Multiple sequence alignment - TraesCS3D01G484500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G484500 chr3D 100.000 5996 0 0 1 5996 581529150 581523155 0.000000e+00 11073.0
1 TraesCS3D01G484500 chr3D 93.734 782 42 5 3213 3993 581456081 581455306 0.000000e+00 1166.0
2 TraesCS3D01G484500 chr3D 87.303 890 63 28 4109 4957 581448109 581447229 0.000000e+00 972.0
3 TraesCS3D01G484500 chr3D 80.167 600 71 22 4175 4737 581482813 581482225 7.240000e-109 405.0
4 TraesCS3D01G484500 chr3D 94.904 157 5 2 4951 5105 581431585 581431430 6.000000e-60 243.0
5 TraesCS3D01G484500 chr3D 94.000 100 6 0 4009 4108 581454067 581453968 1.040000e-32 152.0
6 TraesCS3D01G484500 chr3D 92.537 67 5 0 4839 4905 581480448 581480382 4.950000e-16 97.1
7 TraesCS3D01G484500 chr3D 86.022 93 8 2 5130 5217 581480346 581480254 1.780000e-15 95.3
8 TraesCS3D01G484500 chr3D 92.063 63 5 0 5734 5796 581507696 581507634 8.280000e-14 89.8
9 TraesCS3D01G484500 chr3A 93.258 5310 215 61 1 5217 716557744 716563003 0.000000e+00 7690.0
10 TraesCS3D01G484500 chr3A 94.737 133 6 1 5674 5806 716563571 716563702 7.880000e-49 206.0
11 TraesCS3D01G484500 chr3B 92.023 4676 211 68 779 5373 776552809 776557403 0.000000e+00 6420.0
12 TraesCS3D01G484500 chr3B 94.754 610 29 3 3213 3821 776866155 776866762 0.000000e+00 946.0
13 TraesCS3D01G484500 chr3B 86.490 866 88 23 4109 4957 776946894 776947747 0.000000e+00 924.0
14 TraesCS3D01G484500 chr3B 95.251 379 16 1 3340 3718 776584735 776585111 3.090000e-167 599.0
15 TraesCS3D01G484500 chr3B 77.618 764 104 29 4175 4894 776824897 776825637 9.360000e-108 401.0
16 TraesCS3D01G484500 chr3B 77.487 764 105 29 4175 4894 776787561 776788301 4.350000e-106 396.0
17 TraesCS3D01G484500 chr3B 92.857 266 10 3 5549 5806 776557747 776558011 1.580000e-100 377.0
18 TraesCS3D01G484500 chr3B 94.000 100 6 0 4009 4108 776868080 776868179 1.040000e-32 152.0
19 TraesCS3D01G484500 chr3B 83.088 136 10 7 5094 5217 776788297 776788431 1.770000e-20 111.0
20 TraesCS3D01G484500 chr3B 83.962 106 10 4 5119 5219 776954203 776954306 1.780000e-15 95.3
21 TraesCS3D01G484500 chr3B 100.000 34 0 0 4951 4984 776949663 776949696 5.020000e-06 63.9
22 TraesCS3D01G484500 chr3B 100.000 29 0 0 5434 5462 777000671 777000699 3.000000e-03 54.7
23 TraesCS3D01G484500 chr3B 100.000 28 0 0 5434 5461 776786367 776786394 1.100000e-02 52.8
24 TraesCS3D01G484500 chr3B 100.000 28 0 0 5434 5461 776823703 776823730 1.100000e-02 52.8
25 TraesCS3D01G484500 chr1D 93.889 180 11 0 5817 5996 338934840 338935019 7.660000e-69 272.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G484500 chr3D 581523155 581529150 5995 True 11073.00 11073 100.0000 1 5996 1 chr3D.!!$R4 5995
1 TraesCS3D01G484500 chr3D 581447229 581448109 880 True 972.00 972 87.3030 4109 4957 1 chr3D.!!$R2 848
2 TraesCS3D01G484500 chr3D 581453968 581456081 2113 True 659.00 1166 93.8670 3213 4108 2 chr3D.!!$R5 895
3 TraesCS3D01G484500 chr3A 716557744 716563702 5958 False 3948.00 7690 93.9975 1 5806 2 chr3A.!!$F1 5805
4 TraesCS3D01G484500 chr3B 776552809 776558011 5202 False 3398.50 6420 92.4400 779 5806 2 chr3B.!!$F4 5027
5 TraesCS3D01G484500 chr3B 776866155 776868179 2024 False 549.00 946 94.3770 3213 4108 2 chr3B.!!$F7 895
6 TraesCS3D01G484500 chr3B 776946894 776949696 2802 False 493.95 924 93.2450 4109 4984 2 chr3B.!!$F8 875
7 TraesCS3D01G484500 chr3B 776823703 776825637 1934 False 226.90 401 88.8090 4175 5461 2 chr3B.!!$F6 1286

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
221 222 0.034616 CGCTCCATCCTTCTCATCCC 59.965 60.000 0.00 0.0 0.00 3.85 F
362 372 0.179097 GCCCTTCTCTTCTAGCACGG 60.179 60.000 0.00 0.0 0.00 4.94 F
567 583 1.166531 ACAGAGCCTCCGTTGCAAAC 61.167 55.000 0.00 0.0 45.31 2.93 F
1616 1696 1.004044 ACCCCTGCTCTGTTTCAGATG 59.996 52.381 0.00 0.0 39.92 2.90 F
2832 2926 2.094130 GCCCCAGTCTTATAGGCGATAC 60.094 54.545 0.00 0.0 33.18 2.24 F
4647 6058 0.163788 CGGTAGTTTGCGCTTCACAG 59.836 55.000 9.73 0.0 0.00 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1482 1553 0.165944 AGCGCAATTCAACGTAGCAC 59.834 50.000 11.47 0.00 0.00 4.40 R
1597 1677 1.004044 ACATCTGAAACAGAGCAGGGG 59.996 52.381 7.50 0.00 44.08 4.79 R
1752 1833 1.472878 TGCTAGTCACCGACACATCTC 59.527 52.381 0.00 0.00 34.60 2.75 R
3322 3423 0.613853 AGTACGCACTAAGCCTCCCA 60.614 55.000 0.00 0.00 41.38 4.37 R
4798 6219 0.710588 TCCTTAGGACCAGCTGAGGA 59.289 55.000 17.39 15.36 0.00 3.71 R
5886 9657 0.029035 CGATGAAGACTACGTCCCCG 59.971 60.000 0.00 0.00 40.83 5.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
145 146 1.381327 ATCACCCGGTCGATCCAGT 60.381 57.895 0.00 0.00 35.57 4.00
156 157 4.778143 ATCCAGTGCGGGGCGTTC 62.778 66.667 0.00 0.00 34.36 3.95
198 199 3.246112 TCCCTTGTGGACACCCCG 61.246 66.667 0.00 0.00 38.61 5.73
221 222 0.034616 CGCTCCATCCTTCTCATCCC 59.965 60.000 0.00 0.00 0.00 3.85
228 229 3.446873 CCATCCTTCTCATCCCTATCTCG 59.553 52.174 0.00 0.00 0.00 4.04
257 259 4.389992 CAGAGACAACAACGACATGCTATT 59.610 41.667 0.00 0.00 0.00 1.73
263 265 6.142817 ACAACAACGACATGCTATTTCTTTC 58.857 36.000 0.00 0.00 0.00 2.62
313 315 0.250467 CCCCATGACCTCCTATTGCG 60.250 60.000 0.00 0.00 0.00 4.85
332 334 2.274834 GATTCGTGGCGTCGTTTCCG 62.275 60.000 0.00 0.00 0.00 4.30
338 340 2.382746 GGCGTCGTTTCCGGTTACC 61.383 63.158 0.00 0.00 33.95 2.85
339 341 1.373371 GCGTCGTTTCCGGTTACCT 60.373 57.895 0.00 0.00 33.95 3.08
343 345 1.446618 CGTTTCCGGTTACCTCCCG 60.447 63.158 0.00 0.00 45.07 5.14
362 372 0.179097 GCCCTTCTCTTCTAGCACGG 60.179 60.000 0.00 0.00 0.00 4.94
411 421 2.793933 CGACCGAAACACGAGATACAT 58.206 47.619 0.00 0.00 45.77 2.29
443 453 1.671979 CCATCTGACGCCAATGTCAT 58.328 50.000 0.00 0.00 46.98 3.06
482 492 2.669569 CGCCACCACCTCAACCTG 60.670 66.667 0.00 0.00 0.00 4.00
490 500 3.060615 CCTCAACCTGCTGCAGCC 61.061 66.667 34.64 17.82 41.18 4.85
567 583 1.166531 ACAGAGCCTCCGTTGCAAAC 61.167 55.000 0.00 0.00 45.31 2.93
609 625 2.857748 GTTTCAAAAGGGTTCTGCAACG 59.142 45.455 0.00 0.00 32.68 4.10
610 626 1.757682 TCAAAAGGGTTCTGCAACGT 58.242 45.000 0.00 0.00 32.68 3.99
625 641 2.341257 CAACGTGACCTTCTGATGGAG 58.659 52.381 15.76 6.97 0.00 3.86
645 661 4.036380 GGAGAAGAACACGGTTTGAATTGT 59.964 41.667 0.00 0.00 0.00 2.71
777 820 2.701163 GAATGAGCCGGCCCTACGAG 62.701 65.000 26.15 0.00 35.47 4.18
828 876 2.657237 GGTCCACTCCACTCCACG 59.343 66.667 0.00 0.00 0.00 4.94
1266 1330 3.023735 ACCATCCCCTTCCAGCCC 61.024 66.667 0.00 0.00 0.00 5.19
1428 1499 2.029290 TGTTTCGCTCCTCTTCTGTACC 60.029 50.000 0.00 0.00 0.00 3.34
1434 1505 3.243234 CGCTCCTCTTCTGTACCATACTG 60.243 52.174 0.00 0.00 0.00 2.74
1435 1506 3.702045 GCTCCTCTTCTGTACCATACTGT 59.298 47.826 0.00 0.00 0.00 3.55
1441 1512 4.159693 TCTTCTGTACCATACTGTGCGATT 59.840 41.667 0.00 0.00 0.00 3.34
1468 1539 3.496160 GCTAGTGTTTGGGTTCCAAGAGA 60.496 47.826 0.00 0.00 44.84 3.10
1469 1540 3.214696 AGTGTTTGGGTTCCAAGAGAG 57.785 47.619 0.00 0.00 44.84 3.20
1482 1553 3.519510 TCCAAGAGAGGGTGGATTAACAG 59.480 47.826 0.00 0.00 39.04 3.16
1539 1615 1.270550 GGGTAGAACGGAGAAACGACA 59.729 52.381 0.00 0.00 37.61 4.35
1567 1647 3.131709 CAGTATGGGCAGGGTTAGATG 57.868 52.381 0.00 0.00 0.00 2.90
1597 1677 7.324178 AGGAACACATGACTTAAGTGAGATAC 58.676 38.462 14.14 0.00 37.05 2.24
1616 1696 1.004044 ACCCCTGCTCTGTTTCAGATG 59.996 52.381 0.00 0.00 39.92 2.90
1671 1752 7.333528 TGCTATTGGATCAAATTAAGTGTCC 57.666 36.000 0.00 0.00 0.00 4.02
1752 1833 3.889538 TGGTAGGGATCACTAGATGTTCG 59.110 47.826 4.49 0.00 33.72 3.95
1754 1835 4.216687 GGTAGGGATCACTAGATGTTCGAG 59.783 50.000 4.49 0.00 33.72 4.04
1757 1838 4.522405 AGGGATCACTAGATGTTCGAGATG 59.478 45.833 0.00 0.00 33.72 2.90
1783 1866 3.249320 CGGTGACTAGCATTAGTAGCGTA 59.751 47.826 0.00 0.00 40.21 4.42
1897 1982 3.389656 TCCATCCGTATTTCCAGTGCATA 59.610 43.478 0.00 0.00 0.00 3.14
2197 2282 2.734591 GCCGAGTGTGTGTGGAGA 59.265 61.111 0.00 0.00 0.00 3.71
2457 2546 6.846350 ACTTTTGAAGATTTCTGCTAATCGG 58.154 36.000 0.00 0.00 39.09 4.18
2554 2643 8.547481 TCCTCTTTCCTAAAGAAAATTGGTTT 57.453 30.769 3.88 0.00 46.13 3.27
2568 2657 8.702163 GAAAATTGGTTTCTTGTTTCTCTTGA 57.298 30.769 0.00 0.00 42.15 3.02
2570 2659 8.479313 AAATTGGTTTCTTGTTTCTCTTGAAC 57.521 30.769 0.00 0.00 31.02 3.18
2713 2807 2.959030 GGAAGGGTTTATGGAGATTGCC 59.041 50.000 0.00 0.00 0.00 4.52
2832 2926 2.094130 GCCCCAGTCTTATAGGCGATAC 60.094 54.545 0.00 0.00 33.18 2.24
3039 3135 2.291741 GGACACCTTTCTGACAGCTTTG 59.708 50.000 0.00 0.00 0.00 2.77
3043 3139 2.099756 ACCTTTCTGACAGCTTTGTTGC 59.900 45.455 0.00 0.00 0.00 4.17
3134 3230 6.223138 TCTGCATTAAGTTACAACTTCACG 57.777 37.500 10.51 2.63 45.65 4.35
3290 3391 8.207545 TGAACTATTAAAATGTGCCTTTTTGGT 58.792 29.630 8.21 0.00 38.35 3.67
3322 3423 2.629137 TGCTGCTTTCAATGGACAACAT 59.371 40.909 0.00 0.00 43.07 2.71
3337 3438 0.392998 AACATGGGAGGCTTAGTGCG 60.393 55.000 0.00 0.00 44.05 5.34
3351 3452 4.264849 GCTTAGTGCGTACTTAACTACAGC 59.735 45.833 12.53 5.01 38.36 4.40
3498 3600 2.353889 CTCTGGAATGATGTTCTTGCCG 59.646 50.000 0.00 0.00 0.00 5.69
3599 3701 7.107639 ACTGCCTTAAAAGTAAGAAGCAAAA 57.892 32.000 0.00 0.00 39.36 2.44
3635 3737 5.927954 AACACTTGCAGCCATTTTTATTG 57.072 34.783 0.00 0.00 0.00 1.90
3743 3845 3.055819 TGTGCTAGAGAAGTTGGATGGTC 60.056 47.826 0.00 0.00 0.00 4.02
3822 3925 6.014584 AGCATGGGGAAAGGTAAAACTTTAAG 60.015 38.462 0.00 0.00 40.55 1.85
3827 3930 7.039574 TGGGGAAAGGTAAAACTTTAAGCATAC 60.040 37.037 0.00 0.00 40.55 2.39
3828 3931 7.025365 GGGAAAGGTAAAACTTTAAGCATACG 58.975 38.462 0.00 0.00 40.55 3.06
3939 4042 1.271054 GCTGCCTCTCCTGAGAAACAA 60.271 52.381 0.00 0.00 42.73 2.83
4057 5395 5.940192 ATCTCTACTCGTCATCTAAGCTG 57.060 43.478 0.00 0.00 0.00 4.24
4194 5533 2.159128 TGCAATGGGATTATTTGTGCCG 60.159 45.455 0.00 0.00 0.00 5.69
4309 5672 5.697067 ACCACACATAGGTTTTCCAAAGTA 58.303 37.500 0.00 0.00 43.73 2.24
4408 5774 6.885376 TGATTTTCCTTGGCATTTATTTGCAT 59.115 30.769 0.00 0.00 44.59 3.96
4440 5806 4.500499 AGGAAATCTTCATCCACTCCAG 57.500 45.455 0.00 0.00 38.23 3.86
4451 5817 1.416401 TCCACTCCAGTCTGTTGGAAC 59.584 52.381 11.05 0.00 46.20 3.62
4474 5875 6.454795 ACGTTTTTCCTATGCACAATCAAAT 58.545 32.000 0.00 0.00 0.00 2.32
4493 5894 7.770801 TCAAATATCTTTCGACCATGTAGTG 57.229 36.000 0.00 0.00 0.00 2.74
4513 5914 6.101650 AGTGTTCAAGATGACATGACACTA 57.898 37.500 11.74 0.00 36.02 2.74
4558 5967 8.033178 TCATGTGAATCAAGGAGGTTATATGA 57.967 34.615 0.00 0.00 0.00 2.15
4647 6058 0.163788 CGGTAGTTTGCGCTTCACAG 59.836 55.000 9.73 0.00 0.00 3.66
4706 6120 0.454957 CTTTCAGCGGAATTGTGGCG 60.455 55.000 0.00 0.00 31.93 5.69
4798 6219 8.777865 TCGTCATGATTTATCTTTCTTTGTCT 57.222 30.769 0.00 0.00 0.00 3.41
4802 6223 9.388506 TCATGATTTATCTTTCTTTGTCTCCTC 57.611 33.333 0.00 0.00 0.00 3.71
4815 6236 1.754226 GTCTCCTCAGCTGGTCCTAAG 59.246 57.143 15.13 2.03 0.00 2.18
4823 6244 5.544176 CCTCAGCTGGTCCTAAGGATTATTA 59.456 44.000 15.13 0.00 32.73 0.98
4825 6246 7.256835 CCTCAGCTGGTCCTAAGGATTATTATT 60.257 40.741 15.13 0.00 32.73 1.40
4826 6247 7.680730 TCAGCTGGTCCTAAGGATTATTATTC 58.319 38.462 15.13 0.00 32.73 1.75
4828 6249 5.875359 GCTGGTCCTAAGGATTATTATTCGG 59.125 44.000 0.00 0.00 32.73 4.30
4829 6250 6.520231 GCTGGTCCTAAGGATTATTATTCGGT 60.520 42.308 0.00 0.00 32.73 4.69
4830 6251 7.001099 TGGTCCTAAGGATTATTATTCGGTC 57.999 40.000 0.00 0.00 32.73 4.79
4831 6252 6.555738 TGGTCCTAAGGATTATTATTCGGTCA 59.444 38.462 0.00 0.00 32.73 4.02
5021 8368 3.177884 AGGTGGCCTTGGCTGTGA 61.178 61.111 11.71 0.00 0.00 3.58
5022 8369 2.985847 GGTGGCCTTGGCTGTGAC 60.986 66.667 11.71 3.83 0.00 3.67
5035 8384 4.059459 GTGACGTGCGTTGCCTCG 62.059 66.667 0.00 2.89 0.00 4.63
5057 8406 7.389053 CCTCGGCTCTATTCTTTTGCTAAATAT 59.611 37.037 0.00 0.00 0.00 1.28
5151 8525 0.388649 CTTAACGTCCAGCGCTGTCT 60.389 55.000 33.75 16.18 46.11 3.41
5157 8531 0.741326 GTCCAGCGCTGTCTCTGATA 59.259 55.000 33.75 7.63 32.26 2.15
5167 8557 1.764723 TGTCTCTGATAGCCATGTGGG 59.235 52.381 0.54 0.00 40.85 4.61
5169 8559 2.171448 GTCTCTGATAGCCATGTGGGTT 59.829 50.000 9.26 0.00 44.81 4.11
5170 8560 2.171237 TCTCTGATAGCCATGTGGGTTG 59.829 50.000 9.26 0.00 44.81 3.77
5171 8561 1.212688 TCTGATAGCCATGTGGGTTGG 59.787 52.381 9.26 0.00 44.81 3.77
5172 8562 0.258484 TGATAGCCATGTGGGTTGGG 59.742 55.000 9.26 0.00 44.81 4.12
5173 8563 0.258774 GATAGCCATGTGGGTTGGGT 59.741 55.000 9.26 0.00 44.81 4.51
5174 8564 0.709992 ATAGCCATGTGGGTTGGGTT 59.290 50.000 9.26 0.00 44.81 4.11
5175 8565 0.251564 TAGCCATGTGGGTTGGGTTG 60.252 55.000 9.26 0.00 44.81 3.77
5176 8566 2.582493 GCCATGTGGGTTGGGTTGG 61.582 63.158 0.54 0.00 39.65 3.77
5177 8567 1.912763 CCATGTGGGTTGGGTTGGG 60.913 63.158 0.00 0.00 0.00 4.12
5183 8573 4.589675 GGTTGGGTTGGGCCGTCA 62.590 66.667 0.00 0.00 38.44 4.35
5188 8578 0.333312 TGGGTTGGGCCGTCATAATT 59.667 50.000 0.00 0.00 38.44 1.40
5217 8607 5.244626 GCCAGGATGTAAATAGCATTTCCAT 59.755 40.000 0.00 0.00 0.00 3.41
5218 8608 6.684686 CCAGGATGTAAATAGCATTTCCATG 58.315 40.000 5.04 0.00 0.00 3.66
5219 8609 6.266103 CCAGGATGTAAATAGCATTTCCATGT 59.734 38.462 5.04 0.00 32.28 3.21
5220 8610 7.201938 CCAGGATGTAAATAGCATTTCCATGTT 60.202 37.037 5.04 0.00 32.28 2.71
5222 8612 7.560991 AGGATGTAAATAGCATTTCCATGTTGA 59.439 33.333 5.04 0.00 32.28 3.18
5227 8617 9.754382 GTAAATAGCATTTCCATGTTGATGATT 57.246 29.630 0.00 0.00 32.28 2.57
5228 8618 8.657074 AAATAGCATTTCCATGTTGATGATTG 57.343 30.769 0.00 0.00 32.28 2.67
5229 8619 5.018539 AGCATTTCCATGTTGATGATTGG 57.981 39.130 0.00 0.00 32.28 3.16
5230 8620 4.712829 AGCATTTCCATGTTGATGATTGGA 59.287 37.500 0.00 0.00 36.49 3.53
5231 8621 5.188163 AGCATTTCCATGTTGATGATTGGAA 59.812 36.000 0.00 0.00 44.38 3.53
5232 8622 6.053005 GCATTTCCATGTTGATGATTGGAAT 58.947 36.000 4.24 0.00 45.14 3.01
5233 8623 6.540914 GCATTTCCATGTTGATGATTGGAATT 59.459 34.615 4.24 0.00 45.14 2.17
5234 8624 7.254658 GCATTTCCATGTTGATGATTGGAATTC 60.255 37.037 4.24 0.00 45.14 2.17
5235 8625 5.857471 TCCATGTTGATGATTGGAATTCC 57.143 39.130 18.17 18.17 35.38 3.01
5236 8626 5.270794 TCCATGTTGATGATTGGAATTCCA 58.729 37.500 23.63 23.63 45.94 3.53
5256 8646 6.012658 TCCAATGCATATTTATTCCGCTTC 57.987 37.500 0.00 0.00 0.00 3.86
5261 8651 7.928307 ATGCATATTTATTCCGCTTCATACT 57.072 32.000 0.00 0.00 0.00 2.12
5263 8653 7.806690 TGCATATTTATTCCGCTTCATACTTC 58.193 34.615 0.00 0.00 0.00 3.01
5264 8654 7.661437 TGCATATTTATTCCGCTTCATACTTCT 59.339 33.333 0.00 0.00 0.00 2.85
5265 8655 9.151471 GCATATTTATTCCGCTTCATACTTCTA 57.849 33.333 0.00 0.00 0.00 2.10
5269 8659 8.589335 TTTATTCCGCTTCATACTTCTATCAC 57.411 34.615 0.00 0.00 0.00 3.06
5270 8660 4.585955 TCCGCTTCATACTTCTATCACC 57.414 45.455 0.00 0.00 0.00 4.02
5271 8661 3.321111 TCCGCTTCATACTTCTATCACCC 59.679 47.826 0.00 0.00 0.00 4.61
5272 8662 3.309388 CGCTTCATACTTCTATCACCCG 58.691 50.000 0.00 0.00 0.00 5.28
5275 8665 4.441634 GCTTCATACTTCTATCACCCGTGT 60.442 45.833 0.00 0.00 0.00 4.49
5276 8666 5.221185 GCTTCATACTTCTATCACCCGTGTA 60.221 44.000 0.00 0.00 0.00 2.90
5277 8667 6.387041 TTCATACTTCTATCACCCGTGTAG 57.613 41.667 0.00 0.00 0.00 2.74
5278 8668 5.443283 TCATACTTCTATCACCCGTGTAGT 58.557 41.667 0.00 0.00 0.00 2.73
5279 8669 5.298527 TCATACTTCTATCACCCGTGTAGTG 59.701 44.000 0.00 0.00 36.54 2.74
5280 8670 2.165845 ACTTCTATCACCCGTGTAGTGC 59.834 50.000 0.00 0.00 35.14 4.40
5282 8672 3.286329 TCTATCACCCGTGTAGTGCTA 57.714 47.619 0.00 0.00 35.14 3.49
5283 8673 2.947652 TCTATCACCCGTGTAGTGCTAC 59.052 50.000 2.60 2.60 35.14 3.58
5328 8720 6.377327 GCTTGCAGCAAAATTACCTATAGA 57.623 37.500 9.65 0.00 41.89 1.98
5346 8738 0.323451 GAGGTAAAGTGGGCCTTGGG 60.323 60.000 4.53 0.00 32.32 4.12
5390 8791 1.405463 GCTTAGGCCTCCGATTTTTGG 59.595 52.381 9.68 0.00 0.00 3.28
5402 8937 7.701809 CTCCGATTTTTGGAGTAGAAGTATC 57.298 40.000 3.02 0.00 46.49 2.24
5403 8938 7.419711 TCCGATTTTTGGAGTAGAAGTATCT 57.580 36.000 0.00 0.00 39.82 1.98
5404 8939 7.490000 TCCGATTTTTGGAGTAGAAGTATCTC 58.510 38.462 0.00 0.00 37.10 2.75
5414 8985 6.096001 GGAGTAGAAGTATCTCCCGTTTACAA 59.904 42.308 0.00 0.00 41.09 2.41
5452 9023 1.331447 GCAGCAAAAGCCCAAACAAAG 59.669 47.619 0.00 0.00 0.00 2.77
5454 9025 3.269178 CAGCAAAAGCCCAAACAAAGAA 58.731 40.909 0.00 0.00 0.00 2.52
5456 9027 3.689161 AGCAAAAGCCCAAACAAAGAAAC 59.311 39.130 0.00 0.00 0.00 2.78
5457 9028 3.438434 GCAAAAGCCCAAACAAAGAAACA 59.562 39.130 0.00 0.00 0.00 2.83
5458 9029 4.083057 GCAAAAGCCCAAACAAAGAAACAA 60.083 37.500 0.00 0.00 0.00 2.83
5459 9030 5.563671 GCAAAAGCCCAAACAAAGAAACAAA 60.564 36.000 0.00 0.00 0.00 2.83
5460 9031 5.621197 AAAGCCCAAACAAAGAAACAAAC 57.379 34.783 0.00 0.00 0.00 2.93
5461 9032 3.258228 AGCCCAAACAAAGAAACAAACG 58.742 40.909 0.00 0.00 0.00 3.60
5463 9034 3.181525 GCCCAAACAAAGAAACAAACGTG 60.182 43.478 0.00 0.00 0.00 4.49
5464 9035 3.181525 CCCAAACAAAGAAACAAACGTGC 60.182 43.478 0.00 0.00 0.00 5.34
5468 9039 3.691498 ACAAAGAAACAAACGTGCTAGC 58.309 40.909 8.10 8.10 0.00 3.42
5469 9040 3.377172 ACAAAGAAACAAACGTGCTAGCT 59.623 39.130 17.23 0.00 0.00 3.32
5470 9041 4.142469 ACAAAGAAACAAACGTGCTAGCTT 60.142 37.500 17.23 0.00 0.00 3.74
5472 9043 2.044135 GAAACAAACGTGCTAGCTTGC 58.956 47.619 17.23 13.56 0.00 4.01
5475 9046 0.867746 CAAACGTGCTAGCTTGCAGA 59.132 50.000 23.27 0.00 44.20 4.26
5476 9047 1.466167 CAAACGTGCTAGCTTGCAGAT 59.534 47.619 23.27 11.40 44.20 2.90
5477 9048 1.081892 AACGTGCTAGCTTGCAGATG 58.918 50.000 23.27 17.24 44.20 2.90
5478 9049 0.742281 ACGTGCTAGCTTGCAGATGG 60.742 55.000 23.27 14.42 44.20 3.51
5479 9050 1.434622 CGTGCTAGCTTGCAGATGGG 61.435 60.000 23.27 6.85 44.20 4.00
5480 9051 0.393537 GTGCTAGCTTGCAGATGGGT 60.394 55.000 23.27 0.00 44.20 4.51
5481 9052 0.393402 TGCTAGCTTGCAGATGGGTG 60.393 55.000 19.10 0.00 38.12 4.61
5482 9053 0.393537 GCTAGCTTGCAGATGGGTGT 60.394 55.000 15.53 0.00 0.00 4.16
5483 9054 1.661341 CTAGCTTGCAGATGGGTGTC 58.339 55.000 0.00 0.00 0.00 3.67
5484 9055 1.209019 CTAGCTTGCAGATGGGTGTCT 59.791 52.381 0.00 0.00 0.00 3.41
5485 9056 0.035630 AGCTTGCAGATGGGTGTCTC 60.036 55.000 0.00 0.00 0.00 3.36
5486 9057 0.321919 GCTTGCAGATGGGTGTCTCA 60.322 55.000 0.00 0.00 0.00 3.27
5487 9058 1.883638 GCTTGCAGATGGGTGTCTCAA 60.884 52.381 0.00 0.00 0.00 3.02
5488 9059 2.507484 CTTGCAGATGGGTGTCTCAAA 58.493 47.619 0.00 0.00 0.00 2.69
5489 9060 1.896220 TGCAGATGGGTGTCTCAAAC 58.104 50.000 0.00 0.00 0.00 2.93
5490 9061 1.142667 TGCAGATGGGTGTCTCAAACA 59.857 47.619 0.00 0.00 34.78 2.83
5491 9062 2.229792 GCAGATGGGTGTCTCAAACAA 58.770 47.619 0.00 0.00 40.31 2.83
5492 9063 2.622942 GCAGATGGGTGTCTCAAACAAA 59.377 45.455 0.00 0.00 40.31 2.83
5493 9064 3.068024 GCAGATGGGTGTCTCAAACAAAA 59.932 43.478 0.00 0.00 40.31 2.44
5494 9065 4.794003 GCAGATGGGTGTCTCAAACAAAAG 60.794 45.833 0.00 0.00 40.31 2.27
5495 9066 4.580167 CAGATGGGTGTCTCAAACAAAAGA 59.420 41.667 0.00 0.00 40.31 2.52
5496 9067 5.067674 CAGATGGGTGTCTCAAACAAAAGAA 59.932 40.000 0.00 0.00 40.31 2.52
5497 9068 5.656416 AGATGGGTGTCTCAAACAAAAGAAA 59.344 36.000 0.00 0.00 40.31 2.52
5498 9069 5.323371 TGGGTGTCTCAAACAAAAGAAAG 57.677 39.130 0.00 0.00 40.31 2.62
5499 9070 5.013547 TGGGTGTCTCAAACAAAAGAAAGA 58.986 37.500 0.00 0.00 40.31 2.52
5500 9071 5.478679 TGGGTGTCTCAAACAAAAGAAAGAA 59.521 36.000 0.00 0.00 40.31 2.52
5501 9072 6.015010 TGGGTGTCTCAAACAAAAGAAAGAAA 60.015 34.615 0.00 0.00 40.31 2.52
5502 9073 6.871492 GGGTGTCTCAAACAAAAGAAAGAAAA 59.129 34.615 0.00 0.00 40.31 2.29
5503 9074 7.386573 GGGTGTCTCAAACAAAAGAAAGAAAAA 59.613 33.333 0.00 0.00 40.31 1.94
5504 9075 8.221100 GGTGTCTCAAACAAAAGAAAGAAAAAC 58.779 33.333 0.00 0.00 40.31 2.43
5505 9076 8.978539 GTGTCTCAAACAAAAGAAAGAAAAACT 58.021 29.630 0.00 0.00 40.31 2.66
5506 9077 9.541143 TGTCTCAAACAAAAGAAAGAAAAACTT 57.459 25.926 0.00 0.00 36.14 2.66
5507 9078 9.797473 GTCTCAAACAAAAGAAAGAAAAACTTG 57.203 29.630 0.00 0.00 38.98 3.16
5508 9079 9.757227 TCTCAAACAAAAGAAAGAAAAACTTGA 57.243 25.926 0.00 0.00 38.98 3.02
5510 9081 8.495148 TCAAACAAAAGAAAGAAAAACTTGAGC 58.505 29.630 0.00 0.00 38.98 4.26
5511 9082 8.498358 CAAACAAAAGAAAGAAAAACTTGAGCT 58.502 29.630 0.00 0.00 38.98 4.09
5512 9083 9.705290 AAACAAAAGAAAGAAAAACTTGAGCTA 57.295 25.926 0.00 0.00 38.98 3.32
5513 9084 9.875691 AACAAAAGAAAGAAAAACTTGAGCTAT 57.124 25.926 0.00 0.00 38.98 2.97
5514 9085 9.305925 ACAAAAGAAAGAAAAACTTGAGCTATG 57.694 29.630 0.00 0.00 38.98 2.23
5515 9086 7.936950 AAAGAAAGAAAAACTTGAGCTATGC 57.063 32.000 0.00 0.00 38.98 3.14
5516 9087 6.890979 AGAAAGAAAAACTTGAGCTATGCT 57.109 33.333 0.00 0.00 38.78 3.79
5517 9088 7.282332 AGAAAGAAAAACTTGAGCTATGCTT 57.718 32.000 0.00 0.00 37.07 3.91
5518 9089 7.366513 AGAAAGAAAAACTTGAGCTATGCTTC 58.633 34.615 0.00 0.00 37.07 3.86
5519 9090 6.639632 AAGAAAAACTTGAGCTATGCTTCA 57.360 33.333 0.00 0.00 39.88 3.02
5520 9091 6.251655 AGAAAAACTTGAGCTATGCTTCAG 57.748 37.500 0.00 0.00 39.88 3.02
5521 9092 6.000219 AGAAAAACTTGAGCTATGCTTCAGA 59.000 36.000 0.00 0.00 39.88 3.27
5522 9093 6.658391 AGAAAAACTTGAGCTATGCTTCAGAT 59.342 34.615 0.00 0.00 39.88 2.90
5523 9094 7.826252 AGAAAAACTTGAGCTATGCTTCAGATA 59.174 33.333 0.00 0.00 39.88 1.98
5524 9095 6.917217 AAACTTGAGCTATGCTTCAGATAC 57.083 37.500 0.00 0.00 39.88 2.24
5525 9096 5.867903 ACTTGAGCTATGCTTCAGATACT 57.132 39.130 0.00 0.00 39.88 2.12
5526 9097 5.599732 ACTTGAGCTATGCTTCAGATACTG 58.400 41.667 0.00 0.00 39.88 2.74
5527 9098 4.597404 TGAGCTATGCTTCAGATACTGG 57.403 45.455 0.00 0.00 39.88 4.00
5528 9099 3.963374 TGAGCTATGCTTCAGATACTGGT 59.037 43.478 0.00 0.00 39.88 4.00
5531 9102 4.039004 AGCTATGCTTCAGATACTGGTCTG 59.961 45.833 6.12 6.12 45.51 3.51
5543 9114 5.667626 AGATACTGGTCTGGTGGAATATTGT 59.332 40.000 0.00 0.00 0.00 2.71
5548 9119 6.615726 ACTGGTCTGGTGGAATATTGTACTAT 59.384 38.462 0.00 0.00 0.00 2.12
5552 9123 4.890088 TGGTGGAATATTGTACTATCCGC 58.110 43.478 0.00 0.00 0.00 5.54
5731 9502 3.047796 GACGAGCTTCTAAACAACACGA 58.952 45.455 0.00 0.00 0.00 4.35
5763 9534 1.966762 CCGCTGCCATGAGGTTTTT 59.033 52.632 0.00 0.00 37.19 1.94
5806 9577 2.415357 GCTCCTCTGCTACTCGATATGC 60.415 54.545 0.00 0.00 0.00 3.14
5807 9578 3.081061 CTCCTCTGCTACTCGATATGCT 58.919 50.000 0.00 0.00 0.00 3.79
5808 9579 2.816672 TCCTCTGCTACTCGATATGCTG 59.183 50.000 0.00 0.00 0.00 4.41
5809 9580 2.816672 CCTCTGCTACTCGATATGCTGA 59.183 50.000 10.80 10.80 33.60 4.26
5810 9581 3.365868 CCTCTGCTACTCGATATGCTGAC 60.366 52.174 8.39 0.00 31.87 3.51
5811 9582 3.481453 TCTGCTACTCGATATGCTGACT 58.519 45.455 8.39 0.00 0.00 3.41
5812 9583 3.500299 TCTGCTACTCGATATGCTGACTC 59.500 47.826 8.39 0.00 0.00 3.36
5813 9584 2.224314 TGCTACTCGATATGCTGACTCG 59.776 50.000 0.00 0.00 0.00 4.18
5814 9585 2.480802 GCTACTCGATATGCTGACTCGA 59.519 50.000 0.00 0.00 38.95 4.04
5815 9586 3.126171 GCTACTCGATATGCTGACTCGAT 59.874 47.826 0.00 0.00 40.29 3.59
5816 9587 3.550950 ACTCGATATGCTGACTCGATG 57.449 47.619 0.00 0.00 40.29 3.84
5817 9588 3.142174 ACTCGATATGCTGACTCGATGA 58.858 45.455 0.00 0.00 40.29 2.92
5818 9589 3.188254 ACTCGATATGCTGACTCGATGAG 59.812 47.826 0.00 0.00 40.29 2.90
5819 9590 3.142174 TCGATATGCTGACTCGATGAGT 58.858 45.455 0.00 0.00 46.42 3.41
5829 9600 2.379005 ACTCGATGAGTCAGCATACCA 58.621 47.619 9.40 0.00 38.71 3.25
5830 9601 2.760650 ACTCGATGAGTCAGCATACCAA 59.239 45.455 9.40 0.00 38.71 3.67
5831 9602 3.195610 ACTCGATGAGTCAGCATACCAAA 59.804 43.478 9.40 0.00 38.71 3.28
5832 9603 3.521560 TCGATGAGTCAGCATACCAAAC 58.478 45.455 9.40 0.00 0.00 2.93
5833 9604 2.609459 CGATGAGTCAGCATACCAAACC 59.391 50.000 9.40 0.00 0.00 3.27
5834 9605 2.093306 TGAGTCAGCATACCAAACCG 57.907 50.000 0.00 0.00 0.00 4.44
5835 9606 0.727398 GAGTCAGCATACCAAACCGC 59.273 55.000 0.00 0.00 0.00 5.68
5836 9607 0.036164 AGTCAGCATACCAAACCGCA 59.964 50.000 0.00 0.00 0.00 5.69
5837 9608 1.094785 GTCAGCATACCAAACCGCAT 58.905 50.000 0.00 0.00 0.00 4.73
5838 9609 1.064060 GTCAGCATACCAAACCGCATC 59.936 52.381 0.00 0.00 0.00 3.91
5839 9610 1.065491 TCAGCATACCAAACCGCATCT 60.065 47.619 0.00 0.00 0.00 2.90
5840 9611 1.331756 CAGCATACCAAACCGCATCTC 59.668 52.381 0.00 0.00 0.00 2.75
5841 9612 0.663153 GCATACCAAACCGCATCTCC 59.337 55.000 0.00 0.00 0.00 3.71
5842 9613 2.016604 GCATACCAAACCGCATCTCCA 61.017 52.381 0.00 0.00 0.00 3.86
5843 9614 1.670811 CATACCAAACCGCATCTCCAC 59.329 52.381 0.00 0.00 0.00 4.02
5844 9615 0.035820 TACCAAACCGCATCTCCACC 60.036 55.000 0.00 0.00 0.00 4.61
5845 9616 1.002134 CCAAACCGCATCTCCACCT 60.002 57.895 0.00 0.00 0.00 4.00
5846 9617 1.026718 CCAAACCGCATCTCCACCTC 61.027 60.000 0.00 0.00 0.00 3.85
5847 9618 1.026718 CAAACCGCATCTCCACCTCC 61.027 60.000 0.00 0.00 0.00 4.30
5848 9619 1.201429 AAACCGCATCTCCACCTCCT 61.201 55.000 0.00 0.00 0.00 3.69
5849 9620 1.617947 AACCGCATCTCCACCTCCTC 61.618 60.000 0.00 0.00 0.00 3.71
5850 9621 2.801631 CCGCATCTCCACCTCCTCC 61.802 68.421 0.00 0.00 0.00 4.30
5851 9622 1.760086 CGCATCTCCACCTCCTCCT 60.760 63.158 0.00 0.00 0.00 3.69
5852 9623 1.333636 CGCATCTCCACCTCCTCCTT 61.334 60.000 0.00 0.00 0.00 3.36
5853 9624 0.179936 GCATCTCCACCTCCTCCTTG 59.820 60.000 0.00 0.00 0.00 3.61
5854 9625 1.577736 CATCTCCACCTCCTCCTTGT 58.422 55.000 0.00 0.00 0.00 3.16
5855 9626 1.912043 CATCTCCACCTCCTCCTTGTT 59.088 52.381 0.00 0.00 0.00 2.83
5856 9627 1.645710 TCTCCACCTCCTCCTTGTTC 58.354 55.000 0.00 0.00 0.00 3.18
5857 9628 1.132849 TCTCCACCTCCTCCTTGTTCA 60.133 52.381 0.00 0.00 0.00 3.18
5858 9629 1.002544 CTCCACCTCCTCCTTGTTCAC 59.997 57.143 0.00 0.00 0.00 3.18
5859 9630 0.320771 CCACCTCCTCCTTGTTCACG 60.321 60.000 0.00 0.00 0.00 4.35
5860 9631 0.320771 CACCTCCTCCTTGTTCACGG 60.321 60.000 0.00 0.00 0.00 4.94
5861 9632 0.471211 ACCTCCTCCTTGTTCACGGA 60.471 55.000 0.00 0.00 0.00 4.69
5862 9633 0.905357 CCTCCTCCTTGTTCACGGAT 59.095 55.000 0.00 0.00 0.00 4.18
5863 9634 1.406069 CCTCCTCCTTGTTCACGGATG 60.406 57.143 0.00 0.00 0.00 3.51
5864 9635 0.613260 TCCTCCTTGTTCACGGATGG 59.387 55.000 0.00 3.84 0.00 3.51
5865 9636 1.026718 CCTCCTTGTTCACGGATGGC 61.027 60.000 0.00 0.00 0.00 4.40
5866 9637 0.036010 CTCCTTGTTCACGGATGGCT 60.036 55.000 0.00 0.00 0.00 4.75
5867 9638 0.321564 TCCTTGTTCACGGATGGCTG 60.322 55.000 0.00 0.00 0.00 4.85
5868 9639 1.503542 CTTGTTCACGGATGGCTGC 59.496 57.895 0.00 0.00 0.00 5.25
5869 9640 1.228094 TTGTTCACGGATGGCTGCA 60.228 52.632 0.50 0.00 0.00 4.41
5870 9641 1.236616 TTGTTCACGGATGGCTGCAG 61.237 55.000 10.11 10.11 0.00 4.41
5871 9642 2.747460 TTCACGGATGGCTGCAGC 60.747 61.111 30.88 30.88 41.14 5.25
5872 9643 3.549900 TTCACGGATGGCTGCAGCA 62.550 57.895 37.63 24.48 44.36 4.41
5873 9644 3.057548 CACGGATGGCTGCAGCAA 61.058 61.111 37.63 30.16 44.36 3.91
5874 9645 3.058160 ACGGATGGCTGCAGCAAC 61.058 61.111 37.63 26.12 44.36 4.17
5875 9646 3.057548 CGGATGGCTGCAGCAACA 61.058 61.111 37.63 27.67 44.36 3.33
5876 9647 2.412323 CGGATGGCTGCAGCAACAT 61.412 57.895 37.63 30.73 44.36 2.71
5877 9648 1.141019 GGATGGCTGCAGCAACATG 59.859 57.895 37.63 1.10 44.36 3.21
5878 9649 1.317431 GGATGGCTGCAGCAACATGA 61.317 55.000 37.63 15.44 44.36 3.07
5879 9650 0.179145 GATGGCTGCAGCAACATGAC 60.179 55.000 37.63 20.06 44.36 3.06
5880 9651 0.896479 ATGGCTGCAGCAACATGACA 60.896 50.000 37.63 24.81 44.36 3.58
5881 9652 1.108132 TGGCTGCAGCAACATGACAA 61.108 50.000 37.63 10.14 44.36 3.18
5882 9653 0.388134 GGCTGCAGCAACATGACAAG 60.388 55.000 37.63 0.00 44.36 3.16
5883 9654 1.007336 GCTGCAGCAACATGACAAGC 61.007 55.000 33.36 1.32 41.59 4.01
5884 9655 0.728129 CTGCAGCAACATGACAAGCG 60.728 55.000 0.00 0.00 0.00 4.68
5885 9656 1.283793 GCAGCAACATGACAAGCGT 59.716 52.632 0.00 0.00 0.00 5.07
5886 9657 0.727122 GCAGCAACATGACAAGCGTC 60.727 55.000 0.00 0.00 42.93 5.19
5887 9658 0.451628 CAGCAACATGACAAGCGTCG 60.452 55.000 0.00 0.00 45.80 5.12
5888 9659 1.154413 GCAACATGACAAGCGTCGG 60.154 57.895 0.00 0.00 45.80 4.79
5889 9660 1.497278 CAACATGACAAGCGTCGGG 59.503 57.895 0.00 0.00 45.80 5.14
5890 9661 1.671054 AACATGACAAGCGTCGGGG 60.671 57.895 0.00 0.00 45.80 5.73
5891 9662 2.107041 AACATGACAAGCGTCGGGGA 62.107 55.000 0.00 0.00 45.80 4.81
5892 9663 2.100631 CATGACAAGCGTCGGGGAC 61.101 63.158 0.00 0.00 45.80 4.46
5910 9681 2.733820 ACGTAGTCTTCATCGTAGCG 57.266 50.000 0.00 0.00 29.74 4.26
5911 9682 1.329906 ACGTAGTCTTCATCGTAGCGG 59.670 52.381 0.00 0.00 29.74 5.52
5912 9683 1.329906 CGTAGTCTTCATCGTAGCGGT 59.670 52.381 0.00 0.00 0.00 5.68
5913 9684 2.717530 GTAGTCTTCATCGTAGCGGTG 58.282 52.381 0.00 0.00 39.56 4.94
5914 9685 0.179134 AGTCTTCATCGTAGCGGTGC 60.179 55.000 0.00 0.00 37.94 5.01
5915 9686 1.141019 TCTTCATCGTAGCGGTGCC 59.859 57.895 0.00 0.00 37.94 5.01
5916 9687 1.153647 CTTCATCGTAGCGGTGCCA 60.154 57.895 0.00 0.00 37.94 4.92
5917 9688 1.148157 CTTCATCGTAGCGGTGCCAG 61.148 60.000 0.00 0.00 37.94 4.85
5918 9689 3.264897 CATCGTAGCGGTGCCAGC 61.265 66.667 0.00 0.00 29.25 4.85
5919 9690 3.770040 ATCGTAGCGGTGCCAGCA 61.770 61.111 0.00 0.00 37.01 4.41
5920 9691 3.723235 ATCGTAGCGGTGCCAGCAG 62.723 63.158 0.00 0.00 37.01 4.24
5921 9692 4.742201 CGTAGCGGTGCCAGCAGT 62.742 66.667 0.00 0.00 37.01 4.40
5922 9693 3.121030 GTAGCGGTGCCAGCAGTG 61.121 66.667 0.00 0.00 37.01 3.66
5935 9706 2.014857 CAGCAGTGGATGACTTCATGG 58.985 52.381 0.00 0.00 36.57 3.66
5936 9707 0.737219 GCAGTGGATGACTTCATGGC 59.263 55.000 0.00 0.00 36.57 4.40
5937 9708 1.386533 CAGTGGATGACTTCATGGCC 58.613 55.000 0.00 0.00 36.57 5.36
5938 9709 1.064906 CAGTGGATGACTTCATGGCCT 60.065 52.381 3.32 0.00 36.57 5.19
5939 9710 1.064906 AGTGGATGACTTCATGGCCTG 60.065 52.381 3.32 0.00 36.57 4.85
5940 9711 0.256752 TGGATGACTTCATGGCCTGG 59.743 55.000 3.32 0.00 36.57 4.45
5941 9712 1.105759 GGATGACTTCATGGCCTGGC 61.106 60.000 11.05 11.05 36.57 4.85
5942 9713 0.106819 GATGACTTCATGGCCTGGCT 60.107 55.000 19.68 0.00 36.57 4.75
5943 9714 0.333993 ATGACTTCATGGCCTGGCTT 59.666 50.000 19.68 3.56 34.83 4.35
5944 9715 0.322816 TGACTTCATGGCCTGGCTTC 60.323 55.000 19.68 2.99 0.00 3.86
5945 9716 0.034670 GACTTCATGGCCTGGCTTCT 60.035 55.000 19.68 0.17 0.00 2.85
5946 9717 0.407139 ACTTCATGGCCTGGCTTCTT 59.593 50.000 19.68 0.00 0.00 2.52
5947 9718 0.815734 CTTCATGGCCTGGCTTCTTG 59.184 55.000 19.68 11.06 0.00 3.02
5948 9719 1.252904 TTCATGGCCTGGCTTCTTGC 61.253 55.000 19.68 0.54 41.94 4.01
5949 9720 1.980232 CATGGCCTGGCTTCTTGCA 60.980 57.895 19.68 7.09 45.15 4.08
5950 9721 1.001248 ATGGCCTGGCTTCTTGCAT 59.999 52.632 19.68 9.28 45.15 3.96
5951 9722 0.259647 ATGGCCTGGCTTCTTGCATA 59.740 50.000 19.68 0.00 45.15 3.14
5952 9723 0.039472 TGGCCTGGCTTCTTGCATAA 59.961 50.000 19.68 0.00 45.15 1.90
5953 9724 1.342275 TGGCCTGGCTTCTTGCATAAT 60.342 47.619 19.68 0.00 45.15 1.28
5954 9725 1.758862 GGCCTGGCTTCTTGCATAATT 59.241 47.619 19.68 0.00 45.15 1.40
5955 9726 2.482490 GGCCTGGCTTCTTGCATAATTG 60.482 50.000 19.68 0.00 45.15 2.32
5956 9727 2.428171 GCCTGGCTTCTTGCATAATTGA 59.572 45.455 12.43 0.00 45.15 2.57
5957 9728 3.736126 GCCTGGCTTCTTGCATAATTGAC 60.736 47.826 12.43 0.00 45.15 3.18
5958 9729 3.444742 CCTGGCTTCTTGCATAATTGACA 59.555 43.478 0.00 0.00 45.15 3.58
5959 9730 4.439700 CCTGGCTTCTTGCATAATTGACAG 60.440 45.833 0.00 0.00 45.15 3.51
5960 9731 3.119388 TGGCTTCTTGCATAATTGACAGC 60.119 43.478 0.00 0.00 45.15 4.40
5961 9732 3.103738 GCTTCTTGCATAATTGACAGCG 58.896 45.455 0.00 0.00 42.31 5.18
5962 9733 3.426695 GCTTCTTGCATAATTGACAGCGT 60.427 43.478 0.00 0.00 42.31 5.07
5963 9734 3.745332 TCTTGCATAATTGACAGCGTG 57.255 42.857 0.00 0.00 0.00 5.34
5964 9735 2.419673 TCTTGCATAATTGACAGCGTGG 59.580 45.455 0.00 0.00 0.00 4.94
5965 9736 0.451383 TGCATAATTGACAGCGTGGC 59.549 50.000 0.00 0.00 0.00 5.01
5966 9737 0.248621 GCATAATTGACAGCGTGGCC 60.249 55.000 0.00 0.00 0.00 5.36
5967 9738 1.382522 CATAATTGACAGCGTGGCCT 58.617 50.000 3.32 0.00 0.00 5.19
5968 9739 1.745087 CATAATTGACAGCGTGGCCTT 59.255 47.619 3.32 0.00 0.00 4.35
5969 9740 1.448985 TAATTGACAGCGTGGCCTTC 58.551 50.000 3.32 0.00 0.00 3.46
5970 9741 0.250901 AATTGACAGCGTGGCCTTCT 60.251 50.000 3.32 0.00 0.00 2.85
5971 9742 0.957395 ATTGACAGCGTGGCCTTCTG 60.957 55.000 3.32 10.97 0.00 3.02
5972 9743 2.031163 GACAGCGTGGCCTTCTGT 59.969 61.111 19.90 19.90 43.06 3.41
5973 9744 1.598130 GACAGCGTGGCCTTCTGTT 60.598 57.895 20.47 9.22 40.74 3.16
5974 9745 1.845809 GACAGCGTGGCCTTCTGTTG 61.846 60.000 20.47 11.32 40.74 3.33
5975 9746 2.281761 AGCGTGGCCTTCTGTTGG 60.282 61.111 3.32 0.00 0.00 3.77
5976 9747 2.281484 GCGTGGCCTTCTGTTGGA 60.281 61.111 3.32 0.00 0.00 3.53
5977 9748 1.896660 GCGTGGCCTTCTGTTGGAA 60.897 57.895 3.32 0.00 0.00 3.53
5987 9758 3.771577 TTCTGTTGGAAGAGGAGGAAC 57.228 47.619 0.00 0.00 0.00 3.62
5988 9759 1.978580 TCTGTTGGAAGAGGAGGAACC 59.021 52.381 0.00 0.00 39.35 3.62
5989 9760 1.699634 CTGTTGGAAGAGGAGGAACCA 59.300 52.381 0.00 0.00 42.04 3.67
5990 9761 2.106511 CTGTTGGAAGAGGAGGAACCAA 59.893 50.000 0.00 0.00 42.04 3.67
5991 9762 2.951229 TTGGAAGAGGAGGAACCAAC 57.049 50.000 0.00 0.00 42.04 3.77
5992 9763 1.814429 TGGAAGAGGAGGAACCAACA 58.186 50.000 0.00 0.00 42.04 3.33
5993 9764 1.699634 TGGAAGAGGAGGAACCAACAG 59.300 52.381 0.00 0.00 42.04 3.16
5994 9765 1.978580 GGAAGAGGAGGAACCAACAGA 59.021 52.381 0.00 0.00 42.04 3.41
5995 9766 2.027653 GGAAGAGGAGGAACCAACAGAG 60.028 54.545 0.00 0.00 42.04 3.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
156 157 1.521457 TCAAATGCTAGAGGCGGCG 60.521 57.895 0.51 0.51 45.43 6.46
198 199 1.522580 GAGAAGGATGGAGCGGTGC 60.523 63.158 0.00 0.00 0.00 5.01
221 222 1.946081 TGTCTCTGCTGCTCGAGATAG 59.054 52.381 18.75 14.37 38.43 2.08
228 229 0.510359 CGTTGTTGTCTCTGCTGCTC 59.490 55.000 0.00 0.00 0.00 4.26
257 259 4.469586 GGGCCAGAATAAATTGGGAAAGAA 59.530 41.667 4.39 0.00 34.96 2.52
263 265 3.646534 AGAAGGGCCAGAATAAATTGGG 58.353 45.455 6.18 0.00 34.96 4.12
313 315 1.418755 GGAAACGACGCCACGAATC 59.581 57.895 0.00 2.44 37.03 2.52
332 334 1.969200 GAGAAGGGCGGGAGGTAACC 61.969 65.000 0.00 0.00 37.17 2.85
338 340 1.036707 CTAGAAGAGAAGGGCGGGAG 58.963 60.000 0.00 0.00 0.00 4.30
339 341 1.043673 GCTAGAAGAGAAGGGCGGGA 61.044 60.000 0.00 0.00 0.00 5.14
343 345 0.179097 CCGTGCTAGAAGAGAAGGGC 60.179 60.000 0.00 0.00 31.75 5.19
362 372 2.034179 GGTTTGCCAGAGTTACAACCAC 59.966 50.000 0.00 0.00 34.09 4.16
490 500 1.519455 GAAGGAGATGGTGTCGGCG 60.519 63.158 0.00 0.00 0.00 6.46
494 504 0.741221 GGTGCGAAGGAGATGGTGTC 60.741 60.000 0.00 0.00 0.00 3.67
567 583 2.126502 GGCCGTGTTGCCGAAATG 60.127 61.111 0.00 0.00 42.54 2.32
625 641 4.668289 ACACAATTCAAACCGTGTTCTTC 58.332 39.130 0.00 0.00 39.49 2.87
777 820 4.394712 CCGGTGTGGTCCAGAGGC 62.395 72.222 0.00 0.00 0.00 4.70
868 916 2.742372 CCGAGGTTTGGACTGGCG 60.742 66.667 0.00 0.00 0.00 5.69
869 917 1.376037 CTCCGAGGTTTGGACTGGC 60.376 63.158 0.00 0.00 0.00 4.85
943 993 2.851588 GATGGGAGGAGAGGGGGC 60.852 72.222 0.00 0.00 0.00 5.80
944 994 1.152139 GAGATGGGAGGAGAGGGGG 60.152 68.421 0.00 0.00 0.00 5.40
946 996 1.977129 GAATGAGATGGGAGGAGAGGG 59.023 57.143 0.00 0.00 0.00 4.30
947 997 2.975075 AGAATGAGATGGGAGGAGAGG 58.025 52.381 0.00 0.00 0.00 3.69
949 999 3.181413 CCCTAGAATGAGATGGGAGGAGA 60.181 52.174 0.00 0.00 40.23 3.71
950 1000 3.172339 CCCTAGAATGAGATGGGAGGAG 58.828 54.545 0.00 0.00 40.23 3.69
951 1001 2.524440 ACCCTAGAATGAGATGGGAGGA 59.476 50.000 3.13 0.00 40.23 3.71
952 1002 2.983296 ACCCTAGAATGAGATGGGAGG 58.017 52.381 3.13 0.00 40.23 4.30
953 1003 5.012561 CCTAAACCCTAGAATGAGATGGGAG 59.987 48.000 3.13 0.00 40.23 4.30
1378 1442 0.955919 CAGAACTTGGGGAAGTCGGC 60.956 60.000 0.00 0.00 31.53 5.54
1428 1499 1.399440 AGCAAGCAATCGCACAGTATG 59.601 47.619 0.00 0.00 42.27 2.39
1434 1505 0.798776 ACACTAGCAAGCAATCGCAC 59.201 50.000 0.00 0.00 42.27 5.34
1435 1506 1.522668 AACACTAGCAAGCAATCGCA 58.477 45.000 0.00 0.00 42.27 5.10
1441 1512 1.953686 GAACCCAAACACTAGCAAGCA 59.046 47.619 0.00 0.00 0.00 3.91
1468 1539 2.093658 CGTAGCACTGTTAATCCACCCT 60.094 50.000 0.00 0.00 0.00 4.34
1469 1540 2.277084 CGTAGCACTGTTAATCCACCC 58.723 52.381 0.00 0.00 0.00 4.61
1482 1553 0.165944 AGCGCAATTCAACGTAGCAC 59.834 50.000 11.47 0.00 0.00 4.40
1539 1615 2.443255 CCCTGCCCATACTGGTTCTAAT 59.557 50.000 0.00 0.00 35.17 1.73
1560 1636 4.391830 TCATGTGTTCCTTTCGCATCTAAC 59.608 41.667 0.00 0.00 34.42 2.34
1567 1647 4.213482 ACTTAAGTCATGTGTTCCTTTCGC 59.787 41.667 1.12 0.00 0.00 4.70
1597 1677 1.004044 ACATCTGAAACAGAGCAGGGG 59.996 52.381 7.50 0.00 44.08 4.79
1616 1696 7.975750 ACTTCAACTTAAAACAGAACAGAGAC 58.024 34.615 0.00 0.00 0.00 3.36
1671 1752 4.081406 TCCAATCACAAATCCTTCCACTG 58.919 43.478 0.00 0.00 0.00 3.66
1745 1826 1.920574 CACCGACACATCTCGAACATC 59.079 52.381 0.00 0.00 35.58 3.06
1752 1833 1.472878 TGCTAGTCACCGACACATCTC 59.527 52.381 0.00 0.00 34.60 2.75
1754 1835 2.586258 ATGCTAGTCACCGACACATC 57.414 50.000 0.00 0.00 34.60 3.06
1757 1838 3.505464 ACTAATGCTAGTCACCGACAC 57.495 47.619 0.00 0.00 32.61 3.67
1846 1931 6.892456 TCAGACACATAAGTTCTCTAGGACAT 59.108 38.462 0.00 0.00 0.00 3.06
1897 1982 4.038271 TCCACAATGAGAAAATGGAGCT 57.962 40.909 0.00 0.00 34.50 4.09
2113 2198 5.826643 ACATATAACAGGGGAAAGCAGAAA 58.173 37.500 0.00 0.00 0.00 2.52
2197 2282 3.891432 AAGGTAGGGGGCTGCTGGT 62.891 63.158 0.00 0.00 0.00 4.00
2457 2546 6.427150 TGAGCAACATTTCTTTTACTTCGTC 58.573 36.000 0.00 0.00 0.00 4.20
2606 2700 8.821817 TGCTACAACCTGGCATATAAATATAGA 58.178 33.333 0.00 0.00 0.00 1.98
2608 2702 8.379331 TGTGCTACAACCTGGCATATAAATATA 58.621 33.333 0.00 0.00 38.27 0.86
2609 2703 7.230747 TGTGCTACAACCTGGCATATAAATAT 58.769 34.615 0.00 0.00 38.27 1.28
2619 2713 2.352503 CAAATGTGCTACAACCTGGC 57.647 50.000 0.00 0.00 0.00 4.85
2713 2807 1.871039 TCAACTTTCTTTTCGGCCTCG 59.129 47.619 0.00 0.00 37.82 4.63
2832 2926 6.914215 CAGGCATAGCACAAACAATGTAATAG 59.086 38.462 0.00 0.00 41.46 1.73
2885 2979 3.530535 ACATTGGGTGCAACTTTGTTTC 58.469 40.909 0.00 0.00 36.74 2.78
2889 2983 4.961435 AAAAACATTGGGTGCAACTTTG 57.039 36.364 0.00 0.00 36.74 2.77
3039 3135 2.164219 ACGAAATGATGGACATGGCAAC 59.836 45.455 0.00 0.00 39.39 4.17
3043 3139 4.635765 ACAGTTACGAAATGATGGACATGG 59.364 41.667 0.00 0.00 39.39 3.66
3134 3230 6.202954 ACTTATTAATTCGGTAGACAGCATGC 59.797 38.462 10.51 10.51 42.53 4.06
3290 3391 6.206048 CCATTGAAAGCAGCATATATGACTGA 59.794 38.462 27.23 14.13 35.44 3.41
3322 3423 0.613853 AGTACGCACTAAGCCTCCCA 60.614 55.000 0.00 0.00 41.38 4.37
3374 3476 7.155328 GTCATACATAACTGGGATTGGACTAG 58.845 42.308 0.00 0.00 0.00 2.57
3599 3701 3.206150 CAAGTGTTAGTGGCTCACAAGT 58.794 45.455 7.86 0.00 36.74 3.16
3635 3737 2.495669 TCGGATTTTTCTGCCCAATTCC 59.504 45.455 0.00 0.00 0.00 3.01
3743 3845 6.238484 GCATTGTAGCCACTATTAAAGGTCAG 60.238 42.308 0.00 0.00 0.00 3.51
3822 3925 3.195661 ACGAAAAGGGAGAATCGTATGC 58.804 45.455 0.00 0.00 45.69 3.14
3827 3930 6.663944 AATTAAGACGAAAAGGGAGAATCG 57.336 37.500 0.00 0.00 40.90 3.34
4057 5395 1.270625 TGTGCAACTACCAGGTACAGC 60.271 52.381 0.00 0.82 38.04 4.40
4440 5806 5.449304 CATAGGAAAAACGTTCCAACAGAC 58.551 41.667 0.00 0.00 41.00 3.51
4451 5817 6.949578 ATTTGATTGTGCATAGGAAAAACG 57.050 33.333 0.00 0.00 0.00 3.60
4493 5894 9.317936 TGATTATAGTGTCATGTCATCTTGAAC 57.682 33.333 0.00 0.00 31.27 3.18
4513 5914 7.223193 CACATGATTTCCAAAACGCATGATTAT 59.777 33.333 17.10 1.18 37.24 1.28
4558 5967 7.231317 ACATCAAGAAACATGGACATTGTAAGT 59.769 33.333 0.00 0.00 0.00 2.24
4647 6058 1.986575 GCAAAGAGATGCTCACGGGC 61.987 60.000 0.00 0.00 43.06 6.13
4706 6120 1.208293 GAGGACTGTCCACCAGATTCC 59.792 57.143 27.48 0.00 44.49 3.01
4795 6216 1.754226 CTTAGGACCAGCTGAGGAGAC 59.246 57.143 17.39 0.00 0.00 3.36
4796 6217 1.342474 CCTTAGGACCAGCTGAGGAGA 60.342 57.143 17.39 0.00 0.00 3.71
4798 6219 0.710588 TCCTTAGGACCAGCTGAGGA 59.289 55.000 17.39 15.36 0.00 3.71
4802 6223 6.591834 CGAATAATAATCCTTAGGACCAGCTG 59.408 42.308 6.78 6.78 32.98 4.24
4815 6236 9.965824 ATTTCAAACATGACCGAATAATAATCC 57.034 29.630 0.00 0.00 0.00 3.01
4823 6244 6.349611 CCTCTGAATTTCAAACATGACCGAAT 60.350 38.462 0.00 0.00 0.00 3.34
4825 6246 4.455533 CCTCTGAATTTCAAACATGACCGA 59.544 41.667 0.00 0.00 0.00 4.69
4826 6247 4.216257 ACCTCTGAATTTCAAACATGACCG 59.784 41.667 0.00 0.00 0.00 4.79
4828 6249 6.145535 GTGACCTCTGAATTTCAAACATGAC 58.854 40.000 0.00 0.00 0.00 3.06
4829 6250 5.241506 GGTGACCTCTGAATTTCAAACATGA 59.758 40.000 0.00 0.00 0.00 3.07
4830 6251 5.242393 AGGTGACCTCTGAATTTCAAACATG 59.758 40.000 0.00 0.00 0.00 3.21
4831 6252 5.388654 AGGTGACCTCTGAATTTCAAACAT 58.611 37.500 0.00 0.00 0.00 2.71
4941 6363 1.449778 GCTACCTCCTTTCACCGGC 60.450 63.158 0.00 0.00 0.00 6.13
5035 8384 9.890352 CTGAATATTTAGCAAAAGAATAGAGCC 57.110 33.333 0.00 0.00 0.00 4.70
5057 8406 0.318441 CAGAACCGAGACAGCCTGAA 59.682 55.000 0.00 0.00 0.00 3.02
5124 8496 2.084546 GCTGGACGTTAAGGCAGATTT 58.915 47.619 6.89 0.00 0.00 2.17
5138 8512 0.741326 TATCAGAGACAGCGCTGGAC 59.259 55.000 38.27 29.84 41.59 4.02
5151 8525 1.212688 CCAACCCACATGGCTATCAGA 59.787 52.381 0.00 0.00 37.83 3.27
5157 8531 1.533753 CAACCCAACCCACATGGCT 60.534 57.895 0.00 0.00 37.83 4.75
5167 8557 0.609681 TTATGACGGCCCAACCCAAC 60.610 55.000 0.00 0.00 33.26 3.77
5168 8558 0.333312 ATTATGACGGCCCAACCCAA 59.667 50.000 0.00 0.00 33.26 4.12
5169 8559 0.333312 AATTATGACGGCCCAACCCA 59.667 50.000 0.00 0.00 33.26 4.51
5170 8560 1.029681 GAATTATGACGGCCCAACCC 58.970 55.000 0.00 0.00 33.26 4.11
5171 8561 2.052782 AGAATTATGACGGCCCAACC 57.947 50.000 0.00 0.00 0.00 3.77
5172 8562 3.058224 GCATAGAATTATGACGGCCCAAC 60.058 47.826 0.00 0.00 39.22 3.77
5173 8563 3.146066 GCATAGAATTATGACGGCCCAA 58.854 45.455 0.00 0.00 39.22 4.12
5174 8564 2.552155 GGCATAGAATTATGACGGCCCA 60.552 50.000 0.00 0.00 39.22 5.36
5175 8565 2.084546 GGCATAGAATTATGACGGCCC 58.915 52.381 0.00 0.00 39.22 5.80
5176 8566 2.744202 CTGGCATAGAATTATGACGGCC 59.256 50.000 0.00 0.00 46.53 6.13
5177 8567 2.744202 CCTGGCATAGAATTATGACGGC 59.256 50.000 4.08 0.00 46.53 5.68
5180 8570 8.621532 TTTACATCCTGGCATAGAATTATGAC 57.378 34.615 0.00 0.00 44.27 3.06
5183 8573 9.401058 GCTATTTACATCCTGGCATAGAATTAT 57.599 33.333 0.00 0.00 0.00 1.28
5188 8578 5.823861 TGCTATTTACATCCTGGCATAGA 57.176 39.130 0.00 0.00 0.00 1.98
5227 8617 7.377398 CGGAATAAATATGCATTGGAATTCCA 58.623 34.615 23.63 23.63 45.94 3.53
5228 8618 6.311200 GCGGAATAAATATGCATTGGAATTCC 59.689 38.462 18.17 18.17 36.51 3.01
5229 8619 7.092716 AGCGGAATAAATATGCATTGGAATTC 58.907 34.615 3.54 9.82 0.00 2.17
5230 8620 6.996509 AGCGGAATAAATATGCATTGGAATT 58.003 32.000 3.54 0.42 0.00 2.17
5231 8621 6.594788 AGCGGAATAAATATGCATTGGAAT 57.405 33.333 3.54 0.00 0.00 3.01
5232 8622 6.040278 TGAAGCGGAATAAATATGCATTGGAA 59.960 34.615 3.54 0.00 0.00 3.53
5233 8623 5.534278 TGAAGCGGAATAAATATGCATTGGA 59.466 36.000 3.54 0.00 0.00 3.53
5234 8624 5.771469 TGAAGCGGAATAAATATGCATTGG 58.229 37.500 3.54 0.00 0.00 3.16
5235 8625 8.239314 AGTATGAAGCGGAATAAATATGCATTG 58.761 33.333 3.54 0.00 0.00 2.82
5236 8626 8.340618 AGTATGAAGCGGAATAAATATGCATT 57.659 30.769 3.54 0.00 0.00 3.56
5237 8627 7.928307 AGTATGAAGCGGAATAAATATGCAT 57.072 32.000 3.79 3.79 0.00 3.96
5238 8628 7.661437 AGAAGTATGAAGCGGAATAAATATGCA 59.339 33.333 0.00 0.00 0.00 3.96
5239 8629 8.034058 AGAAGTATGAAGCGGAATAAATATGC 57.966 34.615 0.00 0.00 0.00 3.14
5249 8639 3.321111 GGGTGATAGAAGTATGAAGCGGA 59.679 47.826 0.00 0.00 0.00 5.54
5256 8646 5.520632 CACTACACGGGTGATAGAAGTATG 58.479 45.833 0.00 0.00 36.89 2.39
5261 8651 2.453521 AGCACTACACGGGTGATAGAA 58.546 47.619 0.00 0.00 36.89 2.10
5263 8653 2.950309 AGTAGCACTACACGGGTGATAG 59.050 50.000 0.00 0.00 36.46 2.08
5264 8654 2.686405 CAGTAGCACTACACGGGTGATA 59.314 50.000 0.00 0.00 38.48 2.15
5265 8655 1.476891 CAGTAGCACTACACGGGTGAT 59.523 52.381 0.00 0.00 38.48 3.06
5266 8656 0.885879 CAGTAGCACTACACGGGTGA 59.114 55.000 0.00 0.00 38.48 4.02
5267 8657 0.736325 GCAGTAGCACTACACGGGTG 60.736 60.000 0.00 0.00 41.58 4.61
5268 8658 0.898789 AGCAGTAGCACTACACGGGT 60.899 55.000 10.30 0.00 45.49 5.28
5269 8659 0.246635 AAGCAGTAGCACTACACGGG 59.753 55.000 10.30 0.00 45.49 5.28
5270 8660 1.993370 GAAAGCAGTAGCACTACACGG 59.007 52.381 10.30 1.13 45.49 4.94
5271 8661 2.663602 CTGAAAGCAGTAGCACTACACG 59.336 50.000 10.30 2.37 45.49 4.49
5328 8720 1.774300 CCCAAGGCCCACTTTACCT 59.226 57.895 0.00 0.00 37.29 3.08
5346 8738 3.423154 CAGTTTCCTGGGCGACGC 61.423 66.667 12.43 12.43 34.90 5.19
5352 8744 1.675641 CCCGCTTCAGTTTCCTGGG 60.676 63.158 0.00 0.00 39.31 4.45
5356 8748 1.087501 CTAAGCCCGCTTCAGTTTCC 58.912 55.000 4.96 0.00 37.47 3.13
5380 8781 6.702282 GGAGATACTTCTACTCCAAAAATCGG 59.298 42.308 0.00 0.00 46.42 4.18
5390 8791 6.690194 TGTAAACGGGAGATACTTCTACTC 57.310 41.667 0.00 0.00 32.85 2.59
5414 8985 0.603975 GCTCCTTTCTGCTGTTCCGT 60.604 55.000 0.00 0.00 0.00 4.69
5420 8991 0.956633 TTTGCTGCTCCTTTCTGCTG 59.043 50.000 0.00 0.00 0.00 4.41
5452 9023 2.044135 GCAAGCTAGCACGTTTGTTTC 58.956 47.619 18.83 0.00 0.00 2.78
5454 9025 1.002468 CTGCAAGCTAGCACGTTTGTT 60.002 47.619 18.83 0.00 40.11 2.83
5456 9027 0.867746 TCTGCAAGCTAGCACGTTTG 59.132 50.000 18.83 13.43 40.11 2.93
5457 9028 1.466167 CATCTGCAAGCTAGCACGTTT 59.534 47.619 18.83 0.00 40.11 3.60
5458 9029 1.081892 CATCTGCAAGCTAGCACGTT 58.918 50.000 18.83 0.00 40.11 3.99
5459 9030 0.742281 CCATCTGCAAGCTAGCACGT 60.742 55.000 18.83 0.00 40.11 4.49
5460 9031 1.434622 CCCATCTGCAAGCTAGCACG 61.435 60.000 18.83 8.33 40.11 5.34
5461 9032 0.393537 ACCCATCTGCAAGCTAGCAC 60.394 55.000 18.83 6.48 40.11 4.40
5463 9034 0.393537 ACACCCATCTGCAAGCTAGC 60.394 55.000 6.62 6.62 0.00 3.42
5464 9035 1.209019 AGACACCCATCTGCAAGCTAG 59.791 52.381 0.00 0.00 0.00 3.42
5468 9039 2.189594 TTGAGACACCCATCTGCAAG 57.810 50.000 0.00 0.00 0.00 4.01
5469 9040 2.229792 GTTTGAGACACCCATCTGCAA 58.770 47.619 0.00 0.00 0.00 4.08
5470 9041 1.142667 TGTTTGAGACACCCATCTGCA 59.857 47.619 0.00 0.00 32.00 4.41
5472 9043 4.580167 TCTTTTGTTTGAGACACCCATCTG 59.420 41.667 0.00 0.00 38.18 2.90
5475 9046 5.656416 TCTTTCTTTTGTTTGAGACACCCAT 59.344 36.000 0.00 0.00 38.18 4.00
5476 9047 5.013547 TCTTTCTTTTGTTTGAGACACCCA 58.986 37.500 0.00 0.00 38.18 4.51
5477 9048 5.576447 TCTTTCTTTTGTTTGAGACACCC 57.424 39.130 0.00 0.00 38.18 4.61
5478 9049 7.883229 TTTTCTTTCTTTTGTTTGAGACACC 57.117 32.000 0.00 0.00 38.18 4.16
5479 9050 8.978539 AGTTTTTCTTTCTTTTGTTTGAGACAC 58.021 29.630 0.00 0.00 38.18 3.67
5480 9051 9.541143 AAGTTTTTCTTTCTTTTGTTTGAGACA 57.459 25.926 0.00 0.00 32.18 3.41
5481 9052 9.797473 CAAGTTTTTCTTTCTTTTGTTTGAGAC 57.203 29.630 0.00 0.00 33.63 3.36
5482 9053 9.757227 TCAAGTTTTTCTTTCTTTTGTTTGAGA 57.243 25.926 0.00 0.00 33.63 3.27
5484 9055 8.495148 GCTCAAGTTTTTCTTTCTTTTGTTTGA 58.505 29.630 0.00 0.00 33.63 2.69
5485 9056 8.498358 AGCTCAAGTTTTTCTTTCTTTTGTTTG 58.502 29.630 0.00 0.00 33.63 2.93
5486 9057 8.607441 AGCTCAAGTTTTTCTTTCTTTTGTTT 57.393 26.923 0.00 0.00 33.63 2.83
5487 9058 9.875691 ATAGCTCAAGTTTTTCTTTCTTTTGTT 57.124 25.926 0.00 0.00 33.63 2.83
5488 9059 9.305925 CATAGCTCAAGTTTTTCTTTCTTTTGT 57.694 29.630 0.00 0.00 33.63 2.83
5489 9060 8.271487 GCATAGCTCAAGTTTTTCTTTCTTTTG 58.729 33.333 0.00 0.00 33.63 2.44
5490 9061 8.200120 AGCATAGCTCAAGTTTTTCTTTCTTTT 58.800 29.630 0.00 0.00 30.62 2.27
5491 9062 7.720442 AGCATAGCTCAAGTTTTTCTTTCTTT 58.280 30.769 0.00 0.00 30.62 2.52
5492 9063 7.282332 AGCATAGCTCAAGTTTTTCTTTCTT 57.718 32.000 0.00 0.00 30.62 2.52
5493 9064 6.890979 AGCATAGCTCAAGTTTTTCTTTCT 57.109 33.333 0.00 0.00 30.62 2.52
5494 9065 7.141363 TGAAGCATAGCTCAAGTTTTTCTTTC 58.859 34.615 0.00 0.00 38.25 2.62
5495 9066 7.013655 TCTGAAGCATAGCTCAAGTTTTTCTTT 59.986 33.333 0.00 0.00 38.25 2.52
5496 9067 6.488006 TCTGAAGCATAGCTCAAGTTTTTCTT 59.512 34.615 0.00 0.00 38.25 2.52
5497 9068 6.000219 TCTGAAGCATAGCTCAAGTTTTTCT 59.000 36.000 0.00 0.00 38.25 2.52
5498 9069 6.246420 TCTGAAGCATAGCTCAAGTTTTTC 57.754 37.500 0.00 0.00 38.25 2.29
5499 9070 6.830873 ATCTGAAGCATAGCTCAAGTTTTT 57.169 33.333 0.00 0.00 38.25 1.94
5500 9071 7.065563 CAGTATCTGAAGCATAGCTCAAGTTTT 59.934 37.037 0.00 0.00 38.25 2.43
5501 9072 6.538021 CAGTATCTGAAGCATAGCTCAAGTTT 59.462 38.462 0.00 0.00 38.25 2.66
5502 9073 6.047870 CAGTATCTGAAGCATAGCTCAAGTT 58.952 40.000 0.00 0.00 38.25 2.66
5503 9074 5.453057 CCAGTATCTGAAGCATAGCTCAAGT 60.453 44.000 0.00 0.00 38.25 3.16
5504 9075 4.989797 CCAGTATCTGAAGCATAGCTCAAG 59.010 45.833 0.00 0.00 38.25 3.02
5505 9076 4.406972 ACCAGTATCTGAAGCATAGCTCAA 59.593 41.667 0.00 0.00 38.25 3.02
5506 9077 3.963374 ACCAGTATCTGAAGCATAGCTCA 59.037 43.478 0.00 0.00 38.25 4.26
5507 9078 4.280677 AGACCAGTATCTGAAGCATAGCTC 59.719 45.833 0.00 0.00 38.25 4.09
5508 9079 4.222336 AGACCAGTATCTGAAGCATAGCT 58.778 43.478 0.00 0.00 42.56 3.32
5509 9080 4.599047 AGACCAGTATCTGAAGCATAGC 57.401 45.455 0.00 0.00 32.44 2.97
5518 9089 5.815233 ATATTCCACCAGACCAGTATCTG 57.185 43.478 0.00 0.00 44.91 2.90
5519 9090 5.667626 ACAATATTCCACCAGACCAGTATCT 59.332 40.000 0.00 0.00 0.00 1.98
5520 9091 5.930135 ACAATATTCCACCAGACCAGTATC 58.070 41.667 0.00 0.00 0.00 2.24
5521 9092 5.975988 ACAATATTCCACCAGACCAGTAT 57.024 39.130 0.00 0.00 0.00 2.12
5522 9093 5.962031 AGTACAATATTCCACCAGACCAGTA 59.038 40.000 0.00 0.00 0.00 2.74
5523 9094 4.783227 AGTACAATATTCCACCAGACCAGT 59.217 41.667 0.00 0.00 0.00 4.00
5524 9095 5.359194 AGTACAATATTCCACCAGACCAG 57.641 43.478 0.00 0.00 0.00 4.00
5525 9096 6.042781 GGATAGTACAATATTCCACCAGACCA 59.957 42.308 0.00 0.00 0.00 4.02
5526 9097 6.465084 GGATAGTACAATATTCCACCAGACC 58.535 44.000 0.00 0.00 0.00 3.85
5527 9098 6.157211 CGGATAGTACAATATTCCACCAGAC 58.843 44.000 0.00 0.00 0.00 3.51
5528 9099 5.279306 GCGGATAGTACAATATTCCACCAGA 60.279 44.000 0.00 0.00 0.00 3.86
5531 9102 3.924686 CGCGGATAGTACAATATTCCACC 59.075 47.826 0.00 0.00 0.00 4.61
5548 9119 1.826921 GACCAGGTCTATCCGCGGA 60.827 63.158 33.12 33.12 41.99 5.54
5552 9123 4.022413 TCTATCTGACCAGGTCTATCCG 57.978 50.000 20.82 6.77 41.99 4.18
5720 9491 1.657822 TGCTGCAGTCGTGTTGTTTA 58.342 45.000 16.64 0.00 0.00 2.01
5758 9529 4.083696 ACGATGTGTATTCGGTGGAAAAAC 60.084 41.667 0.00 0.00 40.83 2.43
5763 9534 1.819903 TGACGATGTGTATTCGGTGGA 59.180 47.619 0.00 0.00 40.83 4.02
5809 9580 2.379005 TGGTATGCTGACTCATCGAGT 58.621 47.619 0.00 0.00 46.42 4.18
5810 9581 3.443099 TTGGTATGCTGACTCATCGAG 57.557 47.619 0.00 0.00 35.52 4.04
5811 9582 3.521560 GTTTGGTATGCTGACTCATCGA 58.478 45.455 0.00 0.00 0.00 3.59
5812 9583 2.609459 GGTTTGGTATGCTGACTCATCG 59.391 50.000 0.00 0.00 0.00 3.84
5813 9584 2.609459 CGGTTTGGTATGCTGACTCATC 59.391 50.000 0.00 0.00 0.00 2.92
5814 9585 2.632377 CGGTTTGGTATGCTGACTCAT 58.368 47.619 0.00 0.00 0.00 2.90
5815 9586 1.943968 GCGGTTTGGTATGCTGACTCA 60.944 52.381 0.00 0.00 0.00 3.41
5816 9587 0.727398 GCGGTTTGGTATGCTGACTC 59.273 55.000 0.00 0.00 0.00 3.36
5817 9588 0.036164 TGCGGTTTGGTATGCTGACT 59.964 50.000 0.00 0.00 0.00 3.41
5818 9589 1.064060 GATGCGGTTTGGTATGCTGAC 59.936 52.381 0.00 0.00 0.00 3.51
5819 9590 1.065491 AGATGCGGTTTGGTATGCTGA 60.065 47.619 0.00 0.00 0.00 4.26
5820 9591 1.331756 GAGATGCGGTTTGGTATGCTG 59.668 52.381 0.00 0.00 0.00 4.41
5821 9592 1.668419 GAGATGCGGTTTGGTATGCT 58.332 50.000 0.00 0.00 0.00 3.79
5822 9593 0.663153 GGAGATGCGGTTTGGTATGC 59.337 55.000 0.00 0.00 0.00 3.14
5823 9594 1.670811 GTGGAGATGCGGTTTGGTATG 59.329 52.381 0.00 0.00 0.00 2.39
5824 9595 1.408266 GGTGGAGATGCGGTTTGGTAT 60.408 52.381 0.00 0.00 0.00 2.73
5825 9596 0.035820 GGTGGAGATGCGGTTTGGTA 60.036 55.000 0.00 0.00 0.00 3.25
5826 9597 1.303317 GGTGGAGATGCGGTTTGGT 60.303 57.895 0.00 0.00 0.00 3.67
5827 9598 1.002134 AGGTGGAGATGCGGTTTGG 60.002 57.895 0.00 0.00 0.00 3.28
5828 9599 1.026718 GGAGGTGGAGATGCGGTTTG 61.027 60.000 0.00 0.00 0.00 2.93
5829 9600 1.201429 AGGAGGTGGAGATGCGGTTT 61.201 55.000 0.00 0.00 0.00 3.27
5830 9601 1.613630 AGGAGGTGGAGATGCGGTT 60.614 57.895 0.00 0.00 0.00 4.44
5831 9602 2.039624 AGGAGGTGGAGATGCGGT 59.960 61.111 0.00 0.00 0.00 5.68
5832 9603 2.801631 GGAGGAGGTGGAGATGCGG 61.802 68.421 0.00 0.00 0.00 5.69
5833 9604 1.333636 AAGGAGGAGGTGGAGATGCG 61.334 60.000 0.00 0.00 0.00 4.73
5834 9605 0.179936 CAAGGAGGAGGTGGAGATGC 59.820 60.000 0.00 0.00 0.00 3.91
5835 9606 1.577736 ACAAGGAGGAGGTGGAGATG 58.422 55.000 0.00 0.00 0.00 2.90
5836 9607 2.192263 GAACAAGGAGGAGGTGGAGAT 58.808 52.381 0.00 0.00 0.00 2.75
5837 9608 1.132849 TGAACAAGGAGGAGGTGGAGA 60.133 52.381 0.00 0.00 0.00 3.71
5838 9609 1.002544 GTGAACAAGGAGGAGGTGGAG 59.997 57.143 0.00 0.00 0.00 3.86
5839 9610 1.056660 GTGAACAAGGAGGAGGTGGA 58.943 55.000 0.00 0.00 0.00 4.02
5840 9611 0.320771 CGTGAACAAGGAGGAGGTGG 60.321 60.000 0.00 0.00 0.00 4.61
5841 9612 0.320771 CCGTGAACAAGGAGGAGGTG 60.321 60.000 0.71 0.00 31.21 4.00
5842 9613 0.471211 TCCGTGAACAAGGAGGAGGT 60.471 55.000 5.45 0.00 34.05 3.85
5843 9614 0.905357 ATCCGTGAACAAGGAGGAGG 59.095 55.000 13.88 0.00 42.05 4.30
5844 9615 1.406069 CCATCCGTGAACAAGGAGGAG 60.406 57.143 19.15 10.00 42.01 3.69
5845 9616 0.613260 CCATCCGTGAACAAGGAGGA 59.387 55.000 19.15 7.31 42.01 3.71
5846 9617 1.026718 GCCATCCGTGAACAAGGAGG 61.027 60.000 13.88 13.32 42.05 4.30
5847 9618 0.036010 AGCCATCCGTGAACAAGGAG 60.036 55.000 13.88 4.24 42.05 3.69
5848 9619 0.321564 CAGCCATCCGTGAACAAGGA 60.322 55.000 11.33 11.33 42.90 3.36
5849 9620 1.926511 GCAGCCATCCGTGAACAAGG 61.927 60.000 0.57 0.57 0.00 3.61
5850 9621 1.236616 TGCAGCCATCCGTGAACAAG 61.237 55.000 0.00 0.00 0.00 3.16
5851 9622 1.228094 TGCAGCCATCCGTGAACAA 60.228 52.632 0.00 0.00 0.00 2.83
5852 9623 1.672030 CTGCAGCCATCCGTGAACA 60.672 57.895 0.00 0.00 0.00 3.18
5853 9624 3.044059 GCTGCAGCCATCCGTGAAC 62.044 63.158 28.76 0.00 34.31 3.18
5854 9625 2.747460 GCTGCAGCCATCCGTGAA 60.747 61.111 28.76 0.00 34.31 3.18
5855 9626 3.549900 TTGCTGCAGCCATCCGTGA 62.550 57.895 34.64 11.80 41.18 4.35
5856 9627 3.057548 TTGCTGCAGCCATCCGTG 61.058 61.111 34.64 0.00 41.18 4.94
5857 9628 3.058160 GTTGCTGCAGCCATCCGT 61.058 61.111 34.64 0.00 41.18 4.69
5858 9629 2.412323 ATGTTGCTGCAGCCATCCG 61.412 57.895 34.64 0.00 41.18 4.18
5859 9630 1.141019 CATGTTGCTGCAGCCATCC 59.859 57.895 34.64 19.53 41.18 3.51
5860 9631 0.179145 GTCATGTTGCTGCAGCCATC 60.179 55.000 34.64 23.51 41.18 3.51
5861 9632 0.896479 TGTCATGTTGCTGCAGCCAT 60.896 50.000 34.64 26.99 41.18 4.40
5862 9633 1.108132 TTGTCATGTTGCTGCAGCCA 61.108 50.000 34.64 26.01 41.18 4.75
5863 9634 0.388134 CTTGTCATGTTGCTGCAGCC 60.388 55.000 34.64 21.13 41.18 4.85
5864 9635 1.007336 GCTTGTCATGTTGCTGCAGC 61.007 55.000 31.89 31.89 42.50 5.25
5865 9636 0.728129 CGCTTGTCATGTTGCTGCAG 60.728 55.000 10.11 10.11 0.00 4.41
5866 9637 1.283487 CGCTTGTCATGTTGCTGCA 59.717 52.632 0.00 0.00 0.00 4.41
5867 9638 0.727122 GACGCTTGTCATGTTGCTGC 60.727 55.000 0.00 0.00 42.41 5.25
5868 9639 0.451628 CGACGCTTGTCATGTTGCTG 60.452 55.000 0.00 0.00 43.03 4.41
5869 9640 1.568612 CCGACGCTTGTCATGTTGCT 61.569 55.000 0.00 0.00 43.03 3.91
5870 9641 1.154413 CCGACGCTTGTCATGTTGC 60.154 57.895 0.00 0.00 43.03 4.17
5871 9642 1.497278 CCCGACGCTTGTCATGTTG 59.503 57.895 0.00 0.00 43.03 3.33
5872 9643 1.671054 CCCCGACGCTTGTCATGTT 60.671 57.895 0.00 0.00 43.03 2.71
5873 9644 2.047274 CCCCGACGCTTGTCATGT 60.047 61.111 0.00 0.00 43.03 3.21
5874 9645 2.100631 GTCCCCGACGCTTGTCATG 61.101 63.158 0.00 0.00 43.03 3.07
5875 9646 2.264794 GTCCCCGACGCTTGTCAT 59.735 61.111 0.00 0.00 43.03 3.06
5884 9655 1.065251 GATGAAGACTACGTCCCCGAC 59.935 57.143 0.00 0.00 37.88 4.79
5885 9656 1.386533 GATGAAGACTACGTCCCCGA 58.613 55.000 0.00 0.00 37.88 5.14
5886 9657 0.029035 CGATGAAGACTACGTCCCCG 59.971 60.000 0.00 0.00 40.83 5.73
5887 9658 1.101331 ACGATGAAGACTACGTCCCC 58.899 55.000 0.00 0.00 33.80 4.81
5888 9659 2.286891 GCTACGATGAAGACTACGTCCC 60.287 54.545 0.00 0.00 39.59 4.46
5889 9660 2.599377 CGCTACGATGAAGACTACGTCC 60.599 54.545 0.00 0.00 39.59 4.79
5890 9661 2.599377 CCGCTACGATGAAGACTACGTC 60.599 54.545 0.00 0.00 39.59 4.34
5891 9662 1.329906 CCGCTACGATGAAGACTACGT 59.670 52.381 0.00 0.00 41.66 3.57
5892 9663 1.329906 ACCGCTACGATGAAGACTACG 59.670 52.381 0.00 0.00 0.00 3.51
5893 9664 2.717530 CACCGCTACGATGAAGACTAC 58.282 52.381 0.00 0.00 0.00 2.73
5894 9665 1.065102 GCACCGCTACGATGAAGACTA 59.935 52.381 0.00 0.00 0.00 2.59
5895 9666 0.179134 GCACCGCTACGATGAAGACT 60.179 55.000 0.00 0.00 0.00 3.24
5896 9667 1.146358 GGCACCGCTACGATGAAGAC 61.146 60.000 0.00 0.00 0.00 3.01
5897 9668 1.141019 GGCACCGCTACGATGAAGA 59.859 57.895 0.00 0.00 0.00 2.87
5898 9669 1.148157 CTGGCACCGCTACGATGAAG 61.148 60.000 0.00 0.00 0.00 3.02
5899 9670 1.153647 CTGGCACCGCTACGATGAA 60.154 57.895 0.00 0.00 0.00 2.57
5900 9671 2.494445 CTGGCACCGCTACGATGA 59.506 61.111 0.00 0.00 0.00 2.92
5901 9672 3.264897 GCTGGCACCGCTACGATG 61.265 66.667 0.00 0.00 0.00 3.84
5902 9673 3.723235 CTGCTGGCACCGCTACGAT 62.723 63.158 0.25 0.00 0.00 3.73
5903 9674 4.435436 CTGCTGGCACCGCTACGA 62.435 66.667 0.25 0.00 0.00 3.43
5904 9675 4.742201 ACTGCTGGCACCGCTACG 62.742 66.667 0.25 0.00 0.00 3.51
5905 9676 3.121030 CACTGCTGGCACCGCTAC 61.121 66.667 0.25 0.00 0.00 3.58
5906 9677 4.393155 CCACTGCTGGCACCGCTA 62.393 66.667 0.25 0.00 0.00 4.26
5909 9680 3.129502 CATCCACTGCTGGCACCG 61.130 66.667 0.00 0.00 37.49 4.94
5910 9681 2.042831 GTCATCCACTGCTGGCACC 61.043 63.158 0.00 0.00 37.49 5.01
5911 9682 0.607489 AAGTCATCCACTGCTGGCAC 60.607 55.000 0.00 0.00 37.49 5.01
5912 9683 0.321919 GAAGTCATCCACTGCTGGCA 60.322 55.000 0.00 0.00 37.49 4.92
5913 9684 0.321919 TGAAGTCATCCACTGCTGGC 60.322 55.000 0.00 0.00 37.49 4.85
5914 9685 2.014857 CATGAAGTCATCCACTGCTGG 58.985 52.381 0.00 0.00 39.23 4.85
5915 9686 2.014857 CCATGAAGTCATCCACTGCTG 58.985 52.381 0.00 0.00 34.56 4.41
5916 9687 1.681166 GCCATGAAGTCATCCACTGCT 60.681 52.381 0.00 0.00 34.56 4.24
5917 9688 0.737219 GCCATGAAGTCATCCACTGC 59.263 55.000 0.00 0.00 34.56 4.40
5918 9689 1.064906 AGGCCATGAAGTCATCCACTG 60.065 52.381 5.01 0.00 34.56 3.66
5919 9690 1.064906 CAGGCCATGAAGTCATCCACT 60.065 52.381 5.01 0.00 36.64 4.00
5920 9691 1.386533 CAGGCCATGAAGTCATCCAC 58.613 55.000 5.01 0.00 33.61 4.02
5921 9692 0.256752 CCAGGCCATGAAGTCATCCA 59.743 55.000 5.01 0.00 33.61 3.41
5922 9693 1.105759 GCCAGGCCATGAAGTCATCC 61.106 60.000 5.01 0.00 33.61 3.51
5923 9694 0.106819 AGCCAGGCCATGAAGTCATC 60.107 55.000 8.22 0.00 33.61 2.92
5924 9695 0.333993 AAGCCAGGCCATGAAGTCAT 59.666 50.000 8.22 0.00 36.96 3.06
5925 9696 0.322816 GAAGCCAGGCCATGAAGTCA 60.323 55.000 8.22 0.00 0.00 3.41
5926 9697 0.034670 AGAAGCCAGGCCATGAAGTC 60.035 55.000 8.22 0.00 0.00 3.01
5927 9698 0.407139 AAGAAGCCAGGCCATGAAGT 59.593 50.000 8.22 0.00 0.00 3.01
5928 9699 0.815734 CAAGAAGCCAGGCCATGAAG 59.184 55.000 8.22 0.00 0.00 3.02
5929 9700 1.252904 GCAAGAAGCCAGGCCATGAA 61.253 55.000 8.22 0.00 37.23 2.57
5930 9701 1.679977 GCAAGAAGCCAGGCCATGA 60.680 57.895 8.22 0.00 37.23 3.07
5931 9702 1.327690 ATGCAAGAAGCCAGGCCATG 61.328 55.000 8.22 3.29 44.83 3.66
5932 9703 0.259647 TATGCAAGAAGCCAGGCCAT 59.740 50.000 8.22 5.81 44.83 4.40
5933 9704 0.039472 TTATGCAAGAAGCCAGGCCA 59.961 50.000 8.22 0.00 44.83 5.36
5934 9705 1.406903 ATTATGCAAGAAGCCAGGCC 58.593 50.000 8.22 0.00 44.83 5.19
5935 9706 2.428171 TCAATTATGCAAGAAGCCAGGC 59.572 45.455 1.84 1.84 44.83 4.85
5936 9707 3.444742 TGTCAATTATGCAAGAAGCCAGG 59.555 43.478 0.00 0.00 44.83 4.45
5937 9708 4.669318 CTGTCAATTATGCAAGAAGCCAG 58.331 43.478 0.00 0.00 44.83 4.85
5938 9709 3.119388 GCTGTCAATTATGCAAGAAGCCA 60.119 43.478 0.00 0.00 44.83 4.75
5939 9710 3.442100 GCTGTCAATTATGCAAGAAGCC 58.558 45.455 0.00 0.00 44.83 4.35
5940 9711 3.103738 CGCTGTCAATTATGCAAGAAGC 58.896 45.455 0.00 0.00 45.96 3.86
5941 9712 4.093514 CACGCTGTCAATTATGCAAGAAG 58.906 43.478 0.00 0.00 0.00 2.85
5942 9713 3.119884 CCACGCTGTCAATTATGCAAGAA 60.120 43.478 0.00 0.00 0.00 2.52
5943 9714 2.419673 CCACGCTGTCAATTATGCAAGA 59.580 45.455 0.00 0.00 0.00 3.02
5944 9715 2.789208 CCACGCTGTCAATTATGCAAG 58.211 47.619 0.00 0.00 0.00 4.01
5945 9716 1.135431 GCCACGCTGTCAATTATGCAA 60.135 47.619 0.00 0.00 0.00 4.08
5946 9717 0.451383 GCCACGCTGTCAATTATGCA 59.549 50.000 0.00 0.00 0.00 3.96
5947 9718 0.248621 GGCCACGCTGTCAATTATGC 60.249 55.000 0.00 0.00 0.00 3.14
5948 9719 1.382522 AGGCCACGCTGTCAATTATG 58.617 50.000 5.01 0.00 0.00 1.90
5949 9720 2.017049 GAAGGCCACGCTGTCAATTAT 58.983 47.619 5.01 0.00 0.00 1.28
5950 9721 1.003118 AGAAGGCCACGCTGTCAATTA 59.997 47.619 5.01 0.00 0.00 1.40
5951 9722 0.250901 AGAAGGCCACGCTGTCAATT 60.251 50.000 5.01 0.00 0.00 2.32
5952 9723 0.957395 CAGAAGGCCACGCTGTCAAT 60.957 55.000 5.01 0.00 0.00 2.57
5953 9724 1.597854 CAGAAGGCCACGCTGTCAA 60.598 57.895 5.01 0.00 0.00 3.18
5954 9725 2.031012 CAGAAGGCCACGCTGTCA 59.969 61.111 5.01 0.00 0.00 3.58
5955 9726 1.598130 AACAGAAGGCCACGCTGTC 60.598 57.895 20.76 2.77 41.65 3.51
5956 9727 1.893808 CAACAGAAGGCCACGCTGT 60.894 57.895 16.52 16.52 44.15 4.40
5957 9728 2.620112 CCAACAGAAGGCCACGCTG 61.620 63.158 5.01 11.81 35.81 5.18
5958 9729 2.281761 CCAACAGAAGGCCACGCT 60.282 61.111 5.01 0.00 0.00 5.07
5959 9730 1.896660 TTCCAACAGAAGGCCACGC 60.897 57.895 5.01 0.00 0.00 5.34
5960 9731 4.473643 TTCCAACAGAAGGCCACG 57.526 55.556 5.01 0.00 0.00 4.94
5967 9738 2.372172 GGTTCCTCCTCTTCCAACAGAA 59.628 50.000 0.00 0.00 0.00 3.02
5968 9739 1.978580 GGTTCCTCCTCTTCCAACAGA 59.021 52.381 0.00 0.00 0.00 3.41
5969 9740 1.699634 TGGTTCCTCCTCTTCCAACAG 59.300 52.381 0.00 0.00 37.07 3.16
5970 9741 1.814429 TGGTTCCTCCTCTTCCAACA 58.186 50.000 0.00 0.00 37.07 3.33
5971 9742 2.505405 GTTGGTTCCTCCTCTTCCAAC 58.495 52.381 9.11 9.11 46.69 3.77
5972 9743 2.106511 CTGTTGGTTCCTCCTCTTCCAA 59.893 50.000 0.00 0.00 36.08 3.53
5973 9744 1.699634 CTGTTGGTTCCTCCTCTTCCA 59.300 52.381 0.00 0.00 37.07 3.53
5974 9745 1.978580 TCTGTTGGTTCCTCCTCTTCC 59.021 52.381 0.00 0.00 37.07 3.46
5975 9746 3.326836 CTCTGTTGGTTCCTCCTCTTC 57.673 52.381 0.00 0.00 37.07 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.