AutoCloner

Multiple sequence alignment - TraesCS3D01G502600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS3D01G502600	chr3D	100.000	5515	0	0	1	5515	590941729	590947243	0.000000e+00	10185.0
1	TraesCS3D01G502600	chr3A	91.689	4825	206	58	493	5237	721350540	721355249	0.000000e+00	6508.0
2	TraesCS3D01G502600	chr3A	87.977	524	15	15	1	484	721349984	721350499	4.790000e-160	575.0
3	TraesCS3D01G502600	chr7B	94.131	903	47	3	3216	4116	317224652	317225550	0.000000e+00	1369.0
4	TraesCS3D01G502600	chr7B	96.825	252	8	0	2526	2777	317224405	317224656	6.610000e-114	422.0
5	TraesCS3D01G502600	chr1A	89.056	466	39	4	2979	3432	22869211	22869676	8.020000e-158	568.0
6	TraesCS3D01G502600	chr1A	84.225	374	32	16	2979	3347	13137844	13137493	6.840000e-89	339.0
7	TraesCS3D01G502600	chr1A	80.323	371	43	11	2031	2401	22868886	22869226	2.550000e-63	254.0
8	TraesCS3D01G502600	chr1B	88.079	302	36	0	3193	3494	23056054	23056355	5.250000e-95	359.0
9	TraesCS3D01G502600	chr1B	87.748	302	37	0	3193	3494	23034315	23034616	2.440000e-93	353.0
10	TraesCS3D01G502600	chr1B	85.441	261	37	1	2031	2291	217557064	217556805	2.530000e-68	270.0
11	TraesCS3D01G502600	chr1B	91.005	189	17	0	2979	3167	23053929	23054117	7.090000e-64	255.0
12	TraesCS3D01G502600	chr1B	85.020	247	36	1	2031	2277	217553965	217554210	3.300000e-62	250.0
13	TraesCS3D01G502600	chr1B	82.734	139	23	1	1	138	448142915	448143053	7.500000e-24	122.0
14	TraesCS3D01G502600	chr1B	92.424	66	5	0	2979	3044	217556756	217556691	1.640000e-15	95.3
15	TraesCS3D01G502600	chrUn	91.534	189	16	0	2979	3167	383533933	383533745	1.520000e-65	261.0
16	TraesCS3D01G502600	chrUn	91.228	171	15	0	2979	3149	274637742	274637572	3.320000e-57	233.0
17	TraesCS3D01G502600	chrUn	94.118	34	2	0	3426	3459	326319364	326319397	1.000000e-02	52.8
18	TraesCS3D01G502600	chrUn	94.118	34	2	0	3426	3459	357627245	357627278	1.000000e-02	52.8
19	TraesCS3D01G502600	chr2B	85.200	250	36	1	2042	2291	181698908	181699156	7.090000e-64	255.0
20	TraesCS3D01G502600	chr2B	94.366	71	4	0	2979	3049	181699205	181699275	5.840000e-20	110.0
21	TraesCS3D01G502600	chr2B	97.727	44	1	0	2316	2359	181699154	181699197	5.920000e-10	76.8
22	TraesCS3D01G502600	chr7D	94.118	34	2	0	3426	3459	631213653	631213686	1.000000e-02	52.8

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS3D01G502600	chr3D	590941729	590947243	5514	False	10185.0	10185	100.0000	1	5515	1	chr3D.!!$F1	5514
1	TraesCS3D01G502600	chr3A	721349984	721355249	5265	False	3541.5	6508	89.8330	1	5237	2	chr3A.!!$F1	5236
2	TraesCS3D01G502600	chr7B	317224405	317225550	1145	False	895.5	1369	95.4780	2526	4116	2	chr7B.!!$F1	1590
3	TraesCS3D01G502600	chr1A	22868886	22869676	790	False	411.0	568	84.6895	2031	3432	2	chr1A.!!$F1	1401
4	TraesCS3D01G502600	chr1B	23053929	23056355	2426	False	307.0	359	89.5420	2979	3494	2	chr1B.!!$F4	515

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
665	737	0.032813	ATTAGCAACAGCATGGGCCT	60.033	50.0	4.53	43.62	5.19	F
817	889	0.460811	TGCGTGGCATTCAGAGCTAG	60.461	55.0	0.00	31.71	3.42	F
2580	2665	0.603707	TGGCGCTCTTCTTCAACCTG	60.604	55.0	7.64	0.00	4.00	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1849	1934	0.550914	AGGTTGAGGTGGAGCAACAA	59.449	50.0	0.00	0.00	44.59	2.83	R
2583	2668	1.255667	TGCGGGAGAGGTTGAGGTAC	61.256	60.0	0.00	0.00	0.00	3.34	R
4565	6599	0.179111	TAGTACGTCCAGCTGCATGC	60.179	55.0	11.82	11.82	43.29	4.06	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
141	142	4.592192	CCGCGCGACTGATGGGAT	62.592	66.667	34.63	0.00	0.00	3.85
142	143	3.333189	CGCGCGACTGATGGGATG	61.333	66.667	28.94	0.00	0.00	3.51
143	144	3.643978	GCGCGACTGATGGGATGC	61.644	66.667	12.10	0.00	0.00	3.91
213	221	2.548904	CCGTGGATTTGTTTGGTTCGTA	59.451	45.455	0.00	0.00	0.00	3.43
228	236	6.533819	TGGTTCGTATCTGTTTACTGTTTG	57.466	37.500	0.00	0.00	0.00	2.93
235	243	6.183360	CGTATCTGTTTACTGTTTGCCTGTAG	60.183	42.308	0.00	0.00	0.00	2.74
352	367	2.758423	TGTGCTCACGTGGATGTAGTAT	59.242	45.455	17.00	0.00	0.00	2.12
353	368	3.116300	GTGCTCACGTGGATGTAGTATG	58.884	50.000	17.00	0.00	0.00	2.39
354	369	2.100749	TGCTCACGTGGATGTAGTATGG	59.899	50.000	17.00	0.00	0.00	2.74
355	370	2.545952	GCTCACGTGGATGTAGTATGGG	60.546	54.545	17.00	0.00	0.00	4.00
356	371	2.956333	CTCACGTGGATGTAGTATGGGA	59.044	50.000	17.00	0.00	0.00	4.37
358	373	3.964688	TCACGTGGATGTAGTATGGGATT	59.035	43.478	17.00	0.00	0.00	3.01
359	374	5.141910	TCACGTGGATGTAGTATGGGATTA	58.858	41.667	17.00	0.00	0.00	1.75
360	375	5.243060	TCACGTGGATGTAGTATGGGATTAG	59.757	44.000	17.00	0.00	0.00	1.73
361	376	5.010719	CACGTGGATGTAGTATGGGATTAGT	59.989	44.000	7.95	0.00	0.00	2.24
363	378	6.208204	ACGTGGATGTAGTATGGGATTAGTAC	59.792	42.308	0.00	0.00	0.00	2.73
365	380	7.093902	CGTGGATGTAGTATGGGATTAGTACAT	60.094	40.741	10.29	10.29	45.15	2.29
381	421	7.509236	TTAGTACATGTGGCCATATGGATAT	57.491	36.000	36.57	26.19	37.39	1.63
382	422	5.748402	AGTACATGTGGCCATATGGATATG	58.252	41.667	36.57	19.50	39.80	1.78
401	441	1.601759	GGAACTGGCAGCAGCTCAA	60.602	57.895	15.89	0.00	41.70	3.02
408	448	1.814394	TGGCAGCAGCTCAAAATGTAG	59.186	47.619	0.00	0.00	41.70	2.74
409	449	2.086869	GGCAGCAGCTCAAAATGTAGA	58.913	47.619	0.00	0.00	41.70	2.59
410	450	2.097142	GGCAGCAGCTCAAAATGTAGAG	59.903	50.000	0.00	0.00	41.70	2.43
412	452	3.438087	GCAGCAGCTCAAAATGTAGAGAA	59.562	43.478	0.00	0.00	37.91	2.87
413	453	4.096081	GCAGCAGCTCAAAATGTAGAGAAT	59.904	41.667	0.00	0.00	37.91	2.40
414	454	5.295292	GCAGCAGCTCAAAATGTAGAGAATA	59.705	40.000	0.00	0.00	37.91	1.75
415	455	6.017275	GCAGCAGCTCAAAATGTAGAGAATAT	60.017	38.462	0.00	0.00	37.91	1.28
417	457	9.217278	CAGCAGCTCAAAATGTAGAGAATATAT	57.783	33.333	0.00	0.00	33.74	0.86
418	458	9.217278	AGCAGCTCAAAATGTAGAGAATATATG	57.783	33.333	0.00	0.00	33.74	1.78
419	459	8.997323	GCAGCTCAAAATGTAGAGAATATATGT	58.003	33.333	0.00	0.00	33.74	2.29
444	484	1.275471	CGGCATGTATAGTCGCACCG	61.275	60.000	0.00	0.00	0.00	4.94
445	485	0.249322	GGCATGTATAGTCGCACCGT	60.249	55.000	0.00	0.00	0.00	4.83
446	486	1.001048	GGCATGTATAGTCGCACCGTA	60.001	52.381	0.00	0.00	0.00	4.02
447	487	2.049228	GCATGTATAGTCGCACCGTAC	58.951	52.381	0.00	0.00	0.00	3.67
448	488	2.658285	CATGTATAGTCGCACCGTACC	58.342	52.381	0.00	0.00	0.00	3.34
474	514	7.233144	CCCCCATGATGTGAATGAAATAATACA	59.767	37.037	0.00	0.00	0.00	2.29
489	529	9.221933	TGAAATAATACATTCGTTGGTTACAGT	57.778	29.630	0.00	0.00	0.00	3.55
527	599	0.459489	TTGTGCAACCAGGCAGTTTC	59.541	50.000	0.00	0.00	45.96	2.78
531	603	1.830477	TGCAACCAGGCAGTTTCTTTT	59.170	42.857	0.00	0.00	39.25	2.27
532	604	2.235898	TGCAACCAGGCAGTTTCTTTTT	59.764	40.909	0.00	0.00	39.25	1.94
533	605	2.866156	GCAACCAGGCAGTTTCTTTTTC	59.134	45.455	0.00	0.00	0.00	2.29
534	606	3.115554	CAACCAGGCAGTTTCTTTTTCG	58.884	45.455	0.00	0.00	0.00	3.46
536	608	3.020984	ACCAGGCAGTTTCTTTTTCGAA	58.979	40.909	0.00	0.00	0.00	3.71
537	609	3.181490	ACCAGGCAGTTTCTTTTTCGAAC	60.181	43.478	0.00	0.00	0.00	3.95
538	610	3.181491	CCAGGCAGTTTCTTTTTCGAACA	60.181	43.478	0.00	0.00	0.00	3.18
541	613	3.546271	GGCAGTTTCTTTTTCGAACACAC	59.454	43.478	0.00	0.00	0.00	3.82
542	614	3.546271	GCAGTTTCTTTTTCGAACACACC	59.454	43.478	0.00	0.00	0.00	4.16
543	615	3.783943	CAGTTTCTTTTTCGAACACACCG	59.216	43.478	0.00	0.00	0.00	4.94
560	632	1.978617	CGGGCAGTTGAAGGGCAAT	60.979	57.895	0.00	0.00	39.03	3.56
640	712	9.194271	GTTTAGTTACCAGAGTAAAACAGAGAG	57.806	37.037	0.00	0.00	40.12	3.20
665	737	0.032813	ATTAGCAACAGCATGGGCCT	60.033	50.000	4.53	0.00	43.62	5.19
667	739	0.623194	TAGCAACAGCATGGGCCTAA	59.377	50.000	4.53	0.00	43.62	2.69
689	761	8.469200	CCTAAAGCATATGTTCTTTCAAATCCA	58.531	33.333	10.48	0.00	34.67	3.41
690	762	9.859427	CTAAAGCATATGTTCTTTCAAATCCAA	57.141	29.630	10.48	0.00	34.67	3.53
692	764	8.937634	AAGCATATGTTCTTTCAAATCCAATC	57.062	30.769	4.29	0.00	0.00	2.67
699	771	6.760770	TGTTCTTTCAAATCCAATCCAACAAC	59.239	34.615	0.00	0.00	0.00	3.32
712	784	3.286353	TCCAACAACAAGCTGACATGAA	58.714	40.909	0.00	0.00	0.00	2.57
743	815	6.431234	CACAAACCAAGGCTAGATTTACTTCT	59.569	38.462	0.00	0.00	0.00	2.85
744	816	7.004691	ACAAACCAAGGCTAGATTTACTTCTT	58.995	34.615	0.00	0.00	0.00	2.52
748	820	5.940470	CCAAGGCTAGATTTACTTCTTGTGT	59.060	40.000	0.00	0.00	33.04	3.72
757	829	5.606348	TTTACTTCTTGTGTGGCCAAAAT	57.394	34.783	7.24	0.00	0.00	1.82
763	835	1.106351	TGTGTGGCCAAAATCACGCT	61.106	50.000	7.24	0.00	42.75	5.07
766	838	1.228398	TGGCCAAAATCACGCTCCA	60.228	52.632	0.61	0.00	0.00	3.86
783	855	3.393800	CTCCATGTTCGTCAGACAAACT	58.606	45.455	5.96	0.00	0.00	2.66
817	889	0.460811	TGCGTGGCATTCAGAGCTAG	60.461	55.000	0.00	0.00	31.71	3.42
818	890	1.770085	GCGTGGCATTCAGAGCTAGC	61.770	60.000	6.62	6.62	0.00	3.42
821	893	0.907486	TGGCATTCAGAGCTAGCAGT	59.093	50.000	18.83	0.00	0.00	4.40
822	894	1.280133	TGGCATTCAGAGCTAGCAGTT	59.720	47.619	18.83	0.00	0.00	3.16
823	895	2.501316	TGGCATTCAGAGCTAGCAGTTA	59.499	45.455	18.83	0.00	0.00	2.24
824	896	2.869192	GGCATTCAGAGCTAGCAGTTAC	59.131	50.000	18.83	2.79	0.00	2.50
825	897	3.525537	GCATTCAGAGCTAGCAGTTACA	58.474	45.455	18.83	0.00	0.00	2.41
826	898	3.555139	GCATTCAGAGCTAGCAGTTACAG	59.445	47.826	18.83	2.91	0.00	2.74
840	917	6.055588	AGCAGTTACAGTACAACAAAGTGAT	58.944	36.000	0.00	0.00	0.00	3.06
855	932	4.730949	AAGTGATCTGCCCAAAATCATG	57.269	40.909	0.00	0.00	32.45	3.07
856	933	2.429610	AGTGATCTGCCCAAAATCATGC	59.570	45.455	0.00	0.00	32.45	4.06
858	935	2.691526	TGATCTGCCCAAAATCATGCTC	59.308	45.455	0.00	0.00	0.00	4.26
859	936	2.519771	TCTGCCCAAAATCATGCTCT	57.480	45.000	0.00	0.00	0.00	4.09
860	937	2.097036	TCTGCCCAAAATCATGCTCTG	58.903	47.619	0.00	0.00	0.00	3.35
861	938	2.097036	CTGCCCAAAATCATGCTCTGA	58.903	47.619	0.00	0.00	38.53	3.27
862	939	2.494471	CTGCCCAAAATCATGCTCTGAA	59.506	45.455	0.00	0.00	37.44	3.02
882	962	2.047274	CCACCGCTACCACCAGTG	60.047	66.667	0.00	0.00	0.00	3.66
912	992	1.344942	GCAGACGGACAGTAACAGCG	61.345	60.000	0.00	0.00	0.00	5.18
913	993	1.080705	AGACGGACAGTAACAGCGC	60.081	57.895	0.00	0.00	0.00	5.92
914	994	2.048503	ACGGACAGTAACAGCGCC	60.049	61.111	2.29	0.00	0.00	6.53
915	995	2.813908	CGGACAGTAACAGCGCCC	60.814	66.667	2.29	0.00	0.00	6.13
916	996	2.813908	GGACAGTAACAGCGCCCG	60.814	66.667	2.29	0.00	0.00	6.13
917	997	2.048503	GACAGTAACAGCGCCCGT	60.049	61.111	2.29	0.00	0.00	5.28
918	998	2.357034	ACAGTAACAGCGCCCGTG	60.357	61.111	2.29	0.00	0.00	4.94
919	999	3.788766	CAGTAACAGCGCCCGTGC	61.789	66.667	2.29	0.00	0.00	5.34
981	1061	2.335712	GCGGTGCCTTCTTCCAAGG	61.336	63.158	0.00	0.00	40.39	3.61
992	1072	3.407967	TCCAAGGTGGATCGCCCC	61.408	66.667	0.00	0.00	42.67	5.80
993	1073	4.856801	CCAAGGTGGATCGCCCCG	62.857	72.222	1.81	0.00	40.96	5.73
994	1074	4.856801	CAAGGTGGATCGCCCCGG	62.857	72.222	0.00	0.00	33.99	5.73
1063	1143	3.324108	GCGTCCAACCTACCCCCA	61.324	66.667	0.00	0.00	0.00	4.96
1064	1144	2.666812	CGTCCAACCTACCCCCAC	59.333	66.667	0.00	0.00	0.00	4.61
1065	1145	2.963101	CGTCCAACCTACCCCCACC	61.963	68.421	0.00	0.00	0.00	4.61
1066	1146	2.204182	TCCAACCTACCCCCACCC	60.204	66.667	0.00	0.00	0.00	4.61
1067	1147	2.204244	CCAACCTACCCCCACCCT	60.204	66.667	0.00	0.00	0.00	4.34
1068	1148	2.306384	CCAACCTACCCCCACCCTC	61.306	68.421	0.00	0.00	0.00	4.30
1069	1149	1.540367	CAACCTACCCCCACCCTCA	60.540	63.158	0.00	0.00	0.00	3.86
1070	1150	1.137594	CAACCTACCCCCACCCTCAA	61.138	60.000	0.00	0.00	0.00	3.02
1098	1178	4.147449	CGCCTCCACCATGCTCGA	62.147	66.667	0.00	0.00	0.00	4.04
1105	1185	1.176527	CCACCATGCTCGAACCAAAT	58.823	50.000	0.00	0.00	0.00	2.32
1132	1217	1.532078	TCGCCCACTGTACCACTCA	60.532	57.895	0.00	0.00	0.00	3.41
1161	1246	5.380900	TGTCCATCTACCTCACTAGATCTG	58.619	45.833	5.18	0.00	32.08	2.90
1200	1285	2.118679	CACCTCCATATCACTCCACCA	58.881	52.381	0.00	0.00	0.00	4.17
1293	1378	2.422231	CGTGCTCCTCCTCCTCCTG	61.422	68.421	0.00	0.00	0.00	3.86
1392	1477	2.358737	CTGGTGGTGTTCCGCTCC	60.359	66.667	0.00	0.00	43.20	4.70
1479	1564	4.293648	CACGTGGAGTGCGACCCA	62.294	66.667	7.95	0.00	44.72	4.51
1669	1754	3.685214	CTCGACCTCTCCCGCAACG	62.685	68.421	0.00	0.00	0.00	4.10
1731	1816	2.188161	CCTCCGCTACCTCGACCTC	61.188	68.421	0.00	0.00	0.00	3.85
1734	1819	2.188161	CCGCTACCTCGACCTCTCC	61.188	68.421	0.00	0.00	0.00	3.71
1735	1820	2.535788	CGCTACCTCGACCTCTCCG	61.536	68.421	0.00	0.00	0.00	4.63
1736	1821	2.188161	GCTACCTCGACCTCTCCGG	61.188	68.421	0.00	0.00	39.35	5.14
1737	1822	1.526455	CTACCTCGACCTCTCCGGG	60.526	68.421	0.00	0.00	36.97	5.73
1807	1892	2.599281	TCGTGCTCTCCGGGAACA	60.599	61.111	0.00	0.00	0.00	3.18
1809	1894	2.266055	GTGCTCTCCGGGAACAGG	59.734	66.667	0.00	0.00	0.00	4.00
1962	2047	2.293122	TGATTTGTCAAGAAACCGCCTG	59.707	45.455	0.00	0.00	0.00	4.85
2111	2196	4.117372	CGACAACGCCTTCGACGC	62.117	66.667	0.00	0.00	37.43	5.19
2433	2518	2.158959	CATGTTCGACGTCGGGCTC	61.159	63.158	35.05	22.19	40.29	4.70
2520	2605	3.997064	GACGCTGCAGTGGCTCGAT	62.997	63.158	29.60	8.89	41.91	3.59
2523	2608	1.882167	GCTGCAGTGGCTCGATCTC	60.882	63.158	16.64	0.00	41.91	2.75
2580	2665	0.603707	TGGCGCTCTTCTTCAACCTG	60.604	55.000	7.64	0.00	0.00	4.00
2583	2668	1.630244	CGCTCTTCTTCAACCTGCGG	61.630	60.000	0.00	0.00	38.54	5.69
2673	2758	4.057428	GTGCTCGACCTCCGCAGT	62.057	66.667	0.00	0.00	38.37	4.40
2793	2878	1.144936	CATCGGGAAGTGCTCCTCC	59.855	63.158	0.00	0.00	44.68	4.30
2811	2896	4.165758	TCCTCCCTCTACCTACTGTAAGAC	59.834	50.000	0.00	0.00	37.43	3.01
2829	2918	8.896320	TGTAAGACTTCTTAATTTGCTACACA	57.104	30.769	0.14	0.00	39.84	3.72
2976	3065	1.063942	TGGAGATTCTACGGCTGGAGA	60.064	52.381	2.28	2.28	0.00	3.71
3179	3272	1.675641	GATGAACGTGCCCAAGCCT	60.676	57.895	0.00	0.00	38.69	4.58
3204	5217	3.685435	TCGACCCCAACGAGTACC	58.315	61.111	0.00	0.00	34.85	3.34
3347	5360	2.038329	TCCATCGTCCTCGGGGTT	59.962	61.111	0.00	0.00	37.69	4.11
3623	5636	2.831597	GTTTGGGACGACTTACCGG	58.168	57.895	0.00	0.00	0.00	5.28
3629	5642	3.690108	GACGACTTACCGGGCGTCC	62.690	68.421	18.68	0.00	45.16	4.79
4427	6451	3.823330	ACGTCGCAGATCCCGTCC	61.823	66.667	0.00	0.00	40.67	4.79
4520	6544	1.531058	GCGCAACTTTTCTGACACGTT	60.531	47.619	0.30	0.00	0.00	3.99
4537	6561	2.548057	ACGTTAAAGTACGACGACCAGA	59.452	45.455	16.77	0.00	43.99	3.86
4538	6562	3.159026	CGTTAAAGTACGACGACCAGAG	58.841	50.000	0.00	0.00	43.99	3.35
4539	6563	2.907910	TAAAGTACGACGACCAGAGC	57.092	50.000	0.00	0.00	0.00	4.09
4540	6564	0.956633	AAAGTACGACGACCAGAGCA	59.043	50.000	0.00	0.00	0.00	4.26
4541	6565	0.522180	AAGTACGACGACCAGAGCAG	59.478	55.000	0.00	0.00	0.00	4.24
4542	6566	0.321387	AGTACGACGACCAGAGCAGA	60.321	55.000	0.00	0.00	0.00	4.26
4543	6567	0.097325	GTACGACGACCAGAGCAGAG	59.903	60.000	0.00	0.00	0.00	3.35
4545	6569	2.695759	CGACGACCAGAGCAGAGCT	61.696	63.158	0.00	0.00	43.88	4.09
4549	6573	0.380378	CGACCAGAGCAGAGCTAGAC	59.620	60.000	0.00	0.00	39.88	2.59
4565	6599	8.188373	AGAGCTAGACGAGATCCATTGATTGG	62.188	46.154	0.00	0.00	41.87	3.16
4573	6607	0.462375	TCCATTGATTGGCATGCAGC	59.538	50.000	21.36	2.72	46.01	5.25
4574	6608	0.464036	CCATTGATTGGCATGCAGCT	59.536	50.000	21.36	1.97	44.79	4.24
4576	6610	0.464036	ATTGATTGGCATGCAGCTGG	59.536	50.000	21.36	0.00	44.79	4.85
4582	6616	2.464459	GGCATGCAGCTGGACGTAC	61.464	63.158	21.36	2.92	44.79	3.67
4583	6617	1.448540	GCATGCAGCTGGACGTACT	60.449	57.895	17.12	0.00	41.15	2.73
4584	6618	0.179111	GCATGCAGCTGGACGTACTA	60.179	55.000	17.12	0.00	41.15	1.82
4585	6619	1.560923	CATGCAGCTGGACGTACTAC	58.439	55.000	17.12	0.00	0.00	2.73
4609	6643	0.389817	CATGGCCATGCATGCATAGC	60.390	55.000	34.23	34.23	39.66	2.97
4625	6659	0.881796	TAGCATGGATCCGCGAGTAG	59.118	55.000	8.23	0.00	0.00	2.57
4626	6660	1.109920	AGCATGGATCCGCGAGTAGT	61.110	55.000	8.23	0.00	0.00	2.73
4627	6661	0.596577	GCATGGATCCGCGAGTAGTA	59.403	55.000	8.23	0.00	0.00	1.82
4628	6662	1.666311	GCATGGATCCGCGAGTAGTAC	60.666	57.143	8.23	0.00	0.00	2.73
4649	6683	4.312383	CGTGCCGACGTGCATATA	57.688	55.556	12.93	0.00	44.30	0.86
4650	6684	2.809181	CGTGCCGACGTGCATATAT	58.191	52.632	12.93	0.00	44.30	0.86
4651	6685	1.136690	CGTGCCGACGTGCATATATT	58.863	50.000	12.93	0.00	44.30	1.28
4652	6686	1.136639	CGTGCCGACGTGCATATATTG	60.137	52.381	12.93	0.00	44.30	1.90
4653	6687	2.131972	GTGCCGACGTGCATATATTGA	58.868	47.619	12.93	0.00	44.30	2.57
4668	6702	4.767578	ATATTGATGCTCTCCACTGTGT	57.232	40.909	7.08	0.00	0.00	3.72
4756	6797	2.941428	TGTATACAGTGTGTCGTGCTG	58.059	47.619	5.88	0.00	36.41	4.41
4759	6800	1.744320	TACAGTGTGTCGTGCTGCCT	61.744	55.000	5.88	0.00	33.87	4.75
4769	6810	2.806244	GTCGTGCTGCCTTTTTCTCTTA	59.194	45.455	0.00	0.00	0.00	2.10
4774	6815	4.919754	GTGCTGCCTTTTTCTCTTATTGTG	59.080	41.667	0.00	0.00	0.00	3.33
4775	6816	3.922850	GCTGCCTTTTTCTCTTATTGTGC	59.077	43.478	0.00	0.00	0.00	4.57
4776	6817	4.321527	GCTGCCTTTTTCTCTTATTGTGCT	60.322	41.667	0.00	0.00	0.00	4.40
4777	6818	5.776744	CTGCCTTTTTCTCTTATTGTGCTT	58.223	37.500	0.00	0.00	0.00	3.91
4778	6819	6.160576	TGCCTTTTTCTCTTATTGTGCTTT	57.839	33.333	0.00	0.00	0.00	3.51
4779	6820	6.581712	TGCCTTTTTCTCTTATTGTGCTTTT	58.418	32.000	0.00	0.00	0.00	2.27
4780	6821	6.479660	TGCCTTTTTCTCTTATTGTGCTTTTG	59.520	34.615	0.00	0.00	0.00	2.44
4781	6822	6.073602	GCCTTTTTCTCTTATTGTGCTTTTGG	60.074	38.462	0.00	0.00	0.00	3.28
4782	6823	6.073602	CCTTTTTCTCTTATTGTGCTTTTGGC	60.074	38.462	0.00	0.00	42.22	4.52
4783	6824	5.789643	TTTCTCTTATTGTGCTTTTGGCT	57.210	34.783	0.00	0.00	42.39	4.75
4784	6825	5.789643	TTCTCTTATTGTGCTTTTGGCTT	57.210	34.783	0.00	0.00	42.39	4.35
4785	6826	5.125100	TCTCTTATTGTGCTTTTGGCTTG	57.875	39.130	0.00	0.00	42.39	4.01
4795	6836	2.212652	CTTTTGGCTTGGCTTTTGGAC	58.787	47.619	0.00	0.00	0.00	4.02
4835	6876	8.049117	TGATGAGAGGCATTATTTTTCTACTGT	58.951	33.333	0.00	0.00	37.34	3.55
4870	6912	1.002900	GCTAGCTAGCTCTCGTGACTG	60.003	57.143	33.71	1.00	45.62	3.51
4876	6918	1.323412	AGCTCTCGTGACTGTTGTCT	58.677	50.000	0.00	0.00	43.29	3.41
4890	6932	1.863662	TTGTCTCCGGTCGAGCTGTC	61.864	60.000	13.48	2.98	38.62	3.51
4895	6937	3.733960	CGGTCGAGCTGTCACGGA	61.734	66.667	13.48	0.00	0.00	4.69
4904	6946	1.569493	CTGTCACGGAAAGTTGGCG	59.431	57.895	0.00	0.00	0.00	5.69
4914	6956	0.028374	AAAGTTGGCGTACGTGTTGC	59.972	50.000	17.90	0.00	0.00	4.17
4920	6962	1.082431	GCGTACGTGTTGCAATGCA	60.082	52.632	17.90	2.72	36.47	3.96
4922	6964	0.234625	CGTACGTGTTGCAATGCACT	59.765	50.000	7.72	7.60	38.71	4.40
4923	6965	1.673760	GTACGTGTTGCAATGCACTG	58.326	50.000	7.72	12.07	38.71	3.66
4924	6966	1.002900	GTACGTGTTGCAATGCACTGT	60.003	47.619	7.72	15.83	38.71	3.55
4925	6967	0.248580	ACGTGTTGCAATGCACTGTG	60.249	50.000	7.72	2.76	38.71	3.66
4940	6982	4.367023	GTGCGTCCGTGCCCACTA	62.367	66.667	0.00	0.00	0.00	2.74
4941	6983	4.367023	TGCGTCCGTGCCCACTAC	62.367	66.667	0.00	0.00	0.00	2.73
4942	6984	4.367023	GCGTCCGTGCCCACTACA	62.367	66.667	0.00	0.00	0.00	2.74
4943	6985	2.126071	CGTCCGTGCCCACTACAG	60.126	66.667	0.00	0.00	0.00	2.74
4944	6986	2.434359	GTCCGTGCCCACTACAGC	60.434	66.667	0.00	0.00	0.00	4.40
4945	6987	4.063967	TCCGTGCCCACTACAGCG	62.064	66.667	0.00	0.00	0.00	5.18
4948	6990	3.121030	GTGCCCACTACAGCGCAG	61.121	66.667	11.47	3.33	39.31	5.18
4975	7017	3.553922	CCGTTATCTCTTCTCATCTGGGC	60.554	52.174	0.00	0.00	0.00	5.36
4987	7029	2.811431	TCATCTGGGCGTTACTTTGTTG	59.189	45.455	0.00	0.00	0.00	3.33
4988	7030	2.335316	TCTGGGCGTTACTTTGTTGT	57.665	45.000	0.00	0.00	0.00	3.32
5008	7050	3.119531	TGTTTCCTTGTTGACTGTTGCTG	60.120	43.478	0.00	0.00	0.00	4.41
5010	7052	1.027357	CCTTGTTGACTGTTGCTGCT	58.973	50.000	0.00	0.00	0.00	4.24
5011	7053	1.268896	CCTTGTTGACTGTTGCTGCTG	60.269	52.381	0.00	0.00	0.00	4.41
5012	7054	0.101040	TTGTTGACTGTTGCTGCTGC	59.899	50.000	8.89	8.89	40.20	5.25
5013	7055	0.749091	TGTTGACTGTTGCTGCTGCT	60.749	50.000	17.00	0.00	40.48	4.24
5014	7056	0.383231	GTTGACTGTTGCTGCTGCTT	59.617	50.000	17.00	0.00	40.48	3.91
5084	7134	2.894765	TCCGCCGTGGATAGATTTATGA	59.105	45.455	0.00	0.00	43.74	2.15
5087	7137	4.093408	CCGCCGTGGATAGATTTATGAATG	59.907	45.833	0.00	0.00	42.00	2.67
5093	7143	7.394099	CGTGGATAGATTTATGAATGTATGCG	58.606	38.462	12.02	7.38	40.46	4.73
5105	7155	0.869068	TGTATGCGTTCACCGTTTGG	59.131	50.000	0.00	0.00	42.84	3.28
5106	7156	0.167251	GTATGCGTTCACCGTTTGGG	59.833	55.000	0.00	0.00	40.75	4.12
5138	7213	6.318648	CACGGGATCTTAGATTGGATTTTCAA	59.681	38.462	0.00	0.00	0.00	2.69
5147	7222	8.568676	TTAGATTGGATTTTCAATTACGGACA	57.431	30.769	0.00	0.00	37.47	4.02
5190	7265	8.812147	CAACATTGCTATAGTACCTTCGATTA	57.188	34.615	0.84	0.00	0.00	1.75
5218	7295	4.339247	GCACTGATTCTCTCTCTAGCTTCT	59.661	45.833	0.00	0.00	0.00	2.85
5219	7296	5.734220	GCACTGATTCTCTCTCTAGCTTCTG	60.734	48.000	0.00	0.00	0.00	3.02
5221	7298	3.314913	TGATTCTCTCTCTAGCTTCTGCG	59.685	47.826	0.00	0.00	45.42	5.18
5225	7302	2.163412	CTCTCTCTAGCTTCTGCGTGTT	59.837	50.000	0.00	0.00	45.42	3.32
5229	7306	2.602211	CTCTAGCTTCTGCGTGTTCATG	59.398	50.000	0.00	0.00	45.42	3.07
5237	7314	1.140052	CTGCGTGTTCATGGGGGTATA	59.860	52.381	0.00	0.00	0.00	1.47
5238	7315	1.771854	TGCGTGTTCATGGGGGTATAT	59.228	47.619	0.00	0.00	0.00	0.86
5239	7316	2.973406	TGCGTGTTCATGGGGGTATATA	59.027	45.455	0.00	0.00	0.00	0.86
5240	7317	3.244284	TGCGTGTTCATGGGGGTATATAC	60.244	47.826	4.14	4.14	0.00	1.47
5241	7318	3.867216	GCGTGTTCATGGGGGTATATACC	60.867	52.174	21.88	21.88	45.71	2.73
5255	7332	6.527057	GGTATATACCATGTGTCTCCTACC	57.473	45.833	24.46	0.00	45.73	3.18
5256	7333	5.125097	GGTATATACCATGTGTCTCCTACCG	59.875	48.000	24.46	0.00	45.73	4.02
5257	7334	2.812836	TACCATGTGTCTCCTACCGA	57.187	50.000	0.00	0.00	0.00	4.69
5258	7335	1.933021	ACCATGTGTCTCCTACCGAA	58.067	50.000	0.00	0.00	0.00	4.30
5259	7336	1.825474	ACCATGTGTCTCCTACCGAAG	59.175	52.381	0.00	0.00	0.00	3.79
5260	7337	2.100197	CCATGTGTCTCCTACCGAAGA	58.900	52.381	0.00	0.00	0.00	2.87
5261	7338	2.695666	CCATGTGTCTCCTACCGAAGAT	59.304	50.000	0.00	0.00	0.00	2.40
5262	7339	3.889538	CCATGTGTCTCCTACCGAAGATA	59.110	47.826	0.00	0.00	0.00	1.98
5263	7340	4.341235	CCATGTGTCTCCTACCGAAGATAA	59.659	45.833	0.00	0.00	0.00	1.75
5264	7341	5.011125	CCATGTGTCTCCTACCGAAGATAAT	59.989	44.000	0.00	0.00	0.00	1.28
5265	7342	6.463049	CCATGTGTCTCCTACCGAAGATAATT	60.463	42.308	0.00	0.00	0.00	1.40
5266	7343	7.255836	CCATGTGTCTCCTACCGAAGATAATTA	60.256	40.741	0.00	0.00	0.00	1.40
5267	7344	7.273320	TGTGTCTCCTACCGAAGATAATTAG	57.727	40.000	0.00	0.00	0.00	1.73
5268	7345	6.832384	TGTGTCTCCTACCGAAGATAATTAGT	59.168	38.462	0.00	0.00	0.00	2.24
5269	7346	7.341256	TGTGTCTCCTACCGAAGATAATTAGTT	59.659	37.037	0.00	0.00	0.00	2.24
5270	7347	8.844244	GTGTCTCCTACCGAAGATAATTAGTTA	58.156	37.037	0.00	0.00	0.00	2.24
5271	7348	9.412460	TGTCTCCTACCGAAGATAATTAGTTAA	57.588	33.333	0.00	0.00	0.00	2.01
5272	7349	9.896263	GTCTCCTACCGAAGATAATTAGTTAAG	57.104	37.037	0.00	0.00	0.00	1.85
5273	7350	9.075678	TCTCCTACCGAAGATAATTAGTTAAGG	57.924	37.037	0.00	0.00	0.00	2.69
5274	7351	8.773033	TCCTACCGAAGATAATTAGTTAAGGT	57.227	34.615	8.92	8.92	0.00	3.50
5275	7352	8.854117	TCCTACCGAAGATAATTAGTTAAGGTC	58.146	37.037	7.65	0.00	0.00	3.85
5276	7353	8.087136	CCTACCGAAGATAATTAGTTAAGGTCC	58.913	40.741	7.65	0.00	0.00	4.46
5277	7354	6.824553	ACCGAAGATAATTAGTTAAGGTCCC	58.175	40.000	0.00	0.00	0.00	4.46
5278	7355	5.924825	CCGAAGATAATTAGTTAAGGTCCCG	59.075	44.000	0.00	0.00	0.00	5.14
5279	7356	6.239120	CCGAAGATAATTAGTTAAGGTCCCGA	60.239	42.308	0.00	0.00	0.00	5.14
5280	7357	6.640092	CGAAGATAATTAGTTAAGGTCCCGAC	59.360	42.308	0.00	0.00	0.00	4.79
5281	7358	7.427989	AAGATAATTAGTTAAGGTCCCGACA	57.572	36.000	0.00	0.00	0.00	4.35
5282	7359	6.814043	AGATAATTAGTTAAGGTCCCGACAC	58.186	40.000	0.00	0.00	0.00	3.67
5283	7360	4.895668	AATTAGTTAAGGTCCCGACACA	57.104	40.909	0.00	0.00	0.00	3.72
5284	7361	4.895668	ATTAGTTAAGGTCCCGACACAA	57.104	40.909	0.00	0.00	0.00	3.33
5285	7362	4.895668	TTAGTTAAGGTCCCGACACAAT	57.104	40.909	0.00	0.00	0.00	2.71
5286	7363	3.053831	AGTTAAGGTCCCGACACAATG	57.946	47.619	0.00	0.00	0.00	2.82
5287	7364	2.370849	AGTTAAGGTCCCGACACAATGT	59.629	45.455	0.00	0.00	0.00	2.71
5288	7365	2.465860	TAAGGTCCCGACACAATGTG	57.534	50.000	12.40	12.40	39.75	3.21
5300	7377	3.527533	ACACAATGTGTCGTGTTACTGT	58.472	40.909	13.98	0.00	43.92	3.55
5301	7378	3.936453	ACACAATGTGTCGTGTTACTGTT	59.064	39.130	13.98	0.00	43.92	3.16
5302	7379	4.393680	ACACAATGTGTCGTGTTACTGTTT	59.606	37.500	13.98	0.00	43.92	2.83
5303	7380	5.106475	ACACAATGTGTCGTGTTACTGTTTT	60.106	36.000	13.98	0.00	43.92	2.43
5304	7381	5.797934	CACAATGTGTCGTGTTACTGTTTTT	59.202	36.000	5.00	0.00	0.00	1.94
5305	7382	6.021782	CACAATGTGTCGTGTTACTGTTTTTC	60.022	38.462	5.00	0.00	0.00	2.29
5306	7383	6.128117	ACAATGTGTCGTGTTACTGTTTTTCT	60.128	34.615	0.00	0.00	0.00	2.52
5307	7384	5.866335	TGTGTCGTGTTACTGTTTTTCTT	57.134	34.783	0.00	0.00	0.00	2.52
5308	7385	5.623335	TGTGTCGTGTTACTGTTTTTCTTG	58.377	37.500	0.00	0.00	0.00	3.02
5309	7386	5.025826	GTGTCGTGTTACTGTTTTTCTTGG	58.974	41.667	0.00	0.00	0.00	3.61
5310	7387	4.033019	GTCGTGTTACTGTTTTTCTTGGC	58.967	43.478	0.00	0.00	0.00	4.52
5311	7388	3.033185	CGTGTTACTGTTTTTCTTGGCG	58.967	45.455	0.00	0.00	0.00	5.69
5312	7389	3.486209	CGTGTTACTGTTTTTCTTGGCGT	60.486	43.478	0.00	0.00	0.00	5.68
5313	7390	4.417506	GTGTTACTGTTTTTCTTGGCGTT	58.582	39.130	0.00	0.00	0.00	4.84
5314	7391	4.860352	GTGTTACTGTTTTTCTTGGCGTTT	59.140	37.500	0.00	0.00	0.00	3.60
5315	7392	5.346551	GTGTTACTGTTTTTCTTGGCGTTTT	59.653	36.000	0.00	0.00	0.00	2.43
5316	7393	6.527372	GTGTTACTGTTTTTCTTGGCGTTTTA	59.473	34.615	0.00	0.00	0.00	1.52
5317	7394	7.221259	GTGTTACTGTTTTTCTTGGCGTTTTAT	59.779	33.333	0.00	0.00	0.00	1.40
5318	7395	7.760340	TGTTACTGTTTTTCTTGGCGTTTTATT	59.240	29.630	0.00	0.00	0.00	1.40
5319	7396	8.597227	GTTACTGTTTTTCTTGGCGTTTTATTT	58.403	29.630	0.00	0.00	0.00	1.40
5320	7397	7.603963	ACTGTTTTTCTTGGCGTTTTATTTT	57.396	28.000	0.00	0.00	0.00	1.82
5321	7398	7.460296	ACTGTTTTTCTTGGCGTTTTATTTTG	58.540	30.769	0.00	0.00	0.00	2.44
5322	7399	6.251549	TGTTTTTCTTGGCGTTTTATTTTGC	58.748	32.000	0.00	0.00	0.00	3.68
5323	7400	6.092807	TGTTTTTCTTGGCGTTTTATTTTGCT	59.907	30.769	0.00	0.00	0.00	3.91
5324	7401	6.670077	TTTTCTTGGCGTTTTATTTTGCTT	57.330	29.167	0.00	0.00	0.00	3.91
5325	7402	6.670077	TTTCTTGGCGTTTTATTTTGCTTT	57.330	29.167	0.00	0.00	0.00	3.51
5326	7403	6.670077	TTCTTGGCGTTTTATTTTGCTTTT	57.330	29.167	0.00	0.00	0.00	2.27
5327	7404	6.042144	TCTTGGCGTTTTATTTTGCTTTTG	57.958	33.333	0.00	0.00	0.00	2.44
5328	7405	4.802876	TGGCGTTTTATTTTGCTTTTGG	57.197	36.364	0.00	0.00	0.00	3.28
5329	7406	4.442706	TGGCGTTTTATTTTGCTTTTGGA	58.557	34.783	0.00	0.00	0.00	3.53
5330	7407	5.059833	TGGCGTTTTATTTTGCTTTTGGAT	58.940	33.333	0.00	0.00	0.00	3.41
5331	7408	5.049818	TGGCGTTTTATTTTGCTTTTGGATG	60.050	36.000	0.00	0.00	0.00	3.51
5332	7409	5.049749	GGCGTTTTATTTTGCTTTTGGATGT	60.050	36.000	0.00	0.00	0.00	3.06
5333	7410	6.070829	GCGTTTTATTTTGCTTTTGGATGTC	58.929	36.000	0.00	0.00	0.00	3.06
5334	7411	6.288419	CGTTTTATTTTGCTTTTGGATGTCG	58.712	36.000	0.00	0.00	0.00	4.35
5335	7412	6.143118	CGTTTTATTTTGCTTTTGGATGTCGA	59.857	34.615	0.00	0.00	0.00	4.20
5336	7413	7.306283	CGTTTTATTTTGCTTTTGGATGTCGAA	60.306	33.333	0.00	0.00	0.00	3.71
5337	7414	8.331742	GTTTTATTTTGCTTTTGGATGTCGAAA	58.668	29.630	0.00	0.00	0.00	3.46
5338	7415	8.600449	TTTATTTTGCTTTTGGATGTCGAAAT	57.400	26.923	0.00	0.00	0.00	2.17
5339	7416	5.903764	TTTTGCTTTTGGATGTCGAAATG	57.096	34.783	0.00	0.00	0.00	2.32
5340	7417	4.582701	TTGCTTTTGGATGTCGAAATGT	57.417	36.364	0.00	0.00	0.00	2.71
5341	7418	3.899734	TGCTTTTGGATGTCGAAATGTG	58.100	40.909	0.00	0.00	0.00	3.21
5342	7419	3.567585	TGCTTTTGGATGTCGAAATGTGA	59.432	39.130	0.00	0.00	0.00	3.58
5343	7420	4.218200	TGCTTTTGGATGTCGAAATGTGAT	59.782	37.500	0.00	0.00	0.00	3.06
5344	7421	5.163513	GCTTTTGGATGTCGAAATGTGATT	58.836	37.500	0.00	0.00	0.00	2.57
5345	7422	5.287035	GCTTTTGGATGTCGAAATGTGATTC	59.713	40.000	0.00	0.00	0.00	2.52
5346	7423	4.963276	TTGGATGTCGAAATGTGATTCC	57.037	40.909	0.00	0.00	0.00	3.01
5347	7424	4.220693	TGGATGTCGAAATGTGATTCCT	57.779	40.909	0.00	0.00	0.00	3.36
5348	7425	3.940852	TGGATGTCGAAATGTGATTCCTG	59.059	43.478	0.00	0.00	0.00	3.86
5349	7426	4.191544	GGATGTCGAAATGTGATTCCTGA	58.808	43.478	0.00	0.00	0.00	3.86
5350	7427	4.034510	GGATGTCGAAATGTGATTCCTGAC	59.965	45.833	0.00	0.00	0.00	3.51
5351	7428	2.993220	TGTCGAAATGTGATTCCTGACG	59.007	45.455	0.00	0.00	0.00	4.35
5352	7429	1.999735	TCGAAATGTGATTCCTGACGC	59.000	47.619	0.00	0.00	0.00	5.19
5353	7430	1.731709	CGAAATGTGATTCCTGACGCA	59.268	47.619	0.00	0.00	0.00	5.24
5354	7431	2.352651	CGAAATGTGATTCCTGACGCAT	59.647	45.455	0.00	0.00	38.59	4.73
5355	7432	3.181507	CGAAATGTGATTCCTGACGCATT	60.182	43.478	0.00	0.00	45.11	3.56
5356	7433	4.346129	GAAATGTGATTCCTGACGCATTC	58.654	43.478	0.00	0.00	43.33	2.67
5357	7434	2.768253	TGTGATTCCTGACGCATTCT	57.232	45.000	0.00	0.00	0.00	2.40
5358	7435	2.621338	TGTGATTCCTGACGCATTCTC	58.379	47.619	0.00	0.00	0.00	2.87
5359	7436	2.234661	TGTGATTCCTGACGCATTCTCT	59.765	45.455	0.00	0.00	0.00	3.10
5360	7437	3.265791	GTGATTCCTGACGCATTCTCTT	58.734	45.455	0.00	0.00	0.00	2.85
5361	7438	3.686726	GTGATTCCTGACGCATTCTCTTT	59.313	43.478	0.00	0.00	0.00	2.52
5362	7439	3.686241	TGATTCCTGACGCATTCTCTTTG	59.314	43.478	0.00	0.00	0.00	2.77
5363	7440	2.839486	TCCTGACGCATTCTCTTTGT	57.161	45.000	0.00	0.00	0.00	2.83
5364	7441	2.416747	TCCTGACGCATTCTCTTTGTG	58.583	47.619	0.00	0.00	0.00	3.33
5365	7442	2.037121	TCCTGACGCATTCTCTTTGTGA	59.963	45.455	0.00	0.00	0.00	3.58
5366	7443	2.414481	CCTGACGCATTCTCTTTGTGAG	59.586	50.000	0.00	0.00	43.96	3.51
5367	7444	2.414481	CTGACGCATTCTCTTTGTGAGG	59.586	50.000	0.00	0.00	42.86	3.86
5368	7445	1.734465	GACGCATTCTCTTTGTGAGGG	59.266	52.381	0.00	0.00	42.86	4.30
5369	7446	0.449388	CGCATTCTCTTTGTGAGGGC	59.551	55.000	0.00	0.00	42.86	5.19
5370	7447	1.538047	GCATTCTCTTTGTGAGGGCA	58.462	50.000	0.00	0.00	42.86	5.36
5371	7448	1.200948	GCATTCTCTTTGTGAGGGCAC	59.799	52.381	0.00	0.00	45.35	5.01
5372	7449	2.787994	CATTCTCTTTGTGAGGGCACT	58.212	47.619	0.00	0.00	45.36	4.40
5373	7450	3.152341	CATTCTCTTTGTGAGGGCACTT	58.848	45.455	0.00	0.00	45.36	3.16
5374	7451	2.550830	TCTCTTTGTGAGGGCACTTC	57.449	50.000	0.00	0.00	45.36	3.01
5375	7452	1.072331	TCTCTTTGTGAGGGCACTTCC	59.928	52.381	0.00	0.00	45.36	3.46
5376	7453	0.843309	TCTTTGTGAGGGCACTTCCA	59.157	50.000	0.00	0.00	45.36	3.53
5377	7454	1.214175	TCTTTGTGAGGGCACTTCCAA	59.786	47.619	0.00	0.00	45.36	3.53
5378	7455	2.158475	TCTTTGTGAGGGCACTTCCAAT	60.158	45.455	0.00	0.00	45.36	3.16
5379	7456	1.619654	TTGTGAGGGCACTTCCAATG	58.380	50.000	0.00	0.00	45.36	2.82
5380	7457	0.895100	TGTGAGGGCACTTCCAATGC	60.895	55.000	0.00	0.00	45.36	3.56
5381	7458	0.610232	GTGAGGGCACTTCCAATGCT	60.610	55.000	0.00	0.00	42.93	3.79
5382	7459	0.322816	TGAGGGCACTTCCAATGCTC	60.323	55.000	0.00	0.00	44.41	4.26
5383	7460	1.000396	AGGGCACTTCCAATGCTCC	60.000	57.895	0.00	0.00	45.25	4.70
5384	7461	1.000396	GGGCACTTCCAATGCTCCT	60.000	57.895	0.00	0.00	42.93	3.69
5385	7462	0.255890	GGGCACTTCCAATGCTCCTA	59.744	55.000	0.00	0.00	42.93	2.94
5386	7463	1.133668	GGGCACTTCCAATGCTCCTAT	60.134	52.381	0.00	0.00	42.93	2.57
5387	7464	1.952296	GGCACTTCCAATGCTCCTATG	59.048	52.381	0.00	0.00	42.93	2.23
5388	7465	2.648059	GCACTTCCAATGCTCCTATGT	58.352	47.619	0.00	0.00	40.08	2.29
5389	7466	3.019564	GCACTTCCAATGCTCCTATGTT	58.980	45.455	0.00	0.00	40.08	2.71
5390	7467	4.199310	GCACTTCCAATGCTCCTATGTTA	58.801	43.478	0.00	0.00	40.08	2.41
5391	7468	4.274459	GCACTTCCAATGCTCCTATGTTAG	59.726	45.833	0.00	0.00	40.08	2.34
5392	7469	4.274459	CACTTCCAATGCTCCTATGTTAGC	59.726	45.833	0.00	0.00	39.25	3.09
5397	7474	1.191535	TGCTCCTATGTTAGCACGGT	58.808	50.000	0.00	0.00	43.56	4.83
5398	7475	1.553248	TGCTCCTATGTTAGCACGGTT	59.447	47.619	0.00	0.00	43.56	4.44
5399	7476	2.027561	TGCTCCTATGTTAGCACGGTTT	60.028	45.455	0.00	0.00	43.56	3.27
5400	7477	2.608090	GCTCCTATGTTAGCACGGTTTC	59.392	50.000	0.00	0.00	38.63	2.78
5401	7478	3.857052	CTCCTATGTTAGCACGGTTTCA	58.143	45.455	0.00	0.00	0.00	2.69
5402	7479	4.442706	CTCCTATGTTAGCACGGTTTCAT	58.557	43.478	0.00	0.00	0.00	2.57
5403	7480	5.597806	CTCCTATGTTAGCACGGTTTCATA	58.402	41.667	0.00	0.00	0.00	2.15
5404	7481	5.597806	TCCTATGTTAGCACGGTTTCATAG	58.402	41.667	0.00	0.00	36.35	2.23
5405	7482	5.361571	TCCTATGTTAGCACGGTTTCATAGA	59.638	40.000	15.40	5.81	37.80	1.98
5406	7483	6.041637	TCCTATGTTAGCACGGTTTCATAGAT	59.958	38.462	15.40	0.00	37.80	1.98
5407	7484	7.231925	TCCTATGTTAGCACGGTTTCATAGATA	59.768	37.037	15.40	6.61	37.80	1.98
5408	7485	7.870954	CCTATGTTAGCACGGTTTCATAGATAA	59.129	37.037	15.40	0.00	37.80	1.75
5409	7486	9.256477	CTATGTTAGCACGGTTTCATAGATAAA	57.744	33.333	0.00	0.00	37.80	1.40
5410	7487	7.908827	TGTTAGCACGGTTTCATAGATAAAA	57.091	32.000	0.00	0.00	0.00	1.52
5411	7488	8.325421	TGTTAGCACGGTTTCATAGATAAAAA	57.675	30.769	0.00	0.00	0.00	1.94
5443	7520	9.699410	ATGTGACATCCTATTTAATGAGGAAAA	57.301	29.630	9.33	0.00	44.98	2.29
5444	7521	9.177608	TGTGACATCCTATTTAATGAGGAAAAG	57.822	33.333	9.33	6.20	44.98	2.27
5445	7522	8.624776	GTGACATCCTATTTAATGAGGAAAAGG	58.375	37.037	9.33	4.07	44.98	3.11
5446	7523	8.556589	TGACATCCTATTTAATGAGGAAAAGGA	58.443	33.333	9.33	0.00	44.98	3.36
5447	7524	8.986929	ACATCCTATTTAATGAGGAAAAGGAG	57.013	34.615	9.33	1.23	44.98	3.69
5448	7525	8.781951	ACATCCTATTTAATGAGGAAAAGGAGA	58.218	33.333	9.33	0.00	44.98	3.71
5449	7526	9.804977	CATCCTATTTAATGAGGAAAAGGAGAT	57.195	33.333	9.33	0.00	44.98	2.75
5451	7528	9.230477	TCCTATTTAATGAGGAAAAGGAGATCT	57.770	33.333	0.00	0.00	38.96	2.75
5452	7529	9.859152	CCTATTTAATGAGGAAAAGGAGATCTT	57.141	33.333	0.00	0.00	34.46	2.40
5455	7532	8.738645	TTTAATGAGGAAAAGGAGATCTTAGC	57.261	34.615	0.00	0.00	34.78	3.09
5456	7533	6.573712	AATGAGGAAAAGGAGATCTTAGCT	57.426	37.500	0.00	0.00	34.78	3.32
5457	7534	6.573712	ATGAGGAAAAGGAGATCTTAGCTT	57.426	37.500	0.00	0.00	34.78	3.74
5458	7535	5.983540	TGAGGAAAAGGAGATCTTAGCTTC	58.016	41.667	0.00	0.00	34.78	3.86
5459	7536	5.485353	TGAGGAAAAGGAGATCTTAGCTTCA	59.515	40.000	0.00	0.00	34.78	3.02
5460	7537	6.013379	TGAGGAAAAGGAGATCTTAGCTTCAA	60.013	38.462	0.00	0.00	34.78	2.69
5461	7538	6.784031	AGGAAAAGGAGATCTTAGCTTCAAA	58.216	36.000	0.00	0.00	34.78	2.69
5462	7539	7.234355	AGGAAAAGGAGATCTTAGCTTCAAAA	58.766	34.615	0.00	0.00	34.78	2.44
5463	7540	7.175816	AGGAAAAGGAGATCTTAGCTTCAAAAC	59.824	37.037	0.00	0.00	34.78	2.43
5464	7541	6.825944	AAAGGAGATCTTAGCTTCAAAACC	57.174	37.500	0.00	0.00	34.78	3.27
5465	7542	5.505181	AGGAGATCTTAGCTTCAAAACCA	57.495	39.130	0.00	0.00	0.00	3.67
5466	7543	5.880901	AGGAGATCTTAGCTTCAAAACCAA	58.119	37.500	0.00	0.00	0.00	3.67
5467	7544	5.942826	AGGAGATCTTAGCTTCAAAACCAAG	59.057	40.000	0.00	0.00	0.00	3.61
5468	7545	5.940470	GGAGATCTTAGCTTCAAAACCAAGA	59.060	40.000	0.00	0.00	0.00	3.02
5469	7546	6.093357	GGAGATCTTAGCTTCAAAACCAAGAG	59.907	42.308	0.00	0.00	0.00	2.85
5470	7547	6.773638	AGATCTTAGCTTCAAAACCAAGAGA	58.226	36.000	0.00	0.00	0.00	3.10
5471	7548	7.401246	AGATCTTAGCTTCAAAACCAAGAGAT	58.599	34.615	0.00	0.00	0.00	2.75
5472	7549	7.552330	AGATCTTAGCTTCAAAACCAAGAGATC	59.448	37.037	0.00	0.00	37.25	2.75
5473	7550	6.773638	TCTTAGCTTCAAAACCAAGAGATCT	58.226	36.000	0.00	0.00	0.00	2.75
5474	7551	7.227156	TCTTAGCTTCAAAACCAAGAGATCTT	58.773	34.615	0.00	0.00	36.45	2.40
5475	7552	8.375506	TCTTAGCTTCAAAACCAAGAGATCTTA	58.624	33.333	0.00	0.00	34.28	2.10
5476	7553	9.171877	CTTAGCTTCAAAACCAAGAGATCTTAT	57.828	33.333	0.00	0.00	34.28	1.73
5479	7556	8.951243	AGCTTCAAAACCAAGAGATCTTATAAC	58.049	33.333	0.00	0.00	34.28	1.89
5480	7557	8.951243	GCTTCAAAACCAAGAGATCTTATAACT	58.049	33.333	0.00	0.00	34.28	2.24
5503	7580	9.581289	AACTTCTCTATGATATACTAGTGCACT	57.419	33.333	25.12	25.12	0.00	4.40
5504	7581	9.008965	ACTTCTCTATGATATACTAGTGCACTG	57.991	37.037	29.57	20.07	0.00	3.66
5505	7582	9.225436	CTTCTCTATGATATACTAGTGCACTGA	57.775	37.037	29.57	14.54	0.00	3.41
5506	7583	8.785329	TCTCTATGATATACTAGTGCACTGAG	57.215	38.462	29.57	21.97	0.00	3.35
5507	7584	8.598041	TCTCTATGATATACTAGTGCACTGAGA	58.402	37.037	29.57	21.92	0.00	3.27
5508	7585	8.554835	TCTATGATATACTAGTGCACTGAGAC	57.445	38.462	29.57	13.46	0.00	3.36
5509	7586	8.379331	TCTATGATATACTAGTGCACTGAGACT	58.621	37.037	29.57	12.09	0.00	3.24
5510	7587	6.625873	TGATATACTAGTGCACTGAGACTG	57.374	41.667	29.57	13.51	0.00	3.51
5511	7588	3.791973	ATACTAGTGCACTGAGACTGC	57.208	47.619	29.57	0.00	35.03	4.40
5512	7589	1.626686	ACTAGTGCACTGAGACTGCT	58.373	50.000	29.57	1.79	35.53	4.24
5513	7590	2.796557	ACTAGTGCACTGAGACTGCTA	58.203	47.619	29.57	4.73	35.53	3.49
5514	7591	3.360867	ACTAGTGCACTGAGACTGCTAT	58.639	45.455	29.57	0.40	35.53	2.97

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
141	142	3.956317	CACAACGCAGCAGCAGCA	61.956	61.111	10.77	0.00	45.49	4.41
142	143	2.941964	AAACACAACGCAGCAGCAGC	62.942	55.000	0.82	0.00	42.27	5.25
143	144	1.064621	AAACACAACGCAGCAGCAG	59.935	52.632	0.82	0.00	42.27	4.24
213	221	5.865085	TCTACAGGCAAACAGTAAACAGAT	58.135	37.500	0.00	0.00	0.00	2.90
228	236	1.745489	CCGGCCAACTTCTACAGGC	60.745	63.158	2.24	0.00	46.28	4.85
235	243	2.359975	CCACCTCCGGCCAACTTC	60.360	66.667	2.24	0.00	0.00	3.01
339	354	5.723672	ACTAATCCCATACTACATCCACG	57.276	43.478	0.00	0.00	0.00	4.94
352	367	2.200955	TGGCCACATGTACTAATCCCA	58.799	47.619	0.00	0.00	0.00	4.37
353	368	3.508845	ATGGCCACATGTACTAATCCC	57.491	47.619	8.16	0.00	35.57	3.85
354	369	4.943705	CCATATGGCCACATGTACTAATCC	59.056	45.833	22.25	0.00	37.97	3.01
355	370	5.804639	TCCATATGGCCACATGTACTAATC	58.195	41.667	22.25	0.00	37.97	1.75
356	371	5.841267	TCCATATGGCCACATGTACTAAT	57.159	39.130	22.25	0.00	37.97	1.73
358	373	6.888105	CATATCCATATGGCCACATGTACTA	58.112	40.000	22.25	10.84	37.97	1.82
359	374	5.748402	CATATCCATATGGCCACATGTACT	58.252	41.667	22.25	9.03	37.97	2.73
381	421	3.557903	GAGCTGCTGCCAGTTCCCA	62.558	63.158	7.01	0.00	41.75	4.37
382	422	2.749441	GAGCTGCTGCCAGTTCCC	60.749	66.667	7.01	0.00	41.75	3.97
401	441	9.692749	CCGTGTGTACATATATTCTCTACATTT	57.307	33.333	0.00	0.00	0.00	2.32
408	448	5.926542	ACATGCCGTGTGTACATATATTCTC	59.073	40.000	0.00	0.00	40.28	2.87
409	449	5.853936	ACATGCCGTGTGTACATATATTCT	58.146	37.500	0.00	0.00	40.28	2.40
410	450	7.827819	ATACATGCCGTGTGTACATATATTC	57.172	36.000	0.00	0.00	42.24	1.75
412	452	8.063200	ACTATACATGCCGTGTGTACATATAT	57.937	34.615	0.00	0.00	42.24	0.86
413	453	7.457024	ACTATACATGCCGTGTGTACATATA	57.543	36.000	0.00	0.00	42.24	0.86
414	454	6.340962	ACTATACATGCCGTGTGTACATAT	57.659	37.500	0.00	0.00	42.24	1.78
415	455	5.561339	CGACTATACATGCCGTGTGTACATA	60.561	44.000	0.00	0.00	42.24	2.29
417	457	3.487879	CGACTATACATGCCGTGTGTACA	60.488	47.826	0.00	0.00	42.24	2.90
418	458	3.040795	CGACTATACATGCCGTGTGTAC	58.959	50.000	0.00	0.00	42.24	2.90
419	459	2.542205	GCGACTATACATGCCGTGTGTA	60.542	50.000	0.00	0.00	42.24	2.90
448	488	6.675413	ATTATTTCATTCACATCATGGGGG	57.325	37.500	0.00	0.00	0.00	5.40
500	572	2.159170	GCCTGGTTGCACAACTGTAAAA	60.159	45.455	12.87	0.00	40.94	1.52
504	576	1.379710	TGCCTGGTTGCACAACTGT	60.380	52.632	12.87	0.00	40.94	3.55
527	599	0.317519	GCCCGGTGTGTTCGAAAAAG	60.318	55.000	0.00	0.00	0.00	2.27
531	603	2.280524	CTGCCCGGTGTGTTCGAA	60.281	61.111	0.00	0.00	0.00	3.71
532	604	3.096633	AACTGCCCGGTGTGTTCGA	62.097	57.895	0.00	0.00	0.00	3.71
533	605	2.590575	AACTGCCCGGTGTGTTCG	60.591	61.111	0.00	0.00	0.00	3.95
534	606	1.098712	TTCAACTGCCCGGTGTGTTC	61.099	55.000	0.00	0.00	0.00	3.18
536	608	1.525995	CTTCAACTGCCCGGTGTGT	60.526	57.895	0.00	0.00	0.00	3.72
537	609	2.260869	CCTTCAACTGCCCGGTGTG	61.261	63.158	0.00	0.00	0.00	3.82
538	610	2.113139	CCTTCAACTGCCCGGTGT	59.887	61.111	0.00	0.00	0.00	4.16
541	613	4.659172	TGCCCTTCAACTGCCCGG	62.659	66.667	0.00	0.00	0.00	5.73
542	614	1.978617	ATTGCCCTTCAACTGCCCG	60.979	57.895	0.00	0.00	37.53	6.13
543	615	1.593265	CATTGCCCTTCAACTGCCC	59.407	57.895	0.00	0.00	37.53	5.36
560	632	4.651778	AGAAGCTTACCTTTACACATGCA	58.348	39.130	0.00	0.00	32.78	3.96
624	696	5.713792	TCACTCCTCTCTGTTTTACTCTG	57.286	43.478	0.00	0.00	0.00	3.35
625	697	6.926630	AATCACTCCTCTCTGTTTTACTCT	57.073	37.500	0.00	0.00	0.00	3.24
626	698	6.754675	GCTAATCACTCCTCTCTGTTTTACTC	59.245	42.308	0.00	0.00	0.00	2.59
627	699	6.211584	TGCTAATCACTCCTCTCTGTTTTACT	59.788	38.462	0.00	0.00	0.00	2.24
628	700	6.398918	TGCTAATCACTCCTCTCTGTTTTAC	58.601	40.000	0.00	0.00	0.00	2.01
629	701	6.605471	TGCTAATCACTCCTCTCTGTTTTA	57.395	37.500	0.00	0.00	0.00	1.52
630	702	5.489792	TGCTAATCACTCCTCTCTGTTTT	57.510	39.130	0.00	0.00	0.00	2.43
631	703	5.221722	TGTTGCTAATCACTCCTCTCTGTTT	60.222	40.000	0.00	0.00	0.00	2.83
632	704	4.284490	TGTTGCTAATCACTCCTCTCTGTT	59.716	41.667	0.00	0.00	0.00	3.16
633	705	3.834813	TGTTGCTAATCACTCCTCTCTGT	59.165	43.478	0.00	0.00	0.00	3.41
640	712	2.357009	CCATGCTGTTGCTAATCACTCC	59.643	50.000	0.00	0.00	40.48	3.85
667	739	7.983484	GGATTGGATTTGAAAGAACATATGCTT	59.017	33.333	1.58	0.00	0.00	3.91
689	761	3.890756	TCATGTCAGCTTGTTGTTGGATT	59.109	39.130	0.00	0.00	0.00	3.01
690	762	3.489355	TCATGTCAGCTTGTTGTTGGAT	58.511	40.909	0.00	0.00	0.00	3.41
692	764	3.713858	TTCATGTCAGCTTGTTGTTGG	57.286	42.857	0.00	0.00	0.00	3.77
699	771	4.923893	TGTGTCTTTTTCATGTCAGCTTG	58.076	39.130	0.00	0.00	0.00	4.01
712	784	4.532834	TCTAGCCTTGGTTTGTGTCTTTT	58.467	39.130	0.00	0.00	0.00	2.27
743	815	0.249238	GCGTGATTTTGGCCACACAA	60.249	50.000	20.51	8.96	33.13	3.33
744	816	1.106351	AGCGTGATTTTGGCCACACA	61.106	50.000	20.51	9.87	33.13	3.72
748	820	0.611618	ATGGAGCGTGATTTTGGCCA	60.612	50.000	0.00	0.00	0.00	5.36
757	829	0.388520	CTGACGAACATGGAGCGTGA	60.389	55.000	13.20	5.58	38.51	4.35
763	835	3.469008	AGTTTGTCTGACGAACATGGA	57.531	42.857	31.89	2.70	43.33	3.41
783	855	2.820059	ACGCAGAGTGATTCAGACAA	57.180	45.000	0.00	0.00	0.00	3.18
798	870	0.460811	CTAGCTCTGAATGCCACGCA	60.461	55.000	0.00	0.00	44.86	5.24
817	889	5.728351	TCACTTTGTTGTACTGTAACTGC	57.272	39.130	0.00	0.00	0.00	4.40
818	890	7.567571	CAGATCACTTTGTTGTACTGTAACTG	58.432	38.462	0.00	0.00	0.00	3.16
821	893	5.468746	GGCAGATCACTTTGTTGTACTGTAA	59.531	40.000	0.00	0.00	0.00	2.41
822	894	4.994852	GGCAGATCACTTTGTTGTACTGTA	59.005	41.667	0.00	0.00	0.00	2.74
823	895	3.815401	GGCAGATCACTTTGTTGTACTGT	59.185	43.478	0.00	0.00	0.00	3.55
824	896	3.189287	GGGCAGATCACTTTGTTGTACTG	59.811	47.826	0.00	0.00	0.00	2.74
825	897	3.181445	TGGGCAGATCACTTTGTTGTACT	60.181	43.478	0.00	0.00	0.00	2.73
826	898	3.146066	TGGGCAGATCACTTTGTTGTAC	58.854	45.455	0.00	0.00	0.00	2.90
840	917	2.097036	CAGAGCATGATTTTGGGCAGA	58.903	47.619	0.00	0.00	0.00	4.26
855	932	1.291132	GTAGCGGTGGAATTCAGAGC	58.709	55.000	7.93	7.02	0.00	4.09
856	933	1.207089	TGGTAGCGGTGGAATTCAGAG	59.793	52.381	7.93	0.00	0.00	3.35
858	935	1.369625	GTGGTAGCGGTGGAATTCAG	58.630	55.000	7.93	0.00	0.00	3.02
859	936	0.035820	GGTGGTAGCGGTGGAATTCA	60.036	55.000	7.93	0.00	0.00	2.57
860	937	0.035820	TGGTGGTAGCGGTGGAATTC	60.036	55.000	0.00	0.00	0.00	2.17
861	938	0.035439	CTGGTGGTAGCGGTGGAATT	60.035	55.000	0.00	0.00	0.00	2.17
862	939	1.198759	ACTGGTGGTAGCGGTGGAAT	61.199	55.000	0.00	0.00	33.33	3.01
882	962	0.680280	TCCGTCTGCCTGTCTAGTCC	60.680	60.000	0.00	0.00	0.00	3.85
962	1042	2.668212	TTGGAAGAAGGCACCGCG	60.668	61.111	0.00	0.00	0.00	6.46
963	1043	2.335712	CCTTGGAAGAAGGCACCGC	61.336	63.158	0.00	0.00	0.00	5.68
964	1044	1.073199	ACCTTGGAAGAAGGCACCG	59.927	57.895	0.00	0.00	41.10	4.94
965	1045	0.895559	CCACCTTGGAAGAAGGCACC	60.896	60.000	0.00	0.00	40.96	5.01
966	1046	0.110486	TCCACCTTGGAAGAAGGCAC	59.890	55.000	0.00	0.00	45.00	5.01
967	1047	2.550787	TCCACCTTGGAAGAAGGCA	58.449	52.632	0.00	0.00	45.00	4.75
1063	1143	4.003788	CCCGTGAGCGTTGAGGGT	62.004	66.667	0.00	0.00	37.36	4.34
1097	1177	1.803289	GAGCTGGGCGATTTGGTTC	59.197	57.895	0.00	0.00	0.00	3.62
1098	1178	2.040544	CGAGCTGGGCGATTTGGTT	61.041	57.895	0.00	0.00	0.00	3.67
1132	1217	3.093057	GTGAGGTAGATGGACAGTGAGT	58.907	50.000	0.00	0.00	0.00	3.41
1731	1816	2.182030	GAGAGTGCGTTCCCGGAG	59.818	66.667	0.73	0.00	34.06	4.63
1734	1819	4.796231	CCGGAGAGTGCGTTCCCG	62.796	72.222	0.00	0.00	39.85	5.14
1845	1930	1.070786	GAGGTGGAGCAACAACGGA	59.929	57.895	0.00	0.00	31.99	4.69
1849	1934	0.550914	AGGTTGAGGTGGAGCAACAA	59.449	50.000	0.00	0.00	44.59	2.83
1941	2026	2.293122	CAGGCGGTTTCTTGACAAATCA	59.707	45.455	0.00	0.00	0.00	2.57
1944	2029	1.673920	GACAGGCGGTTTCTTGACAAA	59.326	47.619	0.00	0.00	0.00	2.83
1945	2030	1.305201	GACAGGCGGTTTCTTGACAA	58.695	50.000	0.00	0.00	0.00	3.18
1991	2076	1.571460	GTCTTGAGGTTGTGCAGCG	59.429	57.895	0.00	0.00	0.00	5.18
2103	2188	4.856607	GGGAGCTCGGCGTCGAAG	62.857	72.222	15.23	9.08	45.47	3.79
2379	2464	2.360852	CTGAGCTGGTTGCCCCTG	60.361	66.667	0.00	0.00	44.23	4.45
2416	2501	2.181021	GAGCCCGACGTCGAACAT	59.819	61.111	37.65	20.41	43.02	2.71
2433	2518	1.869574	CGACATGTCCAGCGTCTCG	60.870	63.158	20.03	1.77	0.00	4.04
2487	2572	4.459089	GTCTCGGCCAGCCTGGTC	62.459	72.222	13.35	9.40	40.46	4.02
2520	2605	2.604686	AGCTGGTTGCCGGAGAGA	60.605	61.111	5.05	0.00	44.23	3.10
2523	2608	2.743928	GTGAGCTGGTTGCCGGAG	60.744	66.667	5.05	0.00	44.23	4.63
2580	2665	1.516423	GGAGAGGTTGAGGTACCGC	59.484	63.158	8.97	8.97	43.21	5.68
2583	2668	1.255667	TGCGGGAGAGGTTGAGGTAC	61.256	60.000	0.00	0.00	0.00	3.34
2793	2878	8.804912	TTAAGAAGTCTTACAGTAGGTAGAGG	57.195	38.462	0.14	0.00	38.09	3.69
2837	2926	8.348507	TCACCCAAATTTTGTGAAATTATTTGC	58.651	29.630	14.80	0.00	42.97	3.68
2838	2927	9.662545	GTCACCCAAATTTTGTGAAATTATTTG	57.337	29.630	17.52	0.00	42.97	2.32
2843	2932	7.693969	TTTGTCACCCAAATTTTGTGAAATT	57.306	28.000	17.52	0.00	45.06	1.82
2844	2933	7.693969	TTTTGTCACCCAAATTTTGTGAAAT	57.306	28.000	17.52	0.00	42.45	2.17
2845	2934	7.693969	ATTTTGTCACCCAAATTTTGTGAAA	57.306	28.000	17.52	12.13	42.45	2.69
2846	2935	7.693969	AATTTTGTCACCCAAATTTTGTGAA	57.306	28.000	17.52	6.91	42.45	3.18
2847	2936	7.533426	CAAATTTTGTCACCCAAATTTTGTGA	58.467	30.769	13.66	13.66	46.64	3.58
2848	2937	7.737525	CAAATTTTGTCACCCAAATTTTGTG	57.262	32.000	18.04	10.14	46.64	3.33
2851	2940	8.747471	ACAATCAAATTTTGTCACCCAAATTTT	58.253	25.926	8.89	0.00	42.75	1.82
2852	2941	8.291191	ACAATCAAATTTTGTCACCCAAATTT	57.709	26.923	8.89	2.87	42.45	1.82
2853	2942	7.878547	ACAATCAAATTTTGTCACCCAAATT	57.121	28.000	8.89	0.00	42.45	1.82
2854	2943	7.878547	AACAATCAAATTTTGTCACCCAAAT	57.121	28.000	8.89	0.00	42.45	2.32
2966	3055	0.818040	GGTTGTTGTTCTCCAGCCGT	60.818	55.000	0.00	0.00	0.00	5.68
2976	3065	2.184167	CGCCGGTGAGGTTGTTGTT	61.184	57.895	10.20	0.00	43.70	2.83
3347	5360	4.377708	AGCAGCGCGATCACCACA	62.378	61.111	12.10	0.00	0.00	4.17
3608	5621	3.384532	GCCCGGTAAGTCGTCCCA	61.385	66.667	0.00	0.00	0.00	4.37
3740	5753	1.651240	CCTTGAGCGGCATCAGGTTG	61.651	60.000	1.45	0.00	0.00	3.77
3920	5939	0.389948	GGAACGACTGGTGCAGGTAG	60.390	60.000	0.00	0.00	35.51	3.18
4166	6187	1.606350	CGTCGCACTTCTCGTTCACC	61.606	60.000	0.00	0.00	0.00	4.02
4235	6256	2.056815	GTCCTCCCCGTACTCCACC	61.057	68.421	0.00	0.00	0.00	4.61
4271	6292	4.626081	GCCACACGCACCTGGTCT	62.626	66.667	0.00	0.00	37.47	3.85
4445	6469	1.819229	CAGGATCTGGACCACCTCG	59.181	63.158	0.00	0.00	37.04	4.63
4508	6532	4.437495	CGTCGTACTTTAACGTGTCAGAAA	59.563	41.667	0.00	0.00	43.31	2.52
4520	6544	2.153645	TGCTCTGGTCGTCGTACTTTA	58.846	47.619	0.00	0.00	0.00	1.85
4537	6561	1.133945	TGGATCTCGTCTAGCTCTGCT	60.134	52.381	0.00	0.00	43.41	4.24
4538	6562	1.313772	TGGATCTCGTCTAGCTCTGC	58.686	55.000	0.00	0.00	0.00	4.26
4539	6563	3.567585	TCAATGGATCTCGTCTAGCTCTG	59.432	47.826	0.00	0.00	0.00	3.35
4540	6564	3.826524	TCAATGGATCTCGTCTAGCTCT	58.173	45.455	0.00	0.00	0.00	4.09
4541	6565	4.782019	ATCAATGGATCTCGTCTAGCTC	57.218	45.455	0.00	0.00	0.00	4.09
4542	6566	4.880759	CAATCAATGGATCTCGTCTAGCT	58.119	43.478	0.00	0.00	31.88	3.32
4565	6599	0.179111	TAGTACGTCCAGCTGCATGC	60.179	55.000	11.82	11.82	43.29	4.06
4582	6616	0.179059	TGCATGGCCATGGTACGTAG	60.179	55.000	39.72	18.02	39.16	3.51
4583	6617	0.472044	ATGCATGGCCATGGTACGTA	59.528	50.000	39.72	19.02	39.16	3.57
4584	6618	1.102809	CATGCATGGCCATGGTACGT	61.103	55.000	39.72	24.86	39.08	3.57
4585	6619	1.655885	CATGCATGGCCATGGTACG	59.344	57.895	39.72	20.15	39.08	3.67
4609	6643	1.399855	CGTACTACTCGCGGATCCATG	60.400	57.143	13.41	2.91	0.00	3.66
4610	6644	0.873054	CGTACTACTCGCGGATCCAT	59.127	55.000	13.41	0.00	0.00	3.41
4611	6645	0.462581	ACGTACTACTCGCGGATCCA	60.463	55.000	13.41	0.00	0.00	3.41
4612	6646	1.193426	GTACGTACTACTCGCGGATCC	59.807	57.143	18.47	0.00	0.00	3.36
4613	6647	1.136775	CGTACGTACTACTCGCGGATC	60.137	57.143	22.55	0.00	0.00	3.36
4647	6681	4.080695	ACACACAGTGGAGAGCATCAATAT	60.081	41.667	5.31	0.00	37.94	1.28
4648	6682	3.261643	ACACACAGTGGAGAGCATCAATA	59.738	43.478	5.31	0.00	37.94	1.90
4649	6683	2.039480	ACACACAGTGGAGAGCATCAAT	59.961	45.455	5.31	0.00	37.94	2.57
4650	6684	1.417517	ACACACAGTGGAGAGCATCAA	59.582	47.619	5.31	0.00	37.94	2.57
4651	6685	1.051008	ACACACAGTGGAGAGCATCA	58.949	50.000	5.31	0.00	37.94	3.07
4652	6686	1.436600	CACACACAGTGGAGAGCATC	58.563	55.000	5.31	0.00	44.69	3.91
4653	6687	3.620061	CACACACAGTGGAGAGCAT	57.380	52.632	5.31	0.00	44.69	3.79
4663	6697	0.297525	CGTGACACGAACACACACAG	59.702	55.000	23.39	0.00	46.05	3.66
4668	6702	1.127029	CAAACACGTGACACGAACACA	59.873	47.619	33.12	0.00	46.05	3.72
4756	6797	6.073602	CCAAAAGCACAATAAGAGAAAAAGGC	60.074	38.462	0.00	0.00	0.00	4.35
4759	6800	6.843069	GCCAAAAGCACAATAAGAGAAAAA	57.157	33.333	0.00	0.00	42.97	1.94
4774	6815	0.946528	CCAAAAGCCAAGCCAAAAGC	59.053	50.000	0.00	0.00	44.25	3.51
4775	6816	2.212652	GTCCAAAAGCCAAGCCAAAAG	58.787	47.619	0.00	0.00	0.00	2.27
4776	6817	1.472376	CGTCCAAAAGCCAAGCCAAAA	60.472	47.619	0.00	0.00	0.00	2.44
4777	6818	0.103937	CGTCCAAAAGCCAAGCCAAA	59.896	50.000	0.00	0.00	0.00	3.28
4778	6819	1.040339	ACGTCCAAAAGCCAAGCCAA	61.040	50.000	0.00	0.00	0.00	4.52
4779	6820	1.452145	GACGTCCAAAAGCCAAGCCA	61.452	55.000	3.51	0.00	0.00	4.75
4780	6821	1.285950	GACGTCCAAAAGCCAAGCC	59.714	57.895	3.51	0.00	0.00	4.35
4781	6822	0.383949	TTGACGTCCAAAAGCCAAGC	59.616	50.000	14.12	0.00	0.00	4.01
4782	6823	2.861462	TTTGACGTCCAAAAGCCAAG	57.139	45.000	14.12	0.00	41.43	3.61
4795	6836	4.092529	CCTCTCATCACTCACATTTTGACG	59.907	45.833	0.00	0.00	0.00	4.35
4870	6912	1.444553	CAGCTCGACCGGAGACAAC	60.445	63.158	9.46	0.00	46.23	3.32
4876	6918	3.733960	CGTGACAGCTCGACCGGA	61.734	66.667	9.46	0.00	33.14	5.14
4890	6932	1.216941	ACGTACGCCAACTTTCCGTG	61.217	55.000	16.72	0.00	36.51	4.94
4895	6937	0.028374	GCAACACGTACGCCAACTTT	59.972	50.000	16.72	0.00	0.00	2.66
4904	6946	1.002900	ACAGTGCATTGCAACACGTAC	60.003	47.619	13.94	3.26	41.47	3.67
4914	6956	2.174107	CGGACGCACAGTGCATTG	59.826	61.111	25.19	11.56	45.36	2.82
4924	6966	4.367023	GTAGTGGGCACGGACGCA	62.367	66.667	0.00	0.00	36.20	5.24
4925	6967	4.367023	TGTAGTGGGCACGGACGC	62.367	66.667	0.00	0.00	36.20	5.19
4927	6969	2.434359	GCTGTAGTGGGCACGGAC	60.434	66.667	0.00	0.00	36.20	4.79
4928	6970	4.063967	CGCTGTAGTGGGCACGGA	62.064	66.667	0.00	0.00	36.20	4.69
4933	6975	2.047274	TTCTGCGCTGTAGTGGGC	60.047	61.111	9.73	0.00	44.63	5.36
4934	6976	1.005037	TGTTCTGCGCTGTAGTGGG	60.005	57.895	9.73	0.00	0.00	4.61
4935	6977	1.291877	GGTGTTCTGCGCTGTAGTGG	61.292	60.000	9.73	0.00	0.00	4.00
4936	6978	1.617755	CGGTGTTCTGCGCTGTAGTG	61.618	60.000	9.73	0.00	0.00	2.74
4937	6979	1.372997	CGGTGTTCTGCGCTGTAGT	60.373	57.895	9.73	0.00	0.00	2.73
4938	6980	0.944311	AACGGTGTTCTGCGCTGTAG	60.944	55.000	9.73	0.00	45.64	2.74
4939	6981	0.314618	TAACGGTGTTCTGCGCTGTA	59.685	50.000	9.73	0.00	45.64	2.74
4941	6983	0.370273	GATAACGGTGTTCTGCGCTG	59.630	55.000	9.73	8.88	39.76	5.18
4942	6984	0.246635	AGATAACGGTGTTCTGCGCT	59.753	50.000	9.73	0.00	0.00	5.92
4943	6985	0.645868	GAGATAACGGTGTTCTGCGC	59.354	55.000	0.00	0.00	0.00	6.09
4944	6986	2.279582	AGAGATAACGGTGTTCTGCG	57.720	50.000	0.00	0.00	0.00	5.18
4945	6987	3.851098	AGAAGAGATAACGGTGTTCTGC	58.149	45.455	0.00	0.00	0.00	4.26
4946	6988	5.060662	TGAGAAGAGATAACGGTGTTCTG	57.939	43.478	0.00	0.00	0.00	3.02
4947	6989	5.654650	AGATGAGAAGAGATAACGGTGTTCT	59.345	40.000	0.00	0.00	0.00	3.01
4948	6990	5.746245	CAGATGAGAAGAGATAACGGTGTTC	59.254	44.000	0.00	0.00	0.00	3.18
4975	7017	6.033091	GTCAACAAGGAAACAACAAAGTAACG	59.967	38.462	0.00	0.00	0.00	3.18
4987	7029	3.438360	CAGCAACAGTCAACAAGGAAAC	58.562	45.455	0.00	0.00	0.00	2.78
4988	7030	2.159254	GCAGCAACAGTCAACAAGGAAA	60.159	45.455	0.00	0.00	0.00	3.13
5018	7060	3.976758	GCACTCACATGCAGCTCA	58.023	55.556	0.00	0.00	45.39	4.26
5039	7081	0.179205	GAGTTCACGCATGCTCTTGC	60.179	55.000	17.13	3.28	39.29	4.01
5093	7143	3.299977	GGGCCCCAAACGGTGAAC	61.300	66.667	12.23	0.00	0.00	3.18
5138	7213	0.541863	CCAAGCCTCCTGTCCGTAAT	59.458	55.000	0.00	0.00	0.00	1.89
5142	7217	2.826777	AATGCCAAGCCTCCTGTCCG	62.827	60.000	0.00	0.00	0.00	4.79
5147	7222	0.832983	TGCAAAATGCCAAGCCTCCT	60.833	50.000	0.00	0.00	44.23	3.69
5167	7242	7.376615	GGTAATCGAAGGTACTATAGCAATGT	58.623	38.462	0.00	0.00	38.49	2.71
5179	7254	1.820519	AGTGCACGGTAATCGAAGGTA	59.179	47.619	12.01	0.00	42.43	3.08
5186	7261	3.786635	AGAGAATCAGTGCACGGTAATC	58.213	45.455	16.70	12.65	37.82	1.75
5190	7265	1.203523	GAGAGAGAATCAGTGCACGGT	59.796	52.381	16.70	2.69	37.82	4.83
5218	7295	1.205055	TATACCCCCATGAACACGCA	58.795	50.000	0.00	0.00	0.00	5.24
5219	7296	2.561478	ATATACCCCCATGAACACGC	57.439	50.000	0.00	0.00	0.00	5.34
5221	7298	4.986054	TGGTATATACCCCCATGAACAC	57.014	45.455	25.90	0.70	45.87	3.32
5229	7306	3.518303	GGAGACACATGGTATATACCCCC	59.482	52.174	25.90	11.77	45.87	5.40
5237	7314	3.308035	TCGGTAGGAGACACATGGTAT	57.692	47.619	0.00	0.00	0.00	2.73
5238	7315	2.812836	TCGGTAGGAGACACATGGTA	57.187	50.000	0.00	0.00	0.00	3.25
5239	7316	1.825474	CTTCGGTAGGAGACACATGGT	59.175	52.381	0.00	0.00	0.00	3.55
5240	7317	2.100197	TCTTCGGTAGGAGACACATGG	58.900	52.381	0.00	0.00	0.00	3.66
5241	7318	5.515797	TTATCTTCGGTAGGAGACACATG	57.484	43.478	0.00	0.00	0.00	3.21
5242	7319	6.732896	AATTATCTTCGGTAGGAGACACAT	57.267	37.500	0.00	0.00	0.00	3.21
5243	7320	6.832384	ACTAATTATCTTCGGTAGGAGACACA	59.168	38.462	0.00	0.00	0.00	3.72
5244	7321	7.274603	ACTAATTATCTTCGGTAGGAGACAC	57.725	40.000	0.00	0.00	0.00	3.67
5245	7322	7.893124	AACTAATTATCTTCGGTAGGAGACA	57.107	36.000	0.00	0.00	0.00	3.41
5246	7323	9.896263	CTTAACTAATTATCTTCGGTAGGAGAC	57.104	37.037	0.00	0.00	0.00	3.36
5247	7324	9.075678	CCTTAACTAATTATCTTCGGTAGGAGA	57.924	37.037	0.00	0.00	0.00	3.71
5248	7325	8.858094	ACCTTAACTAATTATCTTCGGTAGGAG	58.142	37.037	0.00	0.00	0.00	3.69
5249	7326	8.773033	ACCTTAACTAATTATCTTCGGTAGGA	57.227	34.615	0.00	0.00	0.00	2.94
5250	7327	8.087136	GGACCTTAACTAATTATCTTCGGTAGG	58.913	40.741	0.00	0.00	0.00	3.18
5251	7328	8.087136	GGGACCTTAACTAATTATCTTCGGTAG	58.913	40.741	0.00	0.00	0.00	3.18
5252	7329	7.255590	CGGGACCTTAACTAATTATCTTCGGTA	60.256	40.741	0.00	0.00	0.00	4.02
5253	7330	6.462067	CGGGACCTTAACTAATTATCTTCGGT	60.462	42.308	0.00	0.00	0.00	4.69
5254	7331	5.924825	CGGGACCTTAACTAATTATCTTCGG	59.075	44.000	0.00	0.00	0.00	4.30
5255	7332	6.640092	GTCGGGACCTTAACTAATTATCTTCG	59.360	42.308	0.00	0.00	0.00	3.79
5256	7333	7.437565	GTGTCGGGACCTTAACTAATTATCTTC	59.562	40.741	0.00	0.00	0.00	2.87
5257	7334	7.093201	TGTGTCGGGACCTTAACTAATTATCTT	60.093	37.037	0.00	0.00	0.00	2.40
5258	7335	6.381994	TGTGTCGGGACCTTAACTAATTATCT	59.618	38.462	0.00	0.00	0.00	1.98
5259	7336	6.576185	TGTGTCGGGACCTTAACTAATTATC	58.424	40.000	0.00	0.00	0.00	1.75
5260	7337	6.549433	TGTGTCGGGACCTTAACTAATTAT	57.451	37.500	0.00	0.00	0.00	1.28
5261	7338	5.999205	TGTGTCGGGACCTTAACTAATTA	57.001	39.130	0.00	0.00	0.00	1.40
5262	7339	4.895668	TGTGTCGGGACCTTAACTAATT	57.104	40.909	0.00	0.00	0.00	1.40
5263	7340	4.895668	TTGTGTCGGGACCTTAACTAAT	57.104	40.909	0.00	0.00	0.00	1.73
5264	7341	4.040706	ACATTGTGTCGGGACCTTAACTAA	59.959	41.667	0.00	0.00	0.00	2.24
5265	7342	3.579586	ACATTGTGTCGGGACCTTAACTA	59.420	43.478	0.00	0.00	0.00	2.24
5266	7343	2.370849	ACATTGTGTCGGGACCTTAACT	59.629	45.455	0.00	0.00	0.00	2.24
5267	7344	2.482721	CACATTGTGTCGGGACCTTAAC	59.517	50.000	8.69	0.00	0.00	2.01
5268	7345	2.105134	ACACATTGTGTCGGGACCTTAA	59.895	45.455	16.62	0.00	43.92	1.85
5269	7346	1.695242	ACACATTGTGTCGGGACCTTA	59.305	47.619	16.62	0.00	43.92	2.69
5270	7347	0.472471	ACACATTGTGTCGGGACCTT	59.528	50.000	16.62	0.00	43.92	3.50
5271	7348	2.142220	ACACATTGTGTCGGGACCT	58.858	52.632	16.62	0.00	43.92	3.85
5272	7349	4.792087	ACACATTGTGTCGGGACC	57.208	55.556	16.62	0.00	43.92	4.46
5280	7357	4.530094	AACAGTAACACGACACATTGTG	57.470	40.909	15.18	15.18	44.80	3.33
5281	7358	5.554822	AAAACAGTAACACGACACATTGT	57.445	34.783	0.00	0.00	0.00	2.71
5282	7359	6.255215	AGAAAAACAGTAACACGACACATTG	58.745	36.000	0.00	0.00	0.00	2.82
5283	7360	6.431198	AGAAAAACAGTAACACGACACATT	57.569	33.333	0.00	0.00	0.00	2.71
5284	7361	6.255215	CAAGAAAAACAGTAACACGACACAT	58.745	36.000	0.00	0.00	0.00	3.21
5285	7362	5.391097	CCAAGAAAAACAGTAACACGACACA	60.391	40.000	0.00	0.00	0.00	3.72
5286	7363	5.025826	CCAAGAAAAACAGTAACACGACAC	58.974	41.667	0.00	0.00	0.00	3.67
5287	7364	4.437659	GCCAAGAAAAACAGTAACACGACA	60.438	41.667	0.00	0.00	0.00	4.35
5288	7365	4.033019	GCCAAGAAAAACAGTAACACGAC	58.967	43.478	0.00	0.00	0.00	4.34
5289	7366	3.242478	CGCCAAGAAAAACAGTAACACGA	60.242	43.478	0.00	0.00	0.00	4.35
5290	7367	3.033185	CGCCAAGAAAAACAGTAACACG	58.967	45.455	0.00	0.00	0.00	4.49
5291	7368	4.023739	ACGCCAAGAAAAACAGTAACAC	57.976	40.909	0.00	0.00	0.00	3.32
5292	7369	4.705337	AACGCCAAGAAAAACAGTAACA	57.295	36.364	0.00	0.00	0.00	2.41
5293	7370	7.688478	ATAAAACGCCAAGAAAAACAGTAAC	57.312	32.000	0.00	0.00	0.00	2.50
5294	7371	8.705048	AAATAAAACGCCAAGAAAAACAGTAA	57.295	26.923	0.00	0.00	0.00	2.24
5295	7372	8.596380	CAAAATAAAACGCCAAGAAAAACAGTA	58.404	29.630	0.00	0.00	0.00	2.74
5296	7373	7.460296	CAAAATAAAACGCCAAGAAAAACAGT	58.540	30.769	0.00	0.00	0.00	3.55
5297	7374	6.410625	GCAAAATAAAACGCCAAGAAAAACAG	59.589	34.615	0.00	0.00	0.00	3.16
5298	7375	6.092807	AGCAAAATAAAACGCCAAGAAAAACA	59.907	30.769	0.00	0.00	0.00	2.83
5299	7376	6.482835	AGCAAAATAAAACGCCAAGAAAAAC	58.517	32.000	0.00	0.00	0.00	2.43
5300	7377	6.670077	AGCAAAATAAAACGCCAAGAAAAA	57.330	29.167	0.00	0.00	0.00	1.94
5301	7378	6.670077	AAGCAAAATAAAACGCCAAGAAAA	57.330	29.167	0.00	0.00	0.00	2.29
5302	7379	6.670077	AAAGCAAAATAAAACGCCAAGAAA	57.330	29.167	0.00	0.00	0.00	2.52
5303	7380	6.457528	CCAAAAGCAAAATAAAACGCCAAGAA	60.458	34.615	0.00	0.00	0.00	2.52
5304	7381	5.007136	CCAAAAGCAAAATAAAACGCCAAGA	59.993	36.000	0.00	0.00	0.00	3.02
5305	7382	5.007136	TCCAAAAGCAAAATAAAACGCCAAG	59.993	36.000	0.00	0.00	0.00	3.61
5306	7383	4.876107	TCCAAAAGCAAAATAAAACGCCAA	59.124	33.333	0.00	0.00	0.00	4.52
5307	7384	4.442706	TCCAAAAGCAAAATAAAACGCCA	58.557	34.783	0.00	0.00	0.00	5.69
5308	7385	5.049749	ACATCCAAAAGCAAAATAAAACGCC	60.050	36.000	0.00	0.00	0.00	5.68
5309	7386	5.984627	ACATCCAAAAGCAAAATAAAACGC	58.015	33.333	0.00	0.00	0.00	4.84
5310	7387	6.143118	TCGACATCCAAAAGCAAAATAAAACG	59.857	34.615	0.00	0.00	0.00	3.60
5311	7388	7.401484	TCGACATCCAAAAGCAAAATAAAAC	57.599	32.000	0.00	0.00	0.00	2.43
5312	7389	8.425577	TTTCGACATCCAAAAGCAAAATAAAA	57.574	26.923	0.00	0.00	0.00	1.52
5313	7390	8.494347	CATTTCGACATCCAAAAGCAAAATAAA	58.506	29.630	0.00	0.00	0.00	1.40
5314	7391	7.655328	ACATTTCGACATCCAAAAGCAAAATAA	59.345	29.630	0.00	0.00	0.00	1.40
5315	7392	7.116090	CACATTTCGACATCCAAAAGCAAAATA	59.884	33.333	0.00	0.00	0.00	1.40
5316	7393	5.990996	ACATTTCGACATCCAAAAGCAAAAT	59.009	32.000	0.00	0.00	0.00	1.82
5317	7394	5.233902	CACATTTCGACATCCAAAAGCAAAA	59.766	36.000	0.00	0.00	0.00	2.44
5318	7395	4.744137	CACATTTCGACATCCAAAAGCAAA	59.256	37.500	0.00	0.00	0.00	3.68
5319	7396	4.037327	TCACATTTCGACATCCAAAAGCAA	59.963	37.500	0.00	0.00	0.00	3.91
5320	7397	3.567585	TCACATTTCGACATCCAAAAGCA	59.432	39.130	0.00	0.00	0.00	3.91
5321	7398	4.159377	TCACATTTCGACATCCAAAAGC	57.841	40.909	0.00	0.00	0.00	3.51
5322	7399	5.801947	GGAATCACATTTCGACATCCAAAAG	59.198	40.000	0.00	0.00	0.00	2.27
5323	7400	5.476599	AGGAATCACATTTCGACATCCAAAA	59.523	36.000	0.00	0.00	0.00	2.44
5324	7401	5.009631	AGGAATCACATTTCGACATCCAAA	58.990	37.500	0.00	0.00	0.00	3.28
5325	7402	4.395854	CAGGAATCACATTTCGACATCCAA	59.604	41.667	0.00	0.00	0.00	3.53
5326	7403	3.940852	CAGGAATCACATTTCGACATCCA	59.059	43.478	0.00	0.00	0.00	3.41
5327	7404	4.034510	GTCAGGAATCACATTTCGACATCC	59.965	45.833	0.00	0.00	0.00	3.51
5328	7405	4.259970	CGTCAGGAATCACATTTCGACATC	60.260	45.833	0.00	0.00	0.00	3.06
5329	7406	3.618594	CGTCAGGAATCACATTTCGACAT	59.381	43.478	0.00	0.00	0.00	3.06
5330	7407	2.993220	CGTCAGGAATCACATTTCGACA	59.007	45.455	0.00	0.00	0.00	4.35
5331	7408	2.222819	GCGTCAGGAATCACATTTCGAC	60.223	50.000	0.00	0.00	0.00	4.20
5332	7409	1.999735	GCGTCAGGAATCACATTTCGA	59.000	47.619	0.00	0.00	0.00	3.71
5333	7410	1.731709	TGCGTCAGGAATCACATTTCG	59.268	47.619	0.00	0.00	0.00	3.46
5334	7411	4.095483	AGAATGCGTCAGGAATCACATTTC	59.905	41.667	0.00	0.00	0.00	2.17
5335	7412	4.012374	AGAATGCGTCAGGAATCACATTT	58.988	39.130	0.00	0.00	0.00	2.32
5336	7413	3.614092	AGAATGCGTCAGGAATCACATT	58.386	40.909	0.00	0.00	0.00	2.71
5337	7414	3.118482	AGAGAATGCGTCAGGAATCACAT	60.118	43.478	0.00	0.00	0.00	3.21
5338	7415	2.234661	AGAGAATGCGTCAGGAATCACA	59.765	45.455	0.00	0.00	0.00	3.58
5339	7416	2.898705	AGAGAATGCGTCAGGAATCAC	58.101	47.619	0.00	0.00	0.00	3.06
5340	7417	3.616956	AAGAGAATGCGTCAGGAATCA	57.383	42.857	0.00	0.00	0.00	2.57
5341	7418	3.686726	ACAAAGAGAATGCGTCAGGAATC	59.313	43.478	0.00	0.00	0.00	2.52
5342	7419	3.438087	CACAAAGAGAATGCGTCAGGAAT	59.562	43.478	0.00	0.00	0.00	3.01
5343	7420	2.807967	CACAAAGAGAATGCGTCAGGAA	59.192	45.455	0.00	0.00	0.00	3.36
5344	7421	2.037121	TCACAAAGAGAATGCGTCAGGA	59.963	45.455	0.00	0.00	0.00	3.86
5345	7422	2.416747	TCACAAAGAGAATGCGTCAGG	58.583	47.619	0.00	0.00	0.00	3.86
5353	7430	6.282148	TGGAAGTGCCCTCACAAAGAGAAT	62.282	45.833	0.00	0.00	45.49	2.40
5354	7431	5.026564	TGGAAGTGCCCTCACAAAGAGAA	62.027	47.826	0.00	0.00	45.49	2.87
5355	7432	3.555606	TGGAAGTGCCCTCACAAAGAGA	61.556	50.000	0.00	0.00	45.49	3.10
5356	7433	1.202806	TGGAAGTGCCCTCACAAAGAG	60.203	52.381	0.00	0.00	45.49	2.85
5357	7434	0.843309	TGGAAGTGCCCTCACAAAGA	59.157	50.000	0.00	0.00	45.49	2.52
5358	7435	1.691196	TTGGAAGTGCCCTCACAAAG	58.309	50.000	0.00	0.00	45.49	2.77
5359	7436	1.962807	CATTGGAAGTGCCCTCACAAA	59.037	47.619	0.00	0.00	45.49	2.83
5360	7437	1.619654	CATTGGAAGTGCCCTCACAA	58.380	50.000	0.00	0.00	45.49	3.33
5361	7438	0.895100	GCATTGGAAGTGCCCTCACA	60.895	55.000	0.00	0.00	45.49	3.58
5362	7439	0.610232	AGCATTGGAAGTGCCCTCAC	60.610	55.000	0.00	0.00	43.50	3.51
5363	7440	0.322816	GAGCATTGGAAGTGCCCTCA	60.323	55.000	0.00	0.00	43.50	3.86
5364	7441	1.034292	GGAGCATTGGAAGTGCCCTC	61.034	60.000	0.00	0.00	43.50	4.30
5365	7442	1.000396	GGAGCATTGGAAGTGCCCT	60.000	57.895	0.00	0.00	43.50	5.19
5366	7443	0.255890	TAGGAGCATTGGAAGTGCCC	59.744	55.000	0.00	0.00	43.50	5.36
5367	7444	1.952296	CATAGGAGCATTGGAAGTGCC	59.048	52.381	0.00	0.00	43.50	5.01
5368	7445	2.648059	ACATAGGAGCATTGGAAGTGC	58.352	47.619	0.00	0.00	42.81	4.40
5369	7446	4.274459	GCTAACATAGGAGCATTGGAAGTG	59.726	45.833	0.00	0.00	38.62	3.16
5370	7447	4.080356	TGCTAACATAGGAGCATTGGAAGT	60.080	41.667	0.00	0.00	43.64	3.01
5371	7448	4.454678	TGCTAACATAGGAGCATTGGAAG	58.545	43.478	0.00	0.00	43.64	3.46
5372	7449	4.502105	TGCTAACATAGGAGCATTGGAA	57.498	40.909	0.00	0.00	43.64	3.53
5378	7455	1.191535	ACCGTGCTAACATAGGAGCA	58.808	50.000	0.00	0.00	46.24	4.26
5379	7456	2.311124	AACCGTGCTAACATAGGAGC	57.689	50.000	0.00	0.00	39.25	4.70
5380	7457	3.857052	TGAAACCGTGCTAACATAGGAG	58.143	45.455	0.00	0.00	32.63	3.69
5381	7458	3.965379	TGAAACCGTGCTAACATAGGA	57.035	42.857	0.00	0.00	32.63	2.94
5382	7459	5.597806	TCTATGAAACCGTGCTAACATAGG	58.402	41.667	0.00	0.00	38.25	2.57
5383	7460	8.812147	TTATCTATGAAACCGTGCTAACATAG	57.188	34.615	0.00	0.00	38.72	2.23
5384	7461	9.602568	TTTTATCTATGAAACCGTGCTAACATA	57.397	29.630	0.00	0.00	0.00	2.29
5385	7462	8.500753	TTTTATCTATGAAACCGTGCTAACAT	57.499	30.769	0.00	0.00	0.00	2.71
5386	7463	7.908827	TTTTATCTATGAAACCGTGCTAACA	57.091	32.000	0.00	0.00	0.00	2.41
5417	7494	9.699410	TTTTCCTCATTAAATAGGATGTCACAT	57.301	29.630	9.35	0.00	41.50	3.21
5418	7495	9.177608	CTTTTCCTCATTAAATAGGATGTCACA	57.822	33.333	9.35	0.00	41.50	3.58
5419	7496	8.624776	CCTTTTCCTCATTAAATAGGATGTCAC	58.375	37.037	9.35	0.00	41.50	3.67
5420	7497	8.556589	TCCTTTTCCTCATTAAATAGGATGTCA	58.443	33.333	9.35	0.00	41.50	3.58
5421	7498	8.980481	TCCTTTTCCTCATTAAATAGGATGTC	57.020	34.615	9.35	0.00	41.50	3.06
5422	7499	8.781951	TCTCCTTTTCCTCATTAAATAGGATGT	58.218	33.333	9.35	0.00	41.50	3.06
5423	7500	9.804977	ATCTCCTTTTCCTCATTAAATAGGATG	57.195	33.333	9.35	4.69	41.50	3.51
5425	7502	9.230477	AGATCTCCTTTTCCTCATTAAATAGGA	57.770	33.333	5.30	5.30	40.18	2.94
5426	7503	9.859152	AAGATCTCCTTTTCCTCATTAAATAGG	57.141	33.333	0.00	0.91	0.00	2.57
5429	7506	9.348476	GCTAAGATCTCCTTTTCCTCATTAAAT	57.652	33.333	0.00	0.00	36.34	1.40
5430	7507	8.552296	AGCTAAGATCTCCTTTTCCTCATTAAA	58.448	33.333	0.00	0.00	36.34	1.52
5431	7508	8.095452	AGCTAAGATCTCCTTTTCCTCATTAA	57.905	34.615	0.00	0.00	36.34	1.40
5432	7509	7.682787	AGCTAAGATCTCCTTTTCCTCATTA	57.317	36.000	0.00	0.00	36.34	1.90
5433	7510	6.573712	AGCTAAGATCTCCTTTTCCTCATT	57.426	37.500	0.00	0.00	36.34	2.57
5434	7511	6.157645	TGAAGCTAAGATCTCCTTTTCCTCAT	59.842	38.462	0.00	0.00	36.34	2.90
5435	7512	5.485353	TGAAGCTAAGATCTCCTTTTCCTCA	59.515	40.000	0.00	0.00	36.34	3.86
5436	7513	5.983540	TGAAGCTAAGATCTCCTTTTCCTC	58.016	41.667	0.00	0.00	36.34	3.71
5437	7514	6.380079	TTGAAGCTAAGATCTCCTTTTCCT	57.620	37.500	0.00	0.00	36.34	3.36
5438	7515	7.309177	GTTTTGAAGCTAAGATCTCCTTTTCC	58.691	38.462	0.00	0.00	36.34	3.13
5439	7516	7.040409	TGGTTTTGAAGCTAAGATCTCCTTTTC	60.040	37.037	0.00	0.00	36.34	2.29
5440	7517	6.777580	TGGTTTTGAAGCTAAGATCTCCTTTT	59.222	34.615	0.00	0.00	36.34	2.27
5441	7518	6.306987	TGGTTTTGAAGCTAAGATCTCCTTT	58.693	36.000	0.00	0.00	36.34	3.11
5442	7519	5.880901	TGGTTTTGAAGCTAAGATCTCCTT	58.119	37.500	0.00	0.00	38.87	3.36
5443	7520	5.505181	TGGTTTTGAAGCTAAGATCTCCT	57.495	39.130	0.00	0.00	0.00	3.69
5444	7521	5.940470	TCTTGGTTTTGAAGCTAAGATCTCC	59.060	40.000	0.00	0.00	0.00	3.71
5445	7522	6.876257	TCTCTTGGTTTTGAAGCTAAGATCTC	59.124	38.462	0.00	0.00	31.11	2.75
5446	7523	6.773638	TCTCTTGGTTTTGAAGCTAAGATCT	58.226	36.000	6.79	0.00	31.11	2.75
5447	7524	7.552330	AGATCTCTTGGTTTTGAAGCTAAGATC	59.448	37.037	6.79	10.69	31.11	2.75
5448	7525	7.401246	AGATCTCTTGGTTTTGAAGCTAAGAT	58.599	34.615	6.79	4.24	31.11	2.40
5449	7526	6.773638	AGATCTCTTGGTTTTGAAGCTAAGA	58.226	36.000	6.31	6.31	0.00	2.10
5450	7527	7.446001	AAGATCTCTTGGTTTTGAAGCTAAG	57.554	36.000	0.00	0.00	34.38	2.18
5453	7530	8.951243	GTTATAAGATCTCTTGGTTTTGAAGCT	58.049	33.333	0.00	0.00	37.40	3.74
5454	7531	8.951243	AGTTATAAGATCTCTTGGTTTTGAAGC	58.049	33.333	0.00	0.00	37.40	3.86
5477	7554	9.581289	AGTGCACTAGTATATCATAGAGAAGTT	57.419	33.333	20.16	0.00	0.00	2.66
5478	7555	9.008965	CAGTGCACTAGTATATCATAGAGAAGT	57.991	37.037	21.20	0.00	0.00	3.01
5479	7556	9.225436	TCAGTGCACTAGTATATCATAGAGAAG	57.775	37.037	21.20	0.06	0.00	2.85
5480	7557	9.225436	CTCAGTGCACTAGTATATCATAGAGAA	57.775	37.037	21.20	0.00	0.00	2.87
5481	7558	8.598041	TCTCAGTGCACTAGTATATCATAGAGA	58.402	37.037	21.20	18.31	0.00	3.10
5482	7559	8.664798	GTCTCAGTGCACTAGTATATCATAGAG	58.335	40.741	21.20	16.34	0.00	2.43
5483	7560	8.379331	AGTCTCAGTGCACTAGTATATCATAGA	58.621	37.037	21.20	6.98	0.00	1.98
5484	7561	8.450180	CAGTCTCAGTGCACTAGTATATCATAG	58.550	40.741	21.20	2.28	0.00	2.23
5485	7562	7.094592	GCAGTCTCAGTGCACTAGTATATCATA	60.095	40.741	21.20	0.00	43.79	2.15
5486	7563	6.294453	GCAGTCTCAGTGCACTAGTATATCAT	60.294	42.308	21.20	0.00	43.79	2.45
5487	7564	5.009110	GCAGTCTCAGTGCACTAGTATATCA	59.991	44.000	21.20	0.00	43.79	2.15
5488	7565	5.240623	AGCAGTCTCAGTGCACTAGTATATC	59.759	44.000	21.20	7.30	46.65	1.63
5489	7566	5.136828	AGCAGTCTCAGTGCACTAGTATAT	58.863	41.667	21.20	1.18	46.65	0.86
5490	7567	4.527944	AGCAGTCTCAGTGCACTAGTATA	58.472	43.478	21.20	0.47	46.65	1.47
5491	7568	3.360867	AGCAGTCTCAGTGCACTAGTAT	58.639	45.455	21.20	1.75	46.65	2.12
5492	7569	2.796557	AGCAGTCTCAGTGCACTAGTA	58.203	47.619	21.20	7.30	46.65	1.82
5493	7570	1.626686	AGCAGTCTCAGTGCACTAGT	58.373	50.000	21.20	4.07	46.65	2.57

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.