Multiple sequence alignment - TraesCS3D01G502900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G502900 chr3D 100.000 2231 0 0 1 2231 591104403 591102173 0.000000e+00 4120.0
1 TraesCS3D01G502900 chr3D 93.651 189 11 1 1823 2011 467257997 467257810 4.690000e-72 281.0
2 TraesCS3D01G502900 chr3D 93.617 188 10 2 1823 2010 185049909 185049724 1.690000e-71 279.0
3 TraesCS3D01G502900 chr3B 86.780 1649 121 51 217 1795 792344914 792343293 0.000000e+00 1748.0
4 TraesCS3D01G502900 chr3B 86.683 1652 123 51 214 1795 793394973 793396597 0.000000e+00 1742.0
5 TraesCS3D01G502900 chr3B 86.659 1649 123 54 217 1795 792435235 792433614 0.000000e+00 1736.0
6 TraesCS3D01G502900 chr3B 83.641 434 31 18 336 750 791891389 791890977 2.710000e-99 372.0
7 TraesCS3D01G502900 chr3B 92.265 181 9 5 2043 2220 792342968 792342790 3.680000e-63 252.0
8 TraesCS3D01G502900 chr3B 92.265 181 9 5 2043 2220 792433289 792433111 3.680000e-63 252.0
9 TraesCS3D01G502900 chr3B 92.265 181 9 5 2043 2220 793396922 793397100 3.680000e-63 252.0
10 TraesCS3D01G502900 chr3B 94.340 53 1 1 1990 2042 793285110 793285160 1.840000e-11 80.5
11 TraesCS3D01G502900 chr3B 94.340 53 1 1 1990 2042 793300080 793300130 1.840000e-11 80.5
12 TraesCS3D01G502900 chrUn 86.622 1652 124 51 214 1795 155032441 155034065 0.000000e+00 1736.0
13 TraesCS3D01G502900 chrUn 96.098 205 7 1 217 421 352277482 352277279 1.280000e-87 333.0
14 TraesCS3D01G502900 chrUn 91.713 181 10 5 2043 2220 155034390 155034568 1.710000e-61 246.0
15 TraesCS3D01G502900 chr3A 90.572 647 28 9 221 843 721462955 721462318 0.000000e+00 826.0
16 TraesCS3D01G502900 chr3A 92.490 253 18 1 841 1093 721462173 721461922 5.860000e-96 361.0
17 TraesCS3D01G502900 chr3A 96.330 218 8 0 1 218 634076277 634076060 2.110000e-95 359.0
18 TraesCS3D01G502900 chr1A 95.413 218 10 0 1 218 585639384 585639167 4.560000e-92 348.0
19 TraesCS3D01G502900 chr1A 96.875 64 2 0 1 64 590114998 590114935 8.420000e-20 108.0
20 TraesCS3D01G502900 chr5B 92.202 218 16 1 1 218 657203147 657203363 7.740000e-80 307.0
21 TraesCS3D01G502900 chr7B 95.604 182 6 2 1815 1995 427701753 427701933 7.790000e-75 291.0
22 TraesCS3D01G502900 chr6D 95.082 183 7 2 1822 2003 389700710 389700529 1.010000e-73 287.0
23 TraesCS3D01G502900 chr2D 94.149 188 10 1 1823 2010 602953958 602953772 3.630000e-73 285.0
24 TraesCS3D01G502900 chr2D 93.617 188 11 1 1823 2010 272176760 272176574 1.690000e-71 279.0
25 TraesCS3D01G502900 chr2D 93.617 188 11 1 1823 2010 309243829 309243643 1.690000e-71 279.0
26 TraesCS3D01G502900 chr2D 93.617 188 11 1 1823 2010 515499464 515499278 1.690000e-71 279.0
27 TraesCS3D01G502900 chr4D 93.194 191 12 1 1820 2010 216066936 216067125 1.690000e-71 279.0
28 TraesCS3D01G502900 chr2B 82.927 246 33 6 996 1235 680221358 680221600 1.740000e-51 213.0
29 TraesCS3D01G502900 chr2B 78.440 218 45 2 2 218 669244355 669244139 8.310000e-30 141.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G502900 chr3D 591102173 591104403 2230 True 4120.0 4120 100.0000 1 2231 1 chr3D.!!$R3 2230
1 TraesCS3D01G502900 chr3B 792342790 792344914 2124 True 1000.0 1748 89.5225 217 2220 2 chr3B.!!$R2 2003
2 TraesCS3D01G502900 chr3B 793394973 793397100 2127 False 997.0 1742 89.4740 214 2220 2 chr3B.!!$F3 2006
3 TraesCS3D01G502900 chr3B 792433111 792435235 2124 True 994.0 1736 89.4620 217 2220 2 chr3B.!!$R3 2003
4 TraesCS3D01G502900 chrUn 155032441 155034568 2127 False 991.0 1736 89.1675 214 2220 2 chrUn.!!$F1 2006
5 TraesCS3D01G502900 chr3A 721461922 721462955 1033 True 593.5 826 91.5310 221 1093 2 chr3A.!!$R2 872

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
124 125 0.322997 CCACTAATTCCCGCCAACCA 60.323 55.0 0.0 0.0 0.0 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1639 1861 0.173708 CCGGAGCTCTACACCAACTC 59.826 60.0 14.64 0.0 0.0 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.046938 AGCTACACAGGTATTCACATCG 57.953 45.455 0.00 0.00 0.00 3.84
24 25 3.699538 AGCTACACAGGTATTCACATCGA 59.300 43.478 0.00 0.00 0.00 3.59
25 26 4.159693 AGCTACACAGGTATTCACATCGAA 59.840 41.667 0.00 0.00 38.22 3.71
26 27 5.050490 GCTACACAGGTATTCACATCGAAT 58.950 41.667 0.00 0.00 46.36 3.34
27 28 6.040504 AGCTACACAGGTATTCACATCGAATA 59.959 38.462 0.00 0.00 42.76 1.75
28 29 6.700081 GCTACACAGGTATTCACATCGAATAA 59.300 38.462 0.00 0.00 45.91 1.40
29 30 7.223971 GCTACACAGGTATTCACATCGAATAAA 59.776 37.037 0.00 0.00 45.91 1.40
30 31 9.261180 CTACACAGGTATTCACATCGAATAAAT 57.739 33.333 0.00 0.00 45.91 1.40
31 32 8.142994 ACACAGGTATTCACATCGAATAAATC 57.857 34.615 0.00 0.00 45.91 2.17
32 33 7.987458 ACACAGGTATTCACATCGAATAAATCT 59.013 33.333 0.00 0.00 45.91 2.40
33 34 8.830580 CACAGGTATTCACATCGAATAAATCTT 58.169 33.333 0.00 0.00 45.91 2.40
34 35 9.046296 ACAGGTATTCACATCGAATAAATCTTC 57.954 33.333 0.00 0.00 45.91 2.87
35 36 8.499162 CAGGTATTCACATCGAATAAATCTTCC 58.501 37.037 0.00 0.00 45.91 3.46
36 37 7.661847 AGGTATTCACATCGAATAAATCTTCCC 59.338 37.037 0.00 0.00 45.91 3.97
37 38 7.661847 GGTATTCACATCGAATAAATCTTCCCT 59.338 37.037 0.00 0.00 45.91 4.20
38 39 9.706691 GTATTCACATCGAATAAATCTTCCCTA 57.293 33.333 0.00 0.00 45.91 3.53
40 41 8.433421 TTCACATCGAATAAATCTTCCCTAAC 57.567 34.615 0.00 0.00 0.00 2.34
41 42 6.990349 TCACATCGAATAAATCTTCCCTAACC 59.010 38.462 0.00 0.00 0.00 2.85
42 43 6.204882 CACATCGAATAAATCTTCCCTAACCC 59.795 42.308 0.00 0.00 0.00 4.11
43 44 5.300411 TCGAATAAATCTTCCCTAACCCC 57.700 43.478 0.00 0.00 0.00 4.95
44 45 4.103627 TCGAATAAATCTTCCCTAACCCCC 59.896 45.833 0.00 0.00 0.00 5.40
45 46 4.141344 CGAATAAATCTTCCCTAACCCCCA 60.141 45.833 0.00 0.00 0.00 4.96
46 47 5.457633 CGAATAAATCTTCCCTAACCCCCAT 60.458 44.000 0.00 0.00 0.00 4.00
47 48 6.240060 CGAATAAATCTTCCCTAACCCCCATA 60.240 42.308 0.00 0.00 0.00 2.74
48 49 7.488889 AATAAATCTTCCCTAACCCCCATAA 57.511 36.000 0.00 0.00 0.00 1.90
49 50 5.403558 AAATCTTCCCTAACCCCCATAAG 57.596 43.478 0.00 0.00 0.00 1.73
50 51 2.132686 TCTTCCCTAACCCCCATAAGC 58.867 52.381 0.00 0.00 0.00 3.09
51 52 1.850345 CTTCCCTAACCCCCATAAGCA 59.150 52.381 0.00 0.00 0.00 3.91
52 53 1.988539 TCCCTAACCCCCATAAGCAA 58.011 50.000 0.00 0.00 0.00 3.91
53 54 1.567175 TCCCTAACCCCCATAAGCAAC 59.433 52.381 0.00 0.00 0.00 4.17
54 55 1.411074 CCCTAACCCCCATAAGCAACC 60.411 57.143 0.00 0.00 0.00 3.77
55 56 1.411074 CCTAACCCCCATAAGCAACCC 60.411 57.143 0.00 0.00 0.00 4.11
56 57 0.632294 TAACCCCCATAAGCAACCCC 59.368 55.000 0.00 0.00 0.00 4.95
57 58 2.176202 AACCCCCATAAGCAACCCCC 62.176 60.000 0.00 0.00 0.00 5.40
71 72 3.579302 CCCCCTGAAGCACCCACA 61.579 66.667 0.00 0.00 0.00 4.17
72 73 2.034687 CCCCTGAAGCACCCACAG 59.965 66.667 0.00 0.00 0.00 3.66
73 74 2.674380 CCCTGAAGCACCCACAGC 60.674 66.667 0.00 0.00 0.00 4.40
74 75 2.433446 CCTGAAGCACCCACAGCT 59.567 61.111 0.00 0.00 45.97 4.24
75 76 1.970114 CCTGAAGCACCCACAGCTG 60.970 63.158 13.48 13.48 42.53 4.24
76 77 1.970114 CTGAAGCACCCACAGCTGG 60.970 63.158 19.93 6.95 42.53 4.85
77 78 2.113986 GAAGCACCCACAGCTGGT 59.886 61.111 19.93 3.02 42.53 4.00
78 79 1.529244 GAAGCACCCACAGCTGGTT 60.529 57.895 19.93 1.59 42.53 3.67
79 80 1.799258 GAAGCACCCACAGCTGGTTG 61.799 60.000 19.93 8.08 42.53 3.77
81 82 3.297620 CACCCACAGCTGGTTGCC 61.298 66.667 19.93 0.00 44.23 4.52
82 83 3.819652 ACCCACAGCTGGTTGCCA 61.820 61.111 19.93 0.00 44.23 4.92
94 95 3.660970 TGGTTGCCAGAGCCATATAAA 57.339 42.857 0.00 0.00 38.69 1.40
95 96 4.183223 TGGTTGCCAGAGCCATATAAAT 57.817 40.909 0.00 0.00 38.69 1.40
96 97 3.890756 TGGTTGCCAGAGCCATATAAATG 59.109 43.478 0.00 0.00 38.69 2.32
97 98 3.891366 GGTTGCCAGAGCCATATAAATGT 59.109 43.478 0.00 0.00 38.69 2.71
98 99 5.070001 GGTTGCCAGAGCCATATAAATGTA 58.930 41.667 0.00 0.00 38.69 2.29
99 100 5.534654 GGTTGCCAGAGCCATATAAATGTAA 59.465 40.000 0.00 0.00 38.69 2.41
100 101 6.040391 GGTTGCCAGAGCCATATAAATGTAAA 59.960 38.462 0.00 0.00 38.69 2.01
101 102 7.417342 GGTTGCCAGAGCCATATAAATGTAAAA 60.417 37.037 0.00 0.00 38.69 1.52
102 103 7.838079 TGCCAGAGCCATATAAATGTAAAAT 57.162 32.000 0.00 0.00 38.69 1.82
103 104 8.248904 TGCCAGAGCCATATAAATGTAAAATT 57.751 30.769 0.00 0.00 38.69 1.82
104 105 9.360901 TGCCAGAGCCATATAAATGTAAAATTA 57.639 29.630 0.00 0.00 38.69 1.40
105 106 9.626045 GCCAGAGCCATATAAATGTAAAATTAC 57.374 33.333 0.00 0.00 0.00 1.89
118 119 6.439675 TGTAAAATTACCACTAATTCCCGC 57.560 37.500 1.13 0.00 32.29 6.13
119 120 4.994907 AAAATTACCACTAATTCCCGCC 57.005 40.909 0.00 0.00 32.29 6.13
120 121 3.655615 AATTACCACTAATTCCCGCCA 57.344 42.857 0.00 0.00 27.83 5.69
121 122 3.655615 ATTACCACTAATTCCCGCCAA 57.344 42.857 0.00 0.00 0.00 4.52
122 123 2.406596 TACCACTAATTCCCGCCAAC 57.593 50.000 0.00 0.00 0.00 3.77
123 124 0.323087 ACCACTAATTCCCGCCAACC 60.323 55.000 0.00 0.00 0.00 3.77
124 125 0.322997 CCACTAATTCCCGCCAACCA 60.323 55.000 0.00 0.00 0.00 3.67
125 126 1.684869 CCACTAATTCCCGCCAACCAT 60.685 52.381 0.00 0.00 0.00 3.55
126 127 1.405105 CACTAATTCCCGCCAACCATG 59.595 52.381 0.00 0.00 0.00 3.66
140 141 3.012518 CAACCATGGATCAGTGAAGTCC 58.987 50.000 21.47 5.90 0.00 3.85
141 142 2.555664 ACCATGGATCAGTGAAGTCCT 58.444 47.619 21.47 0.00 33.15 3.85
142 143 2.915604 ACCATGGATCAGTGAAGTCCTT 59.084 45.455 21.47 5.13 33.15 3.36
143 144 3.331889 ACCATGGATCAGTGAAGTCCTTT 59.668 43.478 21.47 0.15 33.15 3.11
144 145 4.202609 ACCATGGATCAGTGAAGTCCTTTT 60.203 41.667 21.47 0.00 33.15 2.27
145 146 4.768968 CCATGGATCAGTGAAGTCCTTTTT 59.231 41.667 5.56 0.00 33.15 1.94
146 147 5.105997 CCATGGATCAGTGAAGTCCTTTTTC 60.106 44.000 5.56 0.00 33.15 2.29
147 148 5.310409 TGGATCAGTGAAGTCCTTTTTCT 57.690 39.130 12.87 0.00 33.15 2.52
148 149 5.694995 TGGATCAGTGAAGTCCTTTTTCTT 58.305 37.500 12.87 0.00 33.15 2.52
149 150 6.837312 TGGATCAGTGAAGTCCTTTTTCTTA 58.163 36.000 12.87 0.00 33.15 2.10
150 151 7.461749 TGGATCAGTGAAGTCCTTTTTCTTAT 58.538 34.615 12.87 0.00 33.15 1.73
151 152 7.944554 TGGATCAGTGAAGTCCTTTTTCTTATT 59.055 33.333 12.87 0.00 33.15 1.40
152 153 8.454894 GGATCAGTGAAGTCCTTTTTCTTATTC 58.545 37.037 5.64 0.00 0.00 1.75
153 154 9.225436 GATCAGTGAAGTCCTTTTTCTTATTCT 57.775 33.333 0.00 0.00 0.00 2.40
154 155 8.608844 TCAGTGAAGTCCTTTTTCTTATTCTC 57.391 34.615 0.00 0.00 0.00 2.87
155 156 8.432805 TCAGTGAAGTCCTTTTTCTTATTCTCT 58.567 33.333 0.00 0.00 0.00 3.10
156 157 9.061435 CAGTGAAGTCCTTTTTCTTATTCTCTT 57.939 33.333 0.00 0.00 0.00 2.85
157 158 9.061435 AGTGAAGTCCTTTTTCTTATTCTCTTG 57.939 33.333 0.00 0.00 0.00 3.02
158 159 9.057089 GTGAAGTCCTTTTTCTTATTCTCTTGA 57.943 33.333 0.00 0.00 0.00 3.02
159 160 9.627123 TGAAGTCCTTTTTCTTATTCTCTTGAA 57.373 29.630 0.00 0.00 36.54 2.69
171 172 9.706691 TCTTATTCTCTTGAATACAAACGAACT 57.293 29.630 0.00 0.00 42.75 3.01
172 173 9.959775 CTTATTCTCTTGAATACAAACGAACTC 57.040 33.333 0.00 0.00 42.75 3.01
173 174 9.706691 TTATTCTCTTGAATACAAACGAACTCT 57.293 29.630 0.00 0.00 42.75 3.24
175 176 8.516811 TTCTCTTGAATACAAACGAACTCTAC 57.483 34.615 0.00 0.00 35.49 2.59
176 177 7.088905 TCTCTTGAATACAAACGAACTCTACC 58.911 38.462 0.00 0.00 35.49 3.18
177 178 6.989659 TCTTGAATACAAACGAACTCTACCT 58.010 36.000 0.00 0.00 35.49 3.08
178 179 7.439381 TCTTGAATACAAACGAACTCTACCTT 58.561 34.615 0.00 0.00 35.49 3.50
179 180 8.579006 TCTTGAATACAAACGAACTCTACCTTA 58.421 33.333 0.00 0.00 35.49 2.69
180 181 9.367444 CTTGAATACAAACGAACTCTACCTTAT 57.633 33.333 0.00 0.00 35.49 1.73
181 182 8.697846 TGAATACAAACGAACTCTACCTTATG 57.302 34.615 0.00 0.00 0.00 1.90
182 183 7.277098 TGAATACAAACGAACTCTACCTTATGC 59.723 37.037 0.00 0.00 0.00 3.14
183 184 5.148651 ACAAACGAACTCTACCTTATGCT 57.851 39.130 0.00 0.00 0.00 3.79
184 185 5.169295 ACAAACGAACTCTACCTTATGCTC 58.831 41.667 0.00 0.00 0.00 4.26
185 186 5.168569 CAAACGAACTCTACCTTATGCTCA 58.831 41.667 0.00 0.00 0.00 4.26
186 187 4.373348 ACGAACTCTACCTTATGCTCAC 57.627 45.455 0.00 0.00 0.00 3.51
187 188 3.762288 ACGAACTCTACCTTATGCTCACA 59.238 43.478 0.00 0.00 0.00 3.58
188 189 4.142359 ACGAACTCTACCTTATGCTCACAG 60.142 45.833 0.00 0.00 0.00 3.66
189 190 4.096532 CGAACTCTACCTTATGCTCACAGA 59.903 45.833 0.00 0.00 0.00 3.41
190 191 5.221145 CGAACTCTACCTTATGCTCACAGAT 60.221 44.000 0.00 0.00 0.00 2.90
191 192 5.528043 ACTCTACCTTATGCTCACAGATG 57.472 43.478 0.00 0.00 0.00 2.90
192 193 4.343526 ACTCTACCTTATGCTCACAGATGG 59.656 45.833 0.00 0.00 38.09 3.51
193 194 4.290093 TCTACCTTATGCTCACAGATGGT 58.710 43.478 4.08 4.08 44.89 3.55
194 195 4.716784 TCTACCTTATGCTCACAGATGGTT 59.283 41.667 3.96 0.00 41.37 3.67
195 196 4.307032 ACCTTATGCTCACAGATGGTTT 57.693 40.909 0.00 0.00 41.37 3.27
196 197 4.265073 ACCTTATGCTCACAGATGGTTTC 58.735 43.478 0.00 0.00 41.37 2.78
197 198 4.018960 ACCTTATGCTCACAGATGGTTTCT 60.019 41.667 0.00 0.00 41.37 2.52
198 199 4.946157 CCTTATGCTCACAGATGGTTTCTT 59.054 41.667 0.00 0.00 29.93 2.52
199 200 5.416952 CCTTATGCTCACAGATGGTTTCTTT 59.583 40.000 0.00 0.00 29.93 2.52
200 201 6.599244 CCTTATGCTCACAGATGGTTTCTTTA 59.401 38.462 0.00 0.00 29.93 1.85
201 202 7.121168 CCTTATGCTCACAGATGGTTTCTTTAA 59.879 37.037 0.00 0.00 29.93 1.52
202 203 5.947228 TGCTCACAGATGGTTTCTTTAAG 57.053 39.130 0.00 0.00 29.93 1.85
203 204 5.620206 TGCTCACAGATGGTTTCTTTAAGA 58.380 37.500 0.00 0.00 29.93 2.10
204 205 6.061441 TGCTCACAGATGGTTTCTTTAAGAA 58.939 36.000 2.94 2.94 29.93 2.52
205 206 6.545666 TGCTCACAGATGGTTTCTTTAAGAAA 59.454 34.615 15.24 15.24 41.51 2.52
328 329 1.434622 TACCGGCGTCTCGACTCATC 61.435 60.000 6.01 0.00 29.68 2.92
505 514 5.680408 GCAATGTGCACTTGGATATCACAAT 60.680 40.000 19.41 0.00 44.26 2.71
506 515 6.334989 CAATGTGCACTTGGATATCACAATT 58.665 36.000 19.41 1.34 40.46 2.32
507 516 7.482474 CAATGTGCACTTGGATATCACAATTA 58.518 34.615 19.41 0.00 40.46 1.40
508 517 7.643569 ATGTGCACTTGGATATCACAATTAA 57.356 32.000 19.41 0.00 40.46 1.40
719 749 1.895798 AGTCTGCCATCTGTTCTCGAA 59.104 47.619 0.00 0.00 0.00 3.71
750 781 0.672401 GGCACGGATTCGAGGACAAA 60.672 55.000 0.00 0.00 40.11 2.83
754 785 3.001330 GCACGGATTCGAGGACAAAATAG 59.999 47.826 0.00 0.00 40.11 1.73
758 789 6.700081 CACGGATTCGAGGACAAAATAGAATA 59.300 38.462 0.00 0.00 40.11 1.75
761 792 7.096023 CGGATTCGAGGACAAAATAGAATACAG 60.096 40.741 0.00 0.00 39.00 2.74
785 816 2.360600 CGCCCCGTTCCAATCCAA 60.361 61.111 0.00 0.00 0.00 3.53
787 818 1.319614 CGCCCCGTTCCAATCCAAAT 61.320 55.000 0.00 0.00 0.00 2.32
788 819 0.459899 GCCCCGTTCCAATCCAAATC 59.540 55.000 0.00 0.00 0.00 2.17
789 820 1.111277 CCCCGTTCCAATCCAAATCC 58.889 55.000 0.00 0.00 0.00 3.01
790 821 1.618345 CCCCGTTCCAATCCAAATCCA 60.618 52.381 0.00 0.00 0.00 3.41
791 822 1.476488 CCCGTTCCAATCCAAATCCAC 59.524 52.381 0.00 0.00 0.00 4.02
792 823 1.132262 CCGTTCCAATCCAAATCCACG 59.868 52.381 0.00 0.00 0.00 4.94
793 824 1.132262 CGTTCCAATCCAAATCCACGG 59.868 52.381 0.00 0.00 0.00 4.94
794 825 2.442413 GTTCCAATCCAAATCCACGGA 58.558 47.619 0.00 0.00 35.27 4.69
795 826 2.122783 TCCAATCCAAATCCACGGAC 57.877 50.000 0.00 0.00 33.05 4.79
796 827 1.633432 TCCAATCCAAATCCACGGACT 59.367 47.619 0.00 0.00 33.05 3.85
801 832 1.550524 TCCAAATCCACGGACTCTCTG 59.449 52.381 0.00 0.00 0.00 3.35
836 868 3.114643 TGGATGTCTCACCACCATCTA 57.885 47.619 0.00 0.00 36.18 1.98
839 871 4.474651 TGGATGTCTCACCACCATCTATTT 59.525 41.667 0.00 0.00 36.18 1.40
843 875 7.721399 GGATGTCTCACCACCATCTATTTTATT 59.279 37.037 0.00 0.00 36.18 1.40
846 1025 7.987458 TGTCTCACCACCATCTATTTTATTCTC 59.013 37.037 0.00 0.00 0.00 2.87
855 1034 6.483307 CCATCTATTTTATTCTCGTTCCTGCA 59.517 38.462 0.00 0.00 0.00 4.41
856 1035 7.307632 CCATCTATTTTATTCTCGTTCCTGCAG 60.308 40.741 6.78 6.78 0.00 4.41
857 1036 4.622701 ATTTTATTCTCGTTCCTGCAGC 57.377 40.909 8.66 0.00 0.00 5.25
862 1041 3.898627 CTCGTTCCTGCAGCGACGT 62.899 63.158 27.78 0.00 36.89 4.34
918 1098 2.535984 CTCGCCTATAAGAAGCAACGTG 59.464 50.000 0.00 0.00 0.00 4.49
1131 1318 1.738099 CCAAGAGTCCAAGGCGTCG 60.738 63.158 0.00 0.00 0.00 5.12
1161 1348 1.523154 GCTTGCCGATTGTGGGAACA 61.523 55.000 0.00 0.00 34.06 3.18
1191 1378 1.065998 GGCACCAGTACCATTAACGGA 60.066 52.381 0.00 0.00 0.00 4.69
1237 1424 2.954318 CCAGTTCACCCATGATCATTCC 59.046 50.000 5.16 0.00 33.85 3.01
1242 1429 2.620112 CCCATGATCATTCCGGCGC 61.620 63.158 5.16 0.00 0.00 6.53
1246 1433 3.654020 GATCATTCCGGCGCTGGC 61.654 66.667 31.15 11.66 38.90 4.85
1275 1468 3.123620 CTGAAGCTCGGCCTGTGC 61.124 66.667 0.00 7.36 37.35 4.57
1292 1485 4.762251 CCTGTGCCTTTACTTTTCTAGCTT 59.238 41.667 0.00 0.00 0.00 3.74
1295 1492 6.292923 TGTGCCTTTACTTTTCTAGCTTACA 58.707 36.000 0.00 0.00 0.00 2.41
1298 1495 5.938710 GCCTTTACTTTTCTAGCTTACACCT 59.061 40.000 0.00 0.00 0.00 4.00
1303 1500 5.542779 ACTTTTCTAGCTTACACCTCACAG 58.457 41.667 0.00 0.00 0.00 3.66
1306 1503 4.785511 TCTAGCTTACACCTCACAGAAC 57.214 45.455 0.00 0.00 0.00 3.01
1317 1514 1.063469 CTCACAGAACAACGGCGTTTT 59.937 47.619 24.49 19.41 0.00 2.43
1319 1516 1.843753 CACAGAACAACGGCGTTTTTC 59.156 47.619 32.82 32.82 33.88 2.29
1321 1518 2.223180 ACAGAACAACGGCGTTTTTCTC 60.223 45.455 37.13 24.07 39.53 2.87
1324 1521 1.658994 ACAACGGCGTTTTTCTCTCA 58.341 45.000 24.49 0.00 0.00 3.27
1325 1522 1.329599 ACAACGGCGTTTTTCTCTCAC 59.670 47.619 24.49 0.00 0.00 3.51
1326 1523 0.942252 AACGGCGTTTTTCTCTCACC 59.058 50.000 21.19 0.00 0.00 4.02
1327 1524 0.106149 ACGGCGTTTTTCTCTCACCT 59.894 50.000 6.77 0.00 0.00 4.00
1329 1526 1.157585 GGCGTTTTTCTCTCACCTCC 58.842 55.000 0.00 0.00 0.00 4.30
1330 1527 1.542547 GGCGTTTTTCTCTCACCTCCA 60.543 52.381 0.00 0.00 0.00 3.86
1331 1528 2.427506 GCGTTTTTCTCTCACCTCCAT 58.572 47.619 0.00 0.00 0.00 3.41
1332 1529 2.160417 GCGTTTTTCTCTCACCTCCATG 59.840 50.000 0.00 0.00 0.00 3.66
1333 1530 2.160417 CGTTTTTCTCTCACCTCCATGC 59.840 50.000 0.00 0.00 0.00 4.06
1335 1532 3.726557 TTTTCTCTCACCTCCATGCAT 57.273 42.857 0.00 0.00 0.00 3.96
1336 1533 4.842531 TTTTCTCTCACCTCCATGCATA 57.157 40.909 0.00 0.00 0.00 3.14
1337 1534 5.378230 TTTTCTCTCACCTCCATGCATAT 57.622 39.130 0.00 0.00 0.00 1.78
1339 1536 3.311990 TCTCTCACCTCCATGCATATGT 58.688 45.455 0.00 0.00 32.21 2.29
1340 1537 3.713248 TCTCTCACCTCCATGCATATGTT 59.287 43.478 0.00 0.00 32.21 2.71
1341 1538 4.063689 CTCTCACCTCCATGCATATGTTC 58.936 47.826 0.00 0.00 32.21 3.18
1342 1539 2.804527 CTCACCTCCATGCATATGTTCG 59.195 50.000 0.00 0.00 32.21 3.95
1344 1541 2.945008 CACCTCCATGCATATGTTCGTT 59.055 45.455 0.00 0.00 32.21 3.85
1345 1542 4.126437 CACCTCCATGCATATGTTCGTTA 58.874 43.478 0.00 0.00 32.21 3.18
1349 1567 7.119699 CACCTCCATGCATATGTTCGTTATAAT 59.880 37.037 0.00 0.00 32.21 1.28
1358 1576 7.841277 GCATATGTTCGTTATAATGAGCGTATG 59.159 37.037 33.35 33.35 46.59 2.39
1365 1583 8.443898 TCGTTATAATGAGCGTATGTATCAAC 57.556 34.615 3.14 0.00 0.00 3.18
1372 1590 5.928153 TGAGCGTATGTATCAACTATCTCG 58.072 41.667 0.00 0.00 0.00 4.04
1377 1595 5.784139 CGTATGTATCAACTATCTCGTCGTG 59.216 44.000 0.00 0.00 0.00 4.35
1393 1611 8.692110 TCTCGTCGTGTGTATGTATTTATTTT 57.308 30.769 0.00 0.00 0.00 1.82
1406 1624 8.638685 ATGTATTTATTTTCAGTTCATGCTGC 57.361 30.769 0.00 0.00 36.49 5.25
1407 1625 6.746822 TGTATTTATTTTCAGTTCATGCTGCG 59.253 34.615 0.00 0.00 36.49 5.18
1439 1657 4.032900 CGTTCCTTGATGTGCTACATGTAC 59.967 45.833 0.08 0.00 39.27 2.90
1442 1660 4.164030 TCCTTGATGTGCTACATGTACCAT 59.836 41.667 0.08 4.70 39.27 3.55
1445 1663 3.627123 TGATGTGCTACATGTACCATTGC 59.373 43.478 0.08 4.28 39.27 3.56
1446 1664 3.064900 TGTGCTACATGTACCATTGCA 57.935 42.857 11.49 11.49 0.00 4.08
1447 1665 3.416156 TGTGCTACATGTACCATTGCAA 58.584 40.909 15.80 0.00 0.00 4.08
1448 1666 3.823304 TGTGCTACATGTACCATTGCAAA 59.177 39.130 15.80 9.81 0.00 3.68
1449 1667 4.462132 TGTGCTACATGTACCATTGCAAAT 59.538 37.500 15.80 0.00 0.00 2.32
1450 1668 5.047448 TGTGCTACATGTACCATTGCAAATT 60.047 36.000 15.80 0.00 0.00 1.82
1452 1670 6.034898 GTGCTACATGTACCATTGCAAATTTC 59.965 38.462 15.80 3.13 0.00 2.17
1454 1672 6.589523 GCTACATGTACCATTGCAAATTTCAA 59.410 34.615 1.71 5.81 0.00 2.69
1457 1675 8.477984 ACATGTACCATTGCAAATTTCAATAC 57.522 30.769 1.71 0.72 33.27 1.89
1458 1676 8.313292 ACATGTACCATTGCAAATTTCAATACT 58.687 29.630 1.71 6.46 33.27 2.12
1461 1679 9.632807 TGTACCATTGCAAATTTCAATACTTAC 57.367 29.630 1.71 12.92 33.27 2.34
1462 1680 9.083080 GTACCATTGCAAATTTCAATACTTACC 57.917 33.333 1.71 1.63 33.27 2.85
1463 1681 6.811170 ACCATTGCAAATTTCAATACTTACCG 59.189 34.615 1.71 3.47 33.27 4.02
1464 1682 6.811170 CCATTGCAAATTTCAATACTTACCGT 59.189 34.615 1.71 0.00 33.27 4.83
1465 1683 7.201427 CCATTGCAAATTTCAATACTTACCGTG 60.201 37.037 1.71 0.00 33.27 4.94
1466 1684 5.157781 TGCAAATTTCAATACTTACCGTGC 58.842 37.500 0.00 0.00 0.00 5.34
1467 1685 5.157781 GCAAATTTCAATACTTACCGTGCA 58.842 37.500 0.00 0.00 0.00 4.57
1468 1686 5.060446 GCAAATTTCAATACTTACCGTGCAC 59.940 40.000 6.82 6.82 0.00 4.57
1469 1687 4.593597 ATTTCAATACTTACCGTGCACG 57.406 40.909 31.77 31.77 39.44 5.34
1480 1698 2.369870 CGTGCACGGGATGTTCTAC 58.630 57.895 31.15 0.00 35.37 2.59
1481 1699 0.389296 CGTGCACGGGATGTTCTACA 60.389 55.000 31.15 0.00 35.37 2.74
1482 1700 1.739035 CGTGCACGGGATGTTCTACAT 60.739 52.381 31.15 0.00 37.32 2.29
1483 1701 1.665679 GTGCACGGGATGTTCTACATG 59.334 52.381 0.00 0.00 39.27 3.21
1484 1702 1.277842 TGCACGGGATGTTCTACATGT 59.722 47.619 2.69 2.69 39.27 3.21
1485 1703 2.498078 TGCACGGGATGTTCTACATGTA 59.502 45.455 5.25 5.25 39.27 2.29
1487 1705 3.741344 GCACGGGATGTTCTACATGTATC 59.259 47.826 5.91 1.37 39.27 2.24
1488 1706 4.739436 GCACGGGATGTTCTACATGTATCA 60.739 45.833 5.91 6.97 39.27 2.15
1489 1707 5.356426 CACGGGATGTTCTACATGTATCAA 58.644 41.667 5.91 0.00 39.27 2.57
1490 1708 5.991606 CACGGGATGTTCTACATGTATCAAT 59.008 40.000 5.91 0.00 39.27 2.57
1491 1709 6.483307 CACGGGATGTTCTACATGTATCAATT 59.517 38.462 5.91 0.00 39.27 2.32
1493 1711 8.375506 ACGGGATGTTCTACATGTATCAATTAT 58.624 33.333 5.91 2.50 39.27 1.28
1494 1712 9.869757 CGGGATGTTCTACATGTATCAATTATA 57.130 33.333 5.91 0.00 39.27 0.98
1524 1746 4.858850 ACATGTTATTTGGATCCAGCAGA 58.141 39.130 15.53 0.00 0.00 4.26
1527 1749 4.922206 TGTTATTTGGATCCAGCAGAAGT 58.078 39.130 15.53 0.00 0.00 3.01
1547 1769 7.973388 CAGAAGTGTGTCCAAATTTACTTTTCA 59.027 33.333 3.87 0.00 0.00 2.69
1559 1781 7.623268 AATTTACTTTTCAAATCGCAGTGTC 57.377 32.000 0.00 0.00 0.00 3.67
1562 1784 7.485418 TTACTTTTCAAATCGCAGTGTCTTA 57.515 32.000 0.00 0.00 0.00 2.10
1563 1785 5.748592 ACTTTTCAAATCGCAGTGTCTTAC 58.251 37.500 0.00 0.00 0.00 2.34
1564 1786 4.383774 TTTCAAATCGCAGTGTCTTACG 57.616 40.909 0.00 0.00 0.00 3.18
1581 1803 9.327529 GTGTCTTACGATTTATCTATTCGTAGG 57.672 37.037 7.30 7.30 45.67 3.18
1594 1816 2.230940 CGTAGGATGCGTCTTGGCG 61.231 63.158 5.77 4.34 40.12 5.69
1606 1828 2.724839 CGTCTTGGCGCTGTTTATGAAC 60.725 50.000 7.64 0.00 36.29 3.18
1624 1846 8.589335 TTATGAACTCTAAAGTGTTGTGAGTC 57.411 34.615 2.38 0.00 37.05 3.36
1629 1851 1.949465 AAAGTGTTGTGAGTCGTCCC 58.051 50.000 0.00 0.00 0.00 4.46
1630 1852 0.828022 AAGTGTTGTGAGTCGTCCCA 59.172 50.000 0.00 0.00 0.00 4.37
1639 1861 1.156736 GAGTCGTCCCACACATTTGG 58.843 55.000 0.00 0.00 36.26 3.28
1640 1862 0.762418 AGTCGTCCCACACATTTGGA 59.238 50.000 0.00 0.00 39.24 3.53
1655 1877 3.402628 TTTGGAGTTGGTGTAGAGCTC 57.597 47.619 5.27 5.27 0.00 4.09
1657 1879 0.173708 GGAGTTGGTGTAGAGCTCCG 59.826 60.000 10.93 0.00 36.74 4.63
1658 1880 0.173708 GAGTTGGTGTAGAGCTCCGG 59.826 60.000 10.93 0.00 33.61 5.14
1662 1884 1.568504 TGGTGTAGAGCTCCGGAATT 58.431 50.000 10.93 0.00 33.61 2.17
1665 1887 2.354805 GGTGTAGAGCTCCGGAATTTGT 60.355 50.000 10.93 0.00 0.00 2.83
1721 1946 4.724074 AGTGGGCATGATTGTATTGTTG 57.276 40.909 0.00 0.00 0.00 3.33
1755 1980 9.294030 GTCAAATCCACAAGAATATAGCAAAAG 57.706 33.333 0.00 0.00 0.00 2.27
1775 2000 9.213819 GCAAAAGACAAGAATCAAAAACAATTC 57.786 29.630 0.00 0.00 33.06 2.17
1783 2008 8.379161 CAAGAATCAAAAACAATTCAACGAACA 58.621 29.630 0.00 0.00 34.91 3.18
1807 2056 7.779798 ACAAGGATTTGCATATACCTGTGTAAT 59.220 33.333 3.09 0.00 37.85 1.89
1811 2060 9.248291 GGATTTGCATATACCTGTGTAATTTTG 57.752 33.333 0.00 0.00 0.00 2.44
1831 2080 7.724305 TTTTGTGTTTACTCACATCTACTCC 57.276 36.000 0.47 0.00 45.73 3.85
1832 2081 5.401531 TGTGTTTACTCACATCTACTCCC 57.598 43.478 0.00 0.00 42.36 4.30
1833 2082 5.084519 TGTGTTTACTCACATCTACTCCCT 58.915 41.667 0.00 0.00 42.36 4.20
1834 2083 5.185249 TGTGTTTACTCACATCTACTCCCTC 59.815 44.000 0.00 0.00 42.36 4.30
1835 2084 4.710375 TGTTTACTCACATCTACTCCCTCC 59.290 45.833 0.00 0.00 0.00 4.30
1836 2085 2.060050 ACTCACATCTACTCCCTCCG 57.940 55.000 0.00 0.00 0.00 4.63
1837 2086 1.285373 ACTCACATCTACTCCCTCCGT 59.715 52.381 0.00 0.00 0.00 4.69
1838 2087 2.291670 ACTCACATCTACTCCCTCCGTT 60.292 50.000 0.00 0.00 0.00 4.44
1839 2088 3.053842 ACTCACATCTACTCCCTCCGTTA 60.054 47.826 0.00 0.00 0.00 3.18
1840 2089 3.285484 TCACATCTACTCCCTCCGTTAC 58.715 50.000 0.00 0.00 0.00 2.50
1841 2090 3.053842 TCACATCTACTCCCTCCGTTACT 60.054 47.826 0.00 0.00 0.00 2.24
1842 2091 4.164796 TCACATCTACTCCCTCCGTTACTA 59.835 45.833 0.00 0.00 0.00 1.82
1843 2092 4.885907 CACATCTACTCCCTCCGTTACTAA 59.114 45.833 0.00 0.00 0.00 2.24
1844 2093 5.359009 CACATCTACTCCCTCCGTTACTAAA 59.641 44.000 0.00 0.00 0.00 1.85
1845 2094 6.040616 CACATCTACTCCCTCCGTTACTAAAT 59.959 42.308 0.00 0.00 0.00 1.40
1846 2095 7.230108 CACATCTACTCCCTCCGTTACTAAATA 59.770 40.741 0.00 0.00 0.00 1.40
1847 2096 7.949006 ACATCTACTCCCTCCGTTACTAAATAT 59.051 37.037 0.00 0.00 0.00 1.28
1848 2097 8.804204 CATCTACTCCCTCCGTTACTAAATATT 58.196 37.037 0.00 0.00 0.00 1.28
1849 2098 8.773033 TCTACTCCCTCCGTTACTAAATATTT 57.227 34.615 5.89 5.89 0.00 1.40
1850 2099 8.636213 TCTACTCCCTCCGTTACTAAATATTTG 58.364 37.037 11.05 3.88 0.00 2.32
1851 2100 7.191593 ACTCCCTCCGTTACTAAATATTTGT 57.808 36.000 11.05 9.18 0.00 2.83
1852 2101 7.270779 ACTCCCTCCGTTACTAAATATTTGTC 58.729 38.462 11.05 0.00 0.00 3.18
1853 2102 7.125356 ACTCCCTCCGTTACTAAATATTTGTCT 59.875 37.037 11.05 0.00 0.00 3.41
1854 2103 7.854337 TCCCTCCGTTACTAAATATTTGTCTT 58.146 34.615 11.05 0.00 0.00 3.01
1855 2104 8.323567 TCCCTCCGTTACTAAATATTTGTCTTT 58.676 33.333 11.05 0.00 0.00 2.52
1856 2105 8.953313 CCCTCCGTTACTAAATATTTGTCTTTT 58.047 33.333 11.05 0.00 0.00 2.27
1857 2106 9.983804 CCTCCGTTACTAAATATTTGTCTTTTC 57.016 33.333 11.05 0.00 0.00 2.29
1872 2121 8.876275 TTTGTCTTTTCAGAGATTTCAAATGG 57.124 30.769 0.00 0.00 0.00 3.16
1873 2122 7.822161 TGTCTTTTCAGAGATTTCAAATGGA 57.178 32.000 0.00 0.00 0.00 3.41
1874 2123 7.651808 TGTCTTTTCAGAGATTTCAAATGGAC 58.348 34.615 0.00 0.00 0.00 4.02
1875 2124 7.503566 TGTCTTTTCAGAGATTTCAAATGGACT 59.496 33.333 0.00 0.00 0.00 3.85
1876 2125 9.003658 GTCTTTTCAGAGATTTCAAATGGACTA 57.996 33.333 0.00 0.00 0.00 2.59
1877 2126 9.003658 TCTTTTCAGAGATTTCAAATGGACTAC 57.996 33.333 0.00 0.00 0.00 2.73
1878 2127 7.687941 TTTCAGAGATTTCAAATGGACTACC 57.312 36.000 0.00 0.00 0.00 3.18
1896 2145 9.788889 TGGACTACCACATACGGATATATATAG 57.211 37.037 0.00 0.00 41.77 1.31
1931 2180 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
1932 2181 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
1933 2182 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
1934 2183 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
1935 2184 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
1936 2185 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
1937 2186 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
1938 2187 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
1939 2188 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
1940 2189 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
1941 2190 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
1942 2191 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
1943 2192 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
1944 2193 5.670485 TCATTTTGCTCCGTATGTAGTCAT 58.330 37.500 0.00 0.00 38.00 3.06
1945 2194 6.112734 TCATTTTGCTCCGTATGTAGTCATT 58.887 36.000 0.00 0.00 35.70 2.57
1946 2195 6.597672 TCATTTTGCTCCGTATGTAGTCATTT 59.402 34.615 0.00 0.00 35.70 2.32
1947 2196 5.794687 TTTGCTCCGTATGTAGTCATTTG 57.205 39.130 0.00 0.00 35.70 2.32
1948 2197 4.465632 TGCTCCGTATGTAGTCATTTGT 57.534 40.909 0.00 0.00 35.70 2.83
1949 2198 4.827692 TGCTCCGTATGTAGTCATTTGTT 58.172 39.130 0.00 0.00 35.70 2.83
1950 2199 4.629634 TGCTCCGTATGTAGTCATTTGTTG 59.370 41.667 0.00 0.00 35.70 3.33
1951 2200 4.868171 GCTCCGTATGTAGTCATTTGTTGA 59.132 41.667 0.00 0.00 35.70 3.18
1952 2201 5.350365 GCTCCGTATGTAGTCATTTGTTGAA 59.650 40.000 0.00 0.00 35.70 2.69
1953 2202 6.128391 GCTCCGTATGTAGTCATTTGTTGAAA 60.128 38.462 0.00 0.00 35.70 2.69
1954 2203 7.414098 GCTCCGTATGTAGTCATTTGTTGAAAT 60.414 37.037 0.00 0.00 35.70 2.17
1955 2204 7.970384 TCCGTATGTAGTCATTTGTTGAAATC 58.030 34.615 0.00 0.00 35.70 2.17
1956 2205 7.822334 TCCGTATGTAGTCATTTGTTGAAATCT 59.178 33.333 0.00 0.00 35.70 2.40
1957 2206 8.116753 CCGTATGTAGTCATTTGTTGAAATCTC 58.883 37.037 0.00 0.00 35.70 2.75
1958 2207 8.873830 CGTATGTAGTCATTTGTTGAAATCTCT 58.126 33.333 0.00 0.00 35.70 3.10
1962 2211 9.996554 TGTAGTCATTTGTTGAAATCTCTAGAA 57.003 29.630 0.00 0.00 35.70 2.10
1965 2214 9.784531 AGTCATTTGTTGAAATCTCTAGAAAGA 57.215 29.630 0.00 0.00 35.70 2.52
1966 2215 9.818796 GTCATTTGTTGAAATCTCTAGAAAGAC 57.181 33.333 0.00 0.00 35.70 3.01
1967 2216 9.559732 TCATTTGTTGAAATCTCTAGAAAGACA 57.440 29.630 0.00 0.00 28.65 3.41
1982 2231 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
1983 2232 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
1984 2233 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
1985 2234 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
1986 2235 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
1987 2236 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
1988 2237 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
1989 2238 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
1990 2239 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
1991 2240 6.667558 AATATTTAGGAACGGAGGGAGTAG 57.332 41.667 0.00 0.00 0.00 2.57
1992 2241 3.463048 TTTAGGAACGGAGGGAGTAGT 57.537 47.619 0.00 0.00 0.00 2.73
1993 2242 4.591321 TTTAGGAACGGAGGGAGTAGTA 57.409 45.455 0.00 0.00 0.00 1.82
1994 2243 4.803329 TTAGGAACGGAGGGAGTAGTAT 57.197 45.455 0.00 0.00 0.00 2.12
1995 2244 5.912149 TTAGGAACGGAGGGAGTAGTATA 57.088 43.478 0.00 0.00 0.00 1.47
1996 2245 4.370094 AGGAACGGAGGGAGTAGTATAG 57.630 50.000 0.00 0.00 0.00 1.31
2003 2252 4.756135 CGGAGGGAGTAGTATAGAGACAAC 59.244 50.000 0.00 0.00 0.00 3.32
2015 2264 7.727181 AGTATAGAGACAACCATACATCCAAC 58.273 38.462 0.00 0.00 0.00 3.77
2026 2275 4.036027 CCATACATCCAACAATCAGCTCAC 59.964 45.833 0.00 0.00 0.00 3.51
2038 2287 6.064717 ACAATCAGCTCACCTTTCTTTTACT 58.935 36.000 0.00 0.00 0.00 2.24
2040 2289 7.389053 ACAATCAGCTCACCTTTCTTTTACTAG 59.611 37.037 0.00 0.00 0.00 2.57
2046 2513 8.207545 AGCTCACCTTTCTTTTACTAGATATGG 58.792 37.037 0.00 0.00 0.00 2.74
2078 2545 1.402984 GCATCTAGGGTTCTATCCGCG 60.403 57.143 0.00 0.00 0.00 6.46
2079 2546 0.889306 ATCTAGGGTTCTATCCGCGC 59.111 55.000 0.00 0.00 0.00 6.86
2081 2548 1.152610 TAGGGTTCTATCCGCGCCT 60.153 57.895 0.00 0.97 0.00 5.52
2083 2550 2.499827 GGGTTCTATCCGCGCCTCT 61.500 63.158 0.00 0.00 0.00 3.69
2087 2554 3.916544 CTATCCGCGCCTCTGCCA 61.917 66.667 0.00 0.00 0.00 4.92
2113 2580 1.608717 CCTCCTCTCCTGTTCGGTGG 61.609 65.000 0.00 0.00 0.00 4.61
2142 2609 2.743928 GCCAGAGAAGTGGGCACG 60.744 66.667 0.00 0.00 46.92 5.34
2147 2614 1.115930 AGAGAAGTGGGCACGTGTCT 61.116 55.000 21.13 11.98 38.26 3.41
2156 2623 0.790814 GGCACGTGTCTCTTTGTAGC 59.209 55.000 18.38 0.00 0.00 3.58
2185 2652 1.704641 AGCAGTTCCTTGTTTTCCCC 58.295 50.000 0.00 0.00 0.00 4.81
2187 2654 2.039418 GCAGTTCCTTGTTTTCCCCTT 58.961 47.619 0.00 0.00 0.00 3.95
2189 2656 2.365293 CAGTTCCTTGTTTTCCCCTTGG 59.635 50.000 0.00 0.00 0.00 3.61
2213 2680 1.915489 TGGTTCCATAGTGGCATCTGT 59.085 47.619 0.00 0.00 37.47 3.41
2224 2691 3.301352 GCATCTGTTGCGTGACATG 57.699 52.632 0.00 0.00 42.54 3.21
2225 2692 0.518636 GCATCTGTTGCGTGACATGT 59.481 50.000 0.00 0.00 42.54 3.21
2226 2693 1.069022 GCATCTGTTGCGTGACATGTT 60.069 47.619 0.00 0.00 42.54 2.71
2227 2694 2.577450 CATCTGTTGCGTGACATGTTG 58.423 47.619 0.00 0.00 0.00 3.33
2228 2695 0.943673 TCTGTTGCGTGACATGTTGG 59.056 50.000 0.00 0.00 0.00 3.77
2229 2696 0.661187 CTGTTGCGTGACATGTTGGC 60.661 55.000 0.00 4.75 0.00 4.52
2230 2697 1.725625 GTTGCGTGACATGTTGGCG 60.726 57.895 0.00 6.54 0.00 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.008712 TCGATGTGAATACCTGTGTAGCTAG 59.991 44.000 0.00 0.00 0.00 3.42
3 4 4.041740 TCGATGTGAATACCTGTGTAGC 57.958 45.455 0.00 0.00 0.00 3.58
4 5 8.642908 TTTATTCGATGTGAATACCTGTGTAG 57.357 34.615 0.00 0.00 46.61 2.74
5 6 9.256477 GATTTATTCGATGTGAATACCTGTGTA 57.744 33.333 0.00 0.00 46.61 2.90
6 7 7.987458 AGATTTATTCGATGTGAATACCTGTGT 59.013 33.333 0.00 0.00 46.61 3.72
7 8 8.370493 AGATTTATTCGATGTGAATACCTGTG 57.630 34.615 0.00 0.00 46.61 3.66
8 9 8.964476 AAGATTTATTCGATGTGAATACCTGT 57.036 30.769 0.00 0.00 46.61 4.00
9 10 8.499162 GGAAGATTTATTCGATGTGAATACCTG 58.501 37.037 0.00 0.00 46.61 4.00
10 11 7.661847 GGGAAGATTTATTCGATGTGAATACCT 59.338 37.037 0.00 0.00 46.61 3.08
11 12 7.661847 AGGGAAGATTTATTCGATGTGAATACC 59.338 37.037 0.00 0.00 46.61 2.73
12 13 8.608844 AGGGAAGATTTATTCGATGTGAATAC 57.391 34.615 0.00 0.00 46.61 1.89
15 16 7.497909 GGTTAGGGAAGATTTATTCGATGTGAA 59.502 37.037 0.00 0.00 41.81 3.18
16 17 6.990349 GGTTAGGGAAGATTTATTCGATGTGA 59.010 38.462 0.00 0.00 0.00 3.58
17 18 6.204882 GGGTTAGGGAAGATTTATTCGATGTG 59.795 42.308 0.00 0.00 0.00 3.21
18 19 6.296803 GGGTTAGGGAAGATTTATTCGATGT 58.703 40.000 0.00 0.00 0.00 3.06
19 20 5.705905 GGGGTTAGGGAAGATTTATTCGATG 59.294 44.000 0.00 0.00 0.00 3.84
20 21 5.222068 GGGGGTTAGGGAAGATTTATTCGAT 60.222 44.000 0.00 0.00 0.00 3.59
21 22 4.103627 GGGGGTTAGGGAAGATTTATTCGA 59.896 45.833 0.00 0.00 0.00 3.71
22 23 4.141344 TGGGGGTTAGGGAAGATTTATTCG 60.141 45.833 0.00 0.00 0.00 3.34
23 24 5.397553 TGGGGGTTAGGGAAGATTTATTC 57.602 43.478 0.00 0.00 0.00 1.75
24 25 7.488889 TTATGGGGGTTAGGGAAGATTTATT 57.511 36.000 0.00 0.00 0.00 1.40
25 26 6.468798 GCTTATGGGGGTTAGGGAAGATTTAT 60.469 42.308 0.00 0.00 0.00 1.40
26 27 5.163023 GCTTATGGGGGTTAGGGAAGATTTA 60.163 44.000 0.00 0.00 0.00 1.40
27 28 4.387550 GCTTATGGGGGTTAGGGAAGATTT 60.388 45.833 0.00 0.00 0.00 2.17
28 29 3.140332 GCTTATGGGGGTTAGGGAAGATT 59.860 47.826 0.00 0.00 0.00 2.40
29 30 2.716969 GCTTATGGGGGTTAGGGAAGAT 59.283 50.000 0.00 0.00 0.00 2.40
30 31 2.132686 GCTTATGGGGGTTAGGGAAGA 58.867 52.381 0.00 0.00 0.00 2.87
31 32 1.850345 TGCTTATGGGGGTTAGGGAAG 59.150 52.381 0.00 0.00 0.00 3.46
32 33 1.988539 TGCTTATGGGGGTTAGGGAA 58.011 50.000 0.00 0.00 0.00 3.97
33 34 1.567175 GTTGCTTATGGGGGTTAGGGA 59.433 52.381 0.00 0.00 0.00 4.20
34 35 1.411074 GGTTGCTTATGGGGGTTAGGG 60.411 57.143 0.00 0.00 0.00 3.53
35 36 1.411074 GGGTTGCTTATGGGGGTTAGG 60.411 57.143 0.00 0.00 0.00 2.69
36 37 1.411074 GGGGTTGCTTATGGGGGTTAG 60.411 57.143 0.00 0.00 0.00 2.34
37 38 0.632294 GGGGTTGCTTATGGGGGTTA 59.368 55.000 0.00 0.00 0.00 2.85
38 39 1.390525 GGGGTTGCTTATGGGGGTT 59.609 57.895 0.00 0.00 0.00 4.11
39 40 2.632540 GGGGGTTGCTTATGGGGGT 61.633 63.158 0.00 0.00 0.00 4.95
40 41 2.282106 GGGGGTTGCTTATGGGGG 59.718 66.667 0.00 0.00 0.00 5.40
54 55 3.574074 CTGTGGGTGCTTCAGGGGG 62.574 68.421 0.00 0.00 0.00 5.40
55 56 2.034687 CTGTGGGTGCTTCAGGGG 59.965 66.667 0.00 0.00 0.00 4.79
56 57 2.674380 GCTGTGGGTGCTTCAGGG 60.674 66.667 0.00 0.00 0.00 4.45
57 58 1.970114 CAGCTGTGGGTGCTTCAGG 60.970 63.158 5.25 0.00 38.92 3.86
58 59 1.970114 CCAGCTGTGGGTGCTTCAG 60.970 63.158 13.81 0.00 40.67 3.02
59 60 2.113774 CCAGCTGTGGGTGCTTCA 59.886 61.111 13.81 0.00 40.67 3.02
60 61 1.529244 AACCAGCTGTGGGTGCTTC 60.529 57.895 13.81 0.00 44.83 3.86
61 62 2.603008 AACCAGCTGTGGGTGCTT 59.397 55.556 13.81 0.00 44.83 3.91
73 74 6.442682 ACATTTATATGGCTCTGGCAACCAG 61.443 44.000 7.33 7.33 43.11 4.00
74 75 3.660970 TTTATATGGCTCTGGCAACCA 57.339 42.857 6.07 6.07 42.43 3.67
75 76 3.891366 ACATTTATATGGCTCTGGCAACC 59.109 43.478 0.00 0.00 42.43 3.77
76 77 6.633500 TTACATTTATATGGCTCTGGCAAC 57.367 37.500 0.00 0.00 42.43 4.17
77 78 7.652524 TTTTACATTTATATGGCTCTGGCAA 57.347 32.000 0.00 0.00 42.43 4.52
78 79 7.838079 ATTTTACATTTATATGGCTCTGGCA 57.162 32.000 0.00 0.00 43.52 4.92
79 80 9.626045 GTAATTTTACATTTATATGGCTCTGGC 57.374 33.333 0.00 0.00 36.01 4.85
92 93 7.977293 GCGGGAATTAGTGGTAATTTTACATTT 59.023 33.333 3.12 0.00 38.70 2.32
93 94 7.417003 GGCGGGAATTAGTGGTAATTTTACATT 60.417 37.037 3.12 0.00 38.70 2.71
94 95 6.040054 GGCGGGAATTAGTGGTAATTTTACAT 59.960 38.462 3.12 0.00 38.70 2.29
95 96 5.357596 GGCGGGAATTAGTGGTAATTTTACA 59.642 40.000 3.12 0.00 38.70 2.41
96 97 5.357596 TGGCGGGAATTAGTGGTAATTTTAC 59.642 40.000 0.00 0.00 38.70 2.01
97 98 5.507637 TGGCGGGAATTAGTGGTAATTTTA 58.492 37.500 0.00 0.00 38.70 1.52
98 99 4.345854 TGGCGGGAATTAGTGGTAATTTT 58.654 39.130 0.00 0.00 38.70 1.82
99 100 3.970842 TGGCGGGAATTAGTGGTAATTT 58.029 40.909 0.00 0.00 38.70 1.82
100 101 3.655615 TGGCGGGAATTAGTGGTAATT 57.344 42.857 0.00 0.00 40.85 1.40
101 102 3.284617 GTTGGCGGGAATTAGTGGTAAT 58.715 45.455 0.00 0.00 0.00 1.89
102 103 2.618559 GGTTGGCGGGAATTAGTGGTAA 60.619 50.000 0.00 0.00 0.00 2.85
103 104 1.065272 GGTTGGCGGGAATTAGTGGTA 60.065 52.381 0.00 0.00 0.00 3.25
104 105 0.323087 GGTTGGCGGGAATTAGTGGT 60.323 55.000 0.00 0.00 0.00 4.16
105 106 0.322997 TGGTTGGCGGGAATTAGTGG 60.323 55.000 0.00 0.00 0.00 4.00
106 107 1.405105 CATGGTTGGCGGGAATTAGTG 59.595 52.381 0.00 0.00 0.00 2.74
107 108 1.684869 CCATGGTTGGCGGGAATTAGT 60.685 52.381 2.57 0.00 35.85 2.24
108 109 1.032014 CCATGGTTGGCGGGAATTAG 58.968 55.000 2.57 0.00 35.85 1.73
109 110 0.626382 TCCATGGTTGGCGGGAATTA 59.374 50.000 12.58 0.00 43.29 1.40
110 111 0.032217 ATCCATGGTTGGCGGGAATT 60.032 50.000 12.58 0.00 43.29 2.17
111 112 0.468029 GATCCATGGTTGGCGGGAAT 60.468 55.000 12.58 0.00 43.29 3.01
112 113 1.077068 GATCCATGGTTGGCGGGAA 60.077 57.895 12.58 0.00 43.29 3.97
113 114 2.269520 CTGATCCATGGTTGGCGGGA 62.270 60.000 12.58 0.00 43.29 5.14
114 115 1.825191 CTGATCCATGGTTGGCGGG 60.825 63.158 12.58 0.00 43.29 6.13
115 116 1.077501 ACTGATCCATGGTTGGCGG 60.078 57.895 12.58 7.33 43.29 6.13
116 117 0.392863 TCACTGATCCATGGTTGGCG 60.393 55.000 12.58 0.58 43.29 5.69
117 118 1.747355 CTTCACTGATCCATGGTTGGC 59.253 52.381 12.58 0.34 43.29 4.52
118 119 3.012518 GACTTCACTGATCCATGGTTGG 58.987 50.000 12.58 3.58 45.15 3.77
119 120 3.012518 GGACTTCACTGATCCATGGTTG 58.987 50.000 12.58 3.22 32.35 3.77
120 121 2.915604 AGGACTTCACTGATCCATGGTT 59.084 45.455 12.58 2.52 34.73 3.67
121 122 2.555664 AGGACTTCACTGATCCATGGT 58.444 47.619 12.58 0.00 34.73 3.55
122 123 3.641434 AAGGACTTCACTGATCCATGG 57.359 47.619 4.97 4.97 34.73 3.66
123 124 5.709164 AGAAAAAGGACTTCACTGATCCATG 59.291 40.000 2.20 0.00 34.73 3.66
124 125 5.885465 AGAAAAAGGACTTCACTGATCCAT 58.115 37.500 2.20 0.00 34.73 3.41
125 126 5.310409 AGAAAAAGGACTTCACTGATCCA 57.690 39.130 2.20 0.00 34.73 3.41
126 127 7.929941 ATAAGAAAAAGGACTTCACTGATCC 57.070 36.000 0.00 0.00 0.00 3.36
127 128 9.225436 AGAATAAGAAAAAGGACTTCACTGATC 57.775 33.333 0.00 0.00 0.00 2.92
128 129 9.225436 GAGAATAAGAAAAAGGACTTCACTGAT 57.775 33.333 0.00 0.00 0.00 2.90
129 130 8.432805 AGAGAATAAGAAAAAGGACTTCACTGA 58.567 33.333 0.00 0.00 0.00 3.41
130 131 8.614469 AGAGAATAAGAAAAAGGACTTCACTG 57.386 34.615 0.00 0.00 0.00 3.66
131 132 9.061435 CAAGAGAATAAGAAAAAGGACTTCACT 57.939 33.333 0.00 0.00 0.00 3.41
132 133 9.057089 TCAAGAGAATAAGAAAAAGGACTTCAC 57.943 33.333 0.00 0.00 0.00 3.18
133 134 9.627123 TTCAAGAGAATAAGAAAAAGGACTTCA 57.373 29.630 0.00 0.00 0.00 3.02
145 146 9.706691 AGTTCGTTTGTATTCAAGAGAATAAGA 57.293 29.630 0.00 0.00 45.58 2.10
146 147 9.959775 GAGTTCGTTTGTATTCAAGAGAATAAG 57.040 33.333 0.00 0.00 45.58 1.73
147 148 9.706691 AGAGTTCGTTTGTATTCAAGAGAATAA 57.293 29.630 0.00 0.00 45.58 1.40
149 150 9.141400 GTAGAGTTCGTTTGTATTCAAGAGAAT 57.859 33.333 7.27 0.00 45.98 2.40
150 151 7.597743 GGTAGAGTTCGTTTGTATTCAAGAGAA 59.402 37.037 1.98 1.98 38.31 2.87
151 152 7.039923 AGGTAGAGTTCGTTTGTATTCAAGAGA 60.040 37.037 0.00 0.00 34.88 3.10
152 153 7.091443 AGGTAGAGTTCGTTTGTATTCAAGAG 58.909 38.462 0.00 0.00 34.88 2.85
153 154 6.989659 AGGTAGAGTTCGTTTGTATTCAAGA 58.010 36.000 0.00 0.00 34.88 3.02
154 155 7.653767 AAGGTAGAGTTCGTTTGTATTCAAG 57.346 36.000 0.00 0.00 34.88 3.02
155 156 9.146984 CATAAGGTAGAGTTCGTTTGTATTCAA 57.853 33.333 0.00 0.00 0.00 2.69
156 157 7.277098 GCATAAGGTAGAGTTCGTTTGTATTCA 59.723 37.037 0.00 0.00 0.00 2.57
157 158 7.491696 AGCATAAGGTAGAGTTCGTTTGTATTC 59.508 37.037 0.00 0.00 0.00 1.75
158 159 7.328737 AGCATAAGGTAGAGTTCGTTTGTATT 58.671 34.615 0.00 0.00 0.00 1.89
159 160 6.875076 AGCATAAGGTAGAGTTCGTTTGTAT 58.125 36.000 0.00 0.00 0.00 2.29
160 161 6.071784 TGAGCATAAGGTAGAGTTCGTTTGTA 60.072 38.462 0.00 0.00 0.00 2.41
161 162 5.148651 AGCATAAGGTAGAGTTCGTTTGT 57.851 39.130 0.00 0.00 0.00 2.83
162 163 5.062308 GTGAGCATAAGGTAGAGTTCGTTTG 59.938 44.000 0.00 0.00 0.00 2.93
163 164 5.169295 GTGAGCATAAGGTAGAGTTCGTTT 58.831 41.667 0.00 0.00 0.00 3.60
164 165 4.219944 TGTGAGCATAAGGTAGAGTTCGTT 59.780 41.667 0.00 0.00 0.00 3.85
165 166 3.762288 TGTGAGCATAAGGTAGAGTTCGT 59.238 43.478 0.00 0.00 0.00 3.85
166 167 4.096532 TCTGTGAGCATAAGGTAGAGTTCG 59.903 45.833 0.00 0.00 0.00 3.95
167 168 5.584253 TCTGTGAGCATAAGGTAGAGTTC 57.416 43.478 0.00 0.00 0.00 3.01
168 169 5.163364 CCATCTGTGAGCATAAGGTAGAGTT 60.163 44.000 0.00 0.00 0.00 3.01
169 170 4.343526 CCATCTGTGAGCATAAGGTAGAGT 59.656 45.833 0.00 0.00 0.00 3.24
170 171 4.343526 ACCATCTGTGAGCATAAGGTAGAG 59.656 45.833 0.00 0.00 0.00 2.43
171 172 4.290093 ACCATCTGTGAGCATAAGGTAGA 58.710 43.478 0.00 0.00 0.00 2.59
172 173 4.679373 ACCATCTGTGAGCATAAGGTAG 57.321 45.455 0.00 0.00 0.00 3.18
173 174 5.189736 AGAAACCATCTGTGAGCATAAGGTA 59.810 40.000 0.00 0.00 36.88 3.08
174 175 4.018960 AGAAACCATCTGTGAGCATAAGGT 60.019 41.667 0.00 0.00 36.88 3.50
175 176 4.521146 AGAAACCATCTGTGAGCATAAGG 58.479 43.478 0.00 0.00 36.88 2.69
176 177 6.506500 AAAGAAACCATCTGTGAGCATAAG 57.493 37.500 0.00 0.00 38.79 1.73
177 178 7.882791 TCTTAAAGAAACCATCTGTGAGCATAA 59.117 33.333 0.00 0.00 38.79 1.90
178 179 7.394016 TCTTAAAGAAACCATCTGTGAGCATA 58.606 34.615 0.00 0.00 38.79 3.14
179 180 6.240894 TCTTAAAGAAACCATCTGTGAGCAT 58.759 36.000 0.00 0.00 38.79 3.79
180 181 5.620206 TCTTAAAGAAACCATCTGTGAGCA 58.380 37.500 0.00 0.00 38.79 4.26
181 182 6.560253 TTCTTAAAGAAACCATCTGTGAGC 57.440 37.500 0.00 0.00 38.79 4.26
248 249 0.433492 CAACGCCAGTAGAAACGTCG 59.567 55.000 0.00 0.00 37.87 5.12
505 514 5.253330 CCTTGGTTGCAGTAGGATCTTTAA 58.747 41.667 0.00 0.00 0.00 1.52
506 515 4.843728 CCTTGGTTGCAGTAGGATCTTTA 58.156 43.478 0.00 0.00 0.00 1.85
507 516 3.690460 CCTTGGTTGCAGTAGGATCTTT 58.310 45.455 0.00 0.00 0.00 2.52
508 517 2.619074 GCCTTGGTTGCAGTAGGATCTT 60.619 50.000 8.99 0.00 0.00 2.40
677 696 6.500041 ACTAGTTGCTGTCGAATTAGAGATC 58.500 40.000 0.00 0.00 0.00 2.75
742 772 7.604545 GGATAGGCTGTATTCTATTTTGTCCTC 59.395 40.741 0.00 0.00 0.00 3.71
750 781 3.197983 GGGCGGATAGGCTGTATTCTATT 59.802 47.826 0.00 0.00 45.89 1.73
754 785 0.036294 GGGGCGGATAGGCTGTATTC 60.036 60.000 0.00 0.00 45.89 1.75
761 792 4.620937 GGAACGGGGCGGATAGGC 62.621 72.222 0.00 0.00 45.91 3.93
785 816 0.616111 AGGCAGAGAGTCCGTGGATT 60.616 55.000 0.00 0.00 0.00 3.01
787 818 1.979155 CAGGCAGAGAGTCCGTGGA 60.979 63.158 0.00 0.00 0.00 4.02
788 819 2.575993 CAGGCAGAGAGTCCGTGG 59.424 66.667 0.00 0.00 0.00 4.94
789 820 2.125753 GCAGGCAGAGAGTCCGTG 60.126 66.667 0.00 0.00 0.00 4.94
790 821 3.386237 GGCAGGCAGAGAGTCCGT 61.386 66.667 0.00 0.00 0.00 4.69
791 822 4.154347 GGGCAGGCAGAGAGTCCG 62.154 72.222 0.00 0.00 0.00 4.79
792 823 4.154347 CGGGCAGGCAGAGAGTCC 62.154 72.222 0.00 0.00 0.00 3.85
793 824 3.386237 ACGGGCAGGCAGAGAGTC 61.386 66.667 0.00 0.00 0.00 3.36
794 825 3.699894 CACGGGCAGGCAGAGAGT 61.700 66.667 0.00 0.00 0.00 3.24
795 826 4.463879 CCACGGGCAGGCAGAGAG 62.464 72.222 0.00 0.00 0.00 3.20
813 844 3.876300 GTGGTGAGACATCCACGC 58.124 61.111 0.00 0.00 43.34 5.34
818 849 8.682936 AATAAAATAGATGGTGGTGAGACATC 57.317 34.615 0.00 0.00 40.90 3.06
836 868 3.063997 CGCTGCAGGAACGAGAATAAAAT 59.936 43.478 17.12 0.00 0.00 1.82
839 871 1.203758 TCGCTGCAGGAACGAGAATAA 59.796 47.619 17.12 0.00 0.00 1.40
843 875 2.258591 GTCGCTGCAGGAACGAGA 59.741 61.111 17.12 0.00 36.34 4.04
846 1025 3.470567 GACGTCGCTGCAGGAACG 61.471 66.667 17.12 17.05 0.00 3.95
885 1065 1.536073 TAGGCGAGCTGAGTTGCACT 61.536 55.000 0.00 0.00 34.99 4.40
918 1098 3.756434 TGAGCTTAGGTTTACCATTGTGC 59.244 43.478 1.13 0.00 38.89 4.57
921 1101 4.636206 GGAGTGAGCTTAGGTTTACCATTG 59.364 45.833 1.13 0.00 38.89 2.82
922 1102 4.288626 TGGAGTGAGCTTAGGTTTACCATT 59.711 41.667 1.13 0.00 38.89 3.16
1191 1378 2.224159 AGGAATGACCACCAGCGGT 61.224 57.895 0.00 0.00 43.91 5.68
1226 1413 1.572941 CAGCGCCGGAATGATCATG 59.427 57.895 9.46 0.00 0.00 3.07
1242 1429 0.887836 TCAGCTTGCTTGTCAGCCAG 60.888 55.000 0.00 0.00 46.74 4.85
1246 1433 3.769228 GCTTCAGCTTGCTTGTCAG 57.231 52.632 0.00 0.00 38.21 3.51
1268 1455 3.119814 GCTAGAAAAGTAAAGGCACAGGC 60.120 47.826 0.00 0.00 40.13 4.85
1270 1457 5.948992 AAGCTAGAAAAGTAAAGGCACAG 57.051 39.130 0.00 0.00 0.00 3.66
1292 1485 1.539496 GCCGTTGTTCTGTGAGGTGTA 60.539 52.381 0.00 0.00 0.00 2.90
1295 1492 1.594293 CGCCGTTGTTCTGTGAGGT 60.594 57.895 0.00 0.00 0.00 3.85
1298 1495 1.088306 AAAACGCCGTTGTTCTGTGA 58.912 45.000 1.95 0.00 0.00 3.58
1303 1500 2.031191 TGAGAGAAAAACGCCGTTGTTC 59.969 45.455 22.21 22.21 39.34 3.18
1306 1503 1.333791 GGTGAGAGAAAAACGCCGTTG 60.334 52.381 1.95 0.00 0.00 4.10
1317 1514 3.713248 ACATATGCATGGAGGTGAGAGAA 59.287 43.478 10.16 0.00 36.39 2.87
1319 1516 3.766068 ACATATGCATGGAGGTGAGAG 57.234 47.619 10.16 0.00 36.39 3.20
1321 1518 2.804527 CGAACATATGCATGGAGGTGAG 59.195 50.000 10.16 0.00 36.39 3.51
1324 1521 3.281727 AACGAACATATGCATGGAGGT 57.718 42.857 10.16 0.00 36.39 3.85
1325 1522 7.334171 TCATTATAACGAACATATGCATGGAGG 59.666 37.037 10.16 0.00 36.39 4.30
1326 1523 8.255394 TCATTATAACGAACATATGCATGGAG 57.745 34.615 10.16 1.13 36.39 3.86
1327 1524 7.148423 GCTCATTATAACGAACATATGCATGGA 60.148 37.037 10.16 0.00 36.39 3.41
1329 1526 6.679919 CGCTCATTATAACGAACATATGCATG 59.320 38.462 10.16 0.00 38.21 4.06
1330 1527 6.368791 ACGCTCATTATAACGAACATATGCAT 59.631 34.615 3.79 3.79 0.00 3.96
1331 1528 5.694458 ACGCTCATTATAACGAACATATGCA 59.306 36.000 1.58 0.00 0.00 3.96
1332 1529 6.153212 ACGCTCATTATAACGAACATATGC 57.847 37.500 1.58 0.00 0.00 3.14
1333 1530 8.860128 ACATACGCTCATTATAACGAACATATG 58.140 33.333 0.00 0.00 0.00 1.78
1336 1533 8.981724 ATACATACGCTCATTATAACGAACAT 57.018 30.769 0.00 0.00 0.00 2.71
1337 1534 8.077386 TGATACATACGCTCATTATAACGAACA 58.923 33.333 0.00 0.00 0.00 3.18
1339 1536 8.908678 GTTGATACATACGCTCATTATAACGAA 58.091 33.333 0.00 0.00 0.00 3.85
1340 1537 8.294577 AGTTGATACATACGCTCATTATAACGA 58.705 33.333 0.00 0.00 0.00 3.85
1341 1538 8.449085 AGTTGATACATACGCTCATTATAACG 57.551 34.615 0.00 0.00 0.00 3.18
1349 1567 5.469084 ACGAGATAGTTGATACATACGCTCA 59.531 40.000 0.00 0.00 0.00 4.26
1358 1576 4.906423 ACACACGACGAGATAGTTGATAC 58.094 43.478 0.00 0.00 0.00 2.24
1365 1583 9.608617 AATAAATACATACACACGACGAGATAG 57.391 33.333 0.00 0.00 0.00 2.08
1370 1588 8.463456 TGAAAATAAATACATACACACGACGA 57.537 30.769 0.00 0.00 0.00 4.20
1393 1611 1.066215 ACATACCGCAGCATGAACTGA 60.066 47.619 0.00 0.00 40.25 3.41
1407 1625 3.374058 CACATCAAGGAACGGAACATACC 59.626 47.826 0.00 0.00 0.00 2.73
1439 1657 6.811170 ACGGTAAGTATTGAAATTTGCAATGG 59.189 34.615 12.15 0.00 36.68 3.16
1442 1660 5.631512 GCACGGTAAGTATTGAAATTTGCAA 59.368 36.000 0.00 0.00 0.00 4.08
1445 1663 5.282778 CGTGCACGGTAAGTATTGAAATTTG 59.717 40.000 31.15 0.00 35.37 2.32
1446 1664 5.387279 CGTGCACGGTAAGTATTGAAATTT 58.613 37.500 31.15 0.00 35.37 1.82
1447 1665 4.965062 CGTGCACGGTAAGTATTGAAATT 58.035 39.130 31.15 0.00 35.37 1.82
1448 1666 4.593597 CGTGCACGGTAAGTATTGAAAT 57.406 40.909 31.15 0.00 35.37 2.17
1461 1679 4.929353 ATGTAGAACATCCCGTGCACGG 62.929 54.545 44.04 44.04 43.80 4.94
1462 1680 0.389296 TGTAGAACATCCCGTGCACG 60.389 55.000 31.77 31.77 39.44 5.34
1463 1681 1.665679 CATGTAGAACATCCCGTGCAC 59.334 52.381 6.82 6.82 36.53 4.57
1464 1682 1.277842 ACATGTAGAACATCCCGTGCA 59.722 47.619 0.00 0.00 36.53 4.57
1465 1683 2.024176 ACATGTAGAACATCCCGTGC 57.976 50.000 0.00 0.00 36.53 5.34
1466 1684 4.944048 TGATACATGTAGAACATCCCGTG 58.056 43.478 11.91 0.00 36.53 4.94
1467 1685 5.607939 TTGATACATGTAGAACATCCCGT 57.392 39.130 11.91 0.00 36.53 5.28
1468 1686 8.777865 ATAATTGATACATGTAGAACATCCCG 57.222 34.615 11.91 0.00 36.53 5.14
1494 1712 9.347240 CTGGATCCAAATAACATGTTCTTAGAT 57.653 33.333 15.85 15.92 0.00 1.98
1497 1715 6.889177 TGCTGGATCCAAATAACATGTTCTTA 59.111 34.615 15.85 0.00 0.00 2.10
1500 1718 5.357878 TCTGCTGGATCCAAATAACATGTTC 59.642 40.000 15.85 0.00 0.00 3.18
1501 1719 5.263599 TCTGCTGGATCCAAATAACATGTT 58.736 37.500 17.00 16.68 0.00 2.71
1503 1721 5.359009 ACTTCTGCTGGATCCAAATAACATG 59.641 40.000 17.00 2.23 0.00 3.21
1506 1724 4.702131 ACACTTCTGCTGGATCCAAATAAC 59.298 41.667 17.00 3.80 0.00 1.89
1507 1725 4.701651 CACACTTCTGCTGGATCCAAATAA 59.298 41.667 17.00 7.06 0.00 1.40
1510 1728 2.158623 ACACACTTCTGCTGGATCCAAA 60.159 45.455 17.00 6.15 0.00 3.28
1512 1730 1.002430 GACACACTTCTGCTGGATCCA 59.998 52.381 15.27 15.27 0.00 3.41
1513 1731 1.677217 GGACACACTTCTGCTGGATCC 60.677 57.143 4.20 4.20 0.00 3.36
1514 1732 1.002430 TGGACACACTTCTGCTGGATC 59.998 52.381 0.00 0.00 0.00 3.36
1515 1733 1.059098 TGGACACACTTCTGCTGGAT 58.941 50.000 0.00 0.00 0.00 3.41
1524 1746 9.665719 ATTTGAAAAGTAAATTTGGACACACTT 57.334 25.926 0.00 0.00 0.00 3.16
1527 1749 7.043059 GCGATTTGAAAAGTAAATTTGGACACA 60.043 33.333 0.00 0.00 0.00 3.72
1563 1785 6.028368 ACGCATCCTACGAATAGATAAATCG 58.972 40.000 0.00 0.00 42.05 3.34
1564 1786 7.251994 AGACGCATCCTACGAATAGATAAATC 58.748 38.462 0.00 0.00 0.00 2.17
1594 1816 7.587757 CACAACACTTTAGAGTTCATAAACAGC 59.412 37.037 0.00 0.00 37.88 4.40
1606 1828 3.982058 GGACGACTCACAACACTTTAGAG 59.018 47.826 0.00 0.00 0.00 2.43
1624 1846 1.266718 CAACTCCAAATGTGTGGGACG 59.733 52.381 0.00 0.00 39.34 4.79
1629 1851 4.133820 TCTACACCAACTCCAAATGTGTG 58.866 43.478 0.00 0.00 40.17 3.82
1630 1852 4.389374 CTCTACACCAACTCCAAATGTGT 58.611 43.478 0.00 0.00 42.38 3.72
1639 1861 0.173708 CCGGAGCTCTACACCAACTC 59.826 60.000 14.64 0.00 0.00 3.01
1640 1862 0.251653 TCCGGAGCTCTACACCAACT 60.252 55.000 14.64 0.00 0.00 3.16
1655 1877 1.666888 GCTTGAGCACACAAATTCCGG 60.667 52.381 0.00 0.00 41.59 5.14
1657 1879 3.671702 GCTAGCTTGAGCACACAAATTCC 60.672 47.826 7.70 0.00 45.16 3.01
1658 1880 3.496155 GCTAGCTTGAGCACACAAATTC 58.504 45.455 7.70 0.00 45.16 2.17
1755 1980 8.114359 TCGTTGAATTGTTTTTGATTCTTGTC 57.886 30.769 0.00 0.00 34.24 3.18
1763 1988 6.390721 TCCTTGTTCGTTGAATTGTTTTTGA 58.609 32.000 0.00 0.00 0.00 2.69
1775 2000 5.971202 GGTATATGCAAATCCTTGTTCGTTG 59.029 40.000 0.00 0.00 34.79 4.10
1783 2008 8.766994 AATTACACAGGTATATGCAAATCCTT 57.233 30.769 0.00 0.00 0.00 3.36
1811 2060 5.394333 GGAGGGAGTAGATGTGAGTAAACAC 60.394 48.000 0.00 0.00 40.68 3.32
1828 2077 7.498443 AGACAAATATTTAGTAACGGAGGGAG 58.502 38.462 0.00 0.00 0.00 4.30
1830 2079 8.502105 AAAGACAAATATTTAGTAACGGAGGG 57.498 34.615 0.00 0.00 0.00 4.30
1831 2080 9.983804 GAAAAGACAAATATTTAGTAACGGAGG 57.016 33.333 0.00 0.00 0.00 4.30
1846 2095 9.485206 CCATTTGAAATCTCTGAAAAGACAAAT 57.515 29.630 0.00 0.00 33.34 2.32
1847 2096 8.694540 TCCATTTGAAATCTCTGAAAAGACAAA 58.305 29.630 0.00 0.00 0.00 2.83
1848 2097 8.137437 GTCCATTTGAAATCTCTGAAAAGACAA 58.863 33.333 0.00 0.00 0.00 3.18
1849 2098 7.503566 AGTCCATTTGAAATCTCTGAAAAGACA 59.496 33.333 0.00 0.00 0.00 3.41
1850 2099 7.880105 AGTCCATTTGAAATCTCTGAAAAGAC 58.120 34.615 0.00 0.00 0.00 3.01
1851 2100 9.003658 GTAGTCCATTTGAAATCTCTGAAAAGA 57.996 33.333 0.00 0.00 0.00 2.52
1852 2101 8.239998 GGTAGTCCATTTGAAATCTCTGAAAAG 58.760 37.037 0.00 0.00 0.00 2.27
1853 2102 7.723616 TGGTAGTCCATTTGAAATCTCTGAAAA 59.276 33.333 0.00 0.00 39.03 2.29
1854 2103 7.174946 GTGGTAGTCCATTTGAAATCTCTGAAA 59.825 37.037 0.00 0.00 46.20 2.69
1855 2104 6.655003 GTGGTAGTCCATTTGAAATCTCTGAA 59.345 38.462 0.00 0.00 46.20 3.02
1856 2105 6.173339 GTGGTAGTCCATTTGAAATCTCTGA 58.827 40.000 0.00 0.00 46.20 3.27
1857 2106 5.939883 TGTGGTAGTCCATTTGAAATCTCTG 59.060 40.000 0.00 0.00 46.20 3.35
1858 2107 6.126863 TGTGGTAGTCCATTTGAAATCTCT 57.873 37.500 0.00 0.00 46.20 3.10
1859 2108 7.254455 CGTATGTGGTAGTCCATTTGAAATCTC 60.254 40.741 0.00 0.00 46.20 2.75
1860 2109 6.538742 CGTATGTGGTAGTCCATTTGAAATCT 59.461 38.462 0.00 0.00 46.20 2.40
1861 2110 6.238374 CCGTATGTGGTAGTCCATTTGAAATC 60.238 42.308 0.00 0.00 46.20 2.17
1862 2111 5.588648 CCGTATGTGGTAGTCCATTTGAAAT 59.411 40.000 0.00 0.00 46.20 2.17
1863 2112 4.938832 CCGTATGTGGTAGTCCATTTGAAA 59.061 41.667 0.00 0.00 46.20 2.69
1864 2113 4.223255 TCCGTATGTGGTAGTCCATTTGAA 59.777 41.667 0.00 0.00 46.20 2.69
1865 2114 3.770388 TCCGTATGTGGTAGTCCATTTGA 59.230 43.478 0.00 0.00 46.20 2.69
1866 2115 4.131649 TCCGTATGTGGTAGTCCATTTG 57.868 45.455 0.00 0.00 46.20 2.32
1867 2116 6.681729 ATATCCGTATGTGGTAGTCCATTT 57.318 37.500 0.00 0.00 46.20 2.32
1868 2117 7.973048 ATATATCCGTATGTGGTAGTCCATT 57.027 36.000 0.00 0.00 46.20 3.16
1870 2119 9.788889 CTATATATATCCGTATGTGGTAGTCCA 57.211 37.037 0.00 0.00 42.05 4.02
1909 2158 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
1910 2159 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
1911 2160 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
1912 2161 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
1913 2162 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
1914 2163 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
1915 2164 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
1916 2165 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
1917 2166 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
1918 2167 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
1919 2168 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
1920 2169 5.109210 TGACTACATACGGAGCAAAATGAG 58.891 41.667 0.00 0.00 0.00 2.90
1921 2170 5.079689 TGACTACATACGGAGCAAAATGA 57.920 39.130 0.00 0.00 0.00 2.57
1922 2171 5.991328 ATGACTACATACGGAGCAAAATG 57.009 39.130 0.00 0.00 34.71 2.32
1923 2172 6.374333 ACAAATGACTACATACGGAGCAAAAT 59.626 34.615 0.00 0.00 35.50 1.82
1924 2173 5.703592 ACAAATGACTACATACGGAGCAAAA 59.296 36.000 0.00 0.00 35.50 2.44
1925 2174 5.242434 ACAAATGACTACATACGGAGCAAA 58.758 37.500 0.00 0.00 35.50 3.68
1926 2175 4.827692 ACAAATGACTACATACGGAGCAA 58.172 39.130 0.00 0.00 35.50 3.91
1927 2176 4.465632 ACAAATGACTACATACGGAGCA 57.534 40.909 0.00 0.00 35.50 4.26
1928 2177 4.868171 TCAACAAATGACTACATACGGAGC 59.132 41.667 0.00 0.00 35.50 4.70
1929 2178 6.961359 TTCAACAAATGACTACATACGGAG 57.039 37.500 0.00 0.00 37.92 4.63
1930 2179 7.822334 AGATTTCAACAAATGACTACATACGGA 59.178 33.333 0.00 0.00 37.92 4.69
1931 2180 7.974675 AGATTTCAACAAATGACTACATACGG 58.025 34.615 0.00 0.00 37.92 4.02
1932 2181 8.873830 AGAGATTTCAACAAATGACTACATACG 58.126 33.333 0.00 0.00 37.92 3.06
1936 2185 9.996554 TTCTAGAGATTTCAACAAATGACTACA 57.003 29.630 0.00 0.00 37.92 2.74
1939 2188 9.784531 TCTTTCTAGAGATTTCAACAAATGACT 57.215 29.630 0.00 0.00 37.92 3.41
1940 2189 9.818796 GTCTTTCTAGAGATTTCAACAAATGAC 57.181 33.333 0.00 0.00 37.92 3.06
1941 2190 9.559732 TGTCTTTCTAGAGATTTCAACAAATGA 57.440 29.630 0.00 0.00 31.94 2.57
1956 2205 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
1957 2206 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
1958 2207 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
1959 2208 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
1960 2209 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
1961 2210 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
1962 2211 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
1963 2212 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
1964 2213 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
1965 2214 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
1966 2215 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
1967 2216 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
1968 2217 6.141790 ACTACTCCCTCCGTTCCTAAATATT 58.858 40.000 0.00 0.00 0.00 1.28
1969 2218 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
1970 2219 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
1971 2220 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
1972 2221 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
1973 2222 4.803329 ATACTACTCCCTCCGTTCCTAA 57.197 45.455 0.00 0.00 0.00 2.69
1974 2223 5.158141 TCTATACTACTCCCTCCGTTCCTA 58.842 45.833 0.00 0.00 0.00 2.94
1975 2224 3.979347 TCTATACTACTCCCTCCGTTCCT 59.021 47.826 0.00 0.00 0.00 3.36
1976 2225 4.041444 TCTCTATACTACTCCCTCCGTTCC 59.959 50.000 0.00 0.00 0.00 3.62
1977 2226 4.996758 GTCTCTATACTACTCCCTCCGTTC 59.003 50.000 0.00 0.00 0.00 3.95
1978 2227 4.411540 TGTCTCTATACTACTCCCTCCGTT 59.588 45.833 0.00 0.00 0.00 4.44
1979 2228 3.972638 TGTCTCTATACTACTCCCTCCGT 59.027 47.826 0.00 0.00 0.00 4.69
1980 2229 4.620589 TGTCTCTATACTACTCCCTCCG 57.379 50.000 0.00 0.00 0.00 4.63
1981 2230 5.072055 GGTTGTCTCTATACTACTCCCTCC 58.928 50.000 0.00 0.00 0.00 4.30
1982 2231 5.692928 TGGTTGTCTCTATACTACTCCCTC 58.307 45.833 0.00 0.00 0.00 4.30
1983 2232 5.728937 TGGTTGTCTCTATACTACTCCCT 57.271 43.478 0.00 0.00 0.00 4.20
1984 2233 7.002879 TGTATGGTTGTCTCTATACTACTCCC 58.997 42.308 0.00 0.00 0.00 4.30
1985 2234 8.638629 ATGTATGGTTGTCTCTATACTACTCC 57.361 38.462 0.00 0.00 0.00 3.85
1986 2235 8.732531 GGATGTATGGTTGTCTCTATACTACTC 58.267 40.741 0.00 0.00 0.00 2.59
1987 2236 8.225416 TGGATGTATGGTTGTCTCTATACTACT 58.775 37.037 0.00 0.00 0.00 2.57
1988 2237 8.405418 TGGATGTATGGTTGTCTCTATACTAC 57.595 38.462 0.00 0.00 0.00 2.73
1989 2238 8.857098 GTTGGATGTATGGTTGTCTCTATACTA 58.143 37.037 0.00 0.00 0.00 1.82
1990 2239 7.344612 TGTTGGATGTATGGTTGTCTCTATACT 59.655 37.037 0.00 0.00 0.00 2.12
1991 2240 7.497595 TGTTGGATGTATGGTTGTCTCTATAC 58.502 38.462 0.00 0.00 0.00 1.47
1992 2241 7.669089 TGTTGGATGTATGGTTGTCTCTATA 57.331 36.000 0.00 0.00 0.00 1.31
1993 2242 6.560003 TGTTGGATGTATGGTTGTCTCTAT 57.440 37.500 0.00 0.00 0.00 1.98
1994 2243 6.367374 TTGTTGGATGTATGGTTGTCTCTA 57.633 37.500 0.00 0.00 0.00 2.43
1995 2244 4.908601 TGTTGGATGTATGGTTGTCTCT 57.091 40.909 0.00 0.00 0.00 3.10
1996 2245 5.647658 TGATTGTTGGATGTATGGTTGTCTC 59.352 40.000 0.00 0.00 0.00 3.36
2003 2252 4.036027 GTGAGCTGATTGTTGGATGTATGG 59.964 45.833 0.00 0.00 0.00 2.74
2015 2264 6.566197 AGTAAAAGAAAGGTGAGCTGATTG 57.434 37.500 0.00 0.00 0.00 2.67
2026 2275 6.486993 GTGGGCCATATCTAGTAAAAGAAAGG 59.513 42.308 10.70 0.00 0.00 3.11
2038 2287 2.632996 GCACTAGTGTGGGCCATATCTA 59.367 50.000 23.44 11.80 43.97 1.98
2040 2289 1.140852 TGCACTAGTGTGGGCCATATC 59.859 52.381 23.44 3.24 43.97 1.63
2046 2513 1.202580 CCTAGATGCACTAGTGTGGGC 60.203 57.143 23.44 10.19 45.01 5.36
2078 2545 4.416738 GGGGACTGTGGCAGAGGC 62.417 72.222 16.69 13.38 35.18 4.70
2079 2546 2.608988 AGGGGACTGTGGCAGAGG 60.609 66.667 16.69 0.00 41.13 3.69
2081 2548 2.607750 GGAGGGGACTGTGGCAGA 60.608 66.667 2.91 0.00 44.43 4.26
2083 2550 2.607750 GAGGAGGGGACTGTGGCA 60.608 66.667 0.00 0.00 44.43 4.92
2087 2554 1.390125 CAGGAGAGGAGGGGACTGT 59.610 63.158 0.00 0.00 44.43 3.55
2113 2580 1.227205 CTCTGGCTGTCGATGAGGC 60.227 63.158 12.46 12.46 36.55 4.70
2139 2606 3.290308 AGAGCTACAAAGAGACACGTG 57.710 47.619 15.48 15.48 0.00 4.49
2142 2609 9.187455 GCTATAATAAGAGCTACAAAGAGACAC 57.813 37.037 0.00 0.00 36.99 3.67
2147 2614 9.751542 GAACTGCTATAATAAGAGCTACAAAGA 57.248 33.333 0.00 0.00 40.71 2.52
2185 2652 3.306019 GCCACTATGGAACCAAAACCAAG 60.306 47.826 0.00 0.00 40.96 3.61
2187 2654 2.243810 GCCACTATGGAACCAAAACCA 58.756 47.619 0.00 0.00 40.96 3.67
2189 2656 3.763897 AGATGCCACTATGGAACCAAAAC 59.236 43.478 0.00 0.00 40.96 2.43
2213 2680 2.636462 CGCCAACATGTCACGCAA 59.364 55.556 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.