3.51
313 2154 2.424557 GTGTGACTAGGTCTCAGTCGA 58.575 52.381 0.00 0.00 44.44 4.20
314 2155 2.160022 GTGTGACTAGGTCTCAGTCGAC 59.840 54.545 7.70 7.70 44.44 4.20
315 2156 2.038689 TGTGACTAGGTCTCAGTCGACT 59.961 50.000 13.58 13.58 44.44 4.18
316 2157 2.417239 GTGACTAGGTCTCAGTCGACTG 59.583 54.545 34.76 34.76 44.44 3.51
330 2171 5.230942 CAGTCGACTGAGATTTAACCAAGT 58.769 41.667 36.73 0.00 46.59 3.16
331 2172 5.346281 CAGTCGACTGAGATTTAACCAAGTC 59.654 44.000 36.73 0.00 46.59 3.01
333 2174 5.573669 GTCGACTGAGATTTAACCAAGTCTC 59.426 44.000 8.70 3.67 44.01 3.36
334 2175 4.559251 CGACTGAGATTTAACCAAGTCTCG 59.441 45.833 5.71 4.03 45.70 4.04
336 2177 4.822026 CTGAGATTTAACCAAGTCTCGGT 58.178 43.478 9.41 0.00 45.70 4.69
337 2178 4.817517 TGAGATTTAACCAAGTCTCGGTC 58.182 43.478 5.71 0.00 45.70 4.79
338 2179 4.282449 TGAGATTTAACCAAGTCTCGGTCA 59.718 41.667 5.71 0.00 45.70 4.02
340 2181 5.238583 AGATTTAACCAAGTCTCGGTCAAG 58.761 41.667 0.00 0.00 34.99 3.02
343 2184 1.410004 ACCAAGTCTCGGTCAAGTGA 58.590 50.000 0.00 0.00 27.30 3.41
344 2185 1.068741 ACCAAGTCTCGGTCAAGTGAC 59.931 52.381 2.69 2.69 44.04 3.67
345 2186 1.068588 CCAAGTCTCGGTCAAGTGACA 59.931 52.381 13.21 0.00 46.47 3.58
346 2187 2.289072 CCAAGTCTCGGTCAAGTGACAT 60.289 50.000 13.21 0.00 46.47 3.06
349 2190 4.175787 AGTCTCGGTCAAGTGACATAAC 57.824 45.455 13.21 5.79 46.47 1.89
353 2194 3.000041 TCGGTCAAGTGACATAACATGC 59.000 45.455 13.21 0.00 46.47 4.06
354 2195 2.741517 CGGTCAAGTGACATAACATGCA 59.258 45.455 13.21 0.00 46.47 3.96
355 2196 3.188254 CGGTCAAGTGACATAACATGCAA 59.812 43.478 13.21 0.00 46.47 4.08
357 2198 5.527951 GGTCAAGTGACATAACATGCAAAA 58.472 37.500 13.21 0.00 46.47 2.44
358 2199 5.982516 GGTCAAGTGACATAACATGCAAAAA 59.017 36.000 13.21 0.00 46.47 1.94
398 2239 8.942338 TTTACACGAATCTTAATGTAGCATCT 57.058 30.769 0.00 0.00 0.00 2.90
399 2240 8.575565 TTACACGAATCTTAATGTAGCATCTC 57.424 34.615 0.00 0.00 0.00 2.75
400 2241 6.573434 ACACGAATCTTAATGTAGCATCTCA 58.427 36.000 0.00 0.00 0.00 3.27
401 2242 6.477033 ACACGAATCTTAATGTAGCATCTCAC 59.523 38.462 0.00 0.00 0.00 3.51
402 2243 6.476706 CACGAATCTTAATGTAGCATCTCACA 59.523 38.462 0.00 0.00 0.00 3.58
403 2244 6.699204 ACGAATCTTAATGTAGCATCTCACAG 59.301 38.462 0.00 0.00 0.00 3.66
406 2247 9.920133 GAATCTTAATGTAGCATCTCACAGATA 57.080 33.333 0.00 0.00 32.12 1.98
410 2251 9.299963 CTTAATGTAGCATCTCACAGATATAGC 57.700 37.037 0.00 0.00 32.12 2.97
411 2252 6.847421 ATGTAGCATCTCACAGATATAGCA 57.153 37.500 0.00 0.00 32.12 3.49
413 2254 6.861144 TGTAGCATCTCACAGATATAGCATC 58.139 40.000 0.00 0.00 32.12 3.91
414 2255 4.996344 AGCATCTCACAGATATAGCATCG 58.004 43.478 0.00 0.00 32.12 3.84
415 2256 4.704057 AGCATCTCACAGATATAGCATCGA 59.296 41.667 0.00 0.00 32.12 3.59
416 2257 4.797868 GCATCTCACAGATATAGCATCGAC 59.202 45.833 0.00 0.00 32.12 4.20
417 2258 5.392919 GCATCTCACAGATATAGCATCGACT 60.393 44.000 0.00 0.00 32.12 4.18
418 2259 5.619625 TCTCACAGATATAGCATCGACTG 57.380 43.478 0.00 0.00 0.00 3.51
419 2260 5.308825 TCTCACAGATATAGCATCGACTGA 58.691 41.667 0.00 0.00 0.00 3.41
421 2262 5.308825 TCACAGATATAGCATCGACTGAGA 58.691 41.667 0.00 0.00 0.00 3.27
422 2263 5.180304 TCACAGATATAGCATCGACTGAGAC 59.820 44.000 0.00 0.00 0.00 3.36
423 2264 5.181056 CACAGATATAGCATCGACTGAGACT 59.819 44.000 0.00 0.00 0.00 3.24
424 2265 5.411361 ACAGATATAGCATCGACTGAGACTC 59.589 44.000 0.00 0.00 0.00 3.36
425 2266 4.941263 AGATATAGCATCGACTGAGACTCC 59.059 45.833 0.00 0.00 0.00 3.85
426 2267 1.300481 TAGCATCGACTGAGACTCCG 58.700 55.000 0.00 0.00 0.00 4.63
428 2269 0.171455 GCATCGACTGAGACTCCGTT 59.829 55.000 0.72 0.00 0.00 4.44
429 2270 1.400846 GCATCGACTGAGACTCCGTTA 59.599 52.381 0.72 0.00 0.00 3.18
430 2271 2.159421 GCATCGACTGAGACTCCGTTAA 60.159 50.000 0.72 0.00 0.00 2.01
431 2272 3.672511 GCATCGACTGAGACTCCGTTAAA 60.673 47.826 0.72 0.00 0.00 1.52
432 2273 4.673441 CATCGACTGAGACTCCGTTAAAT 58.327 43.478 0.72 0.00 0.00 1.40
433 2274 4.778534 TCGACTGAGACTCCGTTAAATT 57.221 40.909 0.72 0.00 0.00 1.82
435 2276 5.159209 TCGACTGAGACTCCGTTAAATTTC 58.841 41.667 0.72 0.00 0.00 2.17
436 2277 4.921515 CGACTGAGACTCCGTTAAATTTCA 59.078 41.667 0.72 0.00 0.00 2.69
437 2278 5.061064 CGACTGAGACTCCGTTAAATTTCAG 59.939 44.000 0.72 0.00 37.43 3.02
438 2279 5.855045 ACTGAGACTCCGTTAAATTTCAGT 58.145 37.500 0.00 0.00 39.19 3.41
440 2281 4.921515 TGAGACTCCGTTAAATTTCAGTCG 59.078 41.667 0.00 0.00 36.25 4.18
443 2284 6.164176 AGACTCCGTTAAATTTCAGTCGATT 58.836 36.000 0.00 0.00 36.25 3.34
444 2285 6.090898 AGACTCCGTTAAATTTCAGTCGATTG 59.909 38.462 0.68 0.68 36.25 2.67
445 2286 5.929992 ACTCCGTTAAATTTCAGTCGATTGA 59.070 36.000 6.51 6.51 0.00 2.57
460 3677 4.560819 GTCGATTGAGACTTAGCAAGACTG 59.439 45.833 0.00 0.00 38.09 3.51
461 3678 4.459337 TCGATTGAGACTTAGCAAGACTGA 59.541 41.667 5.85 0.00 33.75 3.41
462 3679 5.048013 TCGATTGAGACTTAGCAAGACTGAA 60.048 40.000 5.85 4.85 33.75 3.02
463 3680 5.635280 CGATTGAGACTTAGCAAGACTGAAA 59.365 40.000 5.85 2.60 31.70 2.69
464 3681 6.146184 CGATTGAGACTTAGCAAGACTGAAAA 59.854 38.462 5.85 0.85 31.70 2.29
465 3682 7.307396 CGATTGAGACTTAGCAAGACTGAAAAA 60.307 37.037 5.85 0.00 31.70 1.94
472 3988 6.967199 ACTTAGCAAGACTGAAAAAGAAAACG 59.033 34.615 3.37 0.00 0.00 3.60
491 4007 2.627699 ACGGAAGCAAACAATGAACCAT 59.372 40.909 0.00 0.00 0.00 3.55
493 4009 3.057315 CGGAAGCAAACAATGAACCATCT 60.057 43.478 0.00 0.00 0.00 2.90
510 4026 0.173481 TCTAAGCAACAGCGAGCGAT 59.827 50.000 0.00 0.00 35.48 4.58
511 4027 0.574454 CTAAGCAACAGCGAGCGATC 59.426 55.000 0.00 0.00 35.48 3.69
522 4040 1.555538 GAGCGATCGACGAATGCAC 59.444 57.895 21.57 14.37 45.77 4.57
529 4047 3.844099 CGATCGACGAATGCACGAATATA 59.156 43.478 10.26 0.00 45.77 0.86
543 4061 3.752222 ACGAATATAGGCTGGTCGAGTAG 59.248 47.826 14.87 0.00 35.71 2.57
578 4096 3.710209 AATCCTTCAGTCAAGACCTGG 57.290 47.619 0.00 0.00 33.29 4.45
654 4180 2.104792 CTCTTCAGTTGAGTTGGGGTCA 59.895 50.000 0.00 0.00 0.00 4.02
696 4222 0.460311 AGAGGACAGATTAACCGCCG 59.540 55.000 0.00 0.00 0.00 6.46
712 4238 2.419198 CGCCTCTTCCGATCCAGG 59.581 66.667 0.00 0.00 0.00 4.45
801 4327 0.108662 CTCCATTTGCTTTTCCCGGC 60.109 55.000 0.00 0.00 0.00 6.13
803 4329 1.445926 CATTTGCTTTTCCCGGCCG 60.446 57.895 21.04 21.04 0.00 6.13
804 4330 1.906333 ATTTGCTTTTCCCGGCCGT 60.906 52.632 26.12 0.00 0.00 5.68
805 4331 0.609681 ATTTGCTTTTCCCGGCCGTA 60.610 50.000 26.12 9.16 0.00 4.02
810 4349 4.770874 TTTCCCGGCCGTAGCAGC 62.771 66.667 26.12 0.00 42.56 5.25
986 4539 3.089784 CGTTTCTTGGCGATCCCG 58.910 61.111 0.00 0.00 35.87 5.14
987 4540 1.740296 CGTTTCTTGGCGATCCCGT 60.740 57.895 0.00 0.00 38.24 5.28
1385 4939 3.366724 TCGTCATTTTCATCCGTCTTTCG 59.633 43.478 0.00 0.00 39.52 3.46
1403 4957 0.575859 CGCGCAACTGATCTGATCTG 59.424 55.000 19.23 19.23 0.00 2.90
1404 4958 1.649664 GCGCAACTGATCTGATCTGT 58.350 50.000 20.36 20.36 42.28 3.41
1851 5451 1.517257 CTCCGCGCTCGACAAGATT 60.517 57.895 5.56 0.00 38.10 2.40
2076 5676 3.127533 GGCAACTTCGAGCGCCAT 61.128 61.111 2.29 0.00 44.25 4.40
2118 5718 3.431725 CGCCCAAAGTTCCCGCTC 61.432 66.667 0.00 0.00 0.00 5.03
2454 6054 3.805971 GCAACTTCACCGTACAAGTAGTT 59.194 43.478 0.00 0.00 32.36 2.24
2590 6190 0.533755 CTCGGCATAAGGGCAAGGAG 60.534 60.000 0.00 0.00 43.60 3.69
2617 6217 5.810587 AGTGTTTTGTAGATACTATGTGGCG 59.189 40.000 0.00 0.00 0.00 5.69
2702 6302 8.095452 ACCATAGTACATTCTCTTCCTTTCAT 57.905 34.615 0.00 0.00 0.00 2.57
2703 6303 9.213777 ACCATAGTACATTCTCTTCCTTTCATA 57.786 33.333 0.00 0.00 0.00 2.15
2708 6308 8.816894 AGTACATTCTCTTCCTTTCATAAGTCA 58.183 33.333 0.00 0.00 0.00 3.41
2709 6309 9.092876 GTACATTCTCTTCCTTTCATAAGTCAG 57.907 37.037 0.00 0.00 0.00 3.51
2710 6310 7.684529 ACATTCTCTTCCTTTCATAAGTCAGT 58.315 34.615 0.00 0.00 0.00 3.41
2711 6311 7.821846 ACATTCTCTTCCTTTCATAAGTCAGTC 59.178 37.037 0.00 0.00 0.00 3.51
2712 6312 6.918067 TCTCTTCCTTTCATAAGTCAGTCA 57.082 37.500 0.00 0.00 0.00 3.41
2713 6313 6.929625 TCTCTTCCTTTCATAAGTCAGTCAG 58.070 40.000 0.00 0.00 0.00 3.51
2714 6314 6.495181 TCTCTTCCTTTCATAAGTCAGTCAGT 59.505 38.462 0.00 0.00 0.00 3.41
2715 6315 6.692486 TCTTCCTTTCATAAGTCAGTCAGTC 58.308 40.000 0.00 0.00 0.00 3.51
2716 6316 6.267699 TCTTCCTTTCATAAGTCAGTCAGTCA 59.732 38.462 0.00 0.00 0.00 3.41
2717 6317 6.030548 TCCTTTCATAAGTCAGTCAGTCAG 57.969 41.667 0.00 0.00 0.00 3.51
2718 6318 5.540337 TCCTTTCATAAGTCAGTCAGTCAGT 59.460 40.000 0.00 0.00 0.00 3.41
2719 6319 5.866633 CCTTTCATAAGTCAGTCAGTCAGTC 59.133 44.000 0.00 0.00 0.00 3.51
2720 6320 6.405278 TTTCATAAGTCAGTCAGTCAGTCA 57.595 37.500 0.00 0.00 0.00 3.41
2721 6321 5.635417 TCATAAGTCAGTCAGTCAGTCAG 57.365 43.478 0.00 0.00 0.00 3.51
2722 6322 2.810439 AAGTCAGTCAGTCAGTCAGC 57.190 50.000 0.00 0.00 0.00 4.26
2723 6323 1.697284 AGTCAGTCAGTCAGTCAGCA 58.303 50.000 0.00 0.00 0.00 4.41
2724 6324 2.246469 AGTCAGTCAGTCAGTCAGCAT 58.754 47.619 0.00 0.00 0.00 3.79
2725 6325 2.230992 AGTCAGTCAGTCAGTCAGCATC 59.769 50.000 0.00 0.00 0.00 3.91
2726 6326 2.230992 GTCAGTCAGTCAGTCAGCATCT 59.769 50.000 0.00 0.00 0.00 2.90
2727 6327 3.441922 GTCAGTCAGTCAGTCAGCATCTA 59.558 47.826 0.00 0.00 0.00 1.98
2728 6328 4.082125 TCAGTCAGTCAGTCAGCATCTAA 58.918 43.478 0.00 0.00 0.00 2.10
2729 6329 4.082517 TCAGTCAGTCAGTCAGCATCTAAC 60.083 45.833 0.00 0.00 0.00 2.34
2730 6330 3.194542 AGTCAGTCAGTCAGCATCTAACC 59.805 47.826 0.00 0.00 0.00 2.85
2731 6331 2.164422 TCAGTCAGTCAGCATCTAACCG 59.836 50.000 0.00 0.00 0.00 4.44
2732 6332 1.134965 AGTCAGTCAGCATCTAACCGC 60.135 52.381 0.00 0.00 0.00 5.68
2733 6333 0.179137 TCAGTCAGCATCTAACCGCG 60.179 55.000 0.00 0.00 0.00 6.46
2734 6334 0.179137 CAGTCAGCATCTAACCGCGA 60.179 55.000 8.23 0.00 0.00 5.87
2735 6335 0.530744 AGTCAGCATCTAACCGCGAA 59.469 50.000 8.23 0.00 0.00 4.70
2736 6336 1.137086 AGTCAGCATCTAACCGCGAAT 59.863 47.619 8.23 0.00 0.00 3.34
2737 6337 2.361119 AGTCAGCATCTAACCGCGAATA 59.639 45.455 8.23 0.00 0.00 1.75
2738 6338 3.120792 GTCAGCATCTAACCGCGAATAA 58.879 45.455 8.23 0.00 0.00 1.40
2739 6339 3.554324 GTCAGCATCTAACCGCGAATAAA 59.446 43.478 8.23 0.00 0.00 1.40
2740 6340 4.033587 GTCAGCATCTAACCGCGAATAAAA 59.966 41.667 8.23 0.00 0.00 1.52
2741 6341 4.632251 TCAGCATCTAACCGCGAATAAAAA 59.368 37.500 8.23 0.00 0.00 1.94
2742 6342 4.728608 CAGCATCTAACCGCGAATAAAAAC 59.271 41.667 8.23 0.00 0.00 2.43
2743 6343 4.033019 GCATCTAACCGCGAATAAAAACC 58.967 43.478 8.23 0.00 0.00 3.27
2744 6344 4.437659 GCATCTAACCGCGAATAAAAACCA 60.438 41.667 8.23 0.00 0.00 3.67
2745 6345 4.666928 TCTAACCGCGAATAAAAACCAC 57.333 40.909 8.23 0.00 0.00 4.16
2746 6346 4.317488 TCTAACCGCGAATAAAAACCACT 58.683 39.130 8.23 0.00 0.00 4.00
2747 6347 5.477510 TCTAACCGCGAATAAAAACCACTA 58.522 37.500 8.23 0.00 0.00 2.74
2748 6348 6.108015 TCTAACCGCGAATAAAAACCACTAT 58.892 36.000 8.23 0.00 0.00 2.12
2749 6349 7.264221 TCTAACCGCGAATAAAAACCACTATA 58.736 34.615 8.23 0.00 0.00 1.31
2750 6350 6.930667 AACCGCGAATAAAAACCACTATAT 57.069 33.333 8.23 0.00 0.00 0.86
2751 6351 6.930667 ACCGCGAATAAAAACCACTATATT 57.069 33.333 8.23 0.00 0.00 1.28
2752 6352 6.951643 ACCGCGAATAAAAACCACTATATTC 58.048 36.000 8.23 0.00 33.47 1.75
2753 6353 6.539464 ACCGCGAATAAAAACCACTATATTCA 59.461 34.615 8.23 0.00 35.48 2.57
2754 6354 7.227910 ACCGCGAATAAAAACCACTATATTCAT 59.772 33.333 8.23 0.00 35.48 2.57
2755 6355 8.714179 CCGCGAATAAAAACCACTATATTCATA 58.286 33.333 8.23 0.00 35.48 2.15
2756 6356 9.525007 CGCGAATAAAAACCACTATATTCATAC 57.475 33.333 0.00 0.00 35.48 2.39
2762 6362 7.568199 AAAACCACTATATTCATACAGCACC 57.432 36.000 0.00 0.00 0.00 5.01
2763 6363 4.883083 ACCACTATATTCATACAGCACCG 58.117 43.478 0.00 0.00 0.00 4.94
2764 6364 4.587262 ACCACTATATTCATACAGCACCGA 59.413 41.667 0.00 0.00 0.00 4.69
2765 6365 5.246203 ACCACTATATTCATACAGCACCGAT 59.754 40.000 0.00 0.00 0.00 4.18
2766 6366 5.578336 CCACTATATTCATACAGCACCGATG 59.422 44.000 0.00 0.00 0.00 3.84
2767 6367 6.159293 CACTATATTCATACAGCACCGATGT 58.841 40.000 0.00 0.00 35.84 3.06
2768 6368 6.646653 CACTATATTCATACAGCACCGATGTT 59.353 38.462 0.00 0.00 33.09 2.71
2769 6369 6.868864 ACTATATTCATACAGCACCGATGTTC 59.131 38.462 0.00 0.00 33.09 3.18
2770 6370 3.326836 TTCATACAGCACCGATGTTCA 57.673 42.857 0.00 0.00 33.09 3.18
2771 6371 3.326836 TCATACAGCACCGATGTTCAA 57.673 42.857 0.00 0.00 33.09 2.69
2772 6372 3.872696 TCATACAGCACCGATGTTCAAT 58.127 40.909 0.00 0.00 33.09 2.57
2773 6373 3.622612 TCATACAGCACCGATGTTCAATG 59.377 43.478 0.00 0.00 33.09 2.82
2774 6374 1.167851 ACAGCACCGATGTTCAATGG 58.832 50.000 0.00 0.00 0.00 3.16
2775 6375 1.167851 CAGCACCGATGTTCAATGGT 58.832 50.000 0.00 0.00 34.29 3.55
2776 6376 1.541147 CAGCACCGATGTTCAATGGTT 59.459 47.619 0.00 0.00 30.72 3.67
2777 6377 1.812571 AGCACCGATGTTCAATGGTTC 59.187 47.619 0.00 0.00 30.72 3.62
2778 6378 1.539388 GCACCGATGTTCAATGGTTCA 59.461 47.619 0.00 0.00 30.72 3.18
2779 6379 2.164219 GCACCGATGTTCAATGGTTCAT 59.836 45.455 0.00 0.00 30.72 2.57
2780 6380 3.761657 CACCGATGTTCAATGGTTCATG 58.238 45.455 0.00 0.00 30.72 3.07
2781 6381 2.164219 ACCGATGTTCAATGGTTCATGC 59.836 45.455 0.00 0.00 0.00 4.06
2782 6382 2.424601 CCGATGTTCAATGGTTCATGCT 59.575 45.455 0.00 0.00 0.00 3.79
2783 6383 3.119388 CCGATGTTCAATGGTTCATGCTT 60.119 43.478 0.00 0.00 0.00 3.91
2784 6384 4.100529 CGATGTTCAATGGTTCATGCTTC 58.899 43.478 0.00 0.00 0.00 3.86
2785 6385 4.142534 CGATGTTCAATGGTTCATGCTTCT 60.143 41.667 0.00 0.00 0.00 2.85
2786 6386 5.620654 CGATGTTCAATGGTTCATGCTTCTT 60.621 40.000 0.00 0.00 0.00 2.52
2787 6387 4.873817 TGTTCAATGGTTCATGCTTCTTG 58.126 39.130 0.00 0.00 0.00 3.02
2788 6388 4.240096 GTTCAATGGTTCATGCTTCTTGG 58.760 43.478 0.00 0.00 0.00 3.61
2789 6389 3.499338 TCAATGGTTCATGCTTCTTGGT 58.501 40.909 0.00 0.00 0.00 3.67
2790 6390 3.256383 TCAATGGTTCATGCTTCTTGGTG 59.744 43.478 0.00 0.00 0.00 4.17
2791 6391 1.619654 TGGTTCATGCTTCTTGGTGG 58.380 50.000 0.00 0.00 0.00 4.61
2792 6392 0.244721 GGTTCATGCTTCTTGGTGGC 59.755 55.000 0.00 0.00 0.00 5.01
2793 6393 1.251251 GTTCATGCTTCTTGGTGGCT 58.749 50.000 0.00 0.00 0.00 4.75
2794 6394 1.200948 GTTCATGCTTCTTGGTGGCTC 59.799 52.381 0.00 0.00 0.00 4.70
2795 6395 0.694771 TCATGCTTCTTGGTGGCTCT 59.305 50.000 0.00 0.00 0.00 4.09
2796 6396 1.074405 TCATGCTTCTTGGTGGCTCTT 59.926 47.619 0.00 0.00 0.00 2.85
2797 6397 1.201647 CATGCTTCTTGGTGGCTCTTG 59.798 52.381 0.00 0.00 0.00 3.02
2798 6398 0.538057 TGCTTCTTGGTGGCTCTTGG 60.538 55.000 0.00 0.00 0.00 3.61
2799 6399 0.250901 GCTTCTTGGTGGCTCTTGGA 60.251 55.000 0.00 0.00 0.00 3.53
2800 6400 1.819305 GCTTCTTGGTGGCTCTTGGAA 60.819 52.381 0.00 0.00 0.00 3.53
2801 6401 2.586425 CTTCTTGGTGGCTCTTGGAAA 58.414 47.619 0.00 0.00 0.00 3.13
2802 6402 2.978156 TCTTGGTGGCTCTTGGAAAT 57.022 45.000 0.00 0.00 0.00 2.17
2803 6403 4.335416 CTTCTTGGTGGCTCTTGGAAATA 58.665 43.478 0.00 0.00 0.00 1.40
2804 6404 4.380843 TCTTGGTGGCTCTTGGAAATAA 57.619 40.909 0.00 0.00 0.00 1.40
2805 6405 4.735369 TCTTGGTGGCTCTTGGAAATAAA 58.265 39.130 0.00 0.00 0.00 1.40
2806 6406 4.766891 TCTTGGTGGCTCTTGGAAATAAAG 59.233 41.667 0.00 0.00 0.00 1.85
2807 6407 4.380843 TGGTGGCTCTTGGAAATAAAGA 57.619 40.909 0.00 0.00 32.80 2.52
2808 6408 4.934356 TGGTGGCTCTTGGAAATAAAGAT 58.066 39.130 0.00 0.00 33.34 2.40
2809 6409 6.073447 TGGTGGCTCTTGGAAATAAAGATA 57.927 37.500 0.00 0.00 33.34 1.98
2810 6410 6.122277 TGGTGGCTCTTGGAAATAAAGATAG 58.878 40.000 0.00 0.00 33.34 2.08
2811 6411 6.122964 GGTGGCTCTTGGAAATAAAGATAGT 58.877 40.000 0.00 0.00 33.34 2.12
2812 6412 6.603599 GGTGGCTCTTGGAAATAAAGATAGTT 59.396 38.462 0.00 0.00 33.34 2.24
2813 6413 7.122799 GGTGGCTCTTGGAAATAAAGATAGTTT 59.877 37.037 0.00 0.00 33.34 2.66
2814 6414 8.184848 GTGGCTCTTGGAAATAAAGATAGTTTC 58.815 37.037 0.00 0.00 33.34 2.78
2815 6415 8.109634 TGGCTCTTGGAAATAAAGATAGTTTCT 58.890 33.333 0.00 0.00 33.34 2.52
2816 6416 9.614792 GGCTCTTGGAAATAAAGATAGTTTCTA 57.385 33.333 0.00 0.00 33.34 2.10
2841 6441 8.530269 AGTTTCTAGTAATTGTAAGTGTTCGG 57.470 34.615 0.00 0.00 0.00 4.30
2842 6442 8.362639 AGTTTCTAGTAATTGTAAGTGTTCGGA 58.637 33.333 0.00 0.00 0.00 4.55
2843 6443 8.981647 GTTTCTAGTAATTGTAAGTGTTCGGAA 58.018 33.333 0.00 0.00 0.00 4.30
2844 6444 9.545105 TTTCTAGTAATTGTAAGTGTTCGGAAA 57.455 29.630 0.00 0.00 0.00 3.13
2845 6445 9.715121 TTCTAGTAATTGTAAGTGTTCGGAAAT 57.285 29.630 0.00 0.00 0.00 2.17
2854 6454 9.715121 TTGTAAGTGTTCGGAAATAAAGATAGT 57.285 29.630 0.00 0.00 0.00 2.12
2855 6455 9.715121 TGTAAGTGTTCGGAAATAAAGATAGTT 57.285 29.630 0.00 0.00 0.00 2.24
2896 6496 9.598517 TTTTGAAATGACAGCAAAAGAATAGTT 57.401 25.926 8.64 0.00 36.80 2.24
2897 6497 9.598517 TTTGAAATGACAGCAAAAGAATAGTTT 57.401 25.926 0.00 0.00 0.00 2.66
2898 6498 8.801715 TGAAATGACAGCAAAAGAATAGTTTC 57.198 30.769 0.00 0.00 0.00 2.78
2899 6499 8.632679 TGAAATGACAGCAAAAGAATAGTTTCT 58.367 29.630 0.00 0.00 44.20 2.52
2902 6502 8.854614 ATGACAGCAAAAGAATAGTTTCTAGT 57.145 30.769 0.00 0.00 41.42 2.57
2903 6503 9.944376 ATGACAGCAAAAGAATAGTTTCTAGTA 57.056 29.630 0.00 0.00 41.42 1.82
2904 6504 9.772973 TGACAGCAAAAGAATAGTTTCTAGTAA 57.227 29.630 0.00 0.00 41.42 2.24
2914 6514 9.771534 AGAATAGTTTCTAGTAATTGATGCCTC 57.228 33.333 0.00 0.00 40.47 4.70
2915 6515 8.594881 AATAGTTTCTAGTAATTGATGCCTCG 57.405 34.615 0.00 0.00 0.00 4.63
2916 6516 4.811557 AGTTTCTAGTAATTGATGCCTCGC 59.188 41.667 0.00 0.00 0.00 5.03
2917 6517 4.672587 TTCTAGTAATTGATGCCTCGCT 57.327 40.909 0.00 0.00 0.00 4.93
2918 6518 5.784578 TTCTAGTAATTGATGCCTCGCTA 57.215 39.130 0.00 0.00 0.00 4.26
2919 6519 5.122512 TCTAGTAATTGATGCCTCGCTAC 57.877 43.478 0.00 0.00 0.00 3.58
2920 6520 3.113260 AGTAATTGATGCCTCGCTACC 57.887 47.619 0.00 0.00 0.00 3.18
2921 6521 2.434336 AGTAATTGATGCCTCGCTACCA 59.566 45.455 0.00 0.00 0.00 3.25
2922 6522 2.645838 AATTGATGCCTCGCTACCAT 57.354 45.000 0.00 0.00 0.00 3.55
2923 6523 1.888215 ATTGATGCCTCGCTACCATG 58.112 50.000 0.00 0.00 0.00 3.66
2924 6524 0.179048 TTGATGCCTCGCTACCATGG 60.179 55.000 11.19 11.19 0.00 3.66
2925 6525 1.337384 TGATGCCTCGCTACCATGGT 61.337 55.000 23.55 23.55 0.00 3.55
2926 6526 0.179045 GATGCCTCGCTACCATGGTT 60.179 55.000 25.38 7.42 0.00 3.67
2927 6527 1.070134 GATGCCTCGCTACCATGGTTA 59.930 52.381 25.38 8.26 0.00 2.85
2928 6528 0.464036 TGCCTCGCTACCATGGTTAG 59.536 55.000 25.38 18.18 0.00 2.34
2929 6529 0.464452 GCCTCGCTACCATGGTTAGT 59.536 55.000 25.38 0.00 0.00 2.24
2930 6530 1.134491 GCCTCGCTACCATGGTTAGTT 60.134 52.381 25.38 0.00 0.00 2.24
2931 6531 2.679930 GCCTCGCTACCATGGTTAGTTT 60.680 50.000 25.38 0.00 0.00 2.66
2932 6532 3.606687 CCTCGCTACCATGGTTAGTTTT 58.393 45.455 25.38 0.00 0.00 2.43
2933 6533 4.007659 CCTCGCTACCATGGTTAGTTTTT 58.992 43.478 25.38 0.00 0.00 1.94
2934 6534 4.094442 CCTCGCTACCATGGTTAGTTTTTC 59.906 45.833 25.38 4.64 0.00 2.29
2935 6535 4.643463 TCGCTACCATGGTTAGTTTTTCA 58.357 39.130 25.38 0.00 0.00 2.69
2936 6536 5.064558 TCGCTACCATGGTTAGTTTTTCAA 58.935 37.500 25.38 0.00 0.00 2.69
2937 6537 5.708230 TCGCTACCATGGTTAGTTTTTCAAT 59.292 36.000 25.38 0.00 0.00 2.57
2938 6538 6.879993 TCGCTACCATGGTTAGTTTTTCAATA 59.120 34.615 25.38 0.00 0.00 1.90
2939 6539 7.065324 TCGCTACCATGGTTAGTTTTTCAATAG 59.935 37.037 25.38 10.39 0.00 1.73
2940 6540 7.148306 CGCTACCATGGTTAGTTTTTCAATAGT 60.148 37.037 25.38 0.00 0.00 2.12
2941 6541 7.968405 GCTACCATGGTTAGTTTTTCAATAGTG 59.032 37.037 25.38 0.00 0.00 2.74
2942 6542 6.687604 ACCATGGTTAGTTTTTCAATAGTGC 58.312 36.000 13.00 0.00 0.00 4.40
2943 6543 6.266558 ACCATGGTTAGTTTTTCAATAGTGCA 59.733 34.615 13.00 0.00 0.00 4.57
2944 6544 6.808212 CCATGGTTAGTTTTTCAATAGTGCAG 59.192 38.462 2.57 0.00 0.00 4.41
2945 6545 7.309133 CCATGGTTAGTTTTTCAATAGTGCAGA 60.309 37.037 2.57 0.00 0.00 4.26
2946 6546 7.575414 TGGTTAGTTTTTCAATAGTGCAGAA 57.425 32.000 0.00 0.00 0.00 3.02
2947 6547 8.001881 TGGTTAGTTTTTCAATAGTGCAGAAA 57.998 30.769 0.00 0.00 0.00 2.52
2948 6548 8.637986 TGGTTAGTTTTTCAATAGTGCAGAAAT 58.362 29.630 0.00 0.00 32.00 2.17
2949 6549 8.915654 GGTTAGTTTTTCAATAGTGCAGAAATG 58.084 33.333 0.00 0.00 32.00 2.32
2950 6550 8.427774 GTTAGTTTTTCAATAGTGCAGAAATGC 58.572 33.333 0.00 0.00 32.00 3.56
2951 6551 6.752168 AGTTTTTCAATAGTGCAGAAATGCT 58.248 32.000 1.53 0.00 32.00 3.79
2952 6552 7.212274 AGTTTTTCAATAGTGCAGAAATGCTT 58.788 30.769 1.53 0.00 32.00 3.91
2953 6553 8.359642 AGTTTTTCAATAGTGCAGAAATGCTTA 58.640 29.630 1.53 0.00 32.00 3.09
2954 6554 8.427774 GTTTTTCAATAGTGCAGAAATGCTTAC 58.572 33.333 1.53 0.00 32.00 2.34
2955 6555 6.816134 TTCAATAGTGCAGAAATGCTTACA 57.184 33.333 1.53 0.00 35.49 2.41
2956 6556 6.182039 TCAATAGTGCAGAAATGCTTACAC 57.818 37.500 1.53 0.00 33.35 2.90
2957 6557 5.704978 TCAATAGTGCAGAAATGCTTACACA 59.295 36.000 1.53 0.00 34.85 3.72
2958 6558 3.904136 AGTGCAGAAATGCTTACACAC 57.096 42.857 1.53 0.00 34.85 3.82
2959 6559 3.213506 AGTGCAGAAATGCTTACACACA 58.786 40.909 1.53 0.00 34.85 3.72
2960 6560 3.631686 AGTGCAGAAATGCTTACACACAA 59.368 39.130 1.53 0.00 34.85 3.33
2961 6561 4.279169 AGTGCAGAAATGCTTACACACAAT 59.721 37.500 1.53 0.00 34.85 2.71
2962 6562 4.618489 GTGCAGAAATGCTTACACACAATC 59.382 41.667 1.53 0.00 33.38 2.67
2963 6563 4.520111 TGCAGAAATGCTTACACACAATCT 59.480 37.500 1.53 0.00 35.49 2.40
2964 6564 5.009911 TGCAGAAATGCTTACACACAATCTT 59.990 36.000 1.53 0.00 35.49 2.40
2965 6565 6.206438 TGCAGAAATGCTTACACACAATCTTA 59.794 34.615 1.53 0.00 35.49 2.10
2966 6566 7.083858 GCAGAAATGCTTACACACAATCTTAA 58.916 34.615 0.00 0.00 0.00 1.85
2967 6567 7.061094 GCAGAAATGCTTACACACAATCTTAAC 59.939 37.037 0.00 0.00 0.00 2.01
2968 6568 8.075574 CAGAAATGCTTACACACAATCTTAACA 58.924 33.333 0.00 0.00 0.00 2.41
2969 6569 8.292448 AGAAATGCTTACACACAATCTTAACAG 58.708 33.333 0.00 0.00 0.00 3.16
2970 6570 7.510549 AATGCTTACACACAATCTTAACAGT 57.489 32.000 0.00 0.00 0.00 3.55
2971 6571 8.615878 AATGCTTACACACAATCTTAACAGTA 57.384 30.769 0.00 0.00 0.00 2.74
2972 6572 7.652300 TGCTTACACACAATCTTAACAGTAG 57.348 36.000 0.00 0.00 0.00 2.57
2973 6573 6.147164 TGCTTACACACAATCTTAACAGTAGC 59.853 38.462 0.00 0.00 0.00 3.58
2974 6574 6.669977 GCTTACACACAATCTTAACAGTAGCG 60.670 42.308 0.00 0.00 0.00 4.26
2975 6575 3.432252 ACACACAATCTTAACAGTAGCGC 59.568 43.478 0.00 0.00 0.00 5.92
2976 6576 2.666508 ACACAATCTTAACAGTAGCGCG 59.333 45.455 0.00 0.00 0.00 6.86
2977 6577 2.666508 CACAATCTTAACAGTAGCGCGT 59.333 45.455 8.43 0.00 0.00 6.01
2978 6578 2.921754 ACAATCTTAACAGTAGCGCGTC 59.078 45.455 8.43 0.00 0.00 5.19
2979 6579 2.921121 CAATCTTAACAGTAGCGCGTCA 59.079 45.455 8.43 0.00 0.00 4.35
2980 6580 2.933495 TCTTAACAGTAGCGCGTCAT 57.067 45.000 8.43 0.00 0.00 3.06
2981 6581 3.226346 TCTTAACAGTAGCGCGTCATT 57.774 42.857 8.43 0.00 0.00 2.57
2982 6582 3.581755 TCTTAACAGTAGCGCGTCATTT 58.418 40.909 8.43 0.00 0.00 2.32
2983 6583 3.991773 TCTTAACAGTAGCGCGTCATTTT 59.008 39.130 8.43 0.00 0.00 1.82
2984 6584 4.449743 TCTTAACAGTAGCGCGTCATTTTT 59.550 37.500 8.43 0.00 0.00 1.94
3006 6606 2.063015 ATTCACGCCACTGGGGTTCA 62.063 55.000 14.99 5.44 46.84 3.18
3035 6635 6.874134 CCTCTGCAGTTAAGTGTTTACTGTAT 59.126 38.462 14.67 0.00 37.19 2.29
3038 6638 5.703592 TGCAGTTAAGTGTTTACTGTATGGG 59.296 40.000 11.85 0.00 37.19 4.00
3118 6718 9.989296 TCCCCTTAATTCTATTTCAATTCTTCA 57.011 29.630 0.00 0.00 0.00 3.02
3263 6864 2.595009 GATGGTCAAGGACGGAGGCC 62.595 65.000 0.00 0.00 32.65 5.19
3308 6909 0.179032 CTCCAGCGAGCTCCTCTAGA 60.179 60.000 8.47 3.55 0.00 2.43
3309 6910 0.179032 TCCAGCGAGCTCCTCTAGAG 60.179 60.000 13.18 13.18 46.29 2.43
3318 6919 1.588674 CTCCTCTAGAGCACGACGAT 58.411 55.000 14.73 0.00 35.31 3.73
3320 6921 1.134491 TCCTCTAGAGCACGACGATGA 60.134 52.381 14.73 0.00 0.00 2.92
3322 6923 1.666189 CTCTAGAGCACGACGATGACA 59.334 52.381 6.86 0.00 0.00 3.58
3323 6924 2.081462 TCTAGAGCACGACGATGACAA 58.919 47.619 0.00 0.00 0.00 3.18
3324 6925 2.096013 TCTAGAGCACGACGATGACAAG 59.904 50.000 0.00 0.00 0.00 3.16
3327 6928 1.010935 AGCACGACGATGACAAGCTG 61.011 55.000 0.00 0.00 0.00 4.24
3328 6929 1.959899 GCACGACGATGACAAGCTGG 61.960 60.000 0.00 0.00 0.00 4.85
3330 6931 0.109086 ACGACGATGACAAGCTGGAG 60.109 55.000 0.00 0.00 0.00 3.86
3332 6933 1.078848 ACGATGACAAGCTGGAGGC 60.079 57.895 0.00 0.00 42.19 4.70
3398 6999 3.403558 GGAGGAGGGTGGCAGACC 61.404 72.222 0.00 0.00 45.28 3.85
3448 7049 1.806568 GCTCTCCTCTGACGAGTGG 59.193 63.158 0.00 0.00 35.43 4.00
3521 7122 1.676967 GGCAGCTGGACCTCTTTGG 60.677 63.158 17.12 0.00 42.93 3.28
3525 7126 1.973812 GCTGGACCTCTTTGGCCAC 60.974 63.158 3.88 0.00 40.22 5.01
3531 7132 1.676967 CCTCTTTGGCCACCTGCTC 60.677 63.158 3.88 0.00 40.92 4.26
3544 7145 1.743252 CTGCTCGGCCAAACTCCTC 60.743 63.158 2.24 0.00 0.00 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 1.589716 CCACCAAAGTAGCCAGCAGC 61.590 60.000 0.00 0.00 44.25 5.25
7 8 1.589716 GCCACCAAAGTAGCCAGCAG 61.590 60.000 0.00 0.00 0.00 4.24
8 9 1.603455 GCCACCAAAGTAGCCAGCA 60.603 57.895 0.00 0.00 0.00 4.41
9 10 3.278157 GCCACCAAAGTAGCCAGC 58.722 61.111 0.00 0.00 0.00 4.85
12 13 1.302993 TTCGGCCACCAAAGTAGCC 60.303 57.895 2.24 0.00 46.27 3.93
13 14 0.321298 TCTTCGGCCACCAAAGTAGC 60.321 55.000 2.24 0.00 0.00 3.58
14 15 1.439679 GTCTTCGGCCACCAAAGTAG 58.560 55.000 2.24 0.00 0.00 2.57
15 16 0.035739 GGTCTTCGGCCACCAAAGTA 59.964 55.000 2.24 0.00 32.33 2.24
16 17 1.228154 GGTCTTCGGCCACCAAAGT 60.228 57.895 2.24 0.00 32.33 2.66
17 18 0.955919 GAGGTCTTCGGCCACCAAAG 60.956 60.000 12.26 5.44 34.80 2.77
18 19 1.072505 GAGGTCTTCGGCCACCAAA 59.927 57.895 12.26 0.00 34.80 3.28
19 20 2.747686 GAGGTCTTCGGCCACCAA 59.252 61.111 12.26 0.00 34.80 3.67
20 21 3.691342 CGAGGTCTTCGGCCACCA 61.691 66.667 12.26 0.00 45.54 4.17
37 38 5.537188 AGAACTAAGCTTGATCGATCCATC 58.463 41.667 22.31 7.57 0.00 3.51
38 39 5.543507 AGAACTAAGCTTGATCGATCCAT 57.456 39.130 22.31 6.82 0.00 3.41
39 40 5.105351 TGAAGAACTAAGCTTGATCGATCCA 60.105 40.000 22.31 11.00 0.00 3.41
40 41 5.352284 TGAAGAACTAAGCTTGATCGATCC 58.648 41.667 22.31 7.46 0.00 3.36
41 42 5.051106 GCTGAAGAACTAAGCTTGATCGATC 60.051 44.000 18.72 18.72 34.05 3.69
42 43 4.808364 GCTGAAGAACTAAGCTTGATCGAT 59.192 41.667 9.86 0.00 34.05 3.59
43 44 4.081972 AGCTGAAGAACTAAGCTTGATCGA 60.082 41.667 9.86 0.00 44.79 3.59
44 45 4.180057 AGCTGAAGAACTAAGCTTGATCG 58.820 43.478 9.86 0.00 44.79 3.69
51 52 5.163774 CCAAGATGAAGCTGAAGAACTAAGC 60.164 44.000 0.00 0.00 37.20 3.09
52 53 5.936956 ACCAAGATGAAGCTGAAGAACTAAG 59.063 40.000 0.00 0.00 0.00 2.18
53 54 5.869579 ACCAAGATGAAGCTGAAGAACTAA 58.130 37.500 0.00 0.00 0.00 2.24
54 55 5.489792 ACCAAGATGAAGCTGAAGAACTA 57.510 39.130 0.00 0.00 0.00 2.24
55 56 4.363991 ACCAAGATGAAGCTGAAGAACT 57.636 40.909 0.00 0.00 0.00 3.01
56 57 5.241662 ACTACCAAGATGAAGCTGAAGAAC 58.758 41.667 0.00 0.00 0.00 3.01
57 58 5.489792 ACTACCAAGATGAAGCTGAAGAA 57.510 39.130 0.00 0.00 0.00 2.52
58 59 5.240891 CAACTACCAAGATGAAGCTGAAGA 58.759 41.667 0.00 0.00 0.00 2.87
59 60 4.142730 GCAACTACCAAGATGAAGCTGAAG 60.143 45.833 0.00 0.00 0.00 3.02
60 61 3.753272 GCAACTACCAAGATGAAGCTGAA 59.247 43.478 0.00 0.00 0.00 3.02
61 62 3.008375 AGCAACTACCAAGATGAAGCTGA 59.992 43.478 0.00 0.00 0.00 4.26
62 63 3.341823 AGCAACTACCAAGATGAAGCTG 58.658 45.455 0.00 0.00 0.00 4.24
63 64 3.710209 AGCAACTACCAAGATGAAGCT 57.290 42.857 0.00 0.00 0.00 3.74
87 88 5.515626 CGATAGTGCACAAACCTAAGACTAC 59.484 44.000 21.04 0.00 0.00 2.73
89 90 4.495422 CGATAGTGCACAAACCTAAGACT 58.505 43.478 21.04 0.00 0.00 3.24
135 1976 5.008613 TGGTAAAGAAAGACACAACATCAGC 59.991 40.000 0.00 0.00 0.00 4.26
170 2011 3.758554 GACCATCCACTTACAAGCAACAT 59.241 43.478 0.00 0.00 0.00 2.71
187 2028 3.038280 TGACCAGGATTACATCGACCAT 58.962 45.455 0.00 0.00 0.00 3.55
188 2029 2.462723 TGACCAGGATTACATCGACCA 58.537 47.619 0.00 0.00 0.00 4.02
190 2031 4.273480 CCAATTGACCAGGATTACATCGAC 59.727 45.833 7.12 0.00 0.00 4.20
206 2047 6.418057 AGATTTAACAAAGCCACCAATTGA 57.582 33.333 7.12 0.00 0.00 2.57
208 2049 7.962441 ACTTAGATTTAACAAAGCCACCAATT 58.038 30.769 0.00 0.00 0.00 2.32
213 2054 5.410439 TCCGACTTAGATTTAACAAAGCCAC 59.590 40.000 0.00 0.00 0.00 5.01
229 2070 2.549349 GGCTCAAACCTTGTCCGACTTA 60.549 50.000 0.00 0.00 0.00 2.24
249 2090 4.214327 GCCGAGCCCGAGAGAAGG 62.214 72.222 0.00 0.00 38.22 3.46
261 2102 1.134965 AGAGAAAAGACATCGGCCGAG 60.135 52.381 33.87 25.42 0.00 4.63
287 2128 2.897969 TGAGACCTAGTCACACCCTTTC 59.102 50.000 0.00 0.00 34.60 2.62
291 2132 1.819903 GACTGAGACCTAGTCACACCC 59.180 57.143 0.00 0.00 43.12 4.61
292 2133 1.469308 CGACTGAGACCTAGTCACACC 59.531 57.143 0.00 0.00 43.65 4.16
293 2134 2.160022 GTCGACTGAGACCTAGTCACAC 59.840 54.545 8.70 0.00 43.65 3.82
294 2135 2.038689 AGTCGACTGAGACCTAGTCACA 59.961 50.000 19.30 0.00 43.65 3.58
295 2136 2.417239 CAGTCGACTGAGACCTAGTCAC 59.583 54.545 36.73 0.00 46.59 3.67
296 2137 2.701107 CAGTCGACTGAGACCTAGTCA 58.299 52.381 36.73 0.00 46.59 3.41
307 2148 5.230942 ACTTGGTTAAATCTCAGTCGACTG 58.769 41.667 34.76 34.76 45.08 3.51
309 2150 5.471257 AGACTTGGTTAAATCTCAGTCGAC 58.529 41.667 7.70 7.70 0.00 4.20
310 2151 5.619309 CGAGACTTGGTTAAATCTCAGTCGA 60.619 44.000 0.00 0.00 37.97 4.20
311 2152 4.559251 CGAGACTTGGTTAAATCTCAGTCG 59.441 45.833 0.00 0.00 37.97 4.18
313 2154 4.283722 ACCGAGACTTGGTTAAATCTCAGT 59.716 41.667 8.76 0.00 37.97 3.41
314 2155 4.822026 ACCGAGACTTGGTTAAATCTCAG 58.178 43.478 8.76 0.00 37.97 3.35
315 2156 4.282449 TGACCGAGACTTGGTTAAATCTCA 59.718 41.667 15.92 4.60 40.63 3.27
316 2157 4.817517 TGACCGAGACTTGGTTAAATCTC 58.182 43.478 15.92 1.97 40.63 2.75
317 2158 4.884668 TGACCGAGACTTGGTTAAATCT 57.115 40.909 15.92 0.00 40.63 2.40
318 2159 4.995487 ACTTGACCGAGACTTGGTTAAATC 59.005 41.667 15.92 3.38 40.63 2.17
320 2161 4.124238 CACTTGACCGAGACTTGGTTAAA 58.876 43.478 15.92 12.11 40.63 1.52
321 2162 3.385433 TCACTTGACCGAGACTTGGTTAA 59.615 43.478 15.92 16.10 40.63 2.01
322 2163 2.960384 TCACTTGACCGAGACTTGGTTA 59.040 45.455 15.92 9.09 40.63 2.85
323 2164 1.760613 TCACTTGACCGAGACTTGGTT 59.239 47.619 15.92 0.00 40.63 3.67
324 2165 1.068741 GTCACTTGACCGAGACTTGGT 59.931 52.381 14.73 14.73 44.10 3.67
325 2166 1.068588 TGTCACTTGACCGAGACTTGG 59.931 52.381 7.25 7.25 44.15 3.61
326 2167 2.509052 TGTCACTTGACCGAGACTTG 57.491 50.000 6.91 0.00 44.15 3.16
327 2168 4.038763 TGTTATGTCACTTGACCGAGACTT 59.961 41.667 6.91 0.00 44.15 3.01
328 2169 3.572682 TGTTATGTCACTTGACCGAGACT 59.427 43.478 6.91 0.00 44.15 3.24
330 2171 4.494484 CATGTTATGTCACTTGACCGAGA 58.506 43.478 6.91 0.00 44.15 4.04
331 2172 3.062639 GCATGTTATGTCACTTGACCGAG 59.937 47.826 6.91 0.00 44.15 4.63
333 2174 2.741517 TGCATGTTATGTCACTTGACCG 59.258 45.455 6.91 0.00 44.15 4.79
334 2175 4.764679 TTGCATGTTATGTCACTTGACC 57.235 40.909 6.91 0.00 44.15 4.02
373 2214 8.942338 AGATGCTACATTAAGATTCGTGTAAA 57.058 30.769 0.00 0.00 0.00 2.01
376 2217 6.477033 GTGAGATGCTACATTAAGATTCGTGT 59.523 38.462 0.00 0.00 0.00 4.49
377 2218 6.476706 TGTGAGATGCTACATTAAGATTCGTG 59.523 38.462 0.00 0.00 0.00 4.35
378 2219 6.573434 TGTGAGATGCTACATTAAGATTCGT 58.427 36.000 0.00 0.00 0.00 3.85
379 2220 6.920210 TCTGTGAGATGCTACATTAAGATTCG 59.080 38.462 0.00 0.00 0.00 3.34
380 2221 8.830201 ATCTGTGAGATGCTACATTAAGATTC 57.170 34.615 0.00 0.00 32.80 2.52
386 2227 8.353423 TGCTATATCTGTGAGATGCTACATTA 57.647 34.615 0.00 0.00 35.37 1.90
387 2228 7.237209 TGCTATATCTGTGAGATGCTACATT 57.763 36.000 0.00 0.00 35.37 2.71
388 2229 6.847421 TGCTATATCTGTGAGATGCTACAT 57.153 37.500 0.00 0.00 35.37 2.29
389 2230 6.404074 CGATGCTATATCTGTGAGATGCTACA 60.404 42.308 0.00 0.00 35.37 2.74
390 2231 5.970612 CGATGCTATATCTGTGAGATGCTAC 59.029 44.000 0.00 0.00 35.37 3.58
391 2232 5.882557 TCGATGCTATATCTGTGAGATGCTA 59.117 40.000 0.00 0.00 35.37 3.49
392 2233 4.704057 TCGATGCTATATCTGTGAGATGCT 59.296 41.667 0.00 0.00 35.37 3.79
393 2234 4.797868 GTCGATGCTATATCTGTGAGATGC 59.202 45.833 0.00 0.00 35.37 3.91
394 2235 6.028987 CAGTCGATGCTATATCTGTGAGATG 58.971 44.000 0.00 0.00 35.37 2.90
395 2236 5.942826 TCAGTCGATGCTATATCTGTGAGAT 59.057 40.000 0.00 0.00 38.70 2.75
397 2238 5.411053 TCTCAGTCGATGCTATATCTGTGAG 59.589 44.000 0.00 0.00 0.00 3.51
398 2239 5.180304 GTCTCAGTCGATGCTATATCTGTGA 59.820 44.000 0.00 0.00 0.00 3.58
399 2240 5.181056 AGTCTCAGTCGATGCTATATCTGTG 59.819 44.000 0.00 0.00 0.00 3.66
400 2241 5.312895 AGTCTCAGTCGATGCTATATCTGT 58.687 41.667 0.00 0.00 0.00 3.41
401 2242 5.163764 GGAGTCTCAGTCGATGCTATATCTG 60.164 48.000 1.47 0.00 0.00 2.90
402 2243 4.941263 GGAGTCTCAGTCGATGCTATATCT 59.059 45.833 1.47 0.00 0.00 1.98
403 2244 4.201773 CGGAGTCTCAGTCGATGCTATATC 60.202 50.000 1.47 0.00 0.00 1.63
406 2247 1.876799 CGGAGTCTCAGTCGATGCTAT 59.123 52.381 1.47 0.00 0.00 2.97
407 2248 1.300481 CGGAGTCTCAGTCGATGCTA 58.700 55.000 1.47 0.00 0.00 3.49
409 2250 0.171455 AACGGAGTCTCAGTCGATGC 59.829 55.000 6.08 0.00 45.00 3.91
410 2251 3.759527 TTAACGGAGTCTCAGTCGATG 57.240 47.619 6.08 0.00 45.00 3.84
411 2252 4.985538 ATTTAACGGAGTCTCAGTCGAT 57.014 40.909 6.08 0.00 45.00 3.59
413 2254 4.921515 TGAAATTTAACGGAGTCTCAGTCG 59.078 41.667 6.08 0.95 45.00 4.18
414 2255 5.927115 ACTGAAATTTAACGGAGTCTCAGTC 59.073 40.000 6.08 0.00 45.00 3.51
415 2256 5.855045 ACTGAAATTTAACGGAGTCTCAGT 58.145 37.500 1.47 0.25 45.00 3.41
416 2257 5.061064 CGACTGAAATTTAACGGAGTCTCAG 59.939 44.000 1.47 0.00 45.00 3.35
417 2258 4.921515 CGACTGAAATTTAACGGAGTCTCA 59.078 41.667 1.47 0.00 45.00 3.27
418 2259 5.159209 TCGACTGAAATTTAACGGAGTCTC 58.841 41.667 0.00 0.00 45.00 3.36
419 2260 5.130292 TCGACTGAAATTTAACGGAGTCT 57.870 39.130 0.00 0.00 45.00 3.24
422 2263 6.310467 TCTCAATCGACTGAAATTTAACGGAG 59.690 38.462 0.00 0.00 0.00 4.63
423 2264 6.090358 GTCTCAATCGACTGAAATTTAACGGA 59.910 38.462 0.00 0.00 0.00 4.69
424 2265 6.090898 AGTCTCAATCGACTGAAATTTAACGG 59.909 38.462 0.00 0.00 42.39 4.44
425 2266 7.050281 AGTCTCAATCGACTGAAATTTAACG 57.950 36.000 0.00 0.00 42.39 3.18
426 2267 9.959775 CTAAGTCTCAATCGACTGAAATTTAAC 57.040 33.333 0.00 0.00 43.14 2.01
428 2269 7.817478 TGCTAAGTCTCAATCGACTGAAATTTA 59.183 33.333 0.00 0.00 43.14 1.40
429 2270 6.650807 TGCTAAGTCTCAATCGACTGAAATTT 59.349 34.615 0.00 0.00 43.14 1.82
430 2271 6.166279 TGCTAAGTCTCAATCGACTGAAATT 58.834 36.000 0.00 0.00 43.14 1.82
431 2272 5.724328 TGCTAAGTCTCAATCGACTGAAAT 58.276 37.500 0.00 0.00 43.14 2.17
432 2273 5.134202 TGCTAAGTCTCAATCGACTGAAA 57.866 39.130 0.00 0.00 43.14 2.69
433 2274 4.783764 TGCTAAGTCTCAATCGACTGAA 57.216 40.909 0.00 0.00 43.14 3.02
435 2276 4.560819 GTCTTGCTAAGTCTCAATCGACTG 59.439 45.833 0.00 0.00 43.14 3.51
436 2277 4.461081 AGTCTTGCTAAGTCTCAATCGACT 59.539 41.667 0.00 0.00 45.73 4.18
437 2278 4.560819 CAGTCTTGCTAAGTCTCAATCGAC 59.439 45.833 0.00 0.00 0.00 4.20
438 2279 4.459337 TCAGTCTTGCTAAGTCTCAATCGA 59.541 41.667 0.00 0.00 0.00 3.59
440 2281 7.426929 TTTTCAGTCTTGCTAAGTCTCAATC 57.573 36.000 0.00 0.00 0.00 2.67
443 2284 6.582636 TCTTTTTCAGTCTTGCTAAGTCTCA 58.417 36.000 0.00 0.00 0.00 3.27
444 2285 7.484035 TTCTTTTTCAGTCTTGCTAAGTCTC 57.516 36.000 0.00 0.00 0.00 3.36
445 2286 7.865706 TTTCTTTTTCAGTCTTGCTAAGTCT 57.134 32.000 0.00 0.00 0.00 3.24
456 3673 4.668289 TGCTTCCGTTTTCTTTTTCAGTC 58.332 39.130 0.00 0.00 0.00 3.51
457 3674 4.712122 TGCTTCCGTTTTCTTTTTCAGT 57.288 36.364 0.00 0.00 0.00 3.41
458 3675 5.347364 TGTTTGCTTCCGTTTTCTTTTTCAG 59.653 36.000 0.00 0.00 0.00 3.02
460 3677 5.771602 TGTTTGCTTCCGTTTTCTTTTTC 57.228 34.783 0.00 0.00 0.00 2.29
461 3678 6.370166 TCATTGTTTGCTTCCGTTTTCTTTTT 59.630 30.769 0.00 0.00 0.00 1.94
462 3679 5.872070 TCATTGTTTGCTTCCGTTTTCTTTT 59.128 32.000 0.00 0.00 0.00 2.27
463 3680 5.415221 TCATTGTTTGCTTCCGTTTTCTTT 58.585 33.333 0.00 0.00 0.00 2.52
464 3681 5.004922 TCATTGTTTGCTTCCGTTTTCTT 57.995 34.783 0.00 0.00 0.00 2.52
465 3682 4.647424 TCATTGTTTGCTTCCGTTTTCT 57.353 36.364 0.00 0.00 0.00 2.52
472 3988 4.525912 AGATGGTTCATTGTTTGCTTCC 57.474 40.909 0.00 0.00 0.00 3.46
491 4007 0.173481 ATCGCTCGCTGTTGCTTAGA 59.827 50.000 0.00 0.00 36.97 2.10
493 4009 1.139816 CGATCGCTCGCTGTTGCTTA 61.140 55.000 0.26 0.00 38.20 3.09
510 4026 3.561503 CCTATATTCGTGCATTCGTCGA 58.438 45.455 0.00 0.00 0.00 4.20
511 4027 2.090658 GCCTATATTCGTGCATTCGTCG 59.909 50.000 0.00 0.00 0.00 5.12
522 4040 3.752222 ACTACTCGACCAGCCTATATTCG 59.248 47.826 0.00 0.00 0.00 3.34
529 4047 1.599606 CTGCACTACTCGACCAGCCT 61.600 60.000 0.00 0.00 0.00 4.58
543 4061 1.348594 GATTTCCTACGCGCTGCAC 59.651 57.895 5.73 0.00 0.00 4.57
578 4096 0.716108 CGCTCAACACGAGATGGAAC 59.284 55.000 0.00 0.00 45.45 3.62
627 4153 1.743252 CTCAACTGAAGAGGCCGCC 60.743 63.158 1.49 0.00 0.00 6.13
654 4180 2.103339 AACCGGACGTGGGAACGAAT 62.103 55.000 9.46 0.00 36.85 3.34
671 4197 5.695363 GGCGGTTAATCTGTCCTCTATAAAC 59.305 44.000 0.00 0.00 0.00 2.01
685 4211 1.158484 GGAAGAGGCGGCGGTTAATC 61.158 60.000 9.78 0.00 0.00 1.75
712 4238 2.038837 GGAGTTAACCACCAGCCGC 61.039 63.158 12.65 0.00 0.00 6.53
965 4516 3.718480 GATCGCCAAGAAACGCCGC 62.718 63.158 0.00 0.00 0.00 6.53
966 4517 2.399611 GATCGCCAAGAAACGCCG 59.600 61.111 0.00 0.00 0.00 6.46
967 4518 2.761195 GGGATCGCCAAGAAACGCC 61.761 63.158 0.00 0.00 35.15 5.68
968 4519 2.791927 GGGATCGCCAAGAAACGC 59.208 61.111 0.00 0.00 35.15 4.84
969 4520 1.693083 GACGGGATCGCCAAGAAACG 61.693 60.000 3.90 0.00 40.63 3.60
970 4521 1.366854 GGACGGGATCGCCAAGAAAC 61.367 60.000 3.90 0.00 40.63 2.78
986 4539 2.467826 GCCATTGCTCTGCTCGGAC 61.468 63.158 0.00 0.00 33.53 4.79
987 4540 2.124983 GCCATTGCTCTGCTCGGA 60.125 61.111 0.00 0.00 33.53 4.55
1385 4939 1.649664 ACAGATCAGATCAGTTGCGC 58.350 50.000 13.14 0.00 0.00 6.09
1403 4957 4.201851 CCACGAATCTGATGGATCAACAAC 60.202 45.833 0.00 0.00 36.18 3.32
1404 4958 3.940852 CCACGAATCTGATGGATCAACAA 59.059 43.478 0.00 0.00 36.18 2.83
1851 5451 4.424711 GGCATGCTCCCGAACCCA 62.425 66.667 18.92 0.00 0.00 4.51
2076 5676 0.953471 CGAACGTGAAGATGCCCCAA 60.953 55.000 0.00 0.00 0.00 4.12
2234 5834 3.285371 CGTAGGCCACGTTCTCCT 58.715 61.111 16.51 5.48 45.82 3.69
2590 6190 8.601476 GCCACATAGTATCTACAAAACACTTAC 58.399 37.037 0.00 0.00 0.00 2.34
2610 6210 2.170166 ACATCATTTTCACCGCCACAT 58.830 42.857 0.00 0.00 0.00 3.21
2611 6211 1.614996 ACATCATTTTCACCGCCACA 58.385 45.000 0.00 0.00 0.00 4.17
2617 6217 6.490566 AAGGTAACGTACATCATTTTCACC 57.509 37.500 0.00 0.00 46.39 4.02
2644 6244 2.710377 AGCACGAGCATCAACCAATTA 58.290 42.857 7.77 0.00 45.49 1.40
2687 6287 7.911651 TGACTGACTTATGAAAGGAAGAGAAT 58.088 34.615 0.00 0.00 37.01 2.40
2688 6288 7.015682 ACTGACTGACTTATGAAAGGAAGAGAA 59.984 37.037 0.00 0.00 37.01 2.87
2697 6297 6.405278 TGACTGACTGACTGACTTATGAAA 57.595 37.500 0.00 0.00 0.00 2.69
2702 6302 3.222603 TGCTGACTGACTGACTGACTTA 58.777 45.455 0.00 0.00 0.00 2.24
2703 6303 2.034878 TGCTGACTGACTGACTGACTT 58.965 47.619 0.00 0.00 0.00 3.01
2704 6304 1.697284 TGCTGACTGACTGACTGACT 58.303 50.000 0.00 0.00 0.00 3.41
2705 6305 2.230992 AGATGCTGACTGACTGACTGAC 59.769 50.000 0.00 0.00 0.00 3.51
2706 6306 2.523245 AGATGCTGACTGACTGACTGA 58.477 47.619 0.00 0.00 0.00 3.41
2707 6307 4.172505 GTTAGATGCTGACTGACTGACTG 58.827 47.826 0.00 0.00 0.00 3.51
2708 6308 3.194542 GGTTAGATGCTGACTGACTGACT 59.805 47.826 0.00 0.00 0.00 3.41
2709 6309 3.516615 GGTTAGATGCTGACTGACTGAC 58.483 50.000 0.00 0.00 0.00 3.51
2710 6310 2.164422 CGGTTAGATGCTGACTGACTGA 59.836 50.000 0.00 0.00 33.85 3.41
2711 6311 2.534298 CGGTTAGATGCTGACTGACTG 58.466 52.381 0.00 0.00 29.32 3.51
2712 6312 1.134965 GCGGTTAGATGCTGACTGACT 60.135 52.381 2.76 0.00 29.32 3.41
2713 6313 1.281899 GCGGTTAGATGCTGACTGAC 58.718 55.000 2.76 0.00 29.32 3.51
2714 6314 0.179137 CGCGGTTAGATGCTGACTGA 60.179 55.000 0.00 0.00 29.32 3.41
2715 6315 0.179137 TCGCGGTTAGATGCTGACTG 60.179 55.000 6.13 0.00 30.82 3.51
2716 6316 0.530744 TTCGCGGTTAGATGCTGACT 59.469 50.000 6.13 0.00 0.00 3.41
2717 6317 1.571919 ATTCGCGGTTAGATGCTGAC 58.428 50.000 6.13 0.00 0.00 3.51
2718 6318 3.446310 TTATTCGCGGTTAGATGCTGA 57.554 42.857 6.13 0.00 0.00 4.26
2719 6319 4.530094 TTTTATTCGCGGTTAGATGCTG 57.470 40.909 6.13 0.00 0.00 4.41
2720 6320 4.201881 GGTTTTTATTCGCGGTTAGATGCT 60.202 41.667 6.13 0.00 0.00 3.79
2721 6321 4.033019 GGTTTTTATTCGCGGTTAGATGC 58.967 43.478 6.13 0.00 0.00 3.91
2722 6322 5.025826 GTGGTTTTTATTCGCGGTTAGATG 58.974 41.667 6.13 0.00 0.00 2.90
2723 6323 4.939439 AGTGGTTTTTATTCGCGGTTAGAT 59.061 37.500 6.13 0.00 0.00 1.98
2724 6324 4.317488 AGTGGTTTTTATTCGCGGTTAGA 58.683 39.130 6.13 0.00 0.00 2.10
2725 6325 4.673534 AGTGGTTTTTATTCGCGGTTAG 57.326 40.909 6.13 0.00 0.00 2.34
2726 6326 8.436046 AATATAGTGGTTTTTATTCGCGGTTA 57.564 30.769 6.13 0.00 0.00 2.85
2727 6327 6.930667 ATATAGTGGTTTTTATTCGCGGTT 57.069 33.333 6.13 0.00 0.00 4.44
2728 6328 6.539464 TGAATATAGTGGTTTTTATTCGCGGT 59.461 34.615 6.13 0.00 35.01 5.68
2729 6329 6.950545 TGAATATAGTGGTTTTTATTCGCGG 58.049 36.000 6.13 0.00 35.01 6.46
2730 6330 9.525007 GTATGAATATAGTGGTTTTTATTCGCG 57.475 33.333 0.00 0.00 35.01 5.87
2736 6336 9.116067 GGTGCTGTATGAATATAGTGGTTTTTA 57.884 33.333 0.00 0.00 0.00 1.52
2737 6337 7.201696 CGGTGCTGTATGAATATAGTGGTTTTT 60.202 37.037 0.00 0.00 0.00 1.94
2738 6338 6.260050 CGGTGCTGTATGAATATAGTGGTTTT 59.740 38.462 0.00 0.00 0.00 2.43
2739 6339 5.758296 CGGTGCTGTATGAATATAGTGGTTT 59.242 40.000 0.00 0.00 0.00 3.27
2740 6340 5.069914 TCGGTGCTGTATGAATATAGTGGTT 59.930 40.000 0.00 0.00 0.00 3.67
2741 6341 4.587262 TCGGTGCTGTATGAATATAGTGGT 59.413 41.667 0.00 0.00 0.00 4.16
2742 6342 5.134202 TCGGTGCTGTATGAATATAGTGG 57.866 43.478 0.00 0.00 0.00 4.00
2743 6343 6.159293 ACATCGGTGCTGTATGAATATAGTG 58.841 40.000 0.00 0.00 0.00 2.74
2744 6344 6.346477 ACATCGGTGCTGTATGAATATAGT 57.654 37.500 0.00 0.00 0.00 2.12
2745 6345 6.868339 TGAACATCGGTGCTGTATGAATATAG 59.132 38.462 0.00 0.00 0.00 1.31
2746 6346 6.754193 TGAACATCGGTGCTGTATGAATATA 58.246 36.000 0.00 0.00 0.00 0.86
2747 6347 5.610398 TGAACATCGGTGCTGTATGAATAT 58.390 37.500 0.00 0.00 0.00 1.28
2748 6348 5.017294 TGAACATCGGTGCTGTATGAATA 57.983 39.130 0.00 0.00 0.00 1.75
2749 6349 3.872696 TGAACATCGGTGCTGTATGAAT 58.127 40.909 0.00 0.00 0.00 2.57
2750 6350 3.326836 TGAACATCGGTGCTGTATGAA 57.673 42.857 0.00 0.00 0.00 2.57
2751 6351 3.326836 TTGAACATCGGTGCTGTATGA 57.673 42.857 0.00 0.00 0.00 2.15
2752 6352 3.242837 CCATTGAACATCGGTGCTGTATG 60.243 47.826 0.00 0.00 0.00 2.39
2753 6353 2.945008 CCATTGAACATCGGTGCTGTAT 59.055 45.455 0.00 0.00 0.00 2.29
2754 6354 2.290008 ACCATTGAACATCGGTGCTGTA 60.290 45.455 0.00 0.00 0.00 2.74
2755 6355 1.167851 CCATTGAACATCGGTGCTGT 58.832 50.000 0.00 0.00 0.00 4.40
2756 6356 1.167851 ACCATTGAACATCGGTGCTG 58.832 50.000 0.00 0.00 0.00 4.41
2757 6357 1.812571 GAACCATTGAACATCGGTGCT 59.187 47.619 0.00 0.00 0.00 4.40
2758 6358 1.539388 TGAACCATTGAACATCGGTGC 59.461 47.619 0.00 0.00 0.00 5.01
2759 6359 3.761657 CATGAACCATTGAACATCGGTG 58.238 45.455 0.00 0.00 0.00 4.94
2760 6360 2.164219 GCATGAACCATTGAACATCGGT 59.836 45.455 0.00 0.00 0.00 4.69
2761 6361 2.424601 AGCATGAACCATTGAACATCGG 59.575 45.455 0.00 0.00 0.00 4.18
2762 6362 3.770263 AGCATGAACCATTGAACATCG 57.230 42.857 0.00 0.00 0.00 3.84
2763 6363 5.320549 AGAAGCATGAACCATTGAACATC 57.679 39.130 0.00 0.00 0.00 3.06
2764 6364 5.475719 CAAGAAGCATGAACCATTGAACAT 58.524 37.500 0.00 0.00 0.00 2.71
2765 6365 4.262121 CCAAGAAGCATGAACCATTGAACA 60.262 41.667 0.00 0.00 0.00 3.18
2766 6366 4.240096 CCAAGAAGCATGAACCATTGAAC 58.760 43.478 0.00 0.00 0.00 3.18
2767 6367 3.896888 ACCAAGAAGCATGAACCATTGAA 59.103 39.130 0.00 0.00 0.00 2.69
2768 6368 3.256383 CACCAAGAAGCATGAACCATTGA 59.744 43.478 0.00 0.00 0.00 2.57
2769 6369 3.581755 CACCAAGAAGCATGAACCATTG 58.418 45.455 0.00 0.00 0.00 2.82
2770 6370 2.564062 CCACCAAGAAGCATGAACCATT 59.436 45.455 0.00 0.00 0.00 3.16
2771 6371 2.173519 CCACCAAGAAGCATGAACCAT 58.826 47.619 0.00 0.00 0.00 3.55
2772 6372 1.619654 CCACCAAGAAGCATGAACCA 58.380 50.000 0.00 0.00 0.00 3.67
2773 6373 0.244721 GCCACCAAGAAGCATGAACC 59.755 55.000 0.00 0.00 0.00 3.62
2774 6374 1.200948 GAGCCACCAAGAAGCATGAAC 59.799 52.381 0.00 0.00 0.00 3.18
2775 6375 1.074405 AGAGCCACCAAGAAGCATGAA 59.926 47.619 0.00 0.00 0.00 2.57
2776 6376 0.694771 AGAGCCACCAAGAAGCATGA 59.305 50.000 0.00 0.00 0.00 3.07
2777 6377 1.201647 CAAGAGCCACCAAGAAGCATG 59.798 52.381 0.00 0.00 0.00 4.06
2778 6378 1.542492 CAAGAGCCACCAAGAAGCAT 58.458 50.000 0.00 0.00 0.00 3.79
2779 6379 0.538057 CCAAGAGCCACCAAGAAGCA 60.538 55.000 0.00 0.00 0.00 3.91
2780 6380 0.250901 TCCAAGAGCCACCAAGAAGC 60.251 55.000 0.00 0.00 0.00 3.86
2781 6381 2.276732 TTCCAAGAGCCACCAAGAAG 57.723 50.000 0.00 0.00 0.00 2.85
2782 6382 2.746279 TTTCCAAGAGCCACCAAGAA 57.254 45.000 0.00 0.00 0.00 2.52
2783 6383 2.978156 ATTTCCAAGAGCCACCAAGA 57.022 45.000 0.00 0.00 0.00 3.02
2784 6384 4.766891 TCTTTATTTCCAAGAGCCACCAAG 59.233 41.667 0.00 0.00 0.00 3.61
2785 6385 4.735369 TCTTTATTTCCAAGAGCCACCAA 58.265 39.130 0.00 0.00 0.00 3.67
2786 6386 4.380843 TCTTTATTTCCAAGAGCCACCA 57.619 40.909 0.00 0.00 0.00 4.17
2787 6387 6.122964 ACTATCTTTATTTCCAAGAGCCACC 58.877 40.000 0.00 0.00 33.74 4.61
2788 6388 7.631717 AACTATCTTTATTTCCAAGAGCCAC 57.368 36.000 0.00 0.00 33.74 5.01
2789 6389 8.109634 AGAAACTATCTTTATTTCCAAGAGCCA 58.890 33.333 0.00 0.00 33.39 4.75
2790 6390 8.512966 AGAAACTATCTTTATTTCCAAGAGCC 57.487 34.615 0.00 0.00 33.39 4.70
2815 6415 9.630098 CCGAACACTTACAATTACTAGAAACTA 57.370 33.333 0.00 0.00 0.00 2.24
2816 6416 8.362639 TCCGAACACTTACAATTACTAGAAACT 58.637 33.333 0.00 0.00 0.00 2.66
2817 6417 8.524870 TCCGAACACTTACAATTACTAGAAAC 57.475 34.615 0.00 0.00 0.00 2.78
2818 6418 9.545105 TTTCCGAACACTTACAATTACTAGAAA 57.455 29.630 0.00 0.00 0.00 2.52
2819 6419 9.715121 ATTTCCGAACACTTACAATTACTAGAA 57.285 29.630 0.00 0.00 0.00 2.10
2828 6428 9.715121 ACTATCTTTATTTCCGAACACTTACAA 57.285 29.630 0.00 0.00 0.00 2.41
2829 6429 9.715121 AACTATCTTTATTTCCGAACACTTACA 57.285 29.630 0.00 0.00 0.00 2.41
2870 6470 9.598517 AACTATTCTTTTGCTGTCATTTCAAAA 57.401 25.926 0.00 0.00 37.36 2.44
2871 6471 9.598517 AAACTATTCTTTTGCTGTCATTTCAAA 57.401 25.926 0.00 0.00 0.00 2.69
2872 6472 9.248291 GAAACTATTCTTTTGCTGTCATTTCAA 57.752 29.630 0.00 0.00 32.57 2.69
2873 6473 8.632679 AGAAACTATTCTTTTGCTGTCATTTCA 58.367 29.630 0.00 0.00 43.43 2.69
2876 6476 9.289782 ACTAGAAACTATTCTTTTGCTGTCATT 57.710 29.630 0.00 0.00 43.43 2.57
2877 6477 8.854614 ACTAGAAACTATTCTTTTGCTGTCAT 57.145 30.769 0.00 0.00 43.43 3.06
2878 6478 9.772973 TTACTAGAAACTATTCTTTTGCTGTCA 57.227 29.630 0.00 0.00 43.43 3.58
2889 6489 8.704234 CGAGGCATCAATTACTAGAAACTATTC 58.296 37.037 0.00 0.00 35.70 1.75
2890 6490 7.171678 GCGAGGCATCAATTACTAGAAACTATT 59.828 37.037 0.00 0.00 0.00 1.73
2891 6491 6.647067 GCGAGGCATCAATTACTAGAAACTAT 59.353 38.462 0.00 0.00 0.00 2.12
2892 6492 5.983720 GCGAGGCATCAATTACTAGAAACTA 59.016 40.000 0.00 0.00 0.00 2.24
2893 6493 4.811557 GCGAGGCATCAATTACTAGAAACT 59.188 41.667 0.00 0.00 0.00 2.66
2894 6494 4.811557 AGCGAGGCATCAATTACTAGAAAC 59.188 41.667 0.00 0.00 0.00 2.78
2895 6495 5.023533 AGCGAGGCATCAATTACTAGAAA 57.976 39.130 0.00 0.00 0.00 2.52
2896 6496 4.672587 AGCGAGGCATCAATTACTAGAA 57.327 40.909 0.00 0.00 0.00 2.10
2897 6497 4.022242 GGTAGCGAGGCATCAATTACTAGA 60.022 45.833 0.00 0.00 0.00 2.43
2898 6498 4.238514 GGTAGCGAGGCATCAATTACTAG 58.761 47.826 0.00 0.00 0.00 2.57
2899 6499 3.639561 TGGTAGCGAGGCATCAATTACTA 59.360 43.478 0.00 0.00 0.00 1.82
2900 6500 2.434336 TGGTAGCGAGGCATCAATTACT 59.566 45.455 0.00 0.00 0.00 2.24
2901 6501 2.833794 TGGTAGCGAGGCATCAATTAC 58.166 47.619 0.00 0.00 0.00 1.89
2902 6502 3.402110 CATGGTAGCGAGGCATCAATTA 58.598 45.455 0.00 0.00 0.00 1.40
2903 6503 2.224606 CATGGTAGCGAGGCATCAATT 58.775 47.619 0.00 0.00 0.00 2.32
2904 6504 1.544093 CCATGGTAGCGAGGCATCAAT 60.544 52.381 2.57 0.00 0.00 2.57
2905 6505 0.179048 CCATGGTAGCGAGGCATCAA 60.179 55.000 2.57 0.00 0.00 2.57
2906 6506 1.337384 ACCATGGTAGCGAGGCATCA 61.337 55.000 18.10 0.00 0.00 3.07
2907 6507 0.179045 AACCATGGTAGCGAGGCATC 60.179 55.000 20.12 0.00 0.00 3.91
2908 6508 1.070758 CTAACCATGGTAGCGAGGCAT 59.929 52.381 20.12 0.84 0.00 4.40
2909 6509 0.464036 CTAACCATGGTAGCGAGGCA 59.536 55.000 20.12 0.00 0.00 4.75
2910 6510 0.464452 ACTAACCATGGTAGCGAGGC 59.536 55.000 20.12 0.00 0.00 4.70
2911 6511 2.981859 AACTAACCATGGTAGCGAGG 57.018 50.000 20.12 7.39 0.00 4.63
2912 6512 4.693566 TGAAAAACTAACCATGGTAGCGAG 59.306 41.667 20.12 15.18 0.00 5.03
2913 6513 4.643463 TGAAAAACTAACCATGGTAGCGA 58.357 39.130 20.12 3.08 0.00 4.93
2914 6514 5.365403 TTGAAAAACTAACCATGGTAGCG 57.635 39.130 20.12 11.93 0.00 4.26
2915 6515 7.968405 CACTATTGAAAAACTAACCATGGTAGC 59.032 37.037 20.12 2.29 0.00 3.58
2916 6516 7.968405 GCACTATTGAAAAACTAACCATGGTAG 59.032 37.037 20.12 17.28 0.00 3.18
2917 6517 7.448777 TGCACTATTGAAAAACTAACCATGGTA 59.551 33.333 20.12 5.85 0.00 3.25
2918 6518 6.266558 TGCACTATTGAAAAACTAACCATGGT 59.733 34.615 13.00 13.00 0.00 3.55
2919 6519 6.686630 TGCACTATTGAAAAACTAACCATGG 58.313 36.000 11.19 11.19 0.00 3.66
2920 6520 7.592938 TCTGCACTATTGAAAAACTAACCATG 58.407 34.615 0.00 0.00 0.00 3.66
2921 6521 7.759489 TCTGCACTATTGAAAAACTAACCAT 57.241 32.000 0.00 0.00 0.00 3.55
2922 6522 7.575414 TTCTGCACTATTGAAAAACTAACCA 57.425 32.000 0.00 0.00 0.00 3.67
2923 6523 8.915654 CATTTCTGCACTATTGAAAAACTAACC 58.084 33.333 2.62 0.00 34.09 2.85
2942 6542 8.075574 TGTTAAGATTGTGTGTAAGCATTTCTG 58.924 33.333 0.00 0.00 0.00 3.02
2943 6543 8.165239 TGTTAAGATTGTGTGTAAGCATTTCT 57.835 30.769 0.00 0.00 0.00 2.52
2944 6544 8.076178 ACTGTTAAGATTGTGTGTAAGCATTTC 58.924 33.333 0.00 0.00 0.00 2.17
2945 6545 7.940850 ACTGTTAAGATTGTGTGTAAGCATTT 58.059 30.769 0.00 0.00 0.00 2.32
2946 6546 7.510549 ACTGTTAAGATTGTGTGTAAGCATT 57.489 32.000 0.00 0.00 0.00 3.56
2947 6547 7.148407 GCTACTGTTAAGATTGTGTGTAAGCAT 60.148 37.037 0.00 0.00 0.00 3.79
2948 6548 6.147164 GCTACTGTTAAGATTGTGTGTAAGCA 59.853 38.462 0.00 0.00 0.00 3.91
2949 6549 6.534934 GCTACTGTTAAGATTGTGTGTAAGC 58.465 40.000 0.00 0.00 0.00 3.09
2950 6550 6.669977 GCGCTACTGTTAAGATTGTGTGTAAG 60.670 42.308 0.00 0.00 0.00 2.34
2951 6551 5.119588 GCGCTACTGTTAAGATTGTGTGTAA 59.880 40.000 0.00 0.00 0.00 2.41
2952 6552 4.624024 GCGCTACTGTTAAGATTGTGTGTA 59.376 41.667 0.00 0.00 0.00 2.90
2953 6553 3.432252 GCGCTACTGTTAAGATTGTGTGT 59.568 43.478 0.00 0.00 0.00 3.72
2954 6554 3.481951 CGCGCTACTGTTAAGATTGTGTG 60.482 47.826 5.56 0.00 0.00 3.82
2955 6555 2.666508 CGCGCTACTGTTAAGATTGTGT 59.333 45.455 5.56 0.00 0.00 3.72
2956 6556 2.666508 ACGCGCTACTGTTAAGATTGTG 59.333 45.455 5.73 0.00 0.00 3.33
2957 6557 2.921754 GACGCGCTACTGTTAAGATTGT 59.078 45.455 5.73 0.00 0.00 2.71
2958 6558 2.921121 TGACGCGCTACTGTTAAGATTG 59.079 45.455 5.73 0.00 0.00 2.67
2959 6559 3.226346 TGACGCGCTACTGTTAAGATT 57.774 42.857 5.73 0.00 0.00 2.40
2960 6560 2.933495 TGACGCGCTACTGTTAAGAT 57.067 45.000 5.73 0.00 0.00 2.40
2961 6561 2.933495 ATGACGCGCTACTGTTAAGA 57.067 45.000 5.73 0.00 0.00 2.10
2962 6562 3.991605 AAATGACGCGCTACTGTTAAG 57.008 42.857 5.73 0.00 0.00 1.85
2963 6563 4.735662 AAAAATGACGCGCTACTGTTAA 57.264 36.364 5.73 0.00 0.00 2.01
2981 6581 2.297597 CCCCAGTGGCGTGAATTAAAAA 59.702 45.455 2.61 0.00 0.00 1.94
2982 6582 1.889829 CCCCAGTGGCGTGAATTAAAA 59.110 47.619 2.61 0.00 0.00 1.52
2983 6583 1.202952 ACCCCAGTGGCGTGAATTAAA 60.203 47.619 2.61 0.00 37.83 1.52
2984 6584 0.402504 ACCCCAGTGGCGTGAATTAA 59.597 50.000 2.61 0.00 37.83 1.40
2985 6585 0.402504 AACCCCAGTGGCGTGAATTA 59.597 50.000 2.61 0.00 37.83 1.40
2986 6586 0.893727 GAACCCCAGTGGCGTGAATT 60.894 55.000 2.61 0.00 37.83 2.17
2987 6587 1.303317 GAACCCCAGTGGCGTGAAT 60.303 57.895 2.61 0.00 37.83 2.57
2988 6588 2.112297 GAACCCCAGTGGCGTGAA 59.888 61.111 2.61 0.00 37.83 3.18
2989 6589 3.164977 TGAACCCCAGTGGCGTGA 61.165 61.111 2.61 0.00 37.83 4.35
2990 6590 2.669569 CTGAACCCCAGTGGCGTG 60.670 66.667 2.61 0.00 38.10 5.34
2991 6591 4.643387 GCTGAACCCCAGTGGCGT 62.643 66.667 2.61 0.00 44.71 5.68
2992 6592 4.335647 AGCTGAACCCCAGTGGCG 62.336 66.667 2.61 0.00 44.71 5.69
2993 6593 2.360475 GAGCTGAACCCCAGTGGC 60.360 66.667 2.61 0.00 44.71 5.01
2994 6594 2.190488 GAGGAGCTGAACCCCAGTGG 62.190 65.000 0.63 0.63 44.71 4.00
2995 6595 1.197430 AGAGGAGCTGAACCCCAGTG 61.197 60.000 0.00 0.00 44.71 3.66
2996 6596 1.159664 AGAGGAGCTGAACCCCAGT 59.840 57.895 0.00 0.00 44.71 4.00
2997 6597 4.143740 AGAGGAGCTGAACCCCAG 57.856 61.111 0.00 0.00 45.67 4.45
3006 6606 1.974236 ACACTTAACTGCAGAGGAGCT 59.026 47.619 23.35 0.00 34.99 4.09
3035 6635 2.725637 TCGTACATGCTACTGTACCCA 58.274 47.619 14.80 4.29 45.63 4.51
3038 6638 3.552541 CCGATCGTACATGCTACTGTAC 58.447 50.000 15.09 12.11 45.18 2.90
3125 6726 9.547753 GTCTATATTTTCTTTCCAGTGAGCATA 57.452 33.333 0.00 0.00 0.00 3.14
3131 6732 6.346096 TCCGGTCTATATTTTCTTTCCAGTG 58.654 40.000 0.00 0.00 0.00 3.66
3308 6909 1.010935 CAGCTTGTCATCGTCGTGCT 61.011 55.000 0.00 0.00 0.00 4.40
3309 6910 1.417592 CAGCTTGTCATCGTCGTGC 59.582 57.895 0.00 0.00 0.00 5.34
3310 6911 0.388520 TCCAGCTTGTCATCGTCGTG 60.389 55.000 0.00 0.00 0.00 4.35
3311 6912 0.109086 CTCCAGCTTGTCATCGTCGT 60.109 55.000 0.00 0.00 0.00 4.34
3312 6913 0.803768 CCTCCAGCTTGTCATCGTCG 60.804 60.000 0.00 0.00 0.00 5.12
3314 6915 1.078848 GCCTCCAGCTTGTCATCGT 60.079 57.895 0.00 0.00 38.99 3.73
3315 6916 3.805267 GCCTCCAGCTTGTCATCG 58.195 61.111 0.00 0.00 38.99 3.84
3324 6925 3.077556 TCGGAAGGAGCCTCCAGC 61.078 66.667 14.46 3.81 39.61 4.85
3327 6928 2.128507 ATCGTCGGAAGGAGCCTCC 61.129 63.158 1.26 1.26 36.58 4.30
3328 6929 1.066587 CATCGTCGGAAGGAGCCTC 59.933 63.158 0.00 0.00 0.00 4.70
3330 6931 1.227002 GTCATCGTCGGAAGGAGCC 60.227 63.158 0.00 0.00 0.00 4.70
3332 6933 1.914634 CTTGTCATCGTCGGAAGGAG 58.085 55.000 0.00 0.00 0.00 3.69
3333 6934 0.108804 GCTTGTCATCGTCGGAAGGA 60.109 55.000 0.00 0.00 0.00 3.36
3335 6936 0.994995 CAGCTTGTCATCGTCGGAAG 59.005 55.000 0.00 0.00 0.00 3.46
3336 6937 0.389817 CCAGCTTGTCATCGTCGGAA 60.390 55.000 0.00 0.00 0.00 4.30
3337 6938 1.215382 CCAGCTTGTCATCGTCGGA 59.785 57.895 0.00 0.00 0.00 4.55
3338 6939 0.803768 CTCCAGCTTGTCATCGTCGG 60.804 60.000 0.00 0.00 0.00 4.79
3398 6999 1.227089 CGTGCTCTTCCCCTCATCG 60.227 63.158 0.00 0.00 0.00 3.84
3525 7126 2.747855 GGAGTTTGGCCGAGCAGG 60.748 66.667 9.82 0.00 44.97 4.85
3531 7132 1.302832 AGCTTGAGGAGTTTGGCCG 60.303 57.895 0.00 0.00 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.