Multiple sequence alignment - TraesCS3D01G503300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G503300 chr3D 100.000 3558 0 0 1 3558 591255569 591252012 0.000000e+00 6571.0
1 TraesCS3D01G503300 chr3D 95.286 1103 51 1 1 1102 323088089 323089191 0.000000e+00 1748.0
2 TraesCS3D01G503300 chr3D 97.003 634 9 3 2935 3558 539699191 539699824 0.000000e+00 1057.0
3 TraesCS3D01G503300 chr3D 96.386 332 11 1 2606 2936 472074939 472075270 2.420000e-151 545.0
4 TraesCS3D01G503300 chr3A 93.294 1372 62 8 1256 2604 721593765 721592401 0.000000e+00 1997.0
5 TraesCS3D01G503300 chr3B 92.083 1162 83 4 1434 2587 793128306 793129466 0.000000e+00 1628.0
6 TraesCS3D01G503300 chr3B 90.558 1112 94 5 1 1102 766334538 766335648 0.000000e+00 1461.0
7 TraesCS3D01G503300 chr3B 79.630 486 93 6 620 1102 738641297 738640815 9.460000e-91 344.0
8 TraesCS3D01G503300 chr3B 90.547 201 17 2 1229 1429 793124751 793124949 7.570000e-67 265.0
9 TraesCS3D01G503300 chr3B 98.095 105 2 0 1100 1204 793118495 793118599 2.180000e-42 183.0
10 TraesCS3D01G503300 chr1A 92.825 1101 78 1 1 1100 498586889 498587989 0.000000e+00 1594.0
11 TraesCS3D01G503300 chr1A 96.386 332 11 1 2606 2936 147500058 147500389 2.420000e-151 545.0
12 TraesCS3D01G503300 chr4D 92.393 907 67 2 1 905 459582611 459581705 0.000000e+00 1291.0
13 TraesCS3D01G503300 chr4D 96.364 330 11 1 2608 2936 340698447 340698118 3.120000e-150 542.0
14 TraesCS3D01G503300 chr4D 88.670 203 23 0 900 1102 459571303 459571101 7.630000e-62 248.0
15 TraesCS3D01G503300 chr6D 96.144 752 28 1 352 1102 10017602 10018353 0.000000e+00 1227.0
16 TraesCS3D01G503300 chr6D 96.667 330 10 1 2608 2936 95812458 95812129 6.720000e-152 547.0
17 TraesCS3D01G503300 chr6D 96.364 330 11 1 2608 2936 430630584 430630255 3.120000e-150 542.0
18 TraesCS3D01G503300 chr6D 96.364 330 11 1 2608 2936 453134475 453134804 3.120000e-150 542.0
19 TraesCS3D01G503300 chr6D 96.377 138 5 0 1 138 10017468 10017605 9.940000e-56 228.0
20 TraesCS3D01G503300 chr5D 96.994 632 9 3 2937 3558 42972867 42972236 0.000000e+00 1053.0
21 TraesCS3D01G503300 chr5D 96.994 632 9 2 2937 3558 541866841 541867472 0.000000e+00 1053.0
22 TraesCS3D01G503300 chr7D 96.835 632 8 3 2936 3558 612013069 612012441 0.000000e+00 1046.0
23 TraesCS3D01G503300 chr7D 96.226 636 10 4 2937 3558 606104800 606104165 0.000000e+00 1029.0
24 TraesCS3D01G503300 chr7D 96.063 635 16 3 2933 3558 39753274 39753908 0.000000e+00 1026.0
25 TraesCS3D01G503300 chr7D 95.906 635 17 3 2933 3558 39765726 39765092 0.000000e+00 1020.0
26 TraesCS3D01G503300 chr7D 83.062 1104 180 7 3 1102 597886590 597885490 0.000000e+00 996.0
27 TraesCS3D01G503300 chr7D 96.364 330 11 1 2608 2936 21736746 21737075 3.120000e-150 542.0
28 TraesCS3D01G503300 chr2D 96.262 642 13 6 2928 3558 633867095 633867736 0.000000e+00 1042.0
29 TraesCS3D01G503300 chr2D 95.893 633 14 6 2936 3558 10628374 10629004 0.000000e+00 1014.0
30 TraesCS3D01G503300 chr6A 96.375 331 9 3 2608 2936 73926465 73926794 3.120000e-150 542.0
31 TraesCS3D01G503300 chr5A 96.636 327 10 1 2608 2933 642855552 642855878 3.120000e-150 542.0
32 TraesCS3D01G503300 chr5B 85.315 143 4 4 3433 3558 707081740 707081598 8.010000e-27 132.0
33 TraesCS3D01G503300 chrUn 85.211 142 4 7 3434 3558 9324206 9324347 2.880000e-26 130.0
34 TraesCS3D01G503300 chr4B 85.315 143 2 7 3435 3558 610228244 610228386 2.880000e-26 130.0
35 TraesCS3D01G503300 chr1B 84.286 140 4 9 3434 3558 399802041 399802177 1.730000e-23 121.0
36 TraesCS3D01G503300 chr2B 71.898 274 64 13 522 788 412740072 412739805 2.290000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G503300 chr3D 591252012 591255569 3557 True 6571.0 6571 100.0000 1 3558 1 chr3D.!!$R1 3557
1 TraesCS3D01G503300 chr3D 323088089 323089191 1102 False 1748.0 1748 95.2860 1 1102 1 chr3D.!!$F1 1101
2 TraesCS3D01G503300 chr3D 539699191 539699824 633 False 1057.0 1057 97.0030 2935 3558 1 chr3D.!!$F3 623
3 TraesCS3D01G503300 chr3A 721592401 721593765 1364 True 1997.0 1997 93.2940 1256 2604 1 chr3A.!!$R1 1348
4 TraesCS3D01G503300 chr3B 766334538 766335648 1110 False 1461.0 1461 90.5580 1 1102 1 chr3B.!!$F1 1101
5 TraesCS3D01G503300 chr3B 793124751 793129466 4715 False 946.5 1628 91.3150 1229 2587 2 chr3B.!!$F3 1358
6 TraesCS3D01G503300 chr1A 498586889 498587989 1100 False 1594.0 1594 92.8250 1 1100 1 chr1A.!!$F2 1099
7 TraesCS3D01G503300 chr4D 459581705 459582611 906 True 1291.0 1291 92.3930 1 905 1 chr4D.!!$R3 904
8 TraesCS3D01G503300 chr6D 10017468 10018353 885 False 727.5 1227 96.2605 1 1102 2 chr6D.!!$F2 1101
9 TraesCS3D01G503300 chr5D 42972236 42972867 631 True 1053.0 1053 96.9940 2937 3558 1 chr5D.!!$R1 621
10 TraesCS3D01G503300 chr5D 541866841 541867472 631 False 1053.0 1053 96.9940 2937 3558 1 chr5D.!!$F1 621
11 TraesCS3D01G503300 chr7D 612012441 612013069 628 True 1046.0 1046 96.8350 2936 3558 1 chr7D.!!$R4 622
12 TraesCS3D01G503300 chr7D 606104165 606104800 635 True 1029.0 1029 96.2260 2937 3558 1 chr7D.!!$R3 621
13 TraesCS3D01G503300 chr7D 39753274 39753908 634 False 1026.0 1026 96.0630 2933 3558 1 chr7D.!!$F2 625
14 TraesCS3D01G503300 chr7D 39765092 39765726 634 True 1020.0 1020 95.9060 2933 3558 1 chr7D.!!$R1 625
15 TraesCS3D01G503300 chr7D 597885490 597886590 1100 True 996.0 996 83.0620 3 1102 1 chr7D.!!$R2 1099
16 TraesCS3D01G503300 chr2D 633867095 633867736 641 False 1042.0 1042 96.2620 2928 3558 1 chr2D.!!$F2 630
17 TraesCS3D01G503300 chr2D 10628374 10629004 630 False 1014.0 1014 95.8930 2936 3558 1 chr2D.!!$F1 622

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
378 605 0.771127 CCCTTCCACTCCTCCACAAA 59.229 55.0 0.0 0.0 0.0 2.83 F
1183 1412 0.108329 AGCGACCAGTTTGTATCCGG 60.108 55.0 0.0 0.0 0.0 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1219 1448 0.033504 CGTGAGCCGGCAGGTATATT 59.966 55.0 31.54 4.27 40.5 1.28 R
2751 6363 0.037605 CTCCTTTAACACGGGCGAGT 60.038 55.0 0.00 0.00 0.0 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 91 5.467399 CCCTGTTATCAAGTTCAACGTGTAA 59.533 40.000 3.25 0.06 0.00 2.41
218 219 1.341080 AAAAGCCCCATTGTGGTCTG 58.659 50.000 0.00 0.00 35.17 3.51
232 233 3.135712 TGTGGTCTGTCAATACAACACCT 59.864 43.478 0.00 0.00 38.59 4.00
236 237 3.753272 GTCTGTCAATACAACACCTGCAT 59.247 43.478 0.00 0.00 34.49 3.96
330 340 5.116180 CCATCTCACTCGTAAATTTGGCTA 58.884 41.667 0.00 0.00 0.00 3.93
378 605 0.771127 CCCTTCCACTCCTCCACAAA 59.229 55.000 0.00 0.00 0.00 2.83
389 616 2.564062 TCCTCCACAAACCTTACTACCG 59.436 50.000 0.00 0.00 0.00 4.02
485 713 1.212688 TGGATTGGATCATCACGGCTT 59.787 47.619 0.00 0.00 0.00 4.35
584 812 2.751018 TCGCCACCGAAATTCCCA 59.249 55.556 0.00 0.00 41.17 4.37
716 945 4.489810 CTTCTTCGCTGTAACTCATGTCT 58.510 43.478 0.00 0.00 0.00 3.41
726 955 6.096673 TGTAACTCATGTCTAACAGCAAGA 57.903 37.500 0.00 0.00 0.00 3.02
993 1222 3.891366 TCGCATCATCCTGAGAGAACATA 59.109 43.478 0.00 0.00 0.00 2.29
1038 1267 2.431057 CCTTGTGCCCGAGTTATCTAGT 59.569 50.000 0.00 0.00 0.00 2.57
1067 1296 0.840722 ACCTTTGTGACTCCCGGGAT 60.841 55.000 27.07 14.74 0.00 3.85
1102 1331 1.227943 GGTGTCAAGCTGCCACTCA 60.228 57.895 9.66 0.00 0.00 3.41
1103 1332 1.233285 GGTGTCAAGCTGCCACTCAG 61.233 60.000 9.66 0.00 45.62 3.35
1104 1333 0.533755 GTGTCAAGCTGCCACTCAGT 60.534 55.000 0.00 0.00 44.66 3.41
1105 1334 0.533531 TGTCAAGCTGCCACTCAGTG 60.534 55.000 0.00 0.00 44.66 3.66
1106 1335 0.533755 GTCAAGCTGCCACTCAGTGT 60.534 55.000 3.56 0.00 44.66 3.55
1107 1336 1.047801 TCAAGCTGCCACTCAGTGTA 58.952 50.000 3.56 0.00 44.66 2.90
1108 1337 1.001293 TCAAGCTGCCACTCAGTGTAG 59.999 52.381 3.56 3.03 44.66 2.74
1109 1338 1.051812 AAGCTGCCACTCAGTGTAGT 58.948 50.000 3.56 0.00 44.66 2.73
1110 1339 1.924731 AGCTGCCACTCAGTGTAGTA 58.075 50.000 3.56 0.00 44.66 1.82
1111 1340 1.546476 AGCTGCCACTCAGTGTAGTAC 59.454 52.381 3.56 0.00 44.66 2.73
1112 1341 1.732732 GCTGCCACTCAGTGTAGTACG 60.733 57.143 3.56 0.00 44.66 3.67
1113 1342 1.540267 CTGCCACTCAGTGTAGTACGT 59.460 52.381 3.56 0.00 38.02 3.57
1114 1343 1.268625 TGCCACTCAGTGTAGTACGTG 59.731 52.381 3.56 0.00 0.00 4.49
1115 1344 1.978542 CCACTCAGTGTAGTACGTGC 58.021 55.000 3.56 0.00 0.00 5.34
1116 1345 1.603293 CACTCAGTGTAGTACGTGCG 58.397 55.000 0.00 0.00 0.00 5.34
1117 1346 1.196127 CACTCAGTGTAGTACGTGCGA 59.804 52.381 0.00 0.00 0.00 5.10
1118 1347 2.082231 ACTCAGTGTAGTACGTGCGAT 58.918 47.619 0.00 0.00 0.00 4.58
1119 1348 2.486982 ACTCAGTGTAGTACGTGCGATT 59.513 45.455 0.00 0.00 0.00 3.34
1120 1349 3.057736 ACTCAGTGTAGTACGTGCGATTT 60.058 43.478 0.00 0.00 0.00 2.17
1121 1350 3.239254 TCAGTGTAGTACGTGCGATTTG 58.761 45.455 0.00 0.00 0.00 2.32
1122 1351 2.344441 CAGTGTAGTACGTGCGATTTGG 59.656 50.000 0.00 0.00 0.00 3.28
1123 1352 2.229543 AGTGTAGTACGTGCGATTTGGA 59.770 45.455 0.00 0.00 0.00 3.53
1124 1353 2.597305 GTGTAGTACGTGCGATTTGGAG 59.403 50.000 0.00 0.00 0.00 3.86
1125 1354 2.229543 TGTAGTACGTGCGATTTGGAGT 59.770 45.455 0.00 0.00 0.00 3.85
1126 1355 1.992170 AGTACGTGCGATTTGGAGTC 58.008 50.000 0.00 0.00 0.00 3.36
1127 1356 0.638746 GTACGTGCGATTTGGAGTCG 59.361 55.000 0.00 0.00 41.77 4.18
1128 1357 0.457166 TACGTGCGATTTGGAGTCGG 60.457 55.000 0.00 0.00 39.38 4.79
1129 1358 1.736645 CGTGCGATTTGGAGTCGGT 60.737 57.895 0.00 0.00 39.38 4.69
1130 1359 1.289109 CGTGCGATTTGGAGTCGGTT 61.289 55.000 0.00 0.00 39.38 4.44
1131 1360 0.442699 GTGCGATTTGGAGTCGGTTC 59.557 55.000 0.00 0.00 39.38 3.62
1132 1361 0.672401 TGCGATTTGGAGTCGGTTCC 60.672 55.000 0.00 0.00 39.38 3.62
1133 1362 1.693083 GCGATTTGGAGTCGGTTCCG 61.693 60.000 4.74 4.74 40.27 4.30
1134 1363 0.108992 CGATTTGGAGTCGGTTCCGA 60.109 55.000 10.00 10.00 40.27 4.55
1135 1364 1.470979 CGATTTGGAGTCGGTTCCGAT 60.471 52.381 16.87 6.56 40.27 4.18
1136 1365 2.223641 CGATTTGGAGTCGGTTCCGATA 60.224 50.000 16.87 2.42 40.27 2.92
1137 1366 2.953466 TTTGGAGTCGGTTCCGATAG 57.047 50.000 16.87 0.00 40.27 2.08
1155 1384 6.701432 CGATAGGTCGTGTTAGAAAAACTT 57.299 37.500 0.00 0.00 42.78 2.66
1156 1385 7.113704 CGATAGGTCGTGTTAGAAAAACTTT 57.886 36.000 0.00 0.00 42.78 2.66
1157 1386 7.225397 CGATAGGTCGTGTTAGAAAAACTTTC 58.775 38.462 0.00 0.00 42.78 2.62
1158 1387 5.746307 AGGTCGTGTTAGAAAAACTTTCC 57.254 39.130 0.00 0.00 0.00 3.13
1159 1388 5.187687 AGGTCGTGTTAGAAAAACTTTCCA 58.812 37.500 0.00 0.00 0.00 3.53
1160 1389 5.296035 AGGTCGTGTTAGAAAAACTTTCCAG 59.704 40.000 0.00 0.00 0.00 3.86
1161 1390 5.295045 GGTCGTGTTAGAAAAACTTTCCAGA 59.705 40.000 0.00 0.00 0.00 3.86
1162 1391 6.190264 GTCGTGTTAGAAAAACTTTCCAGAC 58.810 40.000 0.00 0.00 0.00 3.51
1163 1392 5.875910 TCGTGTTAGAAAAACTTTCCAGACA 59.124 36.000 0.00 0.00 0.00 3.41
1164 1393 6.372103 TCGTGTTAGAAAAACTTTCCAGACAA 59.628 34.615 0.00 0.00 0.00 3.18
1165 1394 6.687105 CGTGTTAGAAAAACTTTCCAGACAAG 59.313 38.462 0.00 0.00 0.00 3.16
1166 1395 6.472486 GTGTTAGAAAAACTTTCCAGACAAGC 59.528 38.462 0.00 0.00 0.00 4.01
1167 1396 4.292977 AGAAAAACTTTCCAGACAAGCG 57.707 40.909 0.00 0.00 0.00 4.68
1168 1397 3.945285 AGAAAAACTTTCCAGACAAGCGA 59.055 39.130 0.00 0.00 0.00 4.93
1169 1398 3.692791 AAAACTTTCCAGACAAGCGAC 57.307 42.857 0.00 0.00 0.00 5.19
1170 1399 1.594331 AACTTTCCAGACAAGCGACC 58.406 50.000 0.00 0.00 0.00 4.79
1171 1400 0.468226 ACTTTCCAGACAAGCGACCA 59.532 50.000 0.00 0.00 0.00 4.02
1172 1401 1.151668 CTTTCCAGACAAGCGACCAG 58.848 55.000 0.00 0.00 0.00 4.00
1173 1402 0.468226 TTTCCAGACAAGCGACCAGT 59.532 50.000 0.00 0.00 0.00 4.00
1174 1403 0.468226 TTCCAGACAAGCGACCAGTT 59.532 50.000 0.00 0.00 0.00 3.16
1175 1404 0.468226 TCCAGACAAGCGACCAGTTT 59.532 50.000 0.00 0.00 0.00 2.66
1176 1405 0.588252 CCAGACAAGCGACCAGTTTG 59.412 55.000 0.00 0.00 45.08 2.93
1182 1411 1.393539 CAAGCGACCAGTTTGTATCCG 59.606 52.381 0.00 0.00 36.48 4.18
1183 1412 0.108329 AGCGACCAGTTTGTATCCGG 60.108 55.000 0.00 0.00 0.00 5.14
1184 1413 0.108520 GCGACCAGTTTGTATCCGGA 60.109 55.000 6.61 6.61 0.00 5.14
1185 1414 1.472728 GCGACCAGTTTGTATCCGGAT 60.473 52.381 22.95 22.95 0.00 4.18
1186 1415 2.470821 CGACCAGTTTGTATCCGGATC 58.529 52.381 23.08 13.29 0.00 3.36
1187 1416 2.802057 CGACCAGTTTGTATCCGGATCC 60.802 54.545 23.08 10.84 0.00 3.36
1188 1417 2.169769 GACCAGTTTGTATCCGGATCCA 59.830 50.000 23.08 14.06 0.00 3.41
1189 1418 2.574369 ACCAGTTTGTATCCGGATCCAA 59.426 45.455 23.08 20.04 0.00 3.53
1190 1419 2.943033 CCAGTTTGTATCCGGATCCAAC 59.057 50.000 23.08 20.44 0.00 3.77
1191 1420 3.370527 CCAGTTTGTATCCGGATCCAACT 60.371 47.826 23.08 22.23 0.00 3.16
1192 1421 3.871594 CAGTTTGTATCCGGATCCAACTC 59.128 47.826 23.08 16.51 0.00 3.01
1193 1422 3.118371 AGTTTGTATCCGGATCCAACTCC 60.118 47.826 23.08 12.06 0.00 3.85
1194 1423 2.168458 TGTATCCGGATCCAACTCCA 57.832 50.000 23.08 4.69 34.78 3.86
1195 1424 2.473070 TGTATCCGGATCCAACTCCAA 58.527 47.619 23.08 0.00 34.78 3.53
1196 1425 3.045634 TGTATCCGGATCCAACTCCAAT 58.954 45.455 23.08 0.00 34.78 3.16
1197 1426 2.938956 ATCCGGATCCAACTCCAATC 57.061 50.000 12.38 0.00 34.78 2.67
1198 1427 0.464036 TCCGGATCCAACTCCAATCG 59.536 55.000 13.41 0.00 34.78 3.34
1199 1428 0.464036 CCGGATCCAACTCCAATCGA 59.536 55.000 13.41 0.00 34.78 3.59
1200 1429 1.070758 CCGGATCCAACTCCAATCGAT 59.929 52.381 13.41 0.00 34.78 3.59
1201 1430 2.485479 CCGGATCCAACTCCAATCGATT 60.485 50.000 13.41 4.39 34.78 3.34
1202 1431 2.545526 CGGATCCAACTCCAATCGATTG 59.454 50.000 27.66 27.66 34.78 2.67
1203 1432 3.545703 GGATCCAACTCCAATCGATTGT 58.454 45.455 30.71 14.44 36.06 2.71
1204 1433 4.703897 GGATCCAACTCCAATCGATTGTA 58.296 43.478 30.71 18.67 36.06 2.41
1205 1434 4.511826 GGATCCAACTCCAATCGATTGTAC 59.488 45.833 30.71 11.59 36.06 2.90
1206 1435 4.819105 TCCAACTCCAATCGATTGTACT 57.181 40.909 30.71 13.50 36.06 2.73
1207 1436 4.755411 TCCAACTCCAATCGATTGTACTC 58.245 43.478 30.71 0.00 36.06 2.59
1208 1437 4.466370 TCCAACTCCAATCGATTGTACTCT 59.534 41.667 30.71 12.68 36.06 3.24
1209 1438 5.655090 TCCAACTCCAATCGATTGTACTCTA 59.345 40.000 30.71 12.20 36.06 2.43
1210 1439 5.749109 CCAACTCCAATCGATTGTACTCTAC 59.251 44.000 30.71 0.00 36.06 2.59
1211 1440 6.330278 CAACTCCAATCGATTGTACTCTACA 58.670 40.000 30.71 8.22 36.06 2.74
1212 1441 6.716934 ACTCCAATCGATTGTACTCTACAT 57.283 37.500 30.71 8.06 38.68 2.29
1213 1442 7.818997 ACTCCAATCGATTGTACTCTACATA 57.181 36.000 30.71 7.34 38.68 2.29
1214 1443 8.410673 ACTCCAATCGATTGTACTCTACATAT 57.589 34.615 30.71 5.69 38.68 1.78
1215 1444 8.516234 ACTCCAATCGATTGTACTCTACATATC 58.484 37.037 30.71 0.00 38.68 1.63
1216 1445 8.404107 TCCAATCGATTGTACTCTACATATCA 57.596 34.615 30.71 0.88 38.68 2.15
1217 1446 8.856103 TCCAATCGATTGTACTCTACATATCAA 58.144 33.333 30.71 1.14 38.68 2.57
1218 1447 9.476202 CCAATCGATTGTACTCTACATATCAAA 57.524 33.333 30.71 0.00 38.68 2.69
1234 1463 3.290948 TCAAAAATATACCTGCCGGCT 57.709 42.857 29.70 10.43 0.00 5.52
1241 1470 2.852495 ATACCTGCCGGCTCACGTTG 62.852 60.000 29.70 10.16 42.24 4.10
1267 1496 0.457851 GCCTCCCATAGATCGATCGG 59.542 60.000 19.33 14.27 0.00 4.18
1308 1537 4.035278 ACAAGATCGACGGAGAAAGATC 57.965 45.455 0.00 0.00 39.64 2.75
1309 1538 3.039405 CAAGATCGACGGAGAAAGATCG 58.961 50.000 0.00 0.00 42.94 3.69
1310 1539 2.562635 AGATCGACGGAGAAAGATCGA 58.437 47.619 0.00 0.00 46.59 3.59
1684 5268 2.772691 CGGCGACCTACCAGTCCTC 61.773 68.421 0.00 0.00 32.91 3.71
1828 5427 3.550656 GGCGACGAACTGTCCTTG 58.449 61.111 0.00 0.00 45.23 3.61
1847 5446 2.439409 TGTTCAAGGTGCTCATCATGG 58.561 47.619 0.00 0.00 0.00 3.66
1854 5453 1.602311 GTGCTCATCATGGTCATCCC 58.398 55.000 0.00 0.00 0.00 3.85
2079 5686 0.320421 TCCACGGCAAAGCTACTGAC 60.320 55.000 0.00 0.00 0.00 3.51
2088 5695 3.845178 CAAAGCTACTGACCGTGATACA 58.155 45.455 0.00 0.00 0.00 2.29
2179 5786 0.820226 TGTTCTCGCTGCAGCTAGAT 59.180 50.000 35.13 0.00 41.53 1.98
2209 5816 2.290768 GCTGGATATCTGGACATGGCAT 60.291 50.000 0.00 0.00 0.00 4.40
2215 5822 0.832626 TCTGGACATGGCATGACGAT 59.167 50.000 32.74 11.38 0.00 3.73
2258 5865 2.025155 TGAAGCTAGATCCACCGTCTC 58.975 52.381 0.00 0.00 0.00 3.36
2314 5921 2.260434 GAGTACGCGTGCTTGGGA 59.740 61.111 30.18 0.48 0.00 4.37
2374 5981 1.714794 GCGTCTATGCTGTCAGTGTT 58.285 50.000 0.93 0.00 0.00 3.32
2459 6066 0.536006 GCCCTTGGAGATCGATTGGG 60.536 60.000 0.00 6.31 36.41 4.12
2482 6089 1.529826 GCGCTATTTGTTTCTCGCCTG 60.530 52.381 0.00 0.00 37.02 4.85
2500 6107 1.076549 GGGTGAACTGGCCATGGAA 59.923 57.895 18.40 0.87 0.00 3.53
2503 6110 2.424812 GGGTGAACTGGCCATGGAATAT 60.425 50.000 18.40 0.00 0.00 1.28
2549 6156 2.034066 TGCTAGGTGTGGCTTGGC 59.966 61.111 0.00 0.00 0.00 4.52
2555 6162 2.133641 GGTGTGGCTTGGCTGGTTT 61.134 57.895 0.00 0.00 0.00 3.27
2561 6168 1.187567 GGCTTGGCTGGTTTGATGGT 61.188 55.000 0.00 0.00 0.00 3.55
2570 6178 2.878406 CTGGTTTGATGGTTCGTGAACT 59.122 45.455 12.10 0.00 40.94 3.01
2571 6179 2.616376 TGGTTTGATGGTTCGTGAACTG 59.384 45.455 12.10 0.00 40.94 3.16
2611 6223 1.869767 GCGAGTTGCATGAATAGAGGG 59.130 52.381 0.00 0.00 45.45 4.30
2612 6224 2.743183 GCGAGTTGCATGAATAGAGGGT 60.743 50.000 0.00 0.00 45.45 4.34
2613 6225 2.868583 CGAGTTGCATGAATAGAGGGTG 59.131 50.000 0.00 0.00 0.00 4.61
2614 6226 2.615912 GAGTTGCATGAATAGAGGGTGC 59.384 50.000 0.00 0.00 36.39 5.01
2615 6227 2.240667 AGTTGCATGAATAGAGGGTGCT 59.759 45.455 0.00 0.00 36.78 4.40
2616 6228 3.019564 GTTGCATGAATAGAGGGTGCTT 58.980 45.455 0.00 0.00 36.78 3.91
2617 6229 2.646930 TGCATGAATAGAGGGTGCTTG 58.353 47.619 0.00 0.00 36.78 4.01
2618 6230 2.239402 TGCATGAATAGAGGGTGCTTGA 59.761 45.455 0.00 0.00 36.78 3.02
2619 6231 3.117776 TGCATGAATAGAGGGTGCTTGAT 60.118 43.478 0.00 0.00 36.78 2.57
2620 6232 4.102996 TGCATGAATAGAGGGTGCTTGATA 59.897 41.667 0.00 0.00 36.78 2.15
2621 6233 4.453819 GCATGAATAGAGGGTGCTTGATAC 59.546 45.833 0.00 0.00 33.25 2.24
2622 6234 4.322080 TGAATAGAGGGTGCTTGATACG 57.678 45.455 0.00 0.00 0.00 3.06
2623 6235 3.704566 TGAATAGAGGGTGCTTGATACGT 59.295 43.478 0.00 0.00 0.00 3.57
2624 6236 4.161565 TGAATAGAGGGTGCTTGATACGTT 59.838 41.667 0.00 0.00 0.00 3.99
2625 6237 4.755266 ATAGAGGGTGCTTGATACGTTT 57.245 40.909 0.00 0.00 0.00 3.60
2626 6238 3.418684 AGAGGGTGCTTGATACGTTTT 57.581 42.857 0.00 0.00 0.00 2.43
2627 6239 4.546829 AGAGGGTGCTTGATACGTTTTA 57.453 40.909 0.00 0.00 0.00 1.52
2628 6240 4.504858 AGAGGGTGCTTGATACGTTTTAG 58.495 43.478 0.00 0.00 0.00 1.85
2629 6241 4.020485 AGAGGGTGCTTGATACGTTTTAGT 60.020 41.667 0.00 0.00 0.00 2.24
2630 6242 4.251268 AGGGTGCTTGATACGTTTTAGTC 58.749 43.478 0.00 0.00 0.00 2.59
2631 6243 4.020485 AGGGTGCTTGATACGTTTTAGTCT 60.020 41.667 0.00 0.00 0.00 3.24
2632 6244 4.329256 GGGTGCTTGATACGTTTTAGTCTC 59.671 45.833 0.00 0.00 0.00 3.36
2633 6245 4.927425 GGTGCTTGATACGTTTTAGTCTCA 59.073 41.667 0.00 0.00 0.00 3.27
2634 6246 5.581085 GGTGCTTGATACGTTTTAGTCTCAT 59.419 40.000 0.00 0.00 29.40 2.90
2635 6247 6.455646 GGTGCTTGATACGTTTTAGTCTCATG 60.456 42.308 0.00 0.00 29.40 3.07
2636 6248 6.310467 GTGCTTGATACGTTTTAGTCTCATGA 59.690 38.462 0.00 0.00 29.77 3.07
2637 6249 6.310467 TGCTTGATACGTTTTAGTCTCATGAC 59.690 38.462 0.00 0.00 43.22 3.06
2651 6263 6.222038 GTCTCATGACTACAAGTAATGGGA 57.778 41.667 3.24 3.24 42.88 4.37
2652 6264 6.222038 TCTCATGACTACAAGTAATGGGAC 57.778 41.667 3.24 0.00 40.78 4.46
2653 6265 5.958380 TCTCATGACTACAAGTAATGGGACT 59.042 40.000 3.24 0.00 40.78 3.85
2654 6266 7.123383 TCTCATGACTACAAGTAATGGGACTA 58.877 38.462 3.24 0.00 40.78 2.59
2655 6267 7.618117 TCTCATGACTACAAGTAATGGGACTAA 59.382 37.037 3.24 0.00 40.78 2.24
2656 6268 8.141298 TCATGACTACAAGTAATGGGACTAAA 57.859 34.615 4.86 0.00 37.61 1.85
2657 6269 8.598916 TCATGACTACAAGTAATGGGACTAAAA 58.401 33.333 4.86 0.00 37.61 1.52
2658 6270 8.665685 CATGACTACAAGTAATGGGACTAAAAC 58.334 37.037 0.00 0.00 34.12 2.43
2659 6271 7.970102 TGACTACAAGTAATGGGACTAAAACT 58.030 34.615 0.00 0.00 0.00 2.66
2660 6272 8.434392 TGACTACAAGTAATGGGACTAAAACTT 58.566 33.333 0.00 0.00 0.00 2.66
2661 6273 8.617290 ACTACAAGTAATGGGACTAAAACTTG 57.383 34.615 10.55 10.55 45.76 3.16
2662 6274 6.327279 ACAAGTAATGGGACTAAAACTTGC 57.673 37.500 11.73 0.00 44.74 4.01
2663 6275 6.068670 ACAAGTAATGGGACTAAAACTTGCT 58.931 36.000 11.73 0.00 44.74 3.91
2664 6276 7.228590 ACAAGTAATGGGACTAAAACTTGCTA 58.771 34.615 11.73 0.00 44.74 3.49
2665 6277 7.390718 ACAAGTAATGGGACTAAAACTTGCTAG 59.609 37.037 11.73 0.00 44.74 3.42
2666 6278 5.880887 AGTAATGGGACTAAAACTTGCTAGC 59.119 40.000 8.10 8.10 0.00 3.42
2667 6279 3.067684 TGGGACTAAAACTTGCTAGCC 57.932 47.619 13.29 0.00 0.00 3.93
2668 6280 2.290705 TGGGACTAAAACTTGCTAGCCC 60.291 50.000 13.29 1.26 34.57 5.19
2669 6281 2.026169 GGGACTAAAACTTGCTAGCCCT 60.026 50.000 13.29 0.00 32.81 5.19
2670 6282 3.199289 GGGACTAAAACTTGCTAGCCCTA 59.801 47.826 13.29 0.00 32.81 3.53
2671 6283 4.190001 GGACTAAAACTTGCTAGCCCTAC 58.810 47.826 13.29 0.00 0.00 3.18
2672 6284 4.190001 GACTAAAACTTGCTAGCCCTACC 58.810 47.826 13.29 0.00 0.00 3.18
2673 6285 2.509166 AAAACTTGCTAGCCCTACCC 57.491 50.000 13.29 0.00 0.00 3.69
2674 6286 1.368374 AAACTTGCTAGCCCTACCCA 58.632 50.000 13.29 0.00 0.00 4.51
2675 6287 1.596496 AACTTGCTAGCCCTACCCAT 58.404 50.000 13.29 0.00 0.00 4.00
2676 6288 0.839946 ACTTGCTAGCCCTACCCATG 59.160 55.000 13.29 0.00 0.00 3.66
2677 6289 0.536006 CTTGCTAGCCCTACCCATGC 60.536 60.000 13.29 0.00 0.00 4.06
2678 6290 0.988145 TTGCTAGCCCTACCCATGCT 60.988 55.000 13.29 0.00 39.10 3.79
2679 6291 0.988145 TGCTAGCCCTACCCATGCTT 60.988 55.000 13.29 0.00 36.57 3.91
2680 6292 0.536006 GCTAGCCCTACCCATGCTTG 60.536 60.000 2.29 0.00 36.57 4.01
2681 6293 0.109342 CTAGCCCTACCCATGCTTGG 59.891 60.000 11.68 11.68 43.23 3.61
2682 6294 0.327095 TAGCCCTACCCATGCTTGGA 60.327 55.000 19.85 0.00 46.92 3.53
2683 6295 0.995675 AGCCCTACCCATGCTTGGAT 60.996 55.000 19.85 5.33 46.92 3.41
2684 6296 0.538287 GCCCTACCCATGCTTGGATC 60.538 60.000 19.85 0.00 46.92 3.36
2685 6297 0.111253 CCCTACCCATGCTTGGATCC 59.889 60.000 19.85 4.20 46.92 3.36
2686 6298 0.846015 CCTACCCATGCTTGGATCCA 59.154 55.000 19.85 11.44 46.92 3.41
2687 6299 1.215173 CCTACCCATGCTTGGATCCAA 59.785 52.381 25.53 25.53 46.92 3.53
2701 6313 7.176589 CTTGGATCCAAGTACTAAAGAGACT 57.823 40.000 36.68 0.00 45.91 3.24
2702 6314 8.294954 CTTGGATCCAAGTACTAAAGAGACTA 57.705 38.462 36.68 8.30 45.91 2.59
2703 6315 8.660295 TTGGATCCAAGTACTAAAGAGACTAA 57.340 34.615 23.63 0.00 0.00 2.24
2704 6316 8.660295 TGGATCCAAGTACTAAAGAGACTAAA 57.340 34.615 13.46 0.00 0.00 1.85
2705 6317 9.096823 TGGATCCAAGTACTAAAGAGACTAAAA 57.903 33.333 13.46 0.00 0.00 1.52
2720 6332 9.507329 AAGAGACTAAAATCAAGTTAATGAGCA 57.493 29.630 0.00 0.00 31.76 4.26
2721 6333 9.678260 AGAGACTAAAATCAAGTTAATGAGCAT 57.322 29.630 0.00 0.00 31.76 3.79
2734 6346 9.866655 AAGTTAATGAGCATTTATTATCCTCCA 57.133 29.630 0.52 0.00 32.50 3.86
2735 6347 9.866655 AGTTAATGAGCATTTATTATCCTCCAA 57.133 29.630 0.52 0.00 32.50 3.53
2738 6350 6.959639 TGAGCATTTATTATCCTCCAAACC 57.040 37.500 0.00 0.00 0.00 3.27
2739 6351 5.833131 TGAGCATTTATTATCCTCCAAACCC 59.167 40.000 0.00 0.00 0.00 4.11
2740 6352 6.030727 AGCATTTATTATCCTCCAAACCCT 57.969 37.500 0.00 0.00 0.00 4.34
2741 6353 6.071320 AGCATTTATTATCCTCCAAACCCTC 58.929 40.000 0.00 0.00 0.00 4.30
2742 6354 5.243954 GCATTTATTATCCTCCAAACCCTCC 59.756 44.000 0.00 0.00 0.00 4.30
2743 6355 6.372931 CATTTATTATCCTCCAAACCCTCCA 58.627 40.000 0.00 0.00 0.00 3.86
2744 6356 6.410222 TTTATTATCCTCCAAACCCTCCAA 57.590 37.500 0.00 0.00 0.00 3.53
2745 6357 6.606241 TTATTATCCTCCAAACCCTCCAAT 57.394 37.500 0.00 0.00 0.00 3.16
2746 6358 4.519906 TTATCCTCCAAACCCTCCAATC 57.480 45.455 0.00 0.00 0.00 2.67
2747 6359 0.999712 TCCTCCAAACCCTCCAATCC 59.000 55.000 0.00 0.00 0.00 3.01
2748 6360 0.704076 CCTCCAAACCCTCCAATCCA 59.296 55.000 0.00 0.00 0.00 3.41
2749 6361 1.341383 CCTCCAAACCCTCCAATCCAG 60.341 57.143 0.00 0.00 0.00 3.86
2750 6362 1.635487 CTCCAAACCCTCCAATCCAGA 59.365 52.381 0.00 0.00 0.00 3.86
2751 6363 2.041620 CTCCAAACCCTCCAATCCAGAA 59.958 50.000 0.00 0.00 0.00 3.02
2752 6364 2.171003 CCAAACCCTCCAATCCAGAAC 58.829 52.381 0.00 0.00 0.00 3.01
2753 6365 2.225117 CCAAACCCTCCAATCCAGAACT 60.225 50.000 0.00 0.00 0.00 3.01
2754 6366 3.084786 CAAACCCTCCAATCCAGAACTC 58.915 50.000 0.00 0.00 0.00 3.01
2755 6367 0.905357 ACCCTCCAATCCAGAACTCG 59.095 55.000 0.00 0.00 0.00 4.18
2756 6368 0.462759 CCCTCCAATCCAGAACTCGC 60.463 60.000 0.00 0.00 0.00 5.03
2757 6369 0.462759 CCTCCAATCCAGAACTCGCC 60.463 60.000 0.00 0.00 0.00 5.54
2758 6370 0.462759 CTCCAATCCAGAACTCGCCC 60.463 60.000 0.00 0.00 0.00 6.13
2759 6371 1.815421 CCAATCCAGAACTCGCCCG 60.815 63.158 0.00 0.00 0.00 6.13
2760 6372 1.079127 CAATCCAGAACTCGCCCGT 60.079 57.895 0.00 0.00 0.00 5.28
2761 6373 1.079127 AATCCAGAACTCGCCCGTG 60.079 57.895 0.00 0.00 0.00 4.94
2762 6374 1.827399 AATCCAGAACTCGCCCGTGT 61.827 55.000 0.00 0.00 0.00 4.49
2763 6375 1.827399 ATCCAGAACTCGCCCGTGTT 61.827 55.000 7.71 7.71 34.99 3.32
2764 6376 1.180456 TCCAGAACTCGCCCGTGTTA 61.180 55.000 7.93 0.00 32.85 2.41
2765 6377 0.320073 CCAGAACTCGCCCGTGTTAA 60.320 55.000 7.93 0.00 32.85 2.01
2766 6378 1.504359 CAGAACTCGCCCGTGTTAAA 58.496 50.000 7.93 0.00 32.85 1.52
2767 6379 1.459592 CAGAACTCGCCCGTGTTAAAG 59.540 52.381 7.93 0.00 32.85 1.85
2768 6380 0.794473 GAACTCGCCCGTGTTAAAGG 59.206 55.000 7.93 0.00 32.85 3.11
2769 6381 0.393820 AACTCGCCCGTGTTAAAGGA 59.606 50.000 6.36 0.00 31.23 3.36
2770 6382 0.037605 ACTCGCCCGTGTTAAAGGAG 60.038 55.000 0.00 0.00 0.00 3.69
2771 6383 0.245539 CTCGCCCGTGTTAAAGGAGA 59.754 55.000 0.00 0.00 0.00 3.71
2772 6384 0.245539 TCGCCCGTGTTAAAGGAGAG 59.754 55.000 0.00 0.00 0.00 3.20
2773 6385 0.739813 CGCCCGTGTTAAAGGAGAGG 60.740 60.000 0.00 0.00 0.00 3.69
2774 6386 0.611714 GCCCGTGTTAAAGGAGAGGA 59.388 55.000 0.00 0.00 0.00 3.71
2775 6387 1.405661 GCCCGTGTTAAAGGAGAGGAG 60.406 57.143 0.00 0.00 0.00 3.69
2776 6388 1.900486 CCCGTGTTAAAGGAGAGGAGT 59.100 52.381 0.00 0.00 0.00 3.85
2777 6389 2.302157 CCCGTGTTAAAGGAGAGGAGTT 59.698 50.000 0.00 0.00 0.00 3.01
2778 6390 3.512724 CCCGTGTTAAAGGAGAGGAGTTA 59.487 47.826 0.00 0.00 0.00 2.24
2779 6391 4.020839 CCCGTGTTAAAGGAGAGGAGTTAA 60.021 45.833 0.00 0.00 0.00 2.01
2780 6392 5.511888 CCCGTGTTAAAGGAGAGGAGTTAAA 60.512 44.000 0.00 0.00 0.00 1.52
2781 6393 6.171213 CCGTGTTAAAGGAGAGGAGTTAAAT 58.829 40.000 0.00 0.00 0.00 1.40
2782 6394 6.092259 CCGTGTTAAAGGAGAGGAGTTAAATG 59.908 42.308 0.00 0.00 0.00 2.32
2783 6395 6.872020 CGTGTTAAAGGAGAGGAGTTAAATGA 59.128 38.462 0.00 0.00 0.00 2.57
2784 6396 7.063544 CGTGTTAAAGGAGAGGAGTTAAATGAG 59.936 40.741 0.00 0.00 0.00 2.90
2785 6397 7.334671 GTGTTAAAGGAGAGGAGTTAAATGAGG 59.665 40.741 0.00 0.00 0.00 3.86
2786 6398 7.236847 TGTTAAAGGAGAGGAGTTAAATGAGGA 59.763 37.037 0.00 0.00 0.00 3.71
2787 6399 5.948742 AAGGAGAGGAGTTAAATGAGGAG 57.051 43.478 0.00 0.00 0.00 3.69
2788 6400 5.213868 AGGAGAGGAGTTAAATGAGGAGA 57.786 43.478 0.00 0.00 0.00 3.71
2789 6401 5.208121 AGGAGAGGAGTTAAATGAGGAGAG 58.792 45.833 0.00 0.00 0.00 3.20
2790 6402 5.043732 AGGAGAGGAGTTAAATGAGGAGAGA 60.044 44.000 0.00 0.00 0.00 3.10
2791 6403 5.301805 GGAGAGGAGTTAAATGAGGAGAGAG 59.698 48.000 0.00 0.00 0.00 3.20
2792 6404 6.086011 AGAGGAGTTAAATGAGGAGAGAGA 57.914 41.667 0.00 0.00 0.00 3.10
2793 6405 6.129179 AGAGGAGTTAAATGAGGAGAGAGAG 58.871 44.000 0.00 0.00 0.00 3.20
2794 6406 5.208121 AGGAGTTAAATGAGGAGAGAGAGG 58.792 45.833 0.00 0.00 0.00 3.69
2795 6407 5.043732 AGGAGTTAAATGAGGAGAGAGAGGA 60.044 44.000 0.00 0.00 0.00 3.71
2796 6408 5.068591 GGAGTTAAATGAGGAGAGAGAGGAC 59.931 48.000 0.00 0.00 0.00 3.85
2797 6409 5.837829 AGTTAAATGAGGAGAGAGAGGACT 58.162 41.667 0.00 0.00 0.00 3.85
2798 6410 6.975949 AGTTAAATGAGGAGAGAGAGGACTA 58.024 40.000 0.00 0.00 0.00 2.59
2799 6411 7.415086 AGTTAAATGAGGAGAGAGAGGACTAA 58.585 38.462 0.00 0.00 0.00 2.24
2800 6412 8.065007 AGTTAAATGAGGAGAGAGAGGACTAAT 58.935 37.037 0.00 0.00 0.00 1.73
2801 6413 6.976934 AAATGAGGAGAGAGAGGACTAATC 57.023 41.667 0.00 0.00 0.00 1.75
2802 6414 4.447138 TGAGGAGAGAGAGGACTAATCC 57.553 50.000 0.00 0.00 46.69 3.01
2817 6429 6.296803 GGACTAATCCACATTTTAGTAGGGG 58.703 44.000 0.00 0.00 45.47 4.79
2818 6430 6.126565 GGACTAATCCACATTTTAGTAGGGGT 60.127 42.308 0.00 0.00 45.47 4.95
2819 6431 7.071572 GGACTAATCCACATTTTAGTAGGGGTA 59.928 40.741 0.00 0.00 45.47 3.69
2820 6432 7.799081 ACTAATCCACATTTTAGTAGGGGTAC 58.201 38.462 0.00 0.00 36.99 3.34
2821 6433 7.147426 ACTAATCCACATTTTAGTAGGGGTACC 60.147 40.741 2.17 2.17 41.38 3.34
2861 6473 7.974482 TTAGTCTCAAAACTAGTTTTAGCCC 57.026 36.000 28.43 18.06 40.45 5.19
2862 6474 5.314529 AGTCTCAAAACTAGTTTTAGCCCC 58.685 41.667 28.43 16.92 40.45 5.80
2863 6475 5.073280 AGTCTCAAAACTAGTTTTAGCCCCT 59.927 40.000 28.43 18.47 40.45 4.79
2864 6476 5.411977 GTCTCAAAACTAGTTTTAGCCCCTC 59.588 44.000 28.43 14.00 40.45 4.30
2865 6477 5.309806 TCTCAAAACTAGTTTTAGCCCCTCT 59.690 40.000 28.43 5.53 40.45 3.69
2866 6478 5.948842 TCAAAACTAGTTTTAGCCCCTCTT 58.051 37.500 28.43 4.84 40.45 2.85
2867 6479 6.370453 TCAAAACTAGTTTTAGCCCCTCTTT 58.630 36.000 28.43 4.35 40.45 2.52
2868 6480 7.519927 TCAAAACTAGTTTTAGCCCCTCTTTA 58.480 34.615 28.43 6.15 40.45 1.85
2869 6481 7.664318 TCAAAACTAGTTTTAGCCCCTCTTTAG 59.336 37.037 28.43 14.23 40.45 1.85
2870 6482 6.699242 AACTAGTTTTAGCCCCTCTTTAGT 57.301 37.500 1.12 0.00 0.00 2.24
2871 6483 6.297080 ACTAGTTTTAGCCCCTCTTTAGTC 57.703 41.667 0.00 0.00 0.00 2.59
2872 6484 5.783875 ACTAGTTTTAGCCCCTCTTTAGTCA 59.216 40.000 0.00 0.00 0.00 3.41
2873 6485 5.167303 AGTTTTAGCCCCTCTTTAGTCAG 57.833 43.478 0.00 0.00 0.00 3.51
2874 6486 4.019231 AGTTTTAGCCCCTCTTTAGTCAGG 60.019 45.833 0.00 0.00 0.00 3.86
2875 6487 1.497161 TAGCCCCTCTTTAGTCAGGC 58.503 55.000 0.00 0.00 40.79 4.85
2876 6488 1.153349 GCCCCTCTTTAGTCAGGCG 60.153 63.158 0.00 0.00 0.00 5.52
2877 6489 1.900545 GCCCCTCTTTAGTCAGGCGT 61.901 60.000 0.00 0.00 0.00 5.68
2878 6490 0.108138 CCCCTCTTTAGTCAGGCGTG 60.108 60.000 0.00 0.00 0.00 5.34
2879 6491 0.741221 CCCTCTTTAGTCAGGCGTGC 60.741 60.000 0.35 0.00 0.00 5.34
2880 6492 0.247736 CCTCTTTAGTCAGGCGTGCT 59.752 55.000 0.35 5.15 0.00 4.40
2881 6493 1.338200 CCTCTTTAGTCAGGCGTGCTT 60.338 52.381 0.35 0.00 0.00 3.91
2882 6494 1.728971 CTCTTTAGTCAGGCGTGCTTG 59.271 52.381 0.35 0.00 0.00 4.01
2883 6495 0.798776 CTTTAGTCAGGCGTGCTTGG 59.201 55.000 0.35 0.00 0.00 3.61
2884 6496 0.394938 TTTAGTCAGGCGTGCTTGGA 59.605 50.000 0.35 0.00 0.00 3.53
2885 6497 0.394938 TTAGTCAGGCGTGCTTGGAA 59.605 50.000 0.35 0.00 0.00 3.53
2886 6498 0.320421 TAGTCAGGCGTGCTTGGAAC 60.320 55.000 0.35 0.00 0.00 3.62
2887 6499 1.598130 GTCAGGCGTGCTTGGAACT 60.598 57.895 0.35 0.00 0.00 3.01
2888 6500 1.148273 TCAGGCGTGCTTGGAACTT 59.852 52.632 0.35 0.00 0.00 2.66
2889 6501 0.465460 TCAGGCGTGCTTGGAACTTT 60.465 50.000 0.35 0.00 0.00 2.66
2890 6502 1.202710 TCAGGCGTGCTTGGAACTTTA 60.203 47.619 0.35 0.00 0.00 1.85
2891 6503 1.197721 CAGGCGTGCTTGGAACTTTAG 59.802 52.381 0.00 0.00 0.00 1.85
2892 6504 0.109735 GGCGTGCTTGGAACTTTAGC 60.110 55.000 0.00 0.00 35.50 3.09
2893 6505 0.109735 GCGTGCTTGGAACTTTAGCC 60.110 55.000 0.00 0.00 34.03 3.93
2894 6506 1.523758 CGTGCTTGGAACTTTAGCCT 58.476 50.000 0.00 0.00 34.03 4.58
2895 6507 1.464997 CGTGCTTGGAACTTTAGCCTC 59.535 52.381 0.00 0.00 34.03 4.70
2896 6508 2.784347 GTGCTTGGAACTTTAGCCTCT 58.216 47.619 0.00 0.00 34.03 3.69
2897 6509 3.149981 GTGCTTGGAACTTTAGCCTCTT 58.850 45.455 0.00 0.00 34.03 2.85
2898 6510 4.324267 GTGCTTGGAACTTTAGCCTCTTA 58.676 43.478 0.00 0.00 34.03 2.10
2899 6511 4.760204 GTGCTTGGAACTTTAGCCTCTTAA 59.240 41.667 0.00 0.00 34.03 1.85
2900 6512 5.240844 GTGCTTGGAACTTTAGCCTCTTAAA 59.759 40.000 0.00 0.00 34.03 1.52
2901 6513 5.473504 TGCTTGGAACTTTAGCCTCTTAAAG 59.526 40.000 4.46 4.46 43.21 1.85
2902 6514 5.705905 GCTTGGAACTTTAGCCTCTTAAAGA 59.294 40.000 11.30 0.00 41.17 2.52
2903 6515 6.128145 GCTTGGAACTTTAGCCTCTTAAAGAG 60.128 42.308 11.30 0.56 41.17 2.85
2904 6516 6.681729 TGGAACTTTAGCCTCTTAAAGAGA 57.318 37.500 11.30 0.00 45.07 3.10
2905 6517 6.465084 TGGAACTTTAGCCTCTTAAAGAGAC 58.535 40.000 11.30 0.00 45.07 3.36
2906 6518 6.270231 TGGAACTTTAGCCTCTTAAAGAGACT 59.730 38.462 11.30 1.37 45.07 3.24
2907 6519 7.453752 TGGAACTTTAGCCTCTTAAAGAGACTA 59.546 37.037 11.30 0.40 45.07 2.59
2908 6520 8.479689 GGAACTTTAGCCTCTTAAAGAGACTAT 58.520 37.037 11.30 0.00 45.07 2.12
2909 6521 9.878667 GAACTTTAGCCTCTTAAAGAGACTATT 57.121 33.333 11.30 0.00 45.07 1.73
2916 6528 9.878667 AGCCTCTTAAAGAGACTATTTTTAGTC 57.121 33.333 0.00 5.24 45.07 2.59
2917 6529 9.654663 GCCTCTTAAAGAGACTATTTTTAGTCA 57.345 33.333 13.86 0.00 45.07 3.41
3041 6653 0.986550 GCCCTAGCCCTTTAGTCCCA 60.987 60.000 0.00 0.00 0.00 4.37
3267 6883 5.950549 AGAACTGTCCTCTCTTATTTCCGTA 59.049 40.000 0.00 0.00 0.00 4.02
3422 7041 2.431782 ACATGCTTGTTGCCTTCACTTT 59.568 40.909 0.00 0.00 42.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 91 0.242017 GGAAGCGCAAGTGCAGAATT 59.758 50.000 11.47 0.00 42.21 2.17
218 219 3.375299 GGAGATGCAGGTGTTGTATTGAC 59.625 47.826 0.00 0.00 31.76 3.18
232 233 1.198094 TCCGTGGAAAGGGAGATGCA 61.198 55.000 0.00 0.00 35.56 3.96
236 237 0.685097 CAAGTCCGTGGAAAGGGAGA 59.315 55.000 0.00 0.00 35.56 3.71
330 340 1.608627 AAACCGGTACCTCCTCGCT 60.609 57.895 8.00 0.00 0.00 4.93
378 605 5.963214 AATAATGAACCCGGTAGTAAGGT 57.037 39.130 0.00 0.00 34.60 3.50
389 616 5.835280 AGGATCCACATGAAATAATGAACCC 59.165 40.000 15.82 0.00 0.00 4.11
584 812 3.638160 TGGAAAAAGCTGCAGTCAGAAAT 59.362 39.130 16.64 0.00 42.95 2.17
716 945 1.271108 TGCGGAATGGTCTTGCTGTTA 60.271 47.619 0.00 0.00 0.00 2.41
726 955 2.914908 GCGGTTGTTGCGGAATGGT 61.915 57.895 0.00 0.00 0.00 3.55
993 1222 3.135530 GGAATGAGCAGGTAGTGGATTCT 59.864 47.826 0.00 0.00 0.00 2.40
1067 1296 2.511818 CCACTGGGTGCCGAGTATA 58.488 57.895 5.59 0.00 31.34 1.47
1102 1331 2.229543 TCCAAATCGCACGTACTACACT 59.770 45.455 0.00 0.00 0.00 3.55
1103 1332 2.597305 CTCCAAATCGCACGTACTACAC 59.403 50.000 0.00 0.00 0.00 2.90
1104 1333 2.229543 ACTCCAAATCGCACGTACTACA 59.770 45.455 0.00 0.00 0.00 2.74
1105 1334 2.850647 GACTCCAAATCGCACGTACTAC 59.149 50.000 0.00 0.00 0.00 2.73
1106 1335 2.476686 CGACTCCAAATCGCACGTACTA 60.477 50.000 0.00 0.00 31.96 1.82
1107 1336 1.731424 CGACTCCAAATCGCACGTACT 60.731 52.381 0.00 0.00 31.96 2.73
1108 1337 0.638746 CGACTCCAAATCGCACGTAC 59.361 55.000 0.00 0.00 31.96 3.67
1109 1338 0.457166 CCGACTCCAAATCGCACGTA 60.457 55.000 0.00 0.00 38.27 3.57
1110 1339 1.736645 CCGACTCCAAATCGCACGT 60.737 57.895 0.00 0.00 38.27 4.49
1111 1340 1.289109 AACCGACTCCAAATCGCACG 61.289 55.000 0.00 0.00 38.27 5.34
1112 1341 0.442699 GAACCGACTCCAAATCGCAC 59.557 55.000 0.00 0.00 38.27 5.34
1113 1342 0.672401 GGAACCGACTCCAAATCGCA 60.672 55.000 0.00 0.00 38.27 5.10
1114 1343 1.693083 CGGAACCGACTCCAAATCGC 61.693 60.000 7.53 0.00 42.83 4.58
1115 1344 0.108992 TCGGAACCGACTCCAAATCG 60.109 55.000 12.04 0.00 44.01 3.34
1116 1345 3.826637 TCGGAACCGACTCCAAATC 57.173 52.632 12.04 0.00 44.01 2.17
1133 1362 7.172019 TGGAAAGTTTTTCTAACACGACCTATC 59.828 37.037 0.00 0.00 0.00 2.08
1134 1363 6.993902 TGGAAAGTTTTTCTAACACGACCTAT 59.006 34.615 0.00 0.00 0.00 2.57
1135 1364 6.347696 TGGAAAGTTTTTCTAACACGACCTA 58.652 36.000 0.00 0.00 0.00 3.08
1136 1365 5.187687 TGGAAAGTTTTTCTAACACGACCT 58.812 37.500 0.00 0.00 0.00 3.85
1137 1366 5.295045 TCTGGAAAGTTTTTCTAACACGACC 59.705 40.000 0.00 0.00 0.00 4.79
1138 1367 6.183360 TGTCTGGAAAGTTTTTCTAACACGAC 60.183 38.462 0.00 1.44 0.00 4.34
1139 1368 5.875910 TGTCTGGAAAGTTTTTCTAACACGA 59.124 36.000 0.00 0.00 0.00 4.35
1140 1369 6.114221 TGTCTGGAAAGTTTTTCTAACACG 57.886 37.500 2.03 0.00 0.00 4.49
1141 1370 6.472486 GCTTGTCTGGAAAGTTTTTCTAACAC 59.528 38.462 2.03 0.00 0.00 3.32
1142 1371 6.560711 GCTTGTCTGGAAAGTTTTTCTAACA 58.439 36.000 2.03 2.28 0.00 2.41
1143 1372 5.681543 CGCTTGTCTGGAAAGTTTTTCTAAC 59.318 40.000 2.03 0.00 0.00 2.34
1144 1373 5.587043 TCGCTTGTCTGGAAAGTTTTTCTAA 59.413 36.000 2.03 0.00 0.00 2.10
1145 1374 5.007332 GTCGCTTGTCTGGAAAGTTTTTCTA 59.993 40.000 2.03 0.00 0.00 2.10
1146 1375 3.945285 TCGCTTGTCTGGAAAGTTTTTCT 59.055 39.130 2.03 0.00 0.00 2.52
1147 1376 4.035684 GTCGCTTGTCTGGAAAGTTTTTC 58.964 43.478 0.00 0.00 0.00 2.29
1148 1377 3.181490 GGTCGCTTGTCTGGAAAGTTTTT 60.181 43.478 0.00 0.00 0.00 1.94
1149 1378 2.357952 GGTCGCTTGTCTGGAAAGTTTT 59.642 45.455 0.00 0.00 0.00 2.43
1150 1379 1.947456 GGTCGCTTGTCTGGAAAGTTT 59.053 47.619 0.00 0.00 0.00 2.66
1151 1380 1.134220 TGGTCGCTTGTCTGGAAAGTT 60.134 47.619 0.00 0.00 0.00 2.66
1152 1381 0.468226 TGGTCGCTTGTCTGGAAAGT 59.532 50.000 0.00 0.00 0.00 2.66
1153 1382 1.151668 CTGGTCGCTTGTCTGGAAAG 58.848 55.000 0.00 0.00 0.00 2.62
1154 1383 0.468226 ACTGGTCGCTTGTCTGGAAA 59.532 50.000 0.00 0.00 0.00 3.13
1155 1384 0.468226 AACTGGTCGCTTGTCTGGAA 59.532 50.000 0.00 0.00 0.00 3.53
1156 1385 0.468226 AAACTGGTCGCTTGTCTGGA 59.532 50.000 0.00 0.00 0.00 3.86
1157 1386 0.588252 CAAACTGGTCGCTTGTCTGG 59.412 55.000 0.00 0.00 0.00 3.86
1158 1387 1.299541 ACAAACTGGTCGCTTGTCTG 58.700 50.000 0.00 0.00 25.67 3.51
1159 1388 2.902705 TACAAACTGGTCGCTTGTCT 57.097 45.000 0.00 0.00 34.09 3.41
1160 1389 2.415512 GGATACAAACTGGTCGCTTGTC 59.584 50.000 0.00 0.00 34.09 3.18
1161 1390 2.423577 GGATACAAACTGGTCGCTTGT 58.576 47.619 0.00 0.00 36.08 3.16
1162 1391 1.393539 CGGATACAAACTGGTCGCTTG 59.606 52.381 0.00 0.00 0.00 4.01
1163 1392 1.674817 CCGGATACAAACTGGTCGCTT 60.675 52.381 0.00 0.00 0.00 4.68
1164 1393 0.108329 CCGGATACAAACTGGTCGCT 60.108 55.000 0.00 0.00 0.00 4.93
1165 1394 0.108520 TCCGGATACAAACTGGTCGC 60.109 55.000 0.00 0.00 35.49 5.19
1166 1395 2.470821 GATCCGGATACAAACTGGTCG 58.529 52.381 19.15 0.00 35.49 4.79
1167 1396 2.169769 TGGATCCGGATACAAACTGGTC 59.830 50.000 27.66 6.35 35.49 4.02
1168 1397 2.193127 TGGATCCGGATACAAACTGGT 58.807 47.619 27.66 0.00 35.49 4.00
1169 1398 2.943033 GTTGGATCCGGATACAAACTGG 59.057 50.000 37.88 0.00 42.78 4.00
1170 1399 3.871594 GAGTTGGATCCGGATACAAACTG 59.128 47.826 37.88 0.00 42.78 3.16
1171 1400 3.118371 GGAGTTGGATCCGGATACAAACT 60.118 47.826 37.88 32.94 42.78 2.66
1172 1401 3.203716 GGAGTTGGATCCGGATACAAAC 58.796 50.000 37.88 31.41 42.78 2.93
1173 1402 2.841266 TGGAGTTGGATCCGGATACAAA 59.159 45.455 37.88 23.01 42.78 2.83
1174 1403 2.473070 TGGAGTTGGATCCGGATACAA 58.527 47.619 33.96 33.96 42.77 2.41
1175 1404 2.168458 TGGAGTTGGATCCGGATACA 57.832 50.000 26.16 26.16 42.77 2.29
1176 1405 3.665190 GATTGGAGTTGGATCCGGATAC 58.335 50.000 20.68 20.68 42.77 2.24
1177 1406 2.299013 CGATTGGAGTTGGATCCGGATA 59.701 50.000 19.15 0.00 42.77 2.59
1178 1407 1.070758 CGATTGGAGTTGGATCCGGAT 59.929 52.381 19.21 19.21 42.77 4.18
1179 1408 0.464036 CGATTGGAGTTGGATCCGGA 59.536 55.000 6.61 6.61 42.77 5.14
1180 1409 0.464036 TCGATTGGAGTTGGATCCGG 59.536 55.000 7.39 0.00 42.77 5.14
1181 1410 2.533266 ATCGATTGGAGTTGGATCCG 57.467 50.000 7.39 0.00 42.77 4.18
1182 1411 3.545703 ACAATCGATTGGAGTTGGATCC 58.454 45.455 34.69 4.20 41.96 3.36
1183 1412 5.360591 AGTACAATCGATTGGAGTTGGATC 58.639 41.667 34.69 17.42 41.96 3.36
1184 1413 5.129485 AGAGTACAATCGATTGGAGTTGGAT 59.871 40.000 34.69 18.00 41.96 3.41
1185 1414 4.466370 AGAGTACAATCGATTGGAGTTGGA 59.534 41.667 34.69 8.96 41.96 3.53
1186 1415 4.759782 AGAGTACAATCGATTGGAGTTGG 58.240 43.478 34.69 14.13 41.96 3.77
1187 1416 6.330278 TGTAGAGTACAATCGATTGGAGTTG 58.670 40.000 34.69 16.36 41.96 3.16
1188 1417 6.525578 TGTAGAGTACAATCGATTGGAGTT 57.474 37.500 34.69 21.49 41.96 3.01
1189 1418 6.716934 ATGTAGAGTACAATCGATTGGAGT 57.283 37.500 34.69 31.18 42.76 3.85
1190 1419 8.515414 TGATATGTAGAGTACAATCGATTGGAG 58.485 37.037 34.69 16.14 42.76 3.86
1191 1420 8.404107 TGATATGTAGAGTACAATCGATTGGA 57.596 34.615 34.69 28.10 42.76 3.53
1192 1421 9.476202 TTTGATATGTAGAGTACAATCGATTGG 57.524 33.333 34.69 20.35 42.76 3.16
1204 1433 9.726438 GGCAGGTATATTTTTGATATGTAGAGT 57.274 33.333 0.00 0.00 0.00 3.24
1205 1434 8.873830 CGGCAGGTATATTTTTGATATGTAGAG 58.126 37.037 0.00 0.00 0.00 2.43
1206 1435 7.822334 CCGGCAGGTATATTTTTGATATGTAGA 59.178 37.037 0.00 0.00 0.00 2.59
1207 1436 7.414098 GCCGGCAGGTATATTTTTGATATGTAG 60.414 40.741 24.80 0.00 40.50 2.74
1208 1437 6.373216 GCCGGCAGGTATATTTTTGATATGTA 59.627 38.462 24.80 0.00 40.50 2.29
1209 1438 5.183140 GCCGGCAGGTATATTTTTGATATGT 59.817 40.000 24.80 0.00 40.50 2.29
1210 1439 5.415701 AGCCGGCAGGTATATTTTTGATATG 59.584 40.000 31.54 0.00 40.50 1.78
1211 1440 5.570320 AGCCGGCAGGTATATTTTTGATAT 58.430 37.500 31.54 0.00 40.50 1.63
1212 1441 4.980573 AGCCGGCAGGTATATTTTTGATA 58.019 39.130 31.54 0.00 40.50 2.15
1213 1442 3.821033 GAGCCGGCAGGTATATTTTTGAT 59.179 43.478 31.54 0.06 40.50 2.57
1214 1443 3.211045 GAGCCGGCAGGTATATTTTTGA 58.789 45.455 31.54 0.00 40.50 2.69
1215 1444 2.948979 TGAGCCGGCAGGTATATTTTTG 59.051 45.455 31.54 0.00 40.50 2.44
1216 1445 2.949644 GTGAGCCGGCAGGTATATTTTT 59.050 45.455 31.54 1.71 40.50 1.94
1217 1446 2.572290 GTGAGCCGGCAGGTATATTTT 58.428 47.619 31.54 2.38 40.50 1.82
1218 1447 1.540363 CGTGAGCCGGCAGGTATATTT 60.540 52.381 31.54 3.33 40.50 1.40
1219 1448 0.033504 CGTGAGCCGGCAGGTATATT 59.966 55.000 31.54 4.27 40.50 1.28
1220 1449 1.113517 ACGTGAGCCGGCAGGTATAT 61.114 55.000 31.54 5.22 42.24 0.86
1221 1450 1.324740 AACGTGAGCCGGCAGGTATA 61.325 55.000 31.54 4.58 42.24 1.47
1222 1451 2.656069 AACGTGAGCCGGCAGGTAT 61.656 57.895 31.54 7.13 42.24 2.73
1223 1452 3.307906 AACGTGAGCCGGCAGGTA 61.308 61.111 31.54 8.68 42.24 3.08
1224 1453 4.988598 CAACGTGAGCCGGCAGGT 62.989 66.667 31.54 17.93 42.24 4.00
1234 1463 1.301716 GAGGCTTGGAGCAACGTGA 60.302 57.895 2.04 0.00 44.75 4.35
1241 1470 1.003003 GATCTATGGGAGGCTTGGAGC 59.997 57.143 0.00 0.00 41.46 4.70
1243 1472 1.133167 TCGATCTATGGGAGGCTTGGA 60.133 52.381 0.00 0.00 0.00 3.53
1267 1496 2.461897 TTTCGTTTTGTGCGGTTCTC 57.538 45.000 0.00 0.00 0.00 2.87
1279 1508 3.125316 TCCGTCGATCTTGTTTTCGTTT 58.875 40.909 0.00 0.00 36.74 3.60
1334 1566 3.068691 TTCGTCAGGGAGCGGGAG 61.069 66.667 0.00 0.00 0.00 4.30
1360 1592 4.040445 CTTGACGAGGAGGAAGATCTTC 57.960 50.000 24.68 24.68 38.80 2.87
1429 1661 2.360726 TCGGACACGAGCAGCCTA 60.361 61.111 0.00 0.00 45.59 3.93
1828 5427 2.421424 GACCATGATGAGCACCTTGAAC 59.579 50.000 0.00 0.00 0.00 3.18
1847 5446 0.460311 ATCGTGTCCTTCGGGATGAC 59.540 55.000 0.00 0.00 46.96 3.06
1854 5453 1.269166 GTACTGCATCGTGTCCTTCG 58.731 55.000 0.00 0.00 0.00 3.79
2079 5686 0.738412 GGGGTCACGTTGTATCACGG 60.738 60.000 0.00 0.00 44.82 4.94
2088 5695 3.637273 GGCTGAGGGGGTCACGTT 61.637 66.667 0.00 0.00 0.00 3.99
2149 5756 1.891060 GCGAGAACAACGTGAGCCTG 61.891 60.000 0.00 0.00 0.00 4.85
2179 5786 2.646930 CAGATATCCAGCTGGTTGCAA 58.353 47.619 31.58 13.35 45.94 4.08
2258 5865 4.789095 TCGTCTTGTTCTTCTTTTTCCG 57.211 40.909 0.00 0.00 0.00 4.30
2263 5870 3.561725 CAGCCTTCGTCTTGTTCTTCTTT 59.438 43.478 0.00 0.00 0.00 2.52
2272 5879 1.006102 ACGTCCAGCCTTCGTCTTG 60.006 57.895 0.00 0.00 32.26 3.02
2374 5981 1.622607 CCTGCATCACCCCGGTCTTA 61.623 60.000 0.00 0.00 0.00 2.10
2459 6066 0.586502 CGAGAAACAAATAGCGCCGC 60.587 55.000 2.29 0.00 0.00 6.53
2482 6089 0.324645 ATTCCATGGCCAGTTCACCC 60.325 55.000 13.05 0.00 0.00 4.61
2503 6110 7.620215 CGCAAGAAACAAATTGAAGAAAATCA 58.380 30.769 0.00 0.00 43.02 2.57
2549 6156 2.878406 AGTTCACGAACCATCAAACCAG 59.122 45.455 6.30 0.00 42.06 4.00
2555 6162 7.915293 AATAAATACAGTTCACGAACCATCA 57.085 32.000 6.30 0.00 42.06 3.07
2570 6178 8.367911 ACTCGCTCCATCTTCATAATAAATACA 58.632 33.333 0.00 0.00 0.00 2.29
2571 6179 8.764524 ACTCGCTCCATCTTCATAATAAATAC 57.235 34.615 0.00 0.00 0.00 1.89
2604 6216 4.755266 AAACGTATCAAGCACCCTCTAT 57.245 40.909 0.00 0.00 0.00 1.98
2605 6217 4.546829 AAAACGTATCAAGCACCCTCTA 57.453 40.909 0.00 0.00 0.00 2.43
2606 6218 3.418684 AAAACGTATCAAGCACCCTCT 57.581 42.857 0.00 0.00 0.00 3.69
2607 6219 4.251268 ACTAAAACGTATCAAGCACCCTC 58.749 43.478 0.00 0.00 0.00 4.30
2608 6220 4.020485 AGACTAAAACGTATCAAGCACCCT 60.020 41.667 0.00 0.00 0.00 4.34
2609 6221 4.251268 AGACTAAAACGTATCAAGCACCC 58.749 43.478 0.00 0.00 0.00 4.61
2610 6222 4.927425 TGAGACTAAAACGTATCAAGCACC 59.073 41.667 0.00 0.00 32.72 5.01
2611 6223 6.310467 TCATGAGACTAAAACGTATCAAGCAC 59.690 38.462 0.00 0.00 38.46 4.40
2612 6224 6.310467 GTCATGAGACTAAAACGTATCAAGCA 59.690 38.462 0.00 0.00 38.46 3.91
2613 6225 6.697152 GTCATGAGACTAAAACGTATCAAGC 58.303 40.000 0.00 0.00 38.46 4.01
2628 6240 6.043411 GTCCCATTACTTGTAGTCATGAGAC 58.957 44.000 0.00 0.00 45.31 3.36
2629 6241 5.958380 AGTCCCATTACTTGTAGTCATGAGA 59.042 40.000 0.00 0.00 32.93 3.27
2630 6242 6.227298 AGTCCCATTACTTGTAGTCATGAG 57.773 41.667 0.00 0.00 32.93 2.90
2631 6243 7.727578 TTAGTCCCATTACTTGTAGTCATGA 57.272 36.000 0.00 0.00 32.93 3.07
2632 6244 8.665685 GTTTTAGTCCCATTACTTGTAGTCATG 58.334 37.037 0.00 0.00 31.41 3.07
2633 6245 8.603304 AGTTTTAGTCCCATTACTTGTAGTCAT 58.397 33.333 0.00 0.00 0.00 3.06
2634 6246 7.970102 AGTTTTAGTCCCATTACTTGTAGTCA 58.030 34.615 0.00 0.00 0.00 3.41
2635 6247 8.718734 CAAGTTTTAGTCCCATTACTTGTAGTC 58.281 37.037 0.00 0.00 38.28 2.59
2636 6248 7.174426 GCAAGTTTTAGTCCCATTACTTGTAGT 59.826 37.037 12.61 0.00 42.56 2.73
2637 6249 7.390718 AGCAAGTTTTAGTCCCATTACTTGTAG 59.609 37.037 12.61 0.00 42.56 2.74
2638 6250 7.228590 AGCAAGTTTTAGTCCCATTACTTGTA 58.771 34.615 12.61 0.00 42.56 2.41
2639 6251 6.068670 AGCAAGTTTTAGTCCCATTACTTGT 58.931 36.000 12.61 0.48 42.56 3.16
2640 6252 6.575162 AGCAAGTTTTAGTCCCATTACTTG 57.425 37.500 0.00 0.00 43.13 3.16
2641 6253 6.374613 GCTAGCAAGTTTTAGTCCCATTACTT 59.625 38.462 10.63 0.00 0.00 2.24
2642 6254 5.880887 GCTAGCAAGTTTTAGTCCCATTACT 59.119 40.000 10.63 0.00 0.00 2.24
2643 6255 5.066117 GGCTAGCAAGTTTTAGTCCCATTAC 59.934 44.000 18.24 0.00 0.00 1.89
2644 6256 5.190677 GGCTAGCAAGTTTTAGTCCCATTA 58.809 41.667 18.24 0.00 0.00 1.90
2645 6257 4.017126 GGCTAGCAAGTTTTAGTCCCATT 58.983 43.478 18.24 0.00 0.00 3.16
2646 6258 3.621558 GGCTAGCAAGTTTTAGTCCCAT 58.378 45.455 18.24 0.00 0.00 4.00
2647 6259 2.290705 GGGCTAGCAAGTTTTAGTCCCA 60.291 50.000 18.24 0.00 35.98 4.37
2648 6260 2.026169 AGGGCTAGCAAGTTTTAGTCCC 60.026 50.000 18.24 3.52 41.57 4.46
2649 6261 3.351794 AGGGCTAGCAAGTTTTAGTCC 57.648 47.619 18.24 4.07 41.07 3.85
2650 6262 4.190001 GGTAGGGCTAGCAAGTTTTAGTC 58.810 47.826 18.24 0.00 34.00 2.59
2651 6263 3.054582 GGGTAGGGCTAGCAAGTTTTAGT 60.055 47.826 18.24 0.00 35.41 2.24
2652 6264 3.054655 TGGGTAGGGCTAGCAAGTTTTAG 60.055 47.826 18.24 0.00 35.41 1.85
2653 6265 2.914278 TGGGTAGGGCTAGCAAGTTTTA 59.086 45.455 18.24 0.00 35.41 1.52
2654 6266 1.708551 TGGGTAGGGCTAGCAAGTTTT 59.291 47.619 18.24 0.00 35.41 2.43
2655 6267 1.368374 TGGGTAGGGCTAGCAAGTTT 58.632 50.000 18.24 0.00 35.41 2.66
2656 6268 1.212935 CATGGGTAGGGCTAGCAAGTT 59.787 52.381 18.24 0.82 35.41 2.66
2657 6269 0.839946 CATGGGTAGGGCTAGCAAGT 59.160 55.000 18.24 2.28 35.41 3.16
2658 6270 0.536006 GCATGGGTAGGGCTAGCAAG 60.536 60.000 18.24 0.00 35.41 4.01
2659 6271 0.988145 AGCATGGGTAGGGCTAGCAA 60.988 55.000 18.24 0.00 35.82 3.91
2660 6272 0.988145 AAGCATGGGTAGGGCTAGCA 60.988 55.000 18.24 0.00 36.76 3.49
2661 6273 0.536006 CAAGCATGGGTAGGGCTAGC 60.536 60.000 6.04 6.04 36.76 3.42
2662 6274 0.109342 CCAAGCATGGGTAGGGCTAG 59.891 60.000 0.00 0.00 43.51 3.42
2663 6275 2.230664 CCAAGCATGGGTAGGGCTA 58.769 57.895 0.00 0.00 43.51 3.93
2664 6276 3.010144 CCAAGCATGGGTAGGGCT 58.990 61.111 0.00 0.00 43.51 5.19
2678 6290 8.660295 TTAGTCTCTTTAGTACTTGGATCCAA 57.340 34.615 25.53 25.53 0.00 3.53
2679 6291 8.660295 TTTAGTCTCTTTAGTACTTGGATCCA 57.340 34.615 11.44 11.44 0.00 3.41
2694 6306 9.507329 TGCTCATTAACTTGATTTTAGTCTCTT 57.493 29.630 0.00 0.00 0.00 2.85
2695 6307 9.678260 ATGCTCATTAACTTGATTTTAGTCTCT 57.322 29.630 0.00 0.00 0.00 3.10
2708 6320 9.866655 TGGAGGATAATAAATGCTCATTAACTT 57.133 29.630 8.48 0.00 38.10 2.66
2709 6321 9.866655 TTGGAGGATAATAAATGCTCATTAACT 57.133 29.630 8.48 0.00 38.10 2.24
2712 6324 9.077885 GGTTTGGAGGATAATAAATGCTCATTA 57.922 33.333 8.48 0.00 38.10 1.90
2713 6325 7.015584 GGGTTTGGAGGATAATAAATGCTCATT 59.984 37.037 8.48 0.00 38.10 2.57
2714 6326 6.494835 GGGTTTGGAGGATAATAAATGCTCAT 59.505 38.462 8.48 0.00 38.10 2.90
2715 6327 5.833131 GGGTTTGGAGGATAATAAATGCTCA 59.167 40.000 8.48 0.00 38.10 4.26
2716 6328 6.071320 AGGGTTTGGAGGATAATAAATGCTC 58.929 40.000 0.00 0.00 36.02 4.26
2717 6329 6.030727 AGGGTTTGGAGGATAATAAATGCT 57.969 37.500 0.00 0.00 0.00 3.79
2718 6330 5.243954 GGAGGGTTTGGAGGATAATAAATGC 59.756 44.000 0.00 0.00 0.00 3.56
2719 6331 6.372931 TGGAGGGTTTGGAGGATAATAAATG 58.627 40.000 0.00 0.00 0.00 2.32
2720 6332 6.606241 TGGAGGGTTTGGAGGATAATAAAT 57.394 37.500 0.00 0.00 0.00 1.40
2721 6333 6.410222 TTGGAGGGTTTGGAGGATAATAAA 57.590 37.500 0.00 0.00 0.00 1.40
2722 6334 6.411554 GGATTGGAGGGTTTGGAGGATAATAA 60.412 42.308 0.00 0.00 0.00 1.40
2723 6335 5.074515 GGATTGGAGGGTTTGGAGGATAATA 59.925 44.000 0.00 0.00 0.00 0.98
2724 6336 4.140924 GGATTGGAGGGTTTGGAGGATAAT 60.141 45.833 0.00 0.00 0.00 1.28
2725 6337 3.204382 GGATTGGAGGGTTTGGAGGATAA 59.796 47.826 0.00 0.00 0.00 1.75
2726 6338 2.783510 GGATTGGAGGGTTTGGAGGATA 59.216 50.000 0.00 0.00 0.00 2.59
2727 6339 1.570979 GGATTGGAGGGTTTGGAGGAT 59.429 52.381 0.00 0.00 0.00 3.24
2728 6340 0.999712 GGATTGGAGGGTTTGGAGGA 59.000 55.000 0.00 0.00 0.00 3.71
2729 6341 0.704076 TGGATTGGAGGGTTTGGAGG 59.296 55.000 0.00 0.00 0.00 4.30
2730 6342 1.635487 TCTGGATTGGAGGGTTTGGAG 59.365 52.381 0.00 0.00 0.00 3.86
2731 6343 1.753903 TCTGGATTGGAGGGTTTGGA 58.246 50.000 0.00 0.00 0.00 3.53
2732 6344 2.171003 GTTCTGGATTGGAGGGTTTGG 58.829 52.381 0.00 0.00 0.00 3.28
2733 6345 3.084786 GAGTTCTGGATTGGAGGGTTTG 58.915 50.000 0.00 0.00 0.00 2.93
2734 6346 2.290323 CGAGTTCTGGATTGGAGGGTTT 60.290 50.000 0.00 0.00 0.00 3.27
2735 6347 1.279271 CGAGTTCTGGATTGGAGGGTT 59.721 52.381 0.00 0.00 0.00 4.11
2736 6348 0.905357 CGAGTTCTGGATTGGAGGGT 59.095 55.000 0.00 0.00 0.00 4.34
2737 6349 0.462759 GCGAGTTCTGGATTGGAGGG 60.463 60.000 0.00 0.00 0.00 4.30
2738 6350 0.462759 GGCGAGTTCTGGATTGGAGG 60.463 60.000 0.00 0.00 0.00 4.30
2739 6351 0.462759 GGGCGAGTTCTGGATTGGAG 60.463 60.000 0.00 0.00 0.00 3.86
2740 6352 1.602237 GGGCGAGTTCTGGATTGGA 59.398 57.895 0.00 0.00 0.00 3.53
2741 6353 1.815421 CGGGCGAGTTCTGGATTGG 60.815 63.158 0.00 0.00 0.00 3.16
2742 6354 1.079127 ACGGGCGAGTTCTGGATTG 60.079 57.895 0.00 0.00 0.00 2.67
2743 6355 1.079127 CACGGGCGAGTTCTGGATT 60.079 57.895 0.00 0.00 0.00 3.01
2744 6356 1.827399 AACACGGGCGAGTTCTGGAT 61.827 55.000 0.00 0.00 0.00 3.41
2745 6357 1.180456 TAACACGGGCGAGTTCTGGA 61.180 55.000 0.00 0.00 31.81 3.86
2746 6358 0.320073 TTAACACGGGCGAGTTCTGG 60.320 55.000 0.00 0.00 31.81 3.86
2747 6359 1.459592 CTTTAACACGGGCGAGTTCTG 59.540 52.381 0.00 0.00 31.81 3.02
2748 6360 1.607251 CCTTTAACACGGGCGAGTTCT 60.607 52.381 0.00 0.00 31.81 3.01
2749 6361 0.794473 CCTTTAACACGGGCGAGTTC 59.206 55.000 0.00 0.00 31.81 3.01
2750 6362 0.393820 TCCTTTAACACGGGCGAGTT 59.606 50.000 0.00 0.00 33.77 3.01
2751 6363 0.037605 CTCCTTTAACACGGGCGAGT 60.038 55.000 0.00 0.00 0.00 4.18
2752 6364 0.245539 TCTCCTTTAACACGGGCGAG 59.754 55.000 0.00 0.00 0.00 5.03
2753 6365 0.245539 CTCTCCTTTAACACGGGCGA 59.754 55.000 0.00 0.00 0.00 5.54
2754 6366 0.739813 CCTCTCCTTTAACACGGGCG 60.740 60.000 0.00 0.00 0.00 6.13
2755 6367 0.611714 TCCTCTCCTTTAACACGGGC 59.388 55.000 0.00 0.00 0.00 6.13
2756 6368 1.900486 ACTCCTCTCCTTTAACACGGG 59.100 52.381 0.00 0.00 0.00 5.28
2757 6369 3.679824 AACTCCTCTCCTTTAACACGG 57.320 47.619 0.00 0.00 0.00 4.94
2758 6370 6.872020 TCATTTAACTCCTCTCCTTTAACACG 59.128 38.462 0.00 0.00 0.00 4.49
2759 6371 7.334671 CCTCATTTAACTCCTCTCCTTTAACAC 59.665 40.741 0.00 0.00 0.00 3.32
2760 6372 7.236847 TCCTCATTTAACTCCTCTCCTTTAACA 59.763 37.037 0.00 0.00 0.00 2.41
2761 6373 7.621796 TCCTCATTTAACTCCTCTCCTTTAAC 58.378 38.462 0.00 0.00 0.00 2.01
2762 6374 7.678598 TCTCCTCATTTAACTCCTCTCCTTTAA 59.321 37.037 0.00 0.00 0.00 1.52
2763 6375 7.189794 TCTCCTCATTTAACTCCTCTCCTTTA 58.810 38.462 0.00 0.00 0.00 1.85
2764 6376 6.026186 TCTCCTCATTTAACTCCTCTCCTTT 58.974 40.000 0.00 0.00 0.00 3.11
2765 6377 5.594777 TCTCCTCATTTAACTCCTCTCCTT 58.405 41.667 0.00 0.00 0.00 3.36
2766 6378 5.043732 TCTCTCCTCATTTAACTCCTCTCCT 60.044 44.000 0.00 0.00 0.00 3.69
2767 6379 5.205056 TCTCTCCTCATTTAACTCCTCTCC 58.795 45.833 0.00 0.00 0.00 3.71
2768 6380 6.126409 TCTCTCTCCTCATTTAACTCCTCTC 58.874 44.000 0.00 0.00 0.00 3.20
2769 6381 6.086011 TCTCTCTCCTCATTTAACTCCTCT 57.914 41.667 0.00 0.00 0.00 3.69
2770 6382 5.301805 CCTCTCTCTCCTCATTTAACTCCTC 59.698 48.000 0.00 0.00 0.00 3.71
2771 6383 5.043732 TCCTCTCTCTCCTCATTTAACTCCT 60.044 44.000 0.00 0.00 0.00 3.69
2772 6384 5.068591 GTCCTCTCTCTCCTCATTTAACTCC 59.931 48.000 0.00 0.00 0.00 3.85
2773 6385 5.891551 AGTCCTCTCTCTCCTCATTTAACTC 59.108 44.000 0.00 0.00 0.00 3.01
2774 6386 5.837829 AGTCCTCTCTCTCCTCATTTAACT 58.162 41.667 0.00 0.00 0.00 2.24
2775 6387 7.648039 TTAGTCCTCTCTCTCCTCATTTAAC 57.352 40.000 0.00 0.00 0.00 2.01
2776 6388 7.507616 GGATTAGTCCTCTCTCTCCTCATTTAA 59.492 40.741 0.00 0.00 41.60 1.52
2777 6389 7.007723 GGATTAGTCCTCTCTCTCCTCATTTA 58.992 42.308 0.00 0.00 41.60 1.40
2778 6390 5.838521 GGATTAGTCCTCTCTCTCCTCATTT 59.161 44.000 0.00 0.00 41.60 2.32
2779 6391 5.103301 TGGATTAGTCCTCTCTCTCCTCATT 60.103 44.000 5.79 0.00 45.32 2.57
2780 6392 4.418526 TGGATTAGTCCTCTCTCTCCTCAT 59.581 45.833 5.79 0.00 45.32 2.90
2781 6393 3.788708 TGGATTAGTCCTCTCTCTCCTCA 59.211 47.826 5.79 0.00 45.32 3.86
2782 6394 4.142038 GTGGATTAGTCCTCTCTCTCCTC 58.858 52.174 5.79 0.00 45.32 3.71
2783 6395 3.529734 TGTGGATTAGTCCTCTCTCTCCT 59.470 47.826 5.79 0.00 45.32 3.69
2784 6396 3.904717 TGTGGATTAGTCCTCTCTCTCC 58.095 50.000 5.79 0.00 45.32 3.71
2785 6397 6.478512 AAATGTGGATTAGTCCTCTCTCTC 57.521 41.667 5.79 0.00 45.32 3.20
2786 6398 6.882768 AAAATGTGGATTAGTCCTCTCTCT 57.117 37.500 5.79 0.00 45.32 3.10
2787 6399 7.787028 ACTAAAATGTGGATTAGTCCTCTCTC 58.213 38.462 5.79 0.00 45.32 3.20
2788 6400 7.741554 ACTAAAATGTGGATTAGTCCTCTCT 57.258 36.000 5.79 0.00 45.32 3.10
2789 6401 8.145122 CCTACTAAAATGTGGATTAGTCCTCTC 58.855 40.741 5.79 0.00 45.32 3.20
2790 6402 7.071321 CCCTACTAAAATGTGGATTAGTCCTCT 59.929 40.741 5.79 0.00 45.32 3.69
2791 6403 7.217906 CCCTACTAAAATGTGGATTAGTCCTC 58.782 42.308 5.79 2.58 45.32 3.71
2792 6404 6.101296 CCCCTACTAAAATGTGGATTAGTCCT 59.899 42.308 5.79 0.00 45.32 3.85
2793 6405 6.126565 ACCCCTACTAAAATGTGGATTAGTCC 60.127 42.308 0.00 0.00 40.53 3.85
2794 6406 6.896883 ACCCCTACTAAAATGTGGATTAGTC 58.103 40.000 1.78 0.00 40.53 2.59
2795 6407 6.903340 ACCCCTACTAAAATGTGGATTAGT 57.097 37.500 3.93 3.93 43.05 2.24
2796 6408 7.222161 GGTACCCCTACTAAAATGTGGATTAG 58.778 42.308 0.00 0.00 35.67 1.73
2797 6409 7.140522 GGTACCCCTACTAAAATGTGGATTA 57.859 40.000 0.00 0.00 0.00 1.75
2798 6410 6.009908 GGTACCCCTACTAAAATGTGGATT 57.990 41.667 0.00 0.00 0.00 3.01
2799 6411 5.641789 GGTACCCCTACTAAAATGTGGAT 57.358 43.478 0.00 0.00 0.00 3.41
2816 6428 7.444629 CTAAAAACTTTTAGTCAGGGGTACC 57.555 40.000 2.17 2.17 45.11 3.34
2835 6447 8.843262 GGGCTAAAACTAGTTTTGAGACTAAAA 58.157 33.333 33.75 15.97 42.18 1.52
2836 6448 7.446319 GGGGCTAAAACTAGTTTTGAGACTAAA 59.554 37.037 33.75 16.57 42.18 1.85
2837 6449 6.938596 GGGGCTAAAACTAGTTTTGAGACTAA 59.061 38.462 33.75 17.17 42.18 2.24
2838 6450 6.271624 AGGGGCTAAAACTAGTTTTGAGACTA 59.728 38.462 33.75 17.77 42.18 2.59
2839 6451 5.073280 AGGGGCTAAAACTAGTTTTGAGACT 59.927 40.000 33.75 23.58 42.18 3.24
2840 6452 5.314529 AGGGGCTAAAACTAGTTTTGAGAC 58.685 41.667 33.75 27.33 42.18 3.36
2841 6453 5.309806 AGAGGGGCTAAAACTAGTTTTGAGA 59.690 40.000 33.75 18.98 42.18 3.27
2842 6454 5.561679 AGAGGGGCTAAAACTAGTTTTGAG 58.438 41.667 33.75 26.55 42.18 3.02
2843 6455 5.578157 AGAGGGGCTAAAACTAGTTTTGA 57.422 39.130 33.75 20.41 42.18 2.69
2844 6456 6.650427 AAAGAGGGGCTAAAACTAGTTTTG 57.350 37.500 33.75 25.36 42.18 2.44
2845 6457 7.524290 ACTAAAGAGGGGCTAAAACTAGTTTT 58.476 34.615 30.62 30.62 44.16 2.43
2846 6458 7.087895 ACTAAAGAGGGGCTAAAACTAGTTT 57.912 36.000 15.22 15.22 0.00 2.66
2847 6459 6.271624 TGACTAAAGAGGGGCTAAAACTAGTT 59.728 38.462 1.12 1.12 0.00 2.24
2848 6460 5.783875 TGACTAAAGAGGGGCTAAAACTAGT 59.216 40.000 0.00 0.00 0.00 2.57
2849 6461 6.295719 TGACTAAAGAGGGGCTAAAACTAG 57.704 41.667 0.00 0.00 0.00 2.57
2850 6462 5.189145 CCTGACTAAAGAGGGGCTAAAACTA 59.811 44.000 0.00 0.00 0.00 2.24
2851 6463 4.019231 CCTGACTAAAGAGGGGCTAAAACT 60.019 45.833 0.00 0.00 0.00 2.66
2852 6464 4.262617 CCTGACTAAAGAGGGGCTAAAAC 58.737 47.826 0.00 0.00 0.00 2.43
2853 6465 3.308188 GCCTGACTAAAGAGGGGCTAAAA 60.308 47.826 0.00 0.00 35.45 1.52
2854 6466 2.238898 GCCTGACTAAAGAGGGGCTAAA 59.761 50.000 0.00 0.00 35.45 1.85
2855 6467 1.838077 GCCTGACTAAAGAGGGGCTAA 59.162 52.381 0.00 0.00 35.45 3.09
2856 6468 1.497161 GCCTGACTAAAGAGGGGCTA 58.503 55.000 0.00 0.00 35.45 3.93
2857 6469 1.617947 CGCCTGACTAAAGAGGGGCT 61.618 60.000 0.00 0.00 35.71 5.19
2858 6470 1.153349 CGCCTGACTAAAGAGGGGC 60.153 63.158 0.00 0.00 35.71 5.80
2859 6471 0.108138 CACGCCTGACTAAAGAGGGG 60.108 60.000 0.00 0.00 45.57 4.79
2860 6472 0.741221 GCACGCCTGACTAAAGAGGG 60.741 60.000 0.00 0.00 0.00 4.30
2861 6473 0.247736 AGCACGCCTGACTAAAGAGG 59.752 55.000 0.00 0.00 0.00 3.69
2862 6474 1.728971 CAAGCACGCCTGACTAAAGAG 59.271 52.381 0.00 0.00 0.00 2.85
2863 6475 1.608025 CCAAGCACGCCTGACTAAAGA 60.608 52.381 0.00 0.00 0.00 2.52
2864 6476 0.798776 CCAAGCACGCCTGACTAAAG 59.201 55.000 0.00 0.00 0.00 1.85
2865 6477 0.394938 TCCAAGCACGCCTGACTAAA 59.605 50.000 0.00 0.00 0.00 1.85
2866 6478 0.394938 TTCCAAGCACGCCTGACTAA 59.605 50.000 0.00 0.00 0.00 2.24
2867 6479 0.320421 GTTCCAAGCACGCCTGACTA 60.320 55.000 0.00 0.00 0.00 2.59
2868 6480 1.598130 GTTCCAAGCACGCCTGACT 60.598 57.895 0.00 0.00 0.00 3.41
2869 6481 1.166531 AAGTTCCAAGCACGCCTGAC 61.167 55.000 0.00 0.00 0.00 3.51
2870 6482 0.465460 AAAGTTCCAAGCACGCCTGA 60.465 50.000 0.00 0.00 0.00 3.86
2871 6483 1.197721 CTAAAGTTCCAAGCACGCCTG 59.802 52.381 0.00 0.00 0.00 4.85
2872 6484 1.523758 CTAAAGTTCCAAGCACGCCT 58.476 50.000 0.00 0.00 0.00 5.52
2873 6485 0.109735 GCTAAAGTTCCAAGCACGCC 60.110 55.000 0.00 0.00 36.26 5.68
2874 6486 0.109735 GGCTAAAGTTCCAAGCACGC 60.110 55.000 7.02 0.00 38.01 5.34
2875 6487 1.464997 GAGGCTAAAGTTCCAAGCACG 59.535 52.381 0.00 0.00 38.01 5.34
2876 6488 2.784347 AGAGGCTAAAGTTCCAAGCAC 58.216 47.619 0.00 2.09 38.01 4.40
2877 6489 3.508845 AAGAGGCTAAAGTTCCAAGCA 57.491 42.857 0.00 0.00 38.01 3.91
2878 6490 5.705905 TCTTTAAGAGGCTAAAGTTCCAAGC 59.294 40.000 7.84 0.00 39.12 4.01
2879 6491 7.118535 GTCTCTTTAAGAGGCTAAAGTTCCAAG 59.881 40.741 18.21 0.00 43.38 3.61
2880 6492 6.935208 GTCTCTTTAAGAGGCTAAAGTTCCAA 59.065 38.462 18.21 0.00 43.38 3.53
2881 6493 6.465084 GTCTCTTTAAGAGGCTAAAGTTCCA 58.535 40.000 18.21 0.00 43.38 3.53
2882 6494 6.971527 GTCTCTTTAAGAGGCTAAAGTTCC 57.028 41.667 18.21 0.00 43.38 3.62
2891 6503 9.654663 TGACTAAAAATAGTCTCTTTAAGAGGC 57.345 33.333 17.87 17.87 46.94 4.70
2929 6541 6.473758 ACCATTTTTCTACTAGTGAAGGGAC 58.526 40.000 5.39 0.00 0.00 4.46
2930 6542 6.271391 TGACCATTTTTCTACTAGTGAAGGGA 59.729 38.462 5.39 0.00 0.00 4.20
2931 6543 6.472887 TGACCATTTTTCTACTAGTGAAGGG 58.527 40.000 5.39 6.32 0.00 3.95
2950 6562 1.676968 CAACCGGGACAGATGACCA 59.323 57.895 6.32 0.00 0.00 4.02
3041 6653 1.000171 GTCCCGGTTCGTGTAAGAACT 60.000 52.381 0.00 0.00 46.99 3.01
3134 6746 0.251787 GTGGATGCCTTTTGGTCCCT 60.252 55.000 0.00 0.00 42.99 4.20
3267 6883 3.435671 GCAGTAGCGTTGGTAAATCAAGT 59.564 43.478 0.00 0.00 0.00 3.16
3422 7041 6.098124 GGGTGAAATGAACATGGATTGGAATA 59.902 38.462 0.00 0.00 0.00 1.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.