Multiple sequence alignment - TraesCS3D01G497200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G497200 chr3D 100.000 3219 0 0 966 4184 588393624 588396842 0.000000e+00 5945.0
1 TraesCS3D01G497200 chr3D 100.000 613 0 0 1 613 588392659 588393271 0.000000e+00 1133.0
2 TraesCS3D01G497200 chr3D 90.566 53 3 1 2324 2376 588394930 588394980 7.510000e-08 69.4
3 TraesCS3D01G497200 chr3D 90.566 53 3 1 2272 2322 588394982 588395034 7.510000e-08 69.4
4 TraesCS3D01G497200 chr3B 92.667 1350 49 20 2272 3580 786855673 786857013 0.000000e+00 1899.0
5 TraesCS3D01G497200 chr3B 90.165 1149 76 18 983 2102 786854406 786855546 0.000000e+00 1461.0
6 TraesCS3D01G497200 chr3B 90.741 216 10 7 391 601 786854154 786854364 3.190000e-71 279.0
7 TraesCS3D01G497200 chr3B 83.882 304 30 7 3746 4046 786857105 786857392 5.330000e-69 272.0
8 TraesCS3D01G497200 chr3B 94.118 153 7 1 2224 2376 786855573 786855723 9.050000e-57 231.0
9 TraesCS3D01G497200 chr3B 94.074 135 8 0 2093 2227 536903638 536903772 5.480000e-49 206.0
10 TraesCS3D01G497200 chr3B 92.908 141 8 2 2088 2227 8873974 8873835 1.970000e-48 204.0
11 TraesCS3D01G497200 chr3B 86.620 142 9 2 121 252 786853602 786853743 9.370000e-32 148.0
12 TraesCS3D01G497200 chr3B 90.566 53 3 1 2324 2376 786855621 786855671 7.510000e-08 69.4
13 TraesCS3D01G497200 chr3A 93.239 1272 43 13 2324 3565 718400560 718401818 0.000000e+00 1832.0
14 TraesCS3D01G497200 chr3A 88.083 772 49 16 966 1720 718399286 718400031 0.000000e+00 876.0
15 TraesCS3D01G497200 chr3A 93.525 417 24 3 1687 2102 718400102 718400516 5.940000e-173 617.0
16 TraesCS3D01G497200 chr3A 96.154 182 5 1 335 516 718399029 718399208 3.160000e-76 296.0
17 TraesCS3D01G497200 chr3A 89.011 91 9 1 2224 2314 718400513 718400602 1.230000e-20 111.0
18 TraesCS3D01G497200 chr3A 94.340 53 3 0 304 356 718399027 718399079 9.640000e-12 82.4
19 TraesCS3D01G497200 chr3A 100.000 35 0 0 1686 1720 718400032 718400066 9.710000e-07 65.8
20 TraesCS3D01G497200 chr7B 97.761 134 3 0 2094 2227 579349387 579349520 9.050000e-57 231.0
21 TraesCS3D01G497200 chr7B 96.403 139 4 1 2090 2227 646052804 646052666 1.170000e-55 228.0
22 TraesCS3D01G497200 chr7B 92.053 151 9 3 2079 2227 129310005 129309856 4.240000e-50 209.0
23 TraesCS3D01G497200 chr7B 94.118 136 7 1 2093 2227 118126342 118126207 5.480000e-49 206.0
24 TraesCS3D01G497200 chr7A 96.350 137 5 0 2098 2234 208247349 208247485 4.210000e-55 226.0
25 TraesCS3D01G497200 chr7A 93.103 145 9 1 2086 2230 663538336 663538193 1.180000e-50 211.0
26 TraesCS3D01G497200 chr5A 96.350 137 5 0 2098 2234 84022367 84022231 4.210000e-55 226.0
27 TraesCS3D01G497200 chr1D 95.745 141 5 1 2087 2227 488630176 488630315 4.210000e-55 226.0
28 TraesCS3D01G497200 chr7D 96.350 137 3 2 2099 2235 150359299 150359433 1.510000e-54 224.0
29 TraesCS3D01G497200 chr4A 97.692 130 3 0 2098 2227 236198093 236198222 1.510000e-54 224.0
30 TraesCS3D01G497200 chr6B 95.000 140 7 0 2101 2240 184798925 184799064 1.960000e-53 220.0
31 TraesCS3D01G497200 chr5B 95.000 140 7 0 2101 2240 330622424 330622285 1.960000e-53 220.0
32 TraesCS3D01G497200 chr2A 93.750 144 7 2 2085 2227 46335894 46336036 9.110000e-52 215.0
33 TraesCS3D01G497200 chr2A 94.203 138 7 1 2091 2227 773772178 773772041 4.240000e-50 209.0
34 TraesCS3D01G497200 chr2A 84.314 102 11 3 4060 4156 49710579 49710680 1.240000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G497200 chr3D 588392659 588396842 4183 False 1804.200000 5945 95.283000 1 4184 4 chr3D.!!$F1 4183
1 TraesCS3D01G497200 chr3B 786853602 786857392 3790 False 622.771429 1899 89.822714 121 4046 7 chr3B.!!$F2 3925
2 TraesCS3D01G497200 chr3A 718399027 718401818 2791 False 554.314286 1832 93.478857 304 3565 7 chr3A.!!$F1 3261

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
363 376 0.033504 TCTTCTCAGCCCAACGACAC 59.966 55.0 0.0 0.0 0.0 3.67 F
387 400 0.178992 CCACCTCTTTTGTCAGCCCA 60.179 55.0 0.0 0.0 0.0 5.36 F
2117 2580 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.0 0.0 0.0 0.0 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1651 2003 1.028130 GCCCAGAAATTAGGCTCAGC 58.972 55.0 0.0 0.0 43.62 4.26 R
2212 2675 1.108776 TGAATTACTCCCTCCGTCCG 58.891 55.0 0.0 0.0 0.00 4.79 R
3634 4216 0.036732 CAGCTTACTGGGCAGGTTCA 59.963 55.0 0.0 0.0 40.48 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.195617 CTTCTTTCTCTCACTTCATATTCACC 57.804 38.462 0.00 0.00 0.00 4.02
26 27 7.244886 TCTTTCTCTCACTTCATATTCACCA 57.755 36.000 0.00 0.00 0.00 4.17
27 28 7.099764 TCTTTCTCTCACTTCATATTCACCAC 58.900 38.462 0.00 0.00 0.00 4.16
28 29 5.344743 TCTCTCACTTCATATTCACCACC 57.655 43.478 0.00 0.00 0.00 4.61
29 30 4.162320 TCTCTCACTTCATATTCACCACCC 59.838 45.833 0.00 0.00 0.00 4.61
30 31 3.843619 TCTCACTTCATATTCACCACCCA 59.156 43.478 0.00 0.00 0.00 4.51
31 32 3.941483 CTCACTTCATATTCACCACCCAC 59.059 47.826 0.00 0.00 0.00 4.61
32 33 3.329225 TCACTTCATATTCACCACCCACA 59.671 43.478 0.00 0.00 0.00 4.17
33 34 4.018506 TCACTTCATATTCACCACCCACAT 60.019 41.667 0.00 0.00 0.00 3.21
34 35 4.096833 CACTTCATATTCACCACCCACATG 59.903 45.833 0.00 0.00 0.00 3.21
35 36 2.653726 TCATATTCACCACCCACATGC 58.346 47.619 0.00 0.00 0.00 4.06
36 37 1.682854 CATATTCACCACCCACATGCC 59.317 52.381 0.00 0.00 0.00 4.40
37 38 0.998928 TATTCACCACCCACATGCCT 59.001 50.000 0.00 0.00 0.00 4.75
38 39 0.612732 ATTCACCACCCACATGCCTG 60.613 55.000 0.00 0.00 0.00 4.85
39 40 2.005606 TTCACCACCCACATGCCTGT 62.006 55.000 0.00 0.00 35.44 4.00
48 49 3.391736 ACATGCCTGTGATCGGATG 57.608 52.632 0.00 0.00 33.22 3.51
49 50 0.816825 ACATGCCTGTGATCGGATGC 60.817 55.000 0.00 0.00 33.22 3.91
50 51 0.816421 CATGCCTGTGATCGGATGCA 60.816 55.000 0.00 0.00 0.00 3.96
51 52 0.109913 ATGCCTGTGATCGGATGCAT 59.890 50.000 0.00 0.00 34.81 3.96
52 53 0.758123 TGCCTGTGATCGGATGCATA 59.242 50.000 0.00 0.00 0.00 3.14
53 54 1.270465 TGCCTGTGATCGGATGCATAG 60.270 52.381 0.00 0.00 0.00 2.23
54 55 1.001293 GCCTGTGATCGGATGCATAGA 59.999 52.381 0.00 2.53 0.00 1.98
55 56 2.548707 GCCTGTGATCGGATGCATAGAA 60.549 50.000 0.00 0.00 0.00 2.10
56 57 3.732212 CCTGTGATCGGATGCATAGAAA 58.268 45.455 0.00 0.00 0.00 2.52
57 58 4.129380 CCTGTGATCGGATGCATAGAAAA 58.871 43.478 0.00 0.00 0.00 2.29
58 59 4.576053 CCTGTGATCGGATGCATAGAAAAA 59.424 41.667 0.00 0.00 0.00 1.94
112 113 8.818141 TTAAAAGATGATCGATCACTATCCAC 57.182 34.615 29.49 14.21 40.03 4.02
113 114 6.410942 AAAGATGATCGATCACTATCCACA 57.589 37.500 29.49 5.15 40.03 4.17
114 115 5.641783 AGATGATCGATCACTATCCACAG 57.358 43.478 29.49 0.00 40.03 3.66
115 116 4.462132 AGATGATCGATCACTATCCACAGG 59.538 45.833 29.49 0.00 40.03 4.00
116 117 2.297315 TGATCGATCACTATCCACAGGC 59.703 50.000 23.99 0.00 0.00 4.85
117 118 0.668535 TCGATCACTATCCACAGGCG 59.331 55.000 0.00 0.00 0.00 5.52
118 119 0.941463 CGATCACTATCCACAGGCGC 60.941 60.000 0.00 0.00 0.00 6.53
119 120 0.104855 GATCACTATCCACAGGCGCA 59.895 55.000 10.83 0.00 0.00 6.09
184 193 1.206831 GCGAAGAAGAAACCGTGCC 59.793 57.895 0.00 0.00 0.00 5.01
206 215 2.660802 CGAAACCCGTGTAGGCCT 59.339 61.111 11.78 11.78 39.21 5.19
244 255 1.755393 AAGCGGGACTTGGTCGTCTT 61.755 55.000 0.00 0.00 37.17 3.01
289 300 4.256813 GGAACGACAGAACCCGAC 57.743 61.111 0.00 0.00 0.00 4.79
290 301 1.364901 GGAACGACAGAACCCGACA 59.635 57.895 0.00 0.00 0.00 4.35
291 302 0.942884 GGAACGACAGAACCCGACAC 60.943 60.000 0.00 0.00 0.00 3.67
292 303 1.273455 GAACGACAGAACCCGACACG 61.273 60.000 0.00 0.00 0.00 4.49
293 304 3.103911 CGACAGAACCCGACACGC 61.104 66.667 0.00 0.00 0.00 5.34
294 305 2.028484 GACAGAACCCGACACGCA 59.972 61.111 0.00 0.00 0.00 5.24
295 306 2.279918 ACAGAACCCGACACGCAC 60.280 61.111 0.00 0.00 0.00 5.34
296 307 3.403057 CAGAACCCGACACGCACG 61.403 66.667 0.00 0.00 0.00 5.34
319 330 2.012902 GCATGCATGGCCACCTCTTC 62.013 60.000 27.34 3.43 0.00 2.87
322 333 1.817099 GCATGGCCACCTCTTCTCG 60.817 63.158 8.16 0.00 0.00 4.04
357 370 2.069776 CCACCTCTTCTCAGCCCAA 58.930 57.895 0.00 0.00 0.00 4.12
358 371 0.322008 CCACCTCTTCTCAGCCCAAC 60.322 60.000 0.00 0.00 0.00 3.77
359 372 0.671781 CACCTCTTCTCAGCCCAACG 60.672 60.000 0.00 0.00 0.00 4.10
363 376 0.033504 TCTTCTCAGCCCAACGACAC 59.966 55.000 0.00 0.00 0.00 3.67
364 377 0.249868 CTTCTCAGCCCAACGACACA 60.250 55.000 0.00 0.00 0.00 3.72
365 378 0.396435 TTCTCAGCCCAACGACACAT 59.604 50.000 0.00 0.00 0.00 3.21
368 381 2.672996 AGCCCAACGACACATGGC 60.673 61.111 0.00 0.00 42.48 4.40
369 382 3.747976 GCCCAACGACACATGGCC 61.748 66.667 0.00 0.00 36.07 5.36
370 383 2.282110 CCCAACGACACATGGCCA 60.282 61.111 8.56 8.56 35.28 5.36
371 384 2.625823 CCCAACGACACATGGCCAC 61.626 63.158 8.16 0.00 35.28 5.01
372 385 2.625823 CCAACGACACATGGCCACC 61.626 63.158 8.16 0.00 0.00 4.61
374 387 1.302511 AACGACACATGGCCACCTC 60.303 57.895 8.16 0.00 0.00 3.85
375 388 1.768684 AACGACACATGGCCACCTCT 61.769 55.000 8.16 0.00 0.00 3.69
377 390 0.606401 CGACACATGGCCACCTCTTT 60.606 55.000 8.16 0.00 0.00 2.52
380 393 1.331214 CACATGGCCACCTCTTTTGT 58.669 50.000 8.16 3.16 0.00 2.83
381 394 1.270550 CACATGGCCACCTCTTTTGTC 59.729 52.381 8.16 0.00 0.00 3.18
382 395 1.133513 ACATGGCCACCTCTTTTGTCA 60.134 47.619 8.16 0.00 0.00 3.58
383 396 1.542915 CATGGCCACCTCTTTTGTCAG 59.457 52.381 8.16 0.00 0.00 3.51
384 397 0.823356 TGGCCACCTCTTTTGTCAGC 60.823 55.000 0.00 0.00 0.00 4.26
385 398 1.527433 GGCCACCTCTTTTGTCAGCC 61.527 60.000 0.00 0.00 0.00 4.85
387 400 0.178992 CCACCTCTTTTGTCAGCCCA 60.179 55.000 0.00 0.00 0.00 5.36
528 853 2.285868 CCACCGATACCCTCCCCT 59.714 66.667 0.00 0.00 0.00 4.79
529 854 1.837499 CCACCGATACCCTCCCCTC 60.837 68.421 0.00 0.00 0.00 4.30
534 859 1.461655 GATACCCTCCCCTCCCCAC 60.462 68.421 0.00 0.00 0.00 4.61
576 901 3.347590 CTTTCCCCTCCCCACCCC 61.348 72.222 0.00 0.00 0.00 4.95
604 929 0.540830 CCCCCACCGAACCAAATCAA 60.541 55.000 0.00 0.00 0.00 2.57
605 930 1.333177 CCCCACCGAACCAAATCAAA 58.667 50.000 0.00 0.00 0.00 2.69
608 933 1.683917 CCACCGAACCAAATCAAACCA 59.316 47.619 0.00 0.00 0.00 3.67
609 934 2.298729 CCACCGAACCAAATCAAACCAT 59.701 45.455 0.00 0.00 0.00 3.55
611 936 2.560981 ACCGAACCAAATCAAACCATCC 59.439 45.455 0.00 0.00 0.00 3.51
612 937 2.560542 CCGAACCAAATCAAACCATCCA 59.439 45.455 0.00 0.00 0.00 3.41
1091 1416 2.833582 CCGCTCGCTTCCTCCCTA 60.834 66.667 0.00 0.00 0.00 3.53
1130 1455 3.374402 CTGCTCCTCCGTCGGTGT 61.374 66.667 11.88 0.00 0.00 4.16
1164 1505 1.923864 GTTTGGCTTGTTTGTTCGTGG 59.076 47.619 0.00 0.00 0.00 4.94
1298 1642 2.126071 CGACCACGCCTACTGGTG 60.126 66.667 0.00 0.00 42.42 4.17
1299 1643 2.632544 CGACCACGCCTACTGGTGA 61.633 63.158 0.00 0.00 46.34 4.02
1316 1663 4.101077 AGCCCCTCCCTCTCCCTG 62.101 72.222 0.00 0.00 0.00 4.45
1317 1664 4.095400 GCCCCTCCCTCTCCCTGA 62.095 72.222 0.00 0.00 0.00 3.86
1318 1665 3.041365 CCCCTCCCTCTCCCTGAT 58.959 66.667 0.00 0.00 0.00 2.90
1319 1666 1.319799 CCCCTCCCTCTCCCTGATT 59.680 63.158 0.00 0.00 0.00 2.57
1322 1669 1.344906 CCCTCCCTCTCCCTGATTTCT 60.345 57.143 0.00 0.00 0.00 2.52
1325 1672 1.135960 CCCTCTCCCTGATTTCTCCC 58.864 60.000 0.00 0.00 0.00 4.30
1348 1695 1.153489 CGCCCCTCATCTCACACTG 60.153 63.158 0.00 0.00 0.00 3.66
1367 1714 1.270094 TGGATATCCGATTCGTGTGGC 60.270 52.381 17.04 0.00 39.43 5.01
1373 1720 0.374758 CCGATTCGTGTGGCAGATTG 59.625 55.000 5.20 0.00 0.00 2.67
1374 1721 0.247814 CGATTCGTGTGGCAGATTGC 60.248 55.000 0.00 0.00 44.08 3.56
1406 1753 4.492570 GCGTTTGTCTCGTAGATGATTTGG 60.493 45.833 0.00 0.00 33.89 3.28
1418 1765 7.876068 TCGTAGATGATTTGGACACTTTAGTTT 59.124 33.333 0.00 0.00 0.00 2.66
1422 1769 9.793259 AGATGATTTGGACACTTTAGTTTTCTA 57.207 29.630 0.00 0.00 0.00 2.10
1515 1862 1.472082 TGCCCATGAATTACAAGCACG 59.528 47.619 0.00 0.00 31.52 5.34
1543 1890 2.438021 TGCACTCCAGTACACTTTTCCT 59.562 45.455 0.00 0.00 0.00 3.36
1567 1914 2.137810 TCCGCTAAAATTTGGGGAGG 57.862 50.000 7.66 6.13 39.34 4.30
1590 1938 6.154363 AGGGTGCTATTTTATTTTGCTGCTAA 59.846 34.615 0.00 0.00 0.00 3.09
1638 1990 3.526430 ACCCACCCTATTAAAGGTCTTCC 59.474 47.826 3.88 0.00 44.90 3.46
1665 2017 9.837525 CATTATTTATGAGCTGAGCCTAATTTC 57.162 33.333 0.00 0.00 36.26 2.17
1667 2019 6.932356 TTTATGAGCTGAGCCTAATTTCTG 57.068 37.500 0.00 0.00 0.00 3.02
1684 2036 4.007644 GGGCTTTGGGTGCTTGGC 62.008 66.667 0.00 0.00 0.00 4.52
1797 2253 6.316140 TGACTGTATTTATGGTTGTGATCAGC 59.684 38.462 0.00 0.00 0.00 4.26
1805 2261 2.289631 TGGTTGTGATCAGCGATGAACT 60.290 45.455 7.76 0.00 0.00 3.01
1813 2269 4.100035 TGATCAGCGATGAACTGGTTCTAT 59.900 41.667 7.76 6.58 40.14 1.98
1820 2276 6.313905 AGCGATGAACTGGTTCTATTTTGTAG 59.686 38.462 13.54 0.00 40.14 2.74
1838 2294 5.353394 TGTAGGCTTCTGGTAATTGGTAG 57.647 43.478 0.00 0.00 0.00 3.18
2092 2555 5.649782 AGCACTTTATGTGGGAATTTCAG 57.350 39.130 0.00 0.00 46.27 3.02
2102 2565 9.880157 TTATGTGGGAATTTCAGTAGTTAGTAC 57.120 33.333 0.00 0.00 0.00 2.73
2103 2566 7.549147 TGTGGGAATTTCAGTAGTTAGTACT 57.451 36.000 0.00 0.00 43.31 2.73
2104 2567 7.609056 TGTGGGAATTTCAGTAGTTAGTACTC 58.391 38.462 0.00 0.00 40.27 2.59
2106 2569 6.155737 TGGGAATTTCAGTAGTTAGTACTCCC 59.844 42.308 0.00 11.05 40.27 4.30
2107 2570 6.383436 GGGAATTTCAGTAGTTAGTACTCCCT 59.617 42.308 0.00 0.00 40.27 4.20
2108 2571 7.417683 GGGAATTTCAGTAGTTAGTACTCCCTC 60.418 44.444 0.00 0.00 40.27 4.30
2109 2572 7.417683 GGAATTTCAGTAGTTAGTACTCCCTCC 60.418 44.444 0.00 0.00 40.27 4.30
2110 2573 4.148128 TCAGTAGTTAGTACTCCCTCCG 57.852 50.000 0.00 0.00 40.27 4.63
2112 2575 3.876320 CAGTAGTTAGTACTCCCTCCGTC 59.124 52.174 0.00 0.00 40.27 4.79
2113 2576 2.433662 AGTTAGTACTCCCTCCGTCC 57.566 55.000 0.00 0.00 0.00 4.79
2114 2577 1.020437 GTTAGTACTCCCTCCGTCCG 58.980 60.000 0.00 0.00 0.00 4.79
2115 2578 0.911769 TTAGTACTCCCTCCGTCCGA 59.088 55.000 0.00 0.00 0.00 4.55
2116 2579 0.911769 TAGTACTCCCTCCGTCCGAA 59.088 55.000 0.00 0.00 0.00 4.30
2117 2580 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
2118 2581 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
2119 2582 1.479730 GTACTCCCTCCGTCCGAAAAT 59.520 52.381 0.00 0.00 0.00 1.82
2121 2584 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
2123 2586 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
2124 2587 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
2125 2588 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
2126 2589 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
2127 2590 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
2128 2591 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
2129 2592 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
2130 2593 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
2131 2594 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
2132 2595 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
2133 2596 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
2134 2597 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
2135 2598 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
2136 2599 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
2137 2600 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
2138 2601 7.975616 CCGAAAATACTTGTCATCAAAATGGAT 59.024 33.333 0.00 0.00 33.42 3.41
2146 2609 9.918630 ACTTGTCATCAAAATGGATAAAAAGAG 57.081 29.630 0.00 0.00 33.42 2.85
2192 2655 9.607333 ACATCTAGATACATCCTCTTTTATCCA 57.393 33.333 4.54 0.00 0.00 3.41
2201 2664 8.827832 ACATCCTCTTTTATCCATTTTGATGA 57.172 30.769 0.00 0.00 32.39 2.92
2202 2665 8.689972 ACATCCTCTTTTATCCATTTTGATGAC 58.310 33.333 0.00 0.00 32.39 3.06
2203 2666 8.689061 CATCCTCTTTTATCCATTTTGATGACA 58.311 33.333 0.00 0.00 0.00 3.58
2204 2667 8.648698 TCCTCTTTTATCCATTTTGATGACAA 57.351 30.769 0.00 0.00 0.00 3.18
2205 2668 8.742777 TCCTCTTTTATCCATTTTGATGACAAG 58.257 33.333 0.00 0.00 37.32 3.16
2206 2669 8.526147 CCTCTTTTATCCATTTTGATGACAAGT 58.474 33.333 0.00 0.00 37.32 3.16
2213 2676 8.915871 ATCCATTTTGATGACAAGTATTTTCG 57.084 30.769 0.00 0.00 37.32 3.46
2214 2677 7.312154 TCCATTTTGATGACAAGTATTTTCGG 58.688 34.615 0.00 0.00 37.32 4.30
2215 2678 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
2216 2679 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
2217 2680 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
2218 2681 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
2219 2682 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
2220 2683 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
2221 2684 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
2222 2685 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
2228 2691 1.856629 TTTCGGACGGAGGGAGTAAT 58.143 50.000 0.00 0.00 0.00 1.89
2382 2895 1.295792 TTTGTGAACGACTGCTCACC 58.704 50.000 0.00 0.00 39.85 4.02
2537 3053 3.005472 GCTGGTAACCCCTTTGTTTCTTC 59.995 47.826 0.00 0.00 0.00 2.87
2539 3055 4.611367 TGGTAACCCCTTTGTTTCTTCAA 58.389 39.130 0.00 0.00 0.00 2.69
2556 3076 3.961484 TCAATATGTGGGGGCACATTA 57.039 42.857 0.00 0.00 42.56 1.90
2570 3090 5.193679 GGGCACATTAATTTCAGGTAGACT 58.806 41.667 0.00 0.00 0.00 3.24
2716 3236 3.838903 AGGAGGAAGAAGACATTTACCGT 59.161 43.478 0.00 0.00 0.00 4.83
2917 3437 2.935201 CAAGAAGAAAGAGGGATCAGCG 59.065 50.000 0.00 0.00 0.00 5.18
2929 3449 0.460987 GATCAGCGTCAGGTTCAGGG 60.461 60.000 0.00 0.00 0.00 4.45
2953 3473 2.443255 AGGTTCAGTGTCCAAGGATGTT 59.557 45.455 9.10 0.00 0.00 2.71
2959 3479 0.251297 TGTCCAAGGATGTTGCAGGG 60.251 55.000 0.00 0.00 0.00 4.45
3078 3601 3.482232 AAGCGCCACCTGAAGCACT 62.482 57.895 2.29 0.00 0.00 4.40
3139 3686 3.312828 CATCAGCCTCTGTAGATAACGC 58.687 50.000 0.00 0.00 32.61 4.84
3470 4022 4.881850 GGTTGTTACATCCATCTACCCAAG 59.118 45.833 7.52 0.00 0.00 3.61
3529 4084 7.905493 GTGAATATACTTTGCTTACTGACTTGC 59.095 37.037 0.00 0.00 0.00 4.01
3534 4089 2.455674 TGCTTACTGACTTGCGATGT 57.544 45.000 0.00 0.00 0.00 3.06
3541 4096 2.682856 ACTGACTTGCGATGTTGTTGTT 59.317 40.909 0.00 0.00 0.00 2.83
3556 4111 0.320374 TTGTTAGTGCTCGGTCCCTG 59.680 55.000 0.00 0.00 0.00 4.45
3566 4121 1.826054 CGGTCCCTGGTTTGCACAA 60.826 57.895 0.00 0.00 0.00 3.33
3580 4135 3.399440 TGCACAATTTTGAATGGTCCC 57.601 42.857 0.00 0.00 0.00 4.46
3582 4137 4.155709 TGCACAATTTTGAATGGTCCCTA 58.844 39.130 0.00 0.00 0.00 3.53
3602 4184 5.186198 CCTAATCGTCTCTGGATGGTTTTT 58.814 41.667 0.00 0.00 34.14 1.94
3607 4189 3.642705 GTCTCTGGATGGTTTTTGTTGC 58.357 45.455 0.00 0.00 0.00 4.17
3610 4192 2.137523 CTGGATGGTTTTTGTTGCTGC 58.862 47.619 0.00 0.00 0.00 5.25
3611 4193 1.483827 TGGATGGTTTTTGTTGCTGCA 59.516 42.857 0.00 0.00 0.00 4.41
3619 4201 4.320129 GGTTTTTGTTGCTGCACAAGTTTT 60.320 37.500 0.00 0.00 39.50 2.43
3621 4203 4.660352 TTTGTTGCTGCACAAGTTTTTC 57.340 36.364 0.00 0.00 39.50 2.29
3625 4207 3.149436 TGCTGCACAAGTTTTTCTGAC 57.851 42.857 0.00 0.00 0.00 3.51
3630 4212 2.477863 GCACAAGTTTTTCTGACGTGCT 60.478 45.455 0.00 0.00 40.89 4.40
3631 4213 3.242608 GCACAAGTTTTTCTGACGTGCTA 60.243 43.478 0.00 0.00 40.89 3.49
3632 4214 4.271687 CACAAGTTTTTCTGACGTGCTAC 58.728 43.478 0.00 0.00 31.03 3.58
3633 4215 3.311596 ACAAGTTTTTCTGACGTGCTACC 59.688 43.478 0.00 0.00 31.03 3.18
3634 4216 3.470645 AGTTTTTCTGACGTGCTACCT 57.529 42.857 0.00 0.00 0.00 3.08
3635 4217 3.131396 AGTTTTTCTGACGTGCTACCTG 58.869 45.455 0.00 0.00 0.00 4.00
3636 4218 3.128349 GTTTTTCTGACGTGCTACCTGA 58.872 45.455 0.00 0.00 0.00 3.86
3637 4219 3.462483 TTTTCTGACGTGCTACCTGAA 57.538 42.857 0.00 0.00 0.00 3.02
3638 4220 2.433868 TTCTGACGTGCTACCTGAAC 57.566 50.000 0.00 0.00 0.00 3.18
3639 4221 0.601558 TCTGACGTGCTACCTGAACC 59.398 55.000 0.00 0.00 0.00 3.62
3640 4222 0.603569 CTGACGTGCTACCTGAACCT 59.396 55.000 0.00 0.00 0.00 3.50
3641 4223 0.317160 TGACGTGCTACCTGAACCTG 59.683 55.000 0.00 0.00 0.00 4.00
3642 4224 1.004918 ACGTGCTACCTGAACCTGC 60.005 57.895 0.00 0.00 0.00 4.85
3643 4225 1.741770 CGTGCTACCTGAACCTGCC 60.742 63.158 0.00 0.00 0.00 4.85
3644 4226 1.377333 GTGCTACCTGAACCTGCCC 60.377 63.158 0.00 0.00 0.00 5.36
3645 4227 1.845664 TGCTACCTGAACCTGCCCA 60.846 57.895 0.00 0.00 0.00 5.36
3646 4228 1.078143 GCTACCTGAACCTGCCCAG 60.078 63.158 0.00 0.00 0.00 4.45
3647 4229 1.842381 GCTACCTGAACCTGCCCAGT 61.842 60.000 0.00 0.00 0.00 4.00
3648 4230 1.568504 CTACCTGAACCTGCCCAGTA 58.431 55.000 0.00 0.00 0.00 2.74
3649 4231 1.906574 CTACCTGAACCTGCCCAGTAA 59.093 52.381 0.00 0.00 0.00 2.24
3650 4232 0.693049 ACCTGAACCTGCCCAGTAAG 59.307 55.000 0.00 0.00 0.00 2.34
3651 4233 0.678048 CCTGAACCTGCCCAGTAAGC 60.678 60.000 0.00 0.00 0.00 3.09
3652 4234 0.326264 CTGAACCTGCCCAGTAAGCT 59.674 55.000 0.00 0.00 0.00 3.74
3653 4235 0.036732 TGAACCTGCCCAGTAAGCTG 59.963 55.000 0.00 0.00 42.22 4.24
3654 4236 1.303643 AACCTGCCCAGTAAGCTGC 60.304 57.895 0.00 0.00 41.26 5.25
3655 4237 2.067932 AACCTGCCCAGTAAGCTGCA 62.068 55.000 1.02 0.00 41.26 4.41
3656 4238 2.042831 CCTGCCCAGTAAGCTGCAC 61.043 63.158 1.02 0.00 41.26 4.57
3657 4239 1.302752 CTGCCCAGTAAGCTGCACA 60.303 57.895 1.02 0.00 41.26 4.57
3658 4240 0.890542 CTGCCCAGTAAGCTGCACAA 60.891 55.000 1.02 0.00 41.26 3.33
3659 4241 0.890542 TGCCCAGTAAGCTGCACAAG 60.891 55.000 1.02 0.00 41.26 3.16
3660 4242 0.890996 GCCCAGTAAGCTGCACAAGT 60.891 55.000 1.02 0.00 41.26 3.16
3661 4243 1.609208 CCCAGTAAGCTGCACAAGTT 58.391 50.000 1.02 0.00 41.26 2.66
3662 4244 1.956477 CCCAGTAAGCTGCACAAGTTT 59.044 47.619 1.02 0.00 41.26 2.66
3663 4245 2.362077 CCCAGTAAGCTGCACAAGTTTT 59.638 45.455 1.02 0.00 41.26 2.43
3664 4246 3.181476 CCCAGTAAGCTGCACAAGTTTTT 60.181 43.478 1.02 0.00 41.26 1.94
3665 4247 4.044426 CCAGTAAGCTGCACAAGTTTTTC 58.956 43.478 1.02 0.00 41.26 2.29
3666 4248 4.202050 CCAGTAAGCTGCACAAGTTTTTCT 60.202 41.667 1.02 0.00 41.26 2.52
3667 4249 4.736793 CAGTAAGCTGCACAAGTTTTTCTG 59.263 41.667 1.02 0.00 35.77 3.02
3668 4250 4.640201 AGTAAGCTGCACAAGTTTTTCTGA 59.360 37.500 1.02 0.00 31.02 3.27
3669 4251 4.454728 AAGCTGCACAAGTTTTTCTGAA 57.545 36.364 1.02 0.00 0.00 3.02
3670 4252 4.037858 AGCTGCACAAGTTTTTCTGAAG 57.962 40.909 1.02 0.00 0.00 3.02
3671 4253 3.445096 AGCTGCACAAGTTTTTCTGAAGT 59.555 39.130 1.02 0.00 0.00 3.01
3672 4254 3.549070 GCTGCACAAGTTTTTCTGAAGTG 59.451 43.478 0.00 2.02 0.00 3.16
3673 4255 3.510719 TGCACAAGTTTTTCTGAAGTGC 58.489 40.909 17.95 17.95 43.72 4.40
3674 4256 3.193267 TGCACAAGTTTTTCTGAAGTGCT 59.807 39.130 22.38 7.48 43.76 4.40
3675 4257 4.397730 TGCACAAGTTTTTCTGAAGTGCTA 59.602 37.500 22.38 11.86 43.76 3.49
3676 4258 4.735338 GCACAAGTTTTTCTGAAGTGCTAC 59.265 41.667 17.66 3.37 42.02 3.58
3677 4259 5.273944 CACAAGTTTTTCTGAAGTGCTACC 58.726 41.667 0.00 0.00 0.00 3.18
3678 4260 5.066505 CACAAGTTTTTCTGAAGTGCTACCT 59.933 40.000 0.00 0.00 0.00 3.08
3679 4261 5.066505 ACAAGTTTTTCTGAAGTGCTACCTG 59.933 40.000 0.00 0.00 0.00 4.00
3680 4262 5.036117 AGTTTTTCTGAAGTGCTACCTGA 57.964 39.130 0.00 0.00 0.00 3.86
3681 4263 5.437060 AGTTTTTCTGAAGTGCTACCTGAA 58.563 37.500 0.00 0.00 0.00 3.02
3682 4264 5.297029 AGTTTTTCTGAAGTGCTACCTGAAC 59.703 40.000 0.00 0.00 0.00 3.18
3683 4265 3.402628 TTCTGAAGTGCTACCTGAACC 57.597 47.619 0.00 0.00 0.00 3.62
3684 4266 2.609747 TCTGAAGTGCTACCTGAACCT 58.390 47.619 0.00 0.00 0.00 3.50
3685 4267 2.300152 TCTGAAGTGCTACCTGAACCTG 59.700 50.000 0.00 0.00 0.00 4.00
3686 4268 1.270839 TGAAGTGCTACCTGAACCTGC 60.271 52.381 0.00 0.00 0.00 4.85
3687 4269 0.036875 AAGTGCTACCTGAACCTGCC 59.963 55.000 0.00 0.00 0.00 4.85
3688 4270 1.377333 GTGCTACCTGAACCTGCCC 60.377 63.158 0.00 0.00 0.00 5.36
3689 4271 1.845664 TGCTACCTGAACCTGCCCA 60.846 57.895 0.00 0.00 0.00 5.36
3690 4272 1.078143 GCTACCTGAACCTGCCCAG 60.078 63.158 0.00 0.00 0.00 4.45
3691 4273 1.842381 GCTACCTGAACCTGCCCAGT 61.842 60.000 0.00 0.00 0.00 4.00
3692 4274 0.250513 CTACCTGAACCTGCCCAGTC 59.749 60.000 0.00 0.00 0.00 3.51
3693 4275 0.472925 TACCTGAACCTGCCCAGTCA 60.473 55.000 0.00 0.00 0.00 3.41
3694 4276 1.002868 CCTGAACCTGCCCAGTCAG 60.003 63.158 8.26 8.26 37.77 3.51
3695 4277 1.673665 CTGAACCTGCCCAGTCAGC 60.674 63.158 3.82 0.00 31.80 4.26
3696 4278 2.121992 CTGAACCTGCCCAGTCAGCT 62.122 60.000 3.82 0.00 31.80 4.24
3697 4279 1.673665 GAACCTGCCCAGTCAGCTG 60.674 63.158 7.63 7.63 42.22 4.24
3698 4280 3.857309 AACCTGCCCAGTCAGCTGC 62.857 63.158 9.47 4.26 41.26 5.25
3699 4281 4.340246 CCTGCCCAGTCAGCTGCA 62.340 66.667 9.47 0.67 41.26 4.41
3700 4282 2.045242 CTGCCCAGTCAGCTGCAT 60.045 61.111 9.47 0.00 41.26 3.96
3701 4283 2.045634 TGCCCAGTCAGCTGCATC 60.046 61.111 9.47 1.93 41.26 3.91
3702 4284 3.200593 GCCCAGTCAGCTGCATCG 61.201 66.667 9.47 0.00 41.26 3.84
3703 4285 3.200593 CCCAGTCAGCTGCATCGC 61.201 66.667 9.47 0.00 41.26 4.58
3704 4286 2.435410 CCAGTCAGCTGCATCGCA 60.435 61.111 9.47 0.00 41.26 5.10
3705 4287 2.036571 CCAGTCAGCTGCATCGCAA 61.037 57.895 9.47 0.00 41.26 4.85
3706 4288 1.134075 CAGTCAGCTGCATCGCAAC 59.866 57.895 9.47 0.00 38.41 4.17
3707 4289 1.004080 AGTCAGCTGCATCGCAACT 60.004 52.632 9.47 2.07 38.41 3.16
3709 4291 2.483745 CAGCTGCATCGCAACTGG 59.516 61.111 10.75 0.00 45.48 4.00
3710 4292 2.749044 AGCTGCATCGCAACTGGG 60.749 61.111 1.02 0.00 38.41 4.45
3711 4293 3.058160 GCTGCATCGCAACTGGGT 61.058 61.111 0.00 0.00 38.41 4.51
3712 4294 2.629656 GCTGCATCGCAACTGGGTT 61.630 57.895 0.00 0.00 38.41 4.11
3713 4295 1.503542 CTGCATCGCAACTGGGTTC 59.496 57.895 0.00 0.00 38.41 3.62
3714 4296 1.228094 TGCATCGCAACTGGGTTCA 60.228 52.632 0.00 0.00 34.76 3.18
3715 4297 1.210155 GCATCGCAACTGGGTTCAC 59.790 57.895 0.00 0.00 0.00 3.18
3716 4298 1.237285 GCATCGCAACTGGGTTCACT 61.237 55.000 0.00 0.00 0.00 3.41
3717 4299 0.798776 CATCGCAACTGGGTTCACTC 59.201 55.000 0.00 0.00 0.00 3.51
3718 4300 0.321653 ATCGCAACTGGGTTCACTCC 60.322 55.000 0.00 0.00 0.00 3.85
3719 4301 2.317609 CGCAACTGGGTTCACTCCG 61.318 63.158 0.00 0.00 0.00 4.63
3720 4302 2.617274 GCAACTGGGTTCACTCCGC 61.617 63.158 0.00 0.00 0.00 5.54
3721 4303 1.966451 CAACTGGGTTCACTCCGCC 60.966 63.158 0.00 0.00 0.00 6.13
3722 4304 3.530910 AACTGGGTTCACTCCGCCG 62.531 63.158 0.00 0.00 0.00 6.46
3723 4305 3.691342 CTGGGTTCACTCCGCCGA 61.691 66.667 0.00 0.00 0.00 5.54
3724 4306 3.934391 CTGGGTTCACTCCGCCGAC 62.934 68.421 0.00 0.00 0.00 4.79
3725 4307 3.998672 GGGTTCACTCCGCCGACA 61.999 66.667 0.00 0.00 0.00 4.35
3744 4326 0.689745 AGGCCTATGCGAAGTACCCA 60.690 55.000 1.29 0.00 38.85 4.51
3745 4327 0.179468 GGCCTATGCGAAGTACCCAA 59.821 55.000 0.00 0.00 38.85 4.12
3746 4328 1.296727 GCCTATGCGAAGTACCCAAC 58.703 55.000 0.00 0.00 0.00 3.77
3747 4329 1.949465 CCTATGCGAAGTACCCAACC 58.051 55.000 0.00 0.00 0.00 3.77
3748 4330 1.474498 CCTATGCGAAGTACCCAACCC 60.474 57.143 0.00 0.00 0.00 4.11
3749 4331 1.485066 CTATGCGAAGTACCCAACCCT 59.515 52.381 0.00 0.00 0.00 4.34
3751 4333 0.475044 TGCGAAGTACCCAACCCTTT 59.525 50.000 0.00 0.00 0.00 3.11
3752 4334 1.133730 TGCGAAGTACCCAACCCTTTT 60.134 47.619 0.00 0.00 0.00 2.27
3753 4335 1.958579 GCGAAGTACCCAACCCTTTTT 59.041 47.619 0.00 0.00 0.00 1.94
3846 4429 3.306434 GCCGACGGTTAAGAGAGAAAATC 59.694 47.826 16.73 0.00 0.00 2.17
3865 4448 3.574780 GGCTAGGCCGTGTGTTTC 58.425 61.111 4.61 0.00 39.62 2.78
3868 4451 0.727398 GCTAGGCCGTGTGTTTCATC 59.273 55.000 0.00 0.00 0.00 2.92
3869 4452 1.676014 GCTAGGCCGTGTGTTTCATCT 60.676 52.381 0.00 0.00 0.00 2.90
3881 4464 6.507023 GTGTGTTTCATCTTCAATGTTCCTT 58.493 36.000 0.00 0.00 0.00 3.36
3883 4466 5.853282 GTGTTTCATCTTCAATGTTCCTTCG 59.147 40.000 0.00 0.00 0.00 3.79
3894 4477 3.762407 TGTTCCTTCGTTCATGGAGAA 57.238 42.857 0.00 0.00 30.03 2.87
3930 4513 5.828328 TCTCTCTGACTATCGCCTGATTTTA 59.172 40.000 0.00 0.00 35.99 1.52
3940 4523 4.501071 TCGCCTGATTTTACTTCACTACC 58.499 43.478 0.00 0.00 0.00 3.18
3945 4528 5.006746 CCTGATTTTACTTCACTACCATCGC 59.993 44.000 0.00 0.00 0.00 4.58
3947 4530 5.935206 TGATTTTACTTCACTACCATCGCAA 59.065 36.000 0.00 0.00 0.00 4.85
3948 4531 6.597672 TGATTTTACTTCACTACCATCGCAAT 59.402 34.615 0.00 0.00 0.00 3.56
3949 4532 5.794687 TTTACTTCACTACCATCGCAATG 57.205 39.130 0.00 0.00 0.00 2.82
3957 4540 2.711311 CATCGCAATGGGCACTCG 59.289 61.111 0.00 0.00 45.17 4.18
3958 4541 2.514592 ATCGCAATGGGCACTCGG 60.515 61.111 0.00 0.00 45.17 4.63
3962 4545 3.197790 CAATGGGCACTCGGCGAG 61.198 66.667 33.42 33.42 46.16 5.03
3975 4558 1.960612 GGCGAGCTGTCCGATCTAT 59.039 57.895 0.00 0.00 0.00 1.98
3986 4569 2.726760 GTCCGATCTATGTTGCTTAGCG 59.273 50.000 0.00 0.00 0.00 4.26
3998 4581 4.401519 TGTTGCTTAGCGTACTATTCCTCT 59.598 41.667 0.00 0.00 0.00 3.69
4009 4592 5.163854 CGTACTATTCCTCTTTGCAACAAGG 60.164 44.000 16.85 16.85 0.00 3.61
4031 4615 8.755018 CAAGGTATTGTTTTACTCTTTTGCAAG 58.245 33.333 0.00 0.00 0.00 4.01
4032 4616 8.007405 AGGTATTGTTTTACTCTTTTGCAAGT 57.993 30.769 0.00 0.00 0.00 3.16
4046 4630 9.387123 CTCTTTTGCAAGTAGAGTATTGTTTTC 57.613 33.333 22.82 0.00 32.60 2.29
4047 4631 8.898761 TCTTTTGCAAGTAGAGTATTGTTTTCA 58.101 29.630 0.00 0.00 0.00 2.69
4048 4632 9.683069 CTTTTGCAAGTAGAGTATTGTTTTCAT 57.317 29.630 0.00 0.00 0.00 2.57
4049 4633 9.462174 TTTTGCAAGTAGAGTATTGTTTTCATG 57.538 29.630 0.00 0.00 0.00 3.07
4050 4634 7.744087 TGCAAGTAGAGTATTGTTTTCATGT 57.256 32.000 0.00 0.00 0.00 3.21
4051 4635 7.806690 TGCAAGTAGAGTATTGTTTTCATGTC 58.193 34.615 0.00 0.00 0.00 3.06
4052 4636 7.443879 TGCAAGTAGAGTATTGTTTTCATGTCA 59.556 33.333 0.00 0.00 0.00 3.58
4053 4637 8.289618 GCAAGTAGAGTATTGTTTTCATGTCAA 58.710 33.333 0.00 0.00 0.00 3.18
4086 4670 9.614792 ACAAGAGTATTGTTTTAGAAAGTGACT 57.385 29.630 0.00 0.00 0.00 3.41
4091 4675 8.989980 AGTATTGTTTTAGAAAGTGACTACTGC 58.010 33.333 0.00 0.00 37.19 4.40
4092 4676 7.801716 ATTGTTTTAGAAAGTGACTACTGCA 57.198 32.000 0.00 0.00 37.19 4.41
4093 4677 7.618502 TTGTTTTAGAAAGTGACTACTGCAA 57.381 32.000 0.00 0.00 37.19 4.08
4094 4678 7.618502 TGTTTTAGAAAGTGACTACTGCAAA 57.381 32.000 0.00 0.00 37.19 3.68
4095 4679 8.046294 TGTTTTAGAAAGTGACTACTGCAAAA 57.954 30.769 0.00 0.00 37.19 2.44
4096 4680 8.181573 TGTTTTAGAAAGTGACTACTGCAAAAG 58.818 33.333 0.00 0.00 37.19 2.27
4097 4681 6.861065 TTAGAAAGTGACTACTGCAAAAGG 57.139 37.500 0.00 0.00 37.19 3.11
4098 4682 5.036117 AGAAAGTGACTACTGCAAAAGGA 57.964 39.130 0.00 0.00 37.19 3.36
4099 4683 5.059833 AGAAAGTGACTACTGCAAAAGGAG 58.940 41.667 0.00 0.00 43.41 3.69
4100 4684 2.772287 AGTGACTACTGCAAAAGGAGC 58.228 47.619 0.00 0.00 41.13 4.70
4101 4685 1.807142 GTGACTACTGCAAAAGGAGCC 59.193 52.381 0.00 0.00 41.13 4.70
4102 4686 1.699634 TGACTACTGCAAAAGGAGCCT 59.300 47.619 0.00 0.00 41.13 4.58
4103 4687 2.106511 TGACTACTGCAAAAGGAGCCTT 59.893 45.455 0.00 0.00 41.13 4.35
4104 4688 2.485814 GACTACTGCAAAAGGAGCCTTG 59.514 50.000 1.91 0.00 41.13 3.61
4105 4689 2.158608 ACTACTGCAAAAGGAGCCTTGT 60.159 45.455 1.91 0.00 41.13 3.16
4106 4690 1.780503 ACTGCAAAAGGAGCCTTGTT 58.219 45.000 1.91 0.00 36.26 2.83
4107 4691 2.110578 ACTGCAAAAGGAGCCTTGTTT 58.889 42.857 1.91 0.00 36.26 2.83
4108 4692 2.101415 ACTGCAAAAGGAGCCTTGTTTC 59.899 45.455 1.91 0.00 36.26 2.78
4109 4693 2.101249 CTGCAAAAGGAGCCTTGTTTCA 59.899 45.455 1.91 0.00 36.26 2.69
4110 4694 2.101249 TGCAAAAGGAGCCTTGTTTCAG 59.899 45.455 1.91 0.00 36.26 3.02
4111 4695 2.362077 GCAAAAGGAGCCTTGTTTCAGA 59.638 45.455 1.91 0.00 36.26 3.27
4112 4696 3.181476 GCAAAAGGAGCCTTGTTTCAGAA 60.181 43.478 1.91 0.00 36.26 3.02
4113 4697 4.680440 GCAAAAGGAGCCTTGTTTCAGAAA 60.680 41.667 1.91 0.00 36.26 2.52
4114 4698 4.655762 AAAGGAGCCTTGTTTCAGAAAC 57.344 40.909 17.85 17.85 41.73 2.78
4124 4708 3.601435 TGTTTCAGAAACAGAACGGTGA 58.399 40.909 22.53 0.00 45.79 4.02
4125 4709 3.372822 TGTTTCAGAAACAGAACGGTGAC 59.627 43.478 22.53 0.00 45.79 3.67
4126 4710 3.536956 TTCAGAAACAGAACGGTGACT 57.463 42.857 0.00 0.00 0.00 3.41
4127 4711 4.659111 TTCAGAAACAGAACGGTGACTA 57.341 40.909 0.00 0.00 0.00 2.59
4128 4712 3.973657 TCAGAAACAGAACGGTGACTAC 58.026 45.455 0.00 0.00 0.00 2.73
4129 4713 3.635373 TCAGAAACAGAACGGTGACTACT 59.365 43.478 0.00 0.00 0.00 2.57
4130 4714 3.736252 CAGAAACAGAACGGTGACTACTG 59.264 47.826 0.00 0.00 39.18 2.74
4132 4716 4.581824 AGAAACAGAACGGTGACTACTGTA 59.418 41.667 0.00 0.00 45.53 2.74
4133 4717 4.924305 AACAGAACGGTGACTACTGTAA 57.076 40.909 0.00 0.00 45.53 2.41
4134 4718 4.234530 ACAGAACGGTGACTACTGTAAC 57.765 45.455 0.00 0.00 45.53 2.50
4135 4719 3.633525 ACAGAACGGTGACTACTGTAACA 59.366 43.478 0.00 0.00 45.53 2.41
4136 4720 4.098349 ACAGAACGGTGACTACTGTAACAA 59.902 41.667 0.00 0.00 45.53 2.83
4137 4721 4.680110 CAGAACGGTGACTACTGTAACAAG 59.320 45.833 0.00 0.00 45.53 3.16
4138 4722 4.581824 AGAACGGTGACTACTGTAACAAGA 59.418 41.667 0.00 0.00 45.53 3.02
4139 4723 4.500603 ACGGTGACTACTGTAACAAGAG 57.499 45.455 0.00 0.00 44.46 2.85
4140 4724 3.243336 CGGTGACTACTGTAACAAGAGC 58.757 50.000 0.00 0.00 28.90 4.09
4141 4725 3.057456 CGGTGACTACTGTAACAAGAGCT 60.057 47.826 0.00 0.00 28.90 4.09
4142 4726 4.558898 CGGTGACTACTGTAACAAGAGCTT 60.559 45.833 0.00 0.00 28.90 3.74
4143 4727 5.298347 GGTGACTACTGTAACAAGAGCTTT 58.702 41.667 0.00 0.00 28.90 3.51
4144 4728 5.177696 GGTGACTACTGTAACAAGAGCTTTG 59.822 44.000 0.00 0.00 28.90 2.77
4145 4729 5.753921 GTGACTACTGTAACAAGAGCTTTGT 59.246 40.000 8.03 8.03 0.00 2.83
4146 4730 6.258068 GTGACTACTGTAACAAGAGCTTTGTT 59.742 38.462 22.04 22.04 44.03 2.83
4147 4731 6.821665 TGACTACTGTAACAAGAGCTTTGTTT 59.178 34.615 22.95 13.08 42.10 2.83
4148 4732 7.011109 TGACTACTGTAACAAGAGCTTTGTTTC 59.989 37.037 22.95 19.61 42.10 2.78
4149 4733 6.821665 ACTACTGTAACAAGAGCTTTGTTTCA 59.178 34.615 22.95 21.84 42.10 2.69
4150 4734 6.699575 ACTGTAACAAGAGCTTTGTTTCAT 57.300 33.333 22.95 14.67 42.10 2.57
4151 4735 7.801716 ACTGTAACAAGAGCTTTGTTTCATA 57.198 32.000 22.95 9.80 42.10 2.15
4152 4736 8.220755 ACTGTAACAAGAGCTTTGTTTCATAA 57.779 30.769 22.95 9.54 42.10 1.90
4153 4737 8.682710 ACTGTAACAAGAGCTTTGTTTCATAAA 58.317 29.630 22.95 9.04 42.10 1.40
4154 4738 8.850454 TGTAACAAGAGCTTTGTTTCATAAAC 57.150 30.769 22.95 16.84 42.10 2.01
4165 4749 5.258685 TGTTTCATAAACACGTCGATGAC 57.741 39.130 12.58 0.00 45.79 3.06
4166 4750 4.986034 TGTTTCATAAACACGTCGATGACT 59.014 37.500 12.58 0.00 45.79 3.41
4167 4751 6.151004 TGTTTCATAAACACGTCGATGACTA 58.849 36.000 12.58 0.00 45.79 2.59
4168 4752 6.809689 TGTTTCATAAACACGTCGATGACTAT 59.190 34.615 12.58 0.00 45.79 2.12
4169 4753 7.329962 TGTTTCATAAACACGTCGATGACTATT 59.670 33.333 12.58 3.61 45.79 1.73
4170 4754 6.806120 TCATAAACACGTCGATGACTATTG 57.194 37.500 12.58 0.81 0.00 1.90
4171 4755 3.991605 AAACACGTCGATGACTATTGC 57.008 42.857 12.58 0.00 0.00 3.56
4172 4756 2.647529 ACACGTCGATGACTATTGCA 57.352 45.000 12.58 0.00 0.00 4.08
4173 4757 2.954316 ACACGTCGATGACTATTGCAA 58.046 42.857 12.58 0.00 0.00 4.08
4174 4758 2.666508 ACACGTCGATGACTATTGCAAC 59.333 45.455 12.58 0.00 0.00 4.17
4175 4759 2.666022 CACGTCGATGACTATTGCAACA 59.334 45.455 12.58 0.00 0.00 3.33
4176 4760 3.122780 CACGTCGATGACTATTGCAACAA 59.877 43.478 12.58 0.00 0.00 2.83
4177 4761 3.367932 ACGTCGATGACTATTGCAACAAG 59.632 43.478 12.58 5.06 0.00 3.16
4178 4762 3.612423 CGTCGATGACTATTGCAACAAGA 59.388 43.478 15.62 5.30 0.00 3.02
4179 4763 4.259570 CGTCGATGACTATTGCAACAAGAG 60.260 45.833 15.62 7.58 0.00 2.85
4180 4764 3.618594 TCGATGACTATTGCAACAAGAGC 59.381 43.478 15.62 8.68 0.00 4.09
4181 4765 3.620374 CGATGACTATTGCAACAAGAGCT 59.380 43.478 15.62 0.00 0.00 4.09
4182 4766 4.093998 CGATGACTATTGCAACAAGAGCTT 59.906 41.667 15.62 6.88 0.00 3.74
4183 4767 5.391310 CGATGACTATTGCAACAAGAGCTTT 60.391 40.000 15.62 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.821359 TGGTGAATATGAAGTGAGAGAAAGAAG 59.179 37.037 0.00 0.00 0.00 2.85
1 2 7.604164 GTGGTGAATATGAAGTGAGAGAAAGAA 59.396 37.037 0.00 0.00 0.00 2.52
2 3 7.099764 GTGGTGAATATGAAGTGAGAGAAAGA 58.900 38.462 0.00 0.00 0.00 2.52
3 4 6.314896 GGTGGTGAATATGAAGTGAGAGAAAG 59.685 42.308 0.00 0.00 0.00 2.62
4 5 6.173339 GGTGGTGAATATGAAGTGAGAGAAA 58.827 40.000 0.00 0.00 0.00 2.52
5 6 5.338381 GGGTGGTGAATATGAAGTGAGAGAA 60.338 44.000 0.00 0.00 0.00 2.87
6 7 4.162320 GGGTGGTGAATATGAAGTGAGAGA 59.838 45.833 0.00 0.00 0.00 3.10
7 8 4.080919 TGGGTGGTGAATATGAAGTGAGAG 60.081 45.833 0.00 0.00 0.00 3.20
8 9 3.843619 TGGGTGGTGAATATGAAGTGAGA 59.156 43.478 0.00 0.00 0.00 3.27
9 10 3.941483 GTGGGTGGTGAATATGAAGTGAG 59.059 47.826 0.00 0.00 0.00 3.51
10 11 3.329225 TGTGGGTGGTGAATATGAAGTGA 59.671 43.478 0.00 0.00 0.00 3.41
11 12 3.684908 TGTGGGTGGTGAATATGAAGTG 58.315 45.455 0.00 0.00 0.00 3.16
12 13 4.272489 CATGTGGGTGGTGAATATGAAGT 58.728 43.478 0.00 0.00 0.00 3.01
13 14 3.067180 GCATGTGGGTGGTGAATATGAAG 59.933 47.826 0.00 0.00 0.00 3.02
14 15 3.023119 GCATGTGGGTGGTGAATATGAA 58.977 45.455 0.00 0.00 0.00 2.57
15 16 2.653726 GCATGTGGGTGGTGAATATGA 58.346 47.619 0.00 0.00 0.00 2.15
16 17 1.682854 GGCATGTGGGTGGTGAATATG 59.317 52.381 0.00 0.00 0.00 1.78
17 18 1.570501 AGGCATGTGGGTGGTGAATAT 59.429 47.619 0.00 0.00 0.00 1.28
18 19 0.998928 AGGCATGTGGGTGGTGAATA 59.001 50.000 0.00 0.00 0.00 1.75
19 20 0.612732 CAGGCATGTGGGTGGTGAAT 60.613 55.000 0.00 0.00 0.00 2.57
20 21 1.228521 CAGGCATGTGGGTGGTGAA 60.229 57.895 0.00 0.00 0.00 3.18
21 22 2.435663 CAGGCATGTGGGTGGTGA 59.564 61.111 0.00 0.00 0.00 4.02
22 23 2.115910 ACAGGCATGTGGGTGGTG 59.884 61.111 1.71 0.00 38.57 4.17
30 31 0.816825 GCATCCGATCACAGGCATGT 60.817 55.000 0.00 0.00 41.57 3.21
31 32 0.816421 TGCATCCGATCACAGGCATG 60.816 55.000 0.00 0.00 0.00 4.06
32 33 0.109913 ATGCATCCGATCACAGGCAT 59.890 50.000 7.10 7.10 37.17 4.40
33 34 0.758123 TATGCATCCGATCACAGGCA 59.242 50.000 0.19 3.00 35.54 4.75
34 35 1.001293 TCTATGCATCCGATCACAGGC 59.999 52.381 0.19 0.00 0.00 4.85
35 36 3.391506 TTCTATGCATCCGATCACAGG 57.608 47.619 0.19 0.00 0.00 4.00
36 37 5.739752 TTTTTCTATGCATCCGATCACAG 57.260 39.130 0.19 0.00 0.00 3.66
86 87 9.261180 GTGGATAGTGATCGATCATCTTTTAAA 57.739 33.333 29.53 13.51 39.30 1.52
87 88 8.421002 TGTGGATAGTGATCGATCATCTTTTAA 58.579 33.333 29.53 13.82 39.30 1.52
88 89 7.951591 TGTGGATAGTGATCGATCATCTTTTA 58.048 34.615 29.53 16.88 39.30 1.52
89 90 6.820335 TGTGGATAGTGATCGATCATCTTTT 58.180 36.000 29.53 17.62 39.30 2.27
90 91 6.410942 TGTGGATAGTGATCGATCATCTTT 57.589 37.500 29.53 21.02 39.30 2.52
91 92 5.047448 CCTGTGGATAGTGATCGATCATCTT 60.047 44.000 29.53 19.85 39.30 2.40
92 93 4.462132 CCTGTGGATAGTGATCGATCATCT 59.538 45.833 29.53 26.29 39.30 2.90
93 94 4.742417 CCTGTGGATAGTGATCGATCATC 58.258 47.826 29.53 22.07 39.30 2.92
94 95 3.056250 GCCTGTGGATAGTGATCGATCAT 60.056 47.826 29.53 19.90 39.30 2.45
95 96 2.297315 GCCTGTGGATAGTGATCGATCA 59.703 50.000 23.99 23.99 32.28 2.92
96 97 2.669670 CGCCTGTGGATAGTGATCGATC 60.670 54.545 18.72 18.72 32.28 3.69
97 98 1.270826 CGCCTGTGGATAGTGATCGAT 59.729 52.381 0.00 0.00 32.28 3.59
98 99 0.668535 CGCCTGTGGATAGTGATCGA 59.331 55.000 0.00 0.00 32.28 3.59
99 100 0.941463 GCGCCTGTGGATAGTGATCG 60.941 60.000 0.00 0.00 32.28 3.69
100 101 0.104855 TGCGCCTGTGGATAGTGATC 59.895 55.000 4.18 0.00 0.00 2.92
101 102 0.179073 GTGCGCCTGTGGATAGTGAT 60.179 55.000 4.18 0.00 0.00 3.06
102 103 1.218047 GTGCGCCTGTGGATAGTGA 59.782 57.895 4.18 0.00 0.00 3.41
103 104 1.815421 GGTGCGCCTGTGGATAGTG 60.815 63.158 9.68 0.00 0.00 2.74
104 105 2.584608 GGTGCGCCTGTGGATAGT 59.415 61.111 9.68 0.00 0.00 2.12
105 106 2.203070 GGGTGCGCCTGTGGATAG 60.203 66.667 17.49 0.00 34.45 2.08
106 107 4.155733 CGGGTGCGCCTGTGGATA 62.156 66.667 17.50 0.00 36.39 2.59
118 119 4.308458 TGCGGAGGTGTTCGGGTG 62.308 66.667 0.00 0.00 0.00 4.61
119 120 4.003788 CTGCGGAGGTGTTCGGGT 62.004 66.667 0.00 0.00 0.00 5.28
132 133 2.262774 AATCTGGCCCTTCCTCTGCG 62.263 60.000 0.00 0.00 35.26 5.18
133 134 0.750911 CAATCTGGCCCTTCCTCTGC 60.751 60.000 0.00 0.00 35.26 4.26
134 135 0.622665 ACAATCTGGCCCTTCCTCTG 59.377 55.000 0.00 0.00 35.26 3.35
139 140 1.066430 TGACGTACAATCTGGCCCTTC 60.066 52.381 0.00 0.00 0.00 3.46
206 215 2.568546 TGGATTCTTCTGGGGCTCTA 57.431 50.000 0.00 0.00 0.00 2.43
267 278 3.774702 GTTCTGTCGTTCCGCCGC 61.775 66.667 0.00 0.00 0.00 6.53
268 279 3.110178 GGTTCTGTCGTTCCGCCG 61.110 66.667 0.00 0.00 0.00 6.46
269 280 2.741211 GGGTTCTGTCGTTCCGCC 60.741 66.667 0.00 0.00 0.00 6.13
270 281 3.110178 CGGGTTCTGTCGTTCCGC 61.110 66.667 0.00 0.00 34.17 5.54
271 282 1.731969 GTCGGGTTCTGTCGTTCCG 60.732 63.158 0.00 0.00 41.80 4.30
272 283 0.942884 GTGTCGGGTTCTGTCGTTCC 60.943 60.000 0.00 0.00 0.00 3.62
273 284 1.273455 CGTGTCGGGTTCTGTCGTTC 61.273 60.000 0.00 0.00 0.00 3.95
274 285 1.299620 CGTGTCGGGTTCTGTCGTT 60.300 57.895 0.00 0.00 0.00 3.85
275 286 2.333938 CGTGTCGGGTTCTGTCGT 59.666 61.111 0.00 0.00 0.00 4.34
276 287 3.103911 GCGTGTCGGGTTCTGTCG 61.104 66.667 0.00 0.00 0.00 4.35
277 288 2.028484 TGCGTGTCGGGTTCTGTC 59.972 61.111 0.00 0.00 0.00 3.51
278 289 2.279918 GTGCGTGTCGGGTTCTGT 60.280 61.111 0.00 0.00 0.00 3.41
279 290 3.403057 CGTGCGTGTCGGGTTCTG 61.403 66.667 0.00 0.00 0.00 3.02
297 308 4.501714 GGTGGCCATGCATGCACG 62.502 66.667 25.37 16.18 0.00 5.34
298 309 3.072468 AGGTGGCCATGCATGCAC 61.072 61.111 25.37 22.00 0.00 4.57
299 310 2.756691 GAGGTGGCCATGCATGCA 60.757 61.111 25.04 25.04 0.00 3.96
300 311 2.012902 GAAGAGGTGGCCATGCATGC 62.013 60.000 21.69 11.82 0.00 4.06
301 312 0.395311 AGAAGAGGTGGCCATGCATG 60.395 55.000 20.19 20.19 0.00 4.06
302 313 0.106819 GAGAAGAGGTGGCCATGCAT 60.107 55.000 9.72 0.00 0.00 3.96
319 330 2.047274 ATGTGTCGTTGGGCCGAG 60.047 61.111 0.00 0.00 37.56 4.63
322 333 3.747976 GCCATGTGTCGTTGGGCC 61.748 66.667 0.00 0.00 38.70 5.80
357 370 1.768684 AAGAGGTGGCCATGTGTCGT 61.769 55.000 9.72 0.00 0.00 4.34
358 371 0.606401 AAAGAGGTGGCCATGTGTCG 60.606 55.000 9.72 0.00 0.00 4.35
359 372 1.270550 CAAAAGAGGTGGCCATGTGTC 59.729 52.381 9.72 3.36 0.00 3.67
363 376 1.542915 CTGACAAAAGAGGTGGCCATG 59.457 52.381 9.72 3.13 0.00 3.66
364 377 1.915141 CTGACAAAAGAGGTGGCCAT 58.085 50.000 9.72 0.00 0.00 4.40
365 378 0.823356 GCTGACAAAAGAGGTGGCCA 60.823 55.000 0.00 0.00 0.00 5.36
368 381 0.178992 TGGGCTGACAAAAGAGGTGG 60.179 55.000 0.00 0.00 0.00 4.61
369 382 1.242076 CTGGGCTGACAAAAGAGGTG 58.758 55.000 0.00 0.00 0.00 4.00
370 383 0.846693 ACTGGGCTGACAAAAGAGGT 59.153 50.000 0.00 0.00 0.00 3.85
371 384 1.072965 AGACTGGGCTGACAAAAGAGG 59.927 52.381 0.00 0.00 0.00 3.69
372 385 2.224378 TGAGACTGGGCTGACAAAAGAG 60.224 50.000 0.00 0.00 0.00 2.85
374 387 2.260844 TGAGACTGGGCTGACAAAAG 57.739 50.000 0.00 0.00 0.00 2.27
375 388 2.507484 CATGAGACTGGGCTGACAAAA 58.493 47.619 0.00 0.00 0.00 2.44
377 390 0.325933 CCATGAGACTGGGCTGACAA 59.674 55.000 0.00 0.00 32.28 3.18
385 398 2.503061 CGGAGCCCATGAGACTGG 59.497 66.667 0.00 0.00 35.95 4.00
1130 1455 2.013563 GCCAAACCAGATCAGATCGCA 61.014 52.381 4.67 0.00 0.00 5.10
1132 1457 2.322355 AGCCAAACCAGATCAGATCG 57.678 50.000 4.67 0.59 0.00 3.69
1298 1642 3.773154 AGGGAGAGGGAGGGGCTC 61.773 72.222 0.00 0.00 0.00 4.70
1299 1643 4.101077 CAGGGAGAGGGAGGGGCT 62.101 72.222 0.00 0.00 0.00 5.19
1316 1663 2.511403 GGCGGGGAGGGAGAAATC 59.489 66.667 0.00 0.00 0.00 2.17
1317 1664 3.097162 GGGCGGGGAGGGAGAAAT 61.097 66.667 0.00 0.00 0.00 2.17
1325 1672 3.237741 GAGATGAGGGGCGGGGAG 61.238 72.222 0.00 0.00 0.00 4.30
1337 1684 4.797800 ATCGGATATCCAGTGTGAGATG 57.202 45.455 21.70 1.33 35.14 2.90
1340 1687 3.004839 ACGAATCGGATATCCAGTGTGAG 59.995 47.826 21.70 8.49 35.14 3.51
1348 1695 1.270094 TGCCACACGAATCGGATATCC 60.270 52.381 12.14 12.14 0.00 2.59
1374 1721 1.566018 GAGACAAACGCAGGGAACGG 61.566 60.000 0.00 0.00 34.00 4.44
1425 1772 8.744008 TCGATCGAAATTACAAATCTCTATCC 57.256 34.615 16.99 0.00 0.00 2.59
1515 1862 6.743575 AAGTGTACTGGAGTGCATAAATTC 57.256 37.500 0.70 0.00 42.31 2.17
1543 1890 5.118729 TCCCCAAATTTTAGCGGATAAGA 57.881 39.130 0.00 0.00 0.00 2.10
1567 1914 7.826260 TTTAGCAGCAAAATAAAATAGCACC 57.174 32.000 0.00 0.00 0.00 5.01
1590 1938 5.170748 GTTGGCAATGCTAAATACAGCTTT 58.829 37.500 5.40 0.00 42.30 3.51
1638 1990 7.934855 ATTAGGCTCAGCTCATAAATAATGG 57.065 36.000 0.00 0.00 36.15 3.16
1651 2003 1.028130 GCCCAGAAATTAGGCTCAGC 58.972 55.000 0.00 0.00 43.62 4.26
1665 2017 2.576832 CCAAGCACCCAAAGCCCAG 61.577 63.158 0.00 0.00 0.00 4.45
1667 2019 4.007644 GCCAAGCACCCAAAGCCC 62.008 66.667 0.00 0.00 0.00 5.19
1684 2036 4.717877 TGGGTAACATGCTAGAATCCATG 58.282 43.478 0.00 0.00 43.34 3.66
1797 2253 6.456988 GCCTACAAAATAGAACCAGTTCATCG 60.457 42.308 12.76 0.00 41.84 3.84
1805 2261 5.222048 ACCAGAAGCCTACAAAATAGAACCA 60.222 40.000 0.00 0.00 0.00 3.67
1813 2269 5.390387 ACCAATTACCAGAAGCCTACAAAA 58.610 37.500 0.00 0.00 0.00 2.44
1820 2276 3.054655 TCCACTACCAATTACCAGAAGCC 60.055 47.826 0.00 0.00 0.00 4.35
1884 2340 4.830600 GGTTGGTTGGAAGGAAATAGACAA 59.169 41.667 0.00 0.00 0.00 3.18
2010 2470 8.925700 GTCAATGTCGATGCATACATATAGAAA 58.074 33.333 14.07 0.00 36.35 2.52
2092 2555 3.210227 GGACGGAGGGAGTACTAACTAC 58.790 54.545 0.00 0.00 35.56 2.73
2102 2565 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
2103 2566 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
2104 2567 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
2106 2569 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
2107 2570 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
2108 2571 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
2109 2572 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
2110 2573 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
2112 2575 7.312154 TCCATTTTGATGACAAGTATTTTCGG 58.688 34.615 0.00 0.00 37.32 4.30
2113 2576 8.915871 ATCCATTTTGATGACAAGTATTTTCG 57.084 30.769 0.00 0.00 37.32 3.46
2166 2629 9.607333 TGGATAAAAGAGGATGTATCTAGATGT 57.393 33.333 15.79 1.25 0.00 3.06
2175 2638 9.919416 TCATCAAAATGGATAAAAGAGGATGTA 57.081 29.630 0.00 0.00 33.42 2.29
2176 2639 8.689972 GTCATCAAAATGGATAAAAGAGGATGT 58.310 33.333 0.00 0.00 33.42 3.06
2177 2640 8.689061 TGTCATCAAAATGGATAAAAGAGGATG 58.311 33.333 0.00 0.00 33.42 3.51
2178 2641 8.827832 TGTCATCAAAATGGATAAAAGAGGAT 57.172 30.769 0.00 0.00 33.42 3.24
2179 2642 8.648698 TTGTCATCAAAATGGATAAAAGAGGA 57.351 30.769 0.00 0.00 33.42 3.71
2180 2643 8.526147 ACTTGTCATCAAAATGGATAAAAGAGG 58.474 33.333 0.00 0.00 33.42 3.69
2188 2651 7.975616 CCGAAAATACTTGTCATCAAAATGGAT 59.024 33.333 0.00 0.00 33.42 3.41
2189 2652 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
2190 2653 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
2191 2654 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
2192 2655 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
2193 2656 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
2194 2657 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
2195 2658 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
2196 2659 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
2197 2660 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
2198 2661 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
2199 2662 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
2200 2663 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
2201 2664 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
2202 2665 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
2203 2666 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
2204 2667 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
2205 2668 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
2206 2669 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
2207 2670 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
2208 2671 1.631405 TTACTCCCTCCGTCCGAAAA 58.369 50.000 0.00 0.00 0.00 2.29
2209 2672 1.856629 ATTACTCCCTCCGTCCGAAA 58.143 50.000 0.00 0.00 0.00 3.46
2210 2673 1.753073 GAATTACTCCCTCCGTCCGAA 59.247 52.381 0.00 0.00 0.00 4.30
2211 2674 1.341285 TGAATTACTCCCTCCGTCCGA 60.341 52.381 0.00 0.00 0.00 4.55
2212 2675 1.108776 TGAATTACTCCCTCCGTCCG 58.891 55.000 0.00 0.00 0.00 4.79
2213 2676 1.829222 TGTGAATTACTCCCTCCGTCC 59.171 52.381 0.00 0.00 0.00 4.79
2214 2677 3.385111 AGATGTGAATTACTCCCTCCGTC 59.615 47.826 0.00 0.00 0.00 4.79
2215 2678 3.375699 AGATGTGAATTACTCCCTCCGT 58.624 45.455 0.00 0.00 0.00 4.69
2216 2679 4.408182 AAGATGTGAATTACTCCCTCCG 57.592 45.455 0.00 0.00 0.00 4.63
2217 2680 6.127619 CCAAAAAGATGTGAATTACTCCCTCC 60.128 42.308 0.00 0.00 0.00 4.30
2218 2681 6.127619 CCCAAAAAGATGTGAATTACTCCCTC 60.128 42.308 0.00 0.00 0.00 4.30
2219 2682 5.716703 CCCAAAAAGATGTGAATTACTCCCT 59.283 40.000 0.00 0.00 0.00 4.20
2220 2683 5.624509 GCCCAAAAAGATGTGAATTACTCCC 60.625 44.000 0.00 0.00 0.00 4.30
2221 2684 5.047377 TGCCCAAAAAGATGTGAATTACTCC 60.047 40.000 0.00 0.00 0.00 3.85
2222 2685 6.024552 TGCCCAAAAAGATGTGAATTACTC 57.975 37.500 0.00 0.00 0.00 2.59
2228 2691 5.538053 TGTCTATTGCCCAAAAAGATGTGAA 59.462 36.000 1.43 0.00 0.00 3.18
2258 2721 7.539712 AGGAAGTTGTGAAATATGTATCACG 57.460 36.000 10.31 0.00 46.99 4.35
2368 2881 3.746492 ACAAAATAGGTGAGCAGTCGTTC 59.254 43.478 0.00 0.00 0.00 3.95
2369 2882 3.740115 ACAAAATAGGTGAGCAGTCGTT 58.260 40.909 0.00 0.00 0.00 3.85
2371 2884 4.213270 TCAAACAAAATAGGTGAGCAGTCG 59.787 41.667 0.00 0.00 0.00 4.18
2382 2895 9.368674 TGCACATAATGGATTCAAACAAAATAG 57.631 29.630 0.00 0.00 0.00 1.73
2465 2978 0.031857 CAAACGGGTGCTTGCATTGA 59.968 50.000 0.00 0.00 0.00 2.57
2556 3076 6.323739 TCAAGCCAAAAAGTCTACCTGAAATT 59.676 34.615 0.00 0.00 0.00 1.82
2716 3236 6.353404 TCGCCATCATCATATTGGTAACTA 57.647 37.500 0.00 0.00 32.90 2.24
2917 3437 0.765510 AACCTGACCCTGAACCTGAC 59.234 55.000 0.00 0.00 0.00 3.51
2929 3449 1.416401 TCCTTGGACACTGAACCTGAC 59.584 52.381 0.00 0.00 0.00 3.51
3078 3601 1.351017 GACCAACCTCCAGTGATTCCA 59.649 52.381 0.00 0.00 0.00 3.53
3170 3717 1.076438 GGGAGGATTATTGGAGGGGG 58.924 60.000 0.00 0.00 0.00 5.40
3315 3863 2.260434 CGACCGACCGACCACATT 59.740 61.111 0.00 0.00 0.00 2.71
3441 3992 5.099042 AGATGGATGTAACAACCTACCAC 57.901 43.478 0.00 0.00 0.00 4.16
3470 4022 4.494484 CGTTCCCCCATTTCATTTTCTTC 58.506 43.478 0.00 0.00 0.00 2.87
3529 4084 2.159841 CCGAGCACTAACAACAACATCG 60.160 50.000 0.00 0.00 0.00 3.84
3534 4089 1.541670 GGGACCGAGCACTAACAACAA 60.542 52.381 0.00 0.00 0.00 2.83
3541 4096 0.834687 AAACCAGGGACCGAGCACTA 60.835 55.000 0.00 0.00 0.00 2.74
3556 4111 4.024133 GGACCATTCAAAATTGTGCAAACC 60.024 41.667 0.00 0.00 0.00 3.27
3566 4121 5.755849 AGACGATTAGGGACCATTCAAAAT 58.244 37.500 0.00 0.00 0.00 1.82
3580 4135 5.643777 ACAAAAACCATCCAGAGACGATTAG 59.356 40.000 0.00 0.00 0.00 1.73
3582 4137 4.398319 ACAAAAACCATCCAGAGACGATT 58.602 39.130 0.00 0.00 0.00 3.34
3602 4184 3.056962 TCAGAAAAACTTGTGCAGCAACA 60.057 39.130 0.00 0.00 32.90 3.33
3607 4189 3.100817 CACGTCAGAAAAACTTGTGCAG 58.899 45.455 0.00 0.00 0.00 4.41
3610 4192 3.405170 AGCACGTCAGAAAAACTTGTG 57.595 42.857 0.00 0.00 0.00 3.33
3611 4193 3.311596 GGTAGCACGTCAGAAAAACTTGT 59.688 43.478 0.00 0.00 0.00 3.16
3619 4201 1.000506 GGTTCAGGTAGCACGTCAGAA 59.999 52.381 0.00 0.00 0.00 3.02
3621 4203 0.603569 AGGTTCAGGTAGCACGTCAG 59.396 55.000 0.00 0.00 0.00 3.51
3625 4207 1.741770 GGCAGGTTCAGGTAGCACG 60.742 63.158 0.00 0.00 0.00 5.34
3630 4212 1.906574 CTTACTGGGCAGGTTCAGGTA 59.093 52.381 0.00 0.00 35.47 3.08
3631 4213 0.693049 CTTACTGGGCAGGTTCAGGT 59.307 55.000 0.00 0.00 35.47 4.00
3632 4214 0.678048 GCTTACTGGGCAGGTTCAGG 60.678 60.000 0.00 0.00 35.47 3.86
3633 4215 0.326264 AGCTTACTGGGCAGGTTCAG 59.674 55.000 0.00 0.00 37.07 3.02
3634 4216 0.036732 CAGCTTACTGGGCAGGTTCA 59.963 55.000 0.00 0.00 40.48 3.18
3635 4217 1.308783 GCAGCTTACTGGGCAGGTTC 61.309 60.000 0.00 0.00 44.63 3.62
3636 4218 1.303643 GCAGCTTACTGGGCAGGTT 60.304 57.895 0.00 0.00 44.63 3.50
3637 4219 2.352805 GCAGCTTACTGGGCAGGT 59.647 61.111 0.00 0.00 44.63 4.00
3638 4220 2.042831 GTGCAGCTTACTGGGCAGG 61.043 63.158 0.00 0.00 44.63 4.85
3639 4221 0.890542 TTGTGCAGCTTACTGGGCAG 60.891 55.000 0.00 0.00 44.63 4.85
3640 4222 0.890542 CTTGTGCAGCTTACTGGGCA 60.891 55.000 0.00 0.00 44.63 5.36
3641 4223 0.890996 ACTTGTGCAGCTTACTGGGC 60.891 55.000 0.00 0.00 44.63 5.36
3642 4224 1.609208 AACTTGTGCAGCTTACTGGG 58.391 50.000 0.00 0.00 44.63 4.45
3643 4225 3.715628 AAAACTTGTGCAGCTTACTGG 57.284 42.857 0.00 0.00 44.63 4.00
3645 4227 4.640201 TCAGAAAAACTTGTGCAGCTTACT 59.360 37.500 0.00 0.00 0.00 2.24
3646 4228 4.920376 TCAGAAAAACTTGTGCAGCTTAC 58.080 39.130 0.00 0.00 0.00 2.34
3647 4229 5.125417 ACTTCAGAAAAACTTGTGCAGCTTA 59.875 36.000 0.00 0.00 0.00 3.09
3648 4230 4.082026 ACTTCAGAAAAACTTGTGCAGCTT 60.082 37.500 0.00 0.00 0.00 3.74
3649 4231 3.445096 ACTTCAGAAAAACTTGTGCAGCT 59.555 39.130 0.00 0.00 0.00 4.24
3650 4232 3.549070 CACTTCAGAAAAACTTGTGCAGC 59.451 43.478 0.00 0.00 0.00 5.25
3651 4233 3.549070 GCACTTCAGAAAAACTTGTGCAG 59.451 43.478 14.85 0.00 42.09 4.41
3652 4234 3.193267 AGCACTTCAGAAAAACTTGTGCA 59.807 39.130 19.55 0.00 43.44 4.57
3653 4235 3.774066 AGCACTTCAGAAAAACTTGTGC 58.226 40.909 12.77 12.77 42.44 4.57
3654 4236 5.066505 AGGTAGCACTTCAGAAAAACTTGTG 59.933 40.000 0.00 0.00 0.00 3.33
3655 4237 5.066505 CAGGTAGCACTTCAGAAAAACTTGT 59.933 40.000 0.00 0.00 0.00 3.16
3656 4238 5.296780 TCAGGTAGCACTTCAGAAAAACTTG 59.703 40.000 0.00 0.00 0.00 3.16
3657 4239 5.437060 TCAGGTAGCACTTCAGAAAAACTT 58.563 37.500 0.00 0.00 0.00 2.66
3658 4240 5.036117 TCAGGTAGCACTTCAGAAAAACT 57.964 39.130 0.00 0.00 0.00 2.66
3659 4241 5.505819 GGTTCAGGTAGCACTTCAGAAAAAC 60.506 44.000 0.00 0.00 0.00 2.43
3660 4242 4.578928 GGTTCAGGTAGCACTTCAGAAAAA 59.421 41.667 0.00 0.00 0.00 1.94
3661 4243 4.134563 GGTTCAGGTAGCACTTCAGAAAA 58.865 43.478 0.00 0.00 0.00 2.29
3662 4244 3.391296 AGGTTCAGGTAGCACTTCAGAAA 59.609 43.478 0.00 0.00 0.00 2.52
3663 4245 2.972713 AGGTTCAGGTAGCACTTCAGAA 59.027 45.455 0.00 0.00 0.00 3.02
3664 4246 2.300152 CAGGTTCAGGTAGCACTTCAGA 59.700 50.000 0.00 0.00 0.00 3.27
3665 4247 2.693069 CAGGTTCAGGTAGCACTTCAG 58.307 52.381 0.00 0.00 0.00 3.02
3666 4248 1.270839 GCAGGTTCAGGTAGCACTTCA 60.271 52.381 0.00 0.00 0.00 3.02
3667 4249 1.443802 GCAGGTTCAGGTAGCACTTC 58.556 55.000 0.00 0.00 0.00 3.01
3668 4250 0.036875 GGCAGGTTCAGGTAGCACTT 59.963 55.000 0.00 0.00 0.00 3.16
3669 4251 1.679898 GGCAGGTTCAGGTAGCACT 59.320 57.895 0.00 0.00 0.00 4.40
3670 4252 1.377333 GGGCAGGTTCAGGTAGCAC 60.377 63.158 0.00 0.00 0.00 4.40
3671 4253 1.841302 CTGGGCAGGTTCAGGTAGCA 61.841 60.000 0.00 0.00 0.00 3.49
3672 4254 1.078143 CTGGGCAGGTTCAGGTAGC 60.078 63.158 0.00 0.00 0.00 3.58
3673 4255 0.250513 GACTGGGCAGGTTCAGGTAG 59.749 60.000 0.00 0.00 35.47 3.18
3674 4256 0.472925 TGACTGGGCAGGTTCAGGTA 60.473 55.000 0.00 0.00 35.47 3.08
3675 4257 1.770110 TGACTGGGCAGGTTCAGGT 60.770 57.895 0.00 0.00 35.47 4.00
3676 4258 1.002868 CTGACTGGGCAGGTTCAGG 60.003 63.158 0.00 0.00 35.47 3.86
3677 4259 1.673665 GCTGACTGGGCAGGTTCAG 60.674 63.158 5.55 0.72 35.71 3.02
3678 4260 2.149383 AGCTGACTGGGCAGGTTCA 61.149 57.895 1.94 0.00 43.51 3.18
3679 4261 1.673665 CAGCTGACTGGGCAGGTTC 60.674 63.158 8.42 0.00 43.51 3.62
3680 4262 2.433446 CAGCTGACTGGGCAGGTT 59.567 61.111 8.42 0.00 43.51 3.50
3681 4263 4.341783 GCAGCTGACTGGGCAGGT 62.342 66.667 20.43 1.94 46.63 4.00
3682 4264 3.640257 ATGCAGCTGACTGGGCAGG 62.640 63.158 20.43 0.00 44.63 4.85
3683 4265 2.045242 ATGCAGCTGACTGGGCAG 60.045 61.111 20.43 0.00 44.63 4.85
3684 4266 2.045634 GATGCAGCTGACTGGGCA 60.046 61.111 20.43 7.35 44.63 5.36
3685 4267 3.200593 CGATGCAGCTGACTGGGC 61.201 66.667 20.43 0.09 44.63 5.36
3686 4268 3.200593 GCGATGCAGCTGACTGGG 61.201 66.667 20.43 2.73 44.63 4.45
3687 4269 2.036571 TTGCGATGCAGCTGACTGG 61.037 57.895 20.43 5.73 44.63 4.00
3689 4271 3.571119 GTTGCGATGCAGCTGACT 58.429 55.556 20.43 2.37 40.61 3.41
3694 4276 2.533391 GAACCCAGTTGCGATGCAGC 62.533 60.000 0.00 0.00 40.61 5.25
3695 4277 1.236616 TGAACCCAGTTGCGATGCAG 61.237 55.000 0.00 0.00 40.61 4.41
3696 4278 1.228094 TGAACCCAGTTGCGATGCA 60.228 52.632 0.00 0.00 36.47 3.96
3697 4279 1.210155 GTGAACCCAGTTGCGATGC 59.790 57.895 0.00 0.00 0.00 3.91
3698 4280 0.798776 GAGTGAACCCAGTTGCGATG 59.201 55.000 0.00 0.00 0.00 3.84
3699 4281 0.321653 GGAGTGAACCCAGTTGCGAT 60.322 55.000 0.00 0.00 0.00 4.58
3700 4282 1.070786 GGAGTGAACCCAGTTGCGA 59.929 57.895 0.00 0.00 0.00 5.10
3701 4283 2.317609 CGGAGTGAACCCAGTTGCG 61.318 63.158 0.00 0.00 0.00 4.85
3702 4284 2.617274 GCGGAGTGAACCCAGTTGC 61.617 63.158 0.00 0.00 0.00 4.17
3703 4285 1.966451 GGCGGAGTGAACCCAGTTG 60.966 63.158 0.00 0.00 0.00 3.16
3704 4286 2.430367 GGCGGAGTGAACCCAGTT 59.570 61.111 0.00 0.00 0.00 3.16
3705 4287 4.003788 CGGCGGAGTGAACCCAGT 62.004 66.667 0.00 0.00 0.00 4.00
3706 4288 3.691342 TCGGCGGAGTGAACCCAG 61.691 66.667 7.21 0.00 0.00 4.45
3707 4289 3.998672 GTCGGCGGAGTGAACCCA 61.999 66.667 7.21 0.00 0.00 4.51
3708 4290 3.934391 CTGTCGGCGGAGTGAACCC 62.934 68.421 7.21 0.00 0.00 4.11
3709 4291 2.432628 CTGTCGGCGGAGTGAACC 60.433 66.667 7.21 0.00 0.00 3.62
3710 4292 2.432628 CCTGTCGGCGGAGTGAAC 60.433 66.667 7.21 0.00 0.00 3.18
3720 4302 1.592669 CTTCGCATAGGCCTGTCGG 60.593 63.158 17.99 2.33 36.38 4.79
3721 4303 0.384309 TACTTCGCATAGGCCTGTCG 59.616 55.000 17.99 15.79 36.38 4.35
3722 4304 1.538419 GGTACTTCGCATAGGCCTGTC 60.538 57.143 17.99 2.81 36.38 3.51
3723 4305 0.464452 GGTACTTCGCATAGGCCTGT 59.536 55.000 17.99 5.57 36.38 4.00
3724 4306 0.249911 GGGTACTTCGCATAGGCCTG 60.250 60.000 17.99 0.25 36.38 4.85
3725 4307 0.689745 TGGGTACTTCGCATAGGCCT 60.690 55.000 11.78 11.78 36.38 5.19
3733 4315 1.612676 AAAAGGGTTGGGTACTTCGC 58.387 50.000 0.00 0.00 0.00 4.70
3766 4348 9.148104 GAACGTCACTATTAATAAAGGTCACTT 57.852 33.333 0.00 0.00 38.99 3.16
3800 4382 4.993905 GCCATTGGGTGACACTATAAAAC 58.006 43.478 5.39 0.00 36.17 2.43
3856 4439 4.911610 GGAACATTGAAGATGAAACACACG 59.088 41.667 0.00 0.00 0.00 4.49
3857 4440 6.076981 AGGAACATTGAAGATGAAACACAC 57.923 37.500 0.00 0.00 0.00 3.82
3865 4448 5.611796 TGAACGAAGGAACATTGAAGATG 57.388 39.130 0.00 0.00 0.00 2.90
3868 4451 4.455533 TCCATGAACGAAGGAACATTGAAG 59.544 41.667 0.00 0.00 0.00 3.02
3869 4452 4.393834 TCCATGAACGAAGGAACATTGAA 58.606 39.130 0.00 0.00 0.00 2.69
3894 4477 2.170187 GTCAGAGAGATCAATGCCTGGT 59.830 50.000 0.00 0.00 0.00 4.00
3895 4478 2.435069 AGTCAGAGAGATCAATGCCTGG 59.565 50.000 0.00 0.00 0.00 4.45
3900 4483 4.484236 GGCGATAGTCAGAGAGATCAATG 58.516 47.826 0.00 0.00 43.13 2.82
3930 4513 2.632377 CCATTGCGATGGTAGTGAAGT 58.368 47.619 23.23 0.00 46.48 3.01
3940 4523 2.711311 CGAGTGCCCATTGCGATG 59.289 61.111 6.99 6.99 45.60 3.84
3945 4528 3.197790 CTCGCCGAGTGCCCATTG 61.198 66.667 5.82 0.00 36.24 2.82
3957 4540 0.387878 CATAGATCGGACAGCTCGCC 60.388 60.000 0.00 0.00 0.00 5.54
3958 4541 0.312416 ACATAGATCGGACAGCTCGC 59.688 55.000 0.00 0.00 0.00 5.03
3959 4542 2.389059 CAACATAGATCGGACAGCTCG 58.611 52.381 0.00 0.00 0.00 5.03
3960 4543 2.131183 GCAACATAGATCGGACAGCTC 58.869 52.381 0.00 0.00 0.00 4.09
3961 4544 1.759445 AGCAACATAGATCGGACAGCT 59.241 47.619 0.00 0.00 0.00 4.24
3962 4545 2.231215 AGCAACATAGATCGGACAGC 57.769 50.000 0.00 0.00 0.00 4.40
3963 4546 3.738282 GCTAAGCAACATAGATCGGACAG 59.262 47.826 0.00 0.00 0.00 3.51
3964 4547 3.717707 GCTAAGCAACATAGATCGGACA 58.282 45.455 0.00 0.00 0.00 4.02
3975 4558 4.401519 AGAGGAATAGTACGCTAAGCAACA 59.598 41.667 0.00 0.00 0.00 3.33
3986 4569 5.705905 ACCTTGTTGCAAAGAGGAATAGTAC 59.294 40.000 27.34 3.27 34.77 2.73
4023 4607 9.462174 CATGAAAACAATACTCTACTTGCAAAA 57.538 29.630 0.00 0.00 0.00 2.44
4060 4644 9.614792 AGTCACTTTCTAAAACAATACTCTTGT 57.385 29.630 0.00 0.00 0.00 3.16
4065 4649 8.989980 GCAGTAGTCACTTTCTAAAACAATACT 58.010 33.333 0.00 0.00 30.46 2.12
4066 4650 8.770828 TGCAGTAGTCACTTTCTAAAACAATAC 58.229 33.333 0.00 0.00 30.46 1.89
4067 4651 8.896320 TGCAGTAGTCACTTTCTAAAACAATA 57.104 30.769 0.00 0.00 30.46 1.90
4068 4652 7.801716 TGCAGTAGTCACTTTCTAAAACAAT 57.198 32.000 0.00 0.00 30.46 2.71
4069 4653 7.618502 TTGCAGTAGTCACTTTCTAAAACAA 57.381 32.000 0.00 0.00 30.46 2.83
4070 4654 7.618502 TTTGCAGTAGTCACTTTCTAAAACA 57.381 32.000 0.00 0.00 30.46 2.83
4071 4655 7.644157 CCTTTTGCAGTAGTCACTTTCTAAAAC 59.356 37.037 0.00 0.00 30.46 2.43
4072 4656 7.554835 TCCTTTTGCAGTAGTCACTTTCTAAAA 59.445 33.333 0.00 0.00 30.46 1.52
4073 4657 7.051623 TCCTTTTGCAGTAGTCACTTTCTAAA 58.948 34.615 0.00 0.00 30.46 1.85
4074 4658 6.588204 TCCTTTTGCAGTAGTCACTTTCTAA 58.412 36.000 0.00 0.00 30.46 2.10
4075 4659 6.169557 TCCTTTTGCAGTAGTCACTTTCTA 57.830 37.500 0.00 0.00 30.46 2.10
4076 4660 5.036117 TCCTTTTGCAGTAGTCACTTTCT 57.964 39.130 0.00 0.00 30.46 2.52
4077 4661 4.319839 GCTCCTTTTGCAGTAGTCACTTTC 60.320 45.833 0.00 0.00 30.46 2.62
4078 4662 3.565902 GCTCCTTTTGCAGTAGTCACTTT 59.434 43.478 0.00 0.00 30.46 2.66
4079 4663 3.142174 GCTCCTTTTGCAGTAGTCACTT 58.858 45.455 0.00 0.00 30.46 3.16
4080 4664 2.551071 GGCTCCTTTTGCAGTAGTCACT 60.551 50.000 0.00 0.00 34.42 3.41
4081 4665 1.807142 GGCTCCTTTTGCAGTAGTCAC 59.193 52.381 0.00 0.00 0.00 3.67
4082 4666 1.699634 AGGCTCCTTTTGCAGTAGTCA 59.300 47.619 0.00 0.00 0.00 3.41
4083 4667 2.481289 AGGCTCCTTTTGCAGTAGTC 57.519 50.000 0.00 0.00 0.00 2.59
4084 4668 2.158608 ACAAGGCTCCTTTTGCAGTAGT 60.159 45.455 0.00 0.00 33.42 2.73
4085 4669 2.508526 ACAAGGCTCCTTTTGCAGTAG 58.491 47.619 0.00 0.00 33.42 2.57
4086 4670 2.656947 ACAAGGCTCCTTTTGCAGTA 57.343 45.000 0.00 0.00 33.42 2.74
4087 4671 1.780503 AACAAGGCTCCTTTTGCAGT 58.219 45.000 0.00 0.00 33.42 4.40
4088 4672 2.101249 TGAAACAAGGCTCCTTTTGCAG 59.899 45.455 0.00 0.00 33.42 4.41
4089 4673 2.101249 CTGAAACAAGGCTCCTTTTGCA 59.899 45.455 0.00 2.22 33.42 4.08
4090 4674 2.362077 TCTGAAACAAGGCTCCTTTTGC 59.638 45.455 0.00 0.00 33.42 3.68
4091 4675 4.654091 TTCTGAAACAAGGCTCCTTTTG 57.346 40.909 0.00 0.00 33.42 2.44
4092 4676 5.011090 GTTTCTGAAACAAGGCTCCTTTT 57.989 39.130 24.32 0.00 41.04 2.27
4093 4677 4.655762 GTTTCTGAAACAAGGCTCCTTT 57.344 40.909 24.32 0.00 41.04 3.11
4104 4688 3.621715 AGTCACCGTTCTGTTTCTGAAAC 59.378 43.478 22.94 22.94 41.73 2.78
4105 4689 3.869065 AGTCACCGTTCTGTTTCTGAAA 58.131 40.909 0.00 0.00 0.00 2.69
4106 4690 3.536956 AGTCACCGTTCTGTTTCTGAA 57.463 42.857 0.00 0.00 0.00 3.02
4107 4691 3.635373 AGTAGTCACCGTTCTGTTTCTGA 59.365 43.478 0.00 0.00 0.00 3.27
4108 4692 3.736252 CAGTAGTCACCGTTCTGTTTCTG 59.264 47.826 0.00 0.00 0.00 3.02
4109 4693 3.383825 ACAGTAGTCACCGTTCTGTTTCT 59.616 43.478 0.00 0.00 36.17 2.52
4110 4694 3.714391 ACAGTAGTCACCGTTCTGTTTC 58.286 45.455 0.00 0.00 36.17 2.78
4111 4695 3.814005 ACAGTAGTCACCGTTCTGTTT 57.186 42.857 0.00 0.00 36.17 2.83
4112 4696 4.098349 TGTTACAGTAGTCACCGTTCTGTT 59.902 41.667 0.00 0.00 39.54 3.16
4113 4697 3.633525 TGTTACAGTAGTCACCGTTCTGT 59.366 43.478 0.00 0.00 41.32 3.41
4114 4698 4.233123 TGTTACAGTAGTCACCGTTCTG 57.767 45.455 0.00 0.00 0.00 3.02
4115 4699 4.581824 TCTTGTTACAGTAGTCACCGTTCT 59.418 41.667 0.00 0.00 0.00 3.01
4116 4700 4.863491 TCTTGTTACAGTAGTCACCGTTC 58.137 43.478 0.00 0.00 0.00 3.95
4117 4701 4.795308 GCTCTTGTTACAGTAGTCACCGTT 60.795 45.833 0.00 0.00 0.00 4.44
4118 4702 3.305199 GCTCTTGTTACAGTAGTCACCGT 60.305 47.826 0.00 0.00 0.00 4.83
4119 4703 3.057456 AGCTCTTGTTACAGTAGTCACCG 60.057 47.826 0.00 0.00 0.00 4.94
4120 4704 4.522722 AGCTCTTGTTACAGTAGTCACC 57.477 45.455 0.00 0.00 0.00 4.02
4121 4705 5.753921 ACAAAGCTCTTGTTACAGTAGTCAC 59.246 40.000 8.03 0.00 0.00 3.67
4122 4706 5.914033 ACAAAGCTCTTGTTACAGTAGTCA 58.086 37.500 8.03 0.00 0.00 3.41
4123 4707 6.846325 AACAAAGCTCTTGTTACAGTAGTC 57.154 37.500 19.03 0.00 40.47 2.59
4124 4708 6.821665 TGAAACAAAGCTCTTGTTACAGTAGT 59.178 34.615 20.08 8.76 41.30 2.73
4125 4709 7.246674 TGAAACAAAGCTCTTGTTACAGTAG 57.753 36.000 20.08 0.00 41.30 2.57
4126 4710 7.801716 ATGAAACAAAGCTCTTGTTACAGTA 57.198 32.000 20.08 10.36 41.30 2.74
4127 4711 6.699575 ATGAAACAAAGCTCTTGTTACAGT 57.300 33.333 20.08 10.03 41.30 3.55
4128 4712 8.958043 GTTTATGAAACAAAGCTCTTGTTACAG 58.042 33.333 20.08 0.00 41.30 2.74
4129 4713 8.850454 GTTTATGAAACAAAGCTCTTGTTACA 57.150 30.769 20.08 8.86 41.30 2.41
4143 4727 4.986034 AGTCATCGACGTGTTTATGAAACA 59.014 37.500 0.00 0.69 42.08 2.83
4144 4728 5.511088 AGTCATCGACGTGTTTATGAAAC 57.489 39.130 0.00 0.00 38.51 2.78
4145 4729 7.671827 CAATAGTCATCGACGTGTTTATGAAA 58.328 34.615 0.00 0.00 37.67 2.69
4146 4730 6.237728 GCAATAGTCATCGACGTGTTTATGAA 60.238 38.462 0.00 0.00 37.67 2.57
4147 4731 5.231357 GCAATAGTCATCGACGTGTTTATGA 59.769 40.000 0.00 0.00 37.67 2.15
4148 4732 5.005299 TGCAATAGTCATCGACGTGTTTATG 59.995 40.000 0.00 0.00 37.67 1.90
4149 4733 5.106442 TGCAATAGTCATCGACGTGTTTAT 58.894 37.500 0.00 0.00 37.67 1.40
4150 4734 4.487019 TGCAATAGTCATCGACGTGTTTA 58.513 39.130 0.00 0.00 37.67 2.01
4151 4735 3.322369 TGCAATAGTCATCGACGTGTTT 58.678 40.909 0.00 0.00 37.67 2.83
4152 4736 2.954316 TGCAATAGTCATCGACGTGTT 58.046 42.857 0.00 0.00 37.67 3.32
4153 4737 2.647529 TGCAATAGTCATCGACGTGT 57.352 45.000 0.00 0.00 37.67 4.49
4154 4738 2.666022 TGTTGCAATAGTCATCGACGTG 59.334 45.455 0.59 0.00 37.67 4.49
4155 4739 2.954316 TGTTGCAATAGTCATCGACGT 58.046 42.857 0.59 0.00 37.67 4.34
4156 4740 3.612423 TCTTGTTGCAATAGTCATCGACG 59.388 43.478 0.59 0.00 37.67 5.12
4157 4741 4.493220 GCTCTTGTTGCAATAGTCATCGAC 60.493 45.833 0.59 0.00 0.00 4.20
4158 4742 3.618594 GCTCTTGTTGCAATAGTCATCGA 59.381 43.478 0.59 0.00 0.00 3.59
4159 4743 3.620374 AGCTCTTGTTGCAATAGTCATCG 59.380 43.478 0.59 0.00 0.00 3.84
4160 4744 5.557891 AAGCTCTTGTTGCAATAGTCATC 57.442 39.130 0.59 0.00 0.00 2.92
4161 4745 5.972107 AAAGCTCTTGTTGCAATAGTCAT 57.028 34.783 0.59 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.