Multiple sequence alignment - TraesCS3D01G474700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G474700 chr3D 100.000 9412 0 0 1 9412 575672722 575682133 0.000000e+00 17381.0
1 TraesCS3D01G474700 chr3D 84.615 104 13 2 1062 1162 377894664 377894561 6.010000e-17 100.0
2 TraesCS3D01G474700 chr3D 89.189 74 8 0 374 447 597786122 597786049 1.010000e-14 93.5
3 TraesCS3D01G474700 chr3D 82.692 104 15 3 1062 1162 323256820 323256923 1.300000e-13 89.8
4 TraesCS3D01G474700 chr3B 92.279 4080 171 41 1955 5997 766613428 766617400 0.000000e+00 5657.0
5 TraesCS3D01G474700 chr3B 92.994 3126 131 32 6154 9229 766617398 766620485 0.000000e+00 4479.0
6 TraesCS3D01G474700 chr3B 95.753 1507 50 8 6154 7650 766130285 766128783 0.000000e+00 2416.0
7 TraesCS3D01G474700 chr3B 96.145 1375 43 8 3921 5289 766145172 766143802 0.000000e+00 2237.0
8 TraesCS3D01G474700 chr3B 90.826 1319 49 21 2603 3921 766146631 766145385 0.000000e+00 1700.0
9 TraesCS3D01G474700 chr3B 91.082 998 48 10 994 1961 766612352 766613338 0.000000e+00 1312.0
10 TraesCS3D01G474700 chr3B 96.673 541 18 0 5424 5964 766130840 766130300 0.000000e+00 900.0
11 TraesCS3D01G474700 chr3B 88.000 650 48 16 314 959 766611661 766612284 0.000000e+00 741.0
12 TraesCS3D01G474700 chr3B 93.926 461 24 3 8121 8581 766104294 766103838 0.000000e+00 693.0
13 TraesCS3D01G474700 chr3B 86.201 558 44 15 8700 9229 766103708 766103156 2.950000e-159 573.0
14 TraesCS3D01G474700 chr3B 95.876 291 12 0 7784 8074 766128572 766128282 1.110000e-128 472.0
15 TraesCS3D01G474700 chr3B 89.439 303 29 2 1 300 766611259 766611561 6.900000e-101 379.0
16 TraesCS3D01G474700 chr3B 96.403 139 5 0 5288 5426 766143688 766143550 7.350000e-56 230.0
17 TraesCS3D01G474700 chr3B 88.079 151 16 2 9228 9376 4554584 4554734 2.700000e-40 178.0
18 TraesCS3D01G474700 chr3B 94.175 103 6 0 660 762 766192060 766191958 3.520000e-34 158.0
19 TraesCS3D01G474700 chr3B 84.615 104 13 2 1062 1162 492215904 492215801 6.010000e-17 100.0
20 TraesCS3D01G474700 chr3B 96.667 60 2 0 8070 8129 766128183 766128124 6.010000e-17 100.0
21 TraesCS3D01G474700 chr3B 72.207 367 72 25 1062 1413 395917327 395916976 1.680000e-12 86.1
22 TraesCS3D01G474700 chr3A 90.630 3522 202 55 1 3463 711134918 711138370 0.000000e+00 4558.0
23 TraesCS3D01G474700 chr3A 95.780 2512 89 12 3495 5997 711138522 711141025 0.000000e+00 4036.0
24 TraesCS3D01G474700 chr3A 91.455 2481 124 41 6154 8581 711141023 711143468 0.000000e+00 3326.0
25 TraesCS3D01G474700 chr3A 85.558 457 37 15 8699 9136 711143599 711144045 1.440000e-122 451.0
26 TraesCS3D01G474700 chr3A 78.241 648 82 41 8072 8693 711049849 711049235 2.500000e-95 361.0
27 TraesCS3D01G474700 chr3A 85.577 104 12 2 1062 1162 501943615 501943512 1.290000e-18 106.0
28 TraesCS3D01G474700 chr3A 72.207 367 72 25 1062 1413 399895377 399895026 1.680000e-12 86.1
29 TraesCS3D01G474700 chr5A 77.962 1747 301 58 3530 5223 385551803 385550088 0.000000e+00 1016.0
30 TraesCS3D01G474700 chr5A 82.564 780 116 17 6266 7039 385549020 385548255 0.000000e+00 669.0
31 TraesCS3D01G474700 chr5A 82.071 647 88 22 5308 5947 385549945 385549320 2.330000e-145 527.0
32 TraesCS3D01G474700 chr5A 88.451 355 41 0 2990 3344 385552374 385552020 6.750000e-116 429.0
33 TraesCS3D01G474700 chr5A 78.420 519 84 20 2200 2704 385553238 385552734 7.100000e-81 313.0
34 TraesCS3D01G474700 chr5A 89.623 212 21 1 7410 7621 385547632 385547422 1.560000e-67 268.0
35 TraesCS3D01G474700 chr5A 90.110 182 16 2 5993 6173 653299437 653299617 1.580000e-57 235.0
36 TraesCS3D01G474700 chr5D 82.360 788 118 18 6254 7035 292769988 292769216 0.000000e+00 665.0
37 TraesCS3D01G474700 chr5D 82.972 646 84 20 5308 5947 292770904 292770279 2.300000e-155 560.0
38 TraesCS3D01G474700 chr5D 88.483 356 39 2 2990 3344 292773341 292772987 6.750000e-116 429.0
39 TraesCS3D01G474700 chr5D 84.658 365 47 8 3533 3893 292772766 292772407 1.160000e-93 355.0
40 TraesCS3D01G474700 chr5D 77.927 521 83 25 2200 2704 292774205 292773701 7.150000e-76 296.0
41 TraesCS3D01G474700 chr5D 89.151 212 22 1 7410 7621 292768589 292768379 7.250000e-66 263.0
42 TraesCS3D01G474700 chr5D 100.000 29 0 0 9382 9410 425998568 425998596 5.000000e-03 54.7
43 TraesCS3D01G474700 chr5B 81.934 786 125 14 6254 7035 334053302 334052530 0.000000e+00 649.0
44 TraesCS3D01G474700 chr5B 82.535 647 85 22 5308 5947 334054218 334053593 2.310000e-150 544.0
45 TraesCS3D01G474700 chr5B 86.600 403 46 6 2990 3390 334056654 334056258 1.120000e-118 438.0
46 TraesCS3D01G474700 chr5B 84.384 365 48 8 3533 3893 334056077 334055718 5.410000e-92 350.0
47 TraesCS3D01G474700 chr5B 85.185 324 45 3 7747 8070 334051517 334051197 7.050000e-86 329.0
48 TraesCS3D01G474700 chr5B 89.623 212 22 0 7410 7621 334051906 334051695 4.330000e-68 270.0
49 TraesCS3D01G474700 chr5B 86.792 159 17 4 9221 9376 710125766 710125923 3.490000e-39 174.0
50 TraesCS3D01G474700 chr2D 80.738 732 113 20 6266 6991 75637551 75638260 6.430000e-151 545.0
51 TraesCS3D01G474700 chr2D 78.500 800 138 24 3535 4308 75634659 75635450 2.360000e-135 494.0
52 TraesCS3D01G474700 chr2D 81.107 614 100 16 5339 5947 75636652 75637254 2.380000e-130 477.0
53 TraesCS3D01G474700 chr2D 88.424 311 36 0 2990 3300 75634084 75634394 8.920000e-100 375.0
54 TraesCS3D01G474700 chr2D 79.439 535 89 14 4689 5217 75635950 75636469 8.990000e-95 359.0
55 TraesCS3D01G474700 chr2D 91.061 179 10 5 5984 6159 556927103 556926928 4.390000e-58 237.0
56 TraesCS3D01G474700 chr2B 80.357 728 121 18 6266 6991 116340127 116339420 5.000000e-147 532.0
57 TraesCS3D01G474700 chr2B 78.446 798 140 23 3535 4308 116343044 116342255 8.490000e-135 492.0
58 TraesCS3D01G474700 chr2B 80.751 639 108 14 5316 5950 116341050 116340423 1.420000e-132 484.0
59 TraesCS3D01G474700 chr2B 87.859 313 38 0 2988 3300 116343618 116343306 1.490000e-97 368.0
60 TraesCS3D01G474700 chr2B 78.545 550 94 16 4689 5223 116341745 116341205 3.260000e-89 340.0
61 TraesCS3D01G474700 chr2B 96.078 51 2 0 7399 7449 96387846 96387796 6.060000e-12 84.2
62 TraesCS3D01G474700 chr2B 89.552 67 6 1 374 439 659653117 659653183 6.060000e-12 84.2
63 TraesCS3D01G474700 chr2B 100.000 29 0 0 9382 9410 740751712 740751740 5.000000e-03 54.7
64 TraesCS3D01G474700 chr2A 80.191 732 118 20 6266 6991 75568194 75567484 3.010000e-144 523.0
65 TraesCS3D01G474700 chr2A 78.250 800 140 23 3535 4308 75576904 75576113 5.110000e-132 483.0
66 TraesCS3D01G474700 chr2A 80.696 575 97 13 5380 5950 75569052 75568488 1.450000e-117 435.0
67 TraesCS3D01G474700 chr2A 87.781 311 38 0 2990 3300 75577480 75577170 1.930000e-96 364.0
68 TraesCS3D01G474700 chr2A 77.338 556 103 16 4689 5230 75575604 75575058 3.300000e-79 307.0
69 TraesCS3D01G474700 chr2A 88.079 151 16 2 9228 9376 717204683 717204833 2.700000e-40 178.0
70 TraesCS3D01G474700 chr2A 72.917 336 70 20 1091 1417 719273649 719273972 7.780000e-16 97.1
71 TraesCS3D01G474700 chr4A 82.263 327 48 8 14 332 503240048 503239724 3.350000e-69 274.0
72 TraesCS3D01G474700 chr4A 93.413 167 9 2 5996 6161 137966979 137967144 7.300000e-61 246.0
73 TraesCS3D01G474700 chr4A 93.413 167 9 2 5996 6161 137972830 137972665 7.300000e-61 246.0
74 TraesCS3D01G474700 chr4A 91.228 171 12 3 5982 6151 671932614 671932782 7.350000e-56 230.0
75 TraesCS3D01G474700 chr4A 88.889 153 14 3 9227 9376 719076178 719076330 1.610000e-42 185.0
76 TraesCS3D01G474700 chr4A 87.342 158 17 3 9222 9376 113866291 113866134 2.700000e-40 178.0
77 TraesCS3D01G474700 chr1D 81.356 354 51 11 7 353 110975901 110975556 3.350000e-69 274.0
78 TraesCS3D01G474700 chr1D 92.398 171 7 4 5993 6160 451226739 451226906 1.220000e-58 239.0
79 TraesCS3D01G474700 chr1D 94.030 67 2 2 6754 6820 211944526 211944590 6.010000e-17 100.0
80 TraesCS3D01G474700 chr1D 88.889 63 6 1 377 438 246471506 246471568 1.010000e-09 76.8
81 TraesCS3D01G474700 chr7A 81.957 327 51 6 12 331 700611091 700611416 4.330000e-68 270.0
82 TraesCS3D01G474700 chr7A 92.442 172 10 3 5981 6151 59406893 59407062 9.440000e-60 243.0
83 TraesCS3D01G474700 chr7A 88.158 152 15 3 9228 9376 709594246 709594095 2.700000e-40 178.0
84 TraesCS3D01G474700 chr6D 81.737 334 51 9 7 332 20134809 20134478 4.330000e-68 270.0
85 TraesCS3D01G474700 chr6D 81.050 343 54 9 12 347 315977075 315977413 7.250000e-66 263.0
86 TraesCS3D01G474700 chr7B 81.707 328 54 4 10 333 666418692 666419017 1.560000e-67 268.0
87 TraesCS3D01G474700 chr7B 88.235 153 15 3 9227 9376 85135186 85135034 7.510000e-41 180.0
88 TraesCS3D01G474700 chr7B 88.079 151 16 2 9228 9376 689976536 689976386 2.700000e-40 178.0
89 TraesCS3D01G474700 chr7B 86.301 73 9 1 374 445 612298810 612298738 2.820000e-10 78.7
90 TraesCS3D01G474700 chr4B 80.780 359 54 12 7 356 527122467 527122115 5.600000e-67 267.0
91 TraesCS3D01G474700 chr1A 91.061 179 13 3 5992 6169 540324071 540323895 1.220000e-58 239.0
92 TraesCS3D01G474700 chr1A 89.404 151 14 2 9228 9376 13799109 13798959 1.250000e-43 189.0
93 TraesCS3D01G474700 chr1A 87.143 70 8 1 374 442 345062034 345061965 2.820000e-10 78.7
94 TraesCS3D01G474700 chr6B 91.908 173 8 3 5986 6157 377935700 377935533 4.390000e-58 237.0
95 TraesCS3D01G474700 chr6B 86.667 75 8 2 377 450 277634758 277634685 2.180000e-11 82.4
96 TraesCS3D01G474700 chr1B 89.394 66 6 1 371 435 105201576 105201511 2.180000e-11 82.4
97 TraesCS3D01G474700 chr7D 100.000 31 0 0 9382 9412 77517690 77517660 3.670000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G474700 chr3D 575672722 575682133 9411 False 17381.000000 17381 100.000000 1 9412 1 chr3D.!!$F2 9411
1 TraesCS3D01G474700 chr3B 766611259 766620485 9226 False 2513.600000 5657 90.758800 1 9229 5 chr3B.!!$F2 9228
2 TraesCS3D01G474700 chr3B 766143550 766146631 3081 True 1389.000000 2237 94.458000 2603 5426 3 chr3B.!!$R6 2823
3 TraesCS3D01G474700 chr3B 766128124 766130840 2716 True 972.000000 2416 96.242250 5424 8129 4 chr3B.!!$R5 2705
4 TraesCS3D01G474700 chr3B 766103156 766104294 1138 True 633.000000 693 90.063500 8121 9229 2 chr3B.!!$R4 1108
5 TraesCS3D01G474700 chr3A 711134918 711144045 9127 False 3092.750000 4558 90.855750 1 9136 4 chr3A.!!$F1 9135
6 TraesCS3D01G474700 chr3A 711049235 711049849 614 True 361.000000 361 78.241000 8072 8693 1 chr3A.!!$R3 621
7 TraesCS3D01G474700 chr5A 385547422 385553238 5816 True 537.000000 1016 83.181833 2200 7621 6 chr5A.!!$R1 5421
8 TraesCS3D01G474700 chr5D 292768379 292774205 5826 True 428.000000 665 84.258500 2200 7621 6 chr5D.!!$R1 5421
9 TraesCS3D01G474700 chr5B 334051197 334056654 5457 True 430.000000 649 85.043500 2990 8070 6 chr5B.!!$R1 5080
10 TraesCS3D01G474700 chr2D 75634084 75638260 4176 False 450.000000 545 81.641600 2990 6991 5 chr2D.!!$F1 4001
11 TraesCS3D01G474700 chr2B 116339420 116343618 4198 True 443.200000 532 81.191600 2988 6991 5 chr2B.!!$R2 4003
12 TraesCS3D01G474700 chr2A 75567484 75569052 1568 True 479.000000 523 80.443500 5380 6991 2 chr2A.!!$R1 1611
13 TraesCS3D01G474700 chr2A 75575058 75577480 2422 True 384.666667 483 81.123000 2990 5230 3 chr2A.!!$R2 2240

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
597 689 0.179048 TGCCTCGCCTGAATGTATGG 60.179 55.000 0.00 0.0 0.0 2.74 F
1886 2060 0.396435 TCCTTCACAATGTCAGCGGT 59.604 50.000 0.00 0.0 0.0 5.68 F
2256 2535 0.605319 GATGGACGAGTTTGTGCCCA 60.605 55.000 0.00 0.0 0.0 5.36 F
2984 3396 0.478507 CTAACCCACCCATCCCATCC 59.521 60.000 0.00 0.0 0.0 3.51 F
3097 3513 0.608035 TGAACTCCATCCGGCAAACC 60.608 55.000 0.00 0.0 0.0 3.27 F
4087 4922 1.609208 ACATGGGTGCACTGTTCTTC 58.391 50.000 17.98 0.0 0.0 2.87 F
5372 6571 2.146342 AGAGCAACGGTGAATCAACTG 58.854 47.619 3.55 0.0 0.0 3.16 F
6112 7333 0.101759 TTGCTCCGTATGTAGTCCGC 59.898 55.000 0.00 0.0 0.0 5.54 F
7697 9465 0.030504 TGCAAGCATGACCAAACGTG 59.969 50.000 0.00 0.0 0.0 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2399 2681 0.319040 ACTCGCGCATACTGCTATGG 60.319 55.000 8.75 0.00 42.25 2.74 R
2984 3396 0.179043 AGCATCTCAGCTGCAGATGG 60.179 55.000 33.31 20.62 45.18 3.51 R
3559 4134 2.297315 CAGTCCACTTCAGCACTGTAGA 59.703 50.000 10.78 0.00 33.03 2.59 R
4547 5468 6.323739 CCATGGTGTTTAGGCTGGTATTATTT 59.676 38.462 2.57 0.00 0.00 1.40 R
5070 6049 4.482952 AAGGACCCTTTCTATTGGTACG 57.517 45.455 0.00 0.00 38.09 3.67 R
5657 6878 1.094785 CACCTGGCCTAAATGAACCG 58.905 55.000 3.32 0.00 0.00 4.44 R
6279 7705 0.742281 CCACAAGCTCCATGACCTCG 60.742 60.000 0.00 0.00 0.00 4.63 R
7776 9578 0.701731 TGGGAACACATGTTAGGGGG 59.298 55.000 0.00 0.00 38.56 5.40 R
9330 11380 0.036577 AGATGATATGCCGGCTCAGC 60.037 55.000 29.70 24.79 0.00 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 3.311966 GAGCAAATCCAACAAAGACAGC 58.688 45.455 0.00 0.00 0.00 4.40
61 62 2.053627 GCAAATCCAACAAAGACAGCG 58.946 47.619 0.00 0.00 0.00 5.18
83 87 1.934463 CAGACACACCTTCACACGC 59.066 57.895 0.00 0.00 0.00 5.34
115 119 2.149803 CTAGACGCACCACCGGAACA 62.150 60.000 9.46 0.00 0.00 3.18
129 133 0.694444 GGAACATGGGCTAGGAGGGA 60.694 60.000 0.00 0.00 0.00 4.20
160 164 2.688666 ATCTTCAGGGAGCCGCCA 60.689 61.111 0.00 0.00 38.95 5.69
201 206 7.041030 TGAGCAGGATACAAATCGTAACAAAAA 60.041 33.333 0.00 0.00 41.41 1.94
212 217 7.529357 AATCGTAACAAAAATCGAAGAAACG 57.471 32.000 0.00 0.00 43.58 3.60
223 228 9.724839 AAAAATCGAAGAAACGTCTAAAAATGA 57.275 25.926 0.00 0.00 43.58 2.57
232 237 2.683362 CGTCTAAAAATGAAGCCCTCCC 59.317 50.000 0.00 0.00 0.00 4.30
237 242 2.499303 AAATGAAGCCCTCCCACCGG 62.499 60.000 0.00 0.00 0.00 5.28
296 301 1.528776 ATAGGAGACGAGGCGGACC 60.529 63.158 0.00 0.00 0.00 4.46
357 448 3.652057 TTATTTTGGAGAGGAGGCAGG 57.348 47.619 0.00 0.00 0.00 4.85
426 517 0.834687 AGGTTTGCCTGACTCCGGTA 60.835 55.000 0.00 0.00 45.05 4.02
429 520 0.323629 TTTGCCTGACTCCGGTAAGG 59.676 55.000 0.00 5.73 45.10 2.69
430 521 0.543410 TTGCCTGACTCCGGTAAGGA 60.543 55.000 15.54 2.30 45.13 3.36
499 591 3.633573 AAAAAGCAAACCACGACCG 57.366 47.368 0.00 0.00 0.00 4.79
509 601 2.480555 CACGACCGGCATTCAAGC 59.519 61.111 0.00 0.00 0.00 4.01
510 602 2.031919 ACGACCGGCATTCAAGCA 59.968 55.556 0.00 0.00 35.83 3.91
527 619 3.650281 AGCACATCATATCCAACACCA 57.350 42.857 0.00 0.00 0.00 4.17
597 689 0.179048 TGCCTCGCCTGAATGTATGG 60.179 55.000 0.00 0.00 0.00 2.74
620 712 1.308998 CAGCCGTGTGAGGTTTCTTT 58.691 50.000 0.00 0.00 0.00 2.52
645 740 0.875059 GTGCTGCGGTTCTTAGCTTT 59.125 50.000 0.00 0.00 38.25 3.51
742 838 1.740025 GCGTACGTAGTTACCTGGAGT 59.260 52.381 17.90 0.00 37.78 3.85
747 843 5.392380 CGTACGTAGTTACCTGGAGTTGATT 60.392 44.000 7.22 0.00 37.78 2.57
748 844 5.069501 ACGTAGTTACCTGGAGTTGATTC 57.930 43.478 0.00 0.00 37.78 2.52
774 870 4.539881 GACGCGCTCCTCTCGGAC 62.540 72.222 5.73 0.00 34.92 4.79
822 918 4.360951 AGGAAAGTCATGGAAACCGTTA 57.639 40.909 0.00 0.00 0.00 3.18
829 925 4.161565 AGTCATGGAAACCGTTAGCAGATA 59.838 41.667 0.00 0.00 0.00 1.98
830 926 4.270325 GTCATGGAAACCGTTAGCAGATAC 59.730 45.833 0.00 0.00 0.00 2.24
831 927 2.883574 TGGAAACCGTTAGCAGATACG 58.116 47.619 0.00 0.00 37.50 3.06
832 928 2.231964 TGGAAACCGTTAGCAGATACGT 59.768 45.455 0.00 0.00 36.09 3.57
849 948 6.362016 CAGATACGTACTACTACTACAGACCG 59.638 46.154 0.00 0.00 0.00 4.79
856 955 5.251764 ACTACTACTACAGACCGAACACAT 58.748 41.667 0.00 0.00 0.00 3.21
893 993 4.389077 CCTTTCCAGATTACACAAGTCGTC 59.611 45.833 0.00 0.00 0.00 4.20
929 1029 1.918868 GCCAACTAAACCGCTTCCCG 61.919 60.000 0.00 0.00 0.00 5.14
1185 1318 2.047179 GTGCTCGACCACTTCCCC 60.047 66.667 3.54 0.00 33.02 4.81
1392 1525 4.549516 GAGGCCGAGGCGTACGTC 62.550 72.222 12.98 12.98 43.06 4.34
1485 1618 8.649973 AATTCTACTATAAGCTTTGTTCTCCG 57.350 34.615 3.20 0.00 0.00 4.63
1496 1633 1.860676 TGTTCTCCGTGTTTTCCTCG 58.139 50.000 0.00 0.00 0.00 4.63
1528 1665 3.100207 ACCCCAAACATCAACATAGGG 57.900 47.619 0.00 0.00 39.33 3.53
1556 1693 8.285394 CACCGATCTGATAAAATAATTGACCTG 58.715 37.037 0.00 0.00 0.00 4.00
1557 1694 8.210946 ACCGATCTGATAAAATAATTGACCTGA 58.789 33.333 0.00 0.00 0.00 3.86
1558 1695 8.715998 CCGATCTGATAAAATAATTGACCTGAG 58.284 37.037 0.00 0.00 0.00 3.35
1559 1696 9.481340 CGATCTGATAAAATAATTGACCTGAGA 57.519 33.333 0.00 0.00 0.00 3.27
1719 1889 4.036852 CACAATGTCAGGAGCTAGTCGATA 59.963 45.833 0.00 0.00 0.00 2.92
1720 1890 4.277174 ACAATGTCAGGAGCTAGTCGATAG 59.723 45.833 0.00 0.00 34.31 2.08
1797 1971 2.404789 GCACCGATTGACATGGCG 59.595 61.111 0.00 0.00 0.00 5.69
1859 2033 6.719370 ACATTACACCAAATAGGAAGCAGAAA 59.281 34.615 0.00 0.00 41.22 2.52
1886 2060 0.396435 TCCTTCACAATGTCAGCGGT 59.604 50.000 0.00 0.00 0.00 5.68
1917 2094 7.669722 TCAAGCCTCACAGGTAAATTAAATTCT 59.330 33.333 0.00 0.00 37.80 2.40
2089 2363 6.039829 CCCTTCAAGCCTTGAGGTAATTAATC 59.960 42.308 14.57 0.00 41.38 1.75
2090 2364 6.039829 CCTTCAAGCCTTGAGGTAATTAATCC 59.960 42.308 14.57 0.00 41.38 3.01
2093 2367 5.112129 AGCCTTGAGGTAATTAATCCGTT 57.888 39.130 0.00 0.00 37.57 4.44
2094 2368 5.506708 AGCCTTGAGGTAATTAATCCGTTT 58.493 37.500 0.00 0.00 37.57 3.60
2148 2426 9.653287 AAGAATATGTTGATCGTTTCACTCTTA 57.347 29.630 0.00 0.00 32.84 2.10
2173 2452 2.042686 TCATGATTACTGCACCTGGC 57.957 50.000 0.00 0.00 45.13 4.85
2190 2469 7.106239 GCACCTGGCAAGTATATACTGATATT 58.894 38.462 16.11 0.00 43.97 1.28
2256 2535 0.605319 GATGGACGAGTTTGTGCCCA 60.605 55.000 0.00 0.00 0.00 5.36
2539 2833 1.531578 GAAGGTTCGGTGCAGTTCTTC 59.468 52.381 0.00 0.00 0.00 2.87
2586 2893 7.856145 AAGCTCTAGTTATTTTGACCATCTG 57.144 36.000 0.00 0.00 0.00 2.90
2709 3041 0.817634 AAGGTGCGTGCAAACTAGCA 60.818 50.000 0.00 0.00 43.35 3.49
2719 3051 4.621068 TGCAAACTAGCAACAGATATGC 57.379 40.909 0.00 0.00 42.46 3.14
2720 3052 4.009002 TGCAAACTAGCAACAGATATGCA 58.991 39.130 0.00 0.00 46.22 3.96
2722 3054 5.048154 TGCAAACTAGCAACAGATATGCAAA 60.048 36.000 0.00 0.00 46.22 3.68
2732 3064 3.209410 CAGATATGCAAACTCTCCACCC 58.791 50.000 0.00 0.00 0.00 4.61
2739 3071 1.873591 CAAACTCTCCACCCAAGTTCG 59.126 52.381 0.00 0.00 32.24 3.95
2753 3134 3.006537 CCAAGTTCGAAGGGACTGACTTA 59.993 47.826 0.00 0.00 40.86 2.24
2915 3300 5.661458 AGAGTAACCACAGGTAATTCATCG 58.339 41.667 0.00 0.00 33.12 3.84
2916 3301 5.421056 AGAGTAACCACAGGTAATTCATCGA 59.579 40.000 0.00 0.00 33.12 3.59
2917 3302 5.416947 AGTAACCACAGGTAATTCATCGAC 58.583 41.667 0.00 0.00 33.12 4.20
2920 3305 4.442706 ACCACAGGTAATTCATCGACATC 58.557 43.478 0.00 0.00 32.11 3.06
2936 3321 5.962433 TCGACATCAAGGGAGTAAGTAAAG 58.038 41.667 0.00 0.00 0.00 1.85
2983 3395 1.518367 TCTAACCCACCCATCCCATC 58.482 55.000 0.00 0.00 0.00 3.51
2984 3396 0.478507 CTAACCCACCCATCCCATCC 59.521 60.000 0.00 0.00 0.00 3.51
3097 3513 0.608035 TGAACTCCATCCGGCAAACC 60.608 55.000 0.00 0.00 0.00 3.27
3112 3528 3.006752 GGCAAACCATTCACATTCTTGGA 59.993 43.478 0.00 0.00 35.26 3.53
3231 3647 2.390599 CCCGTGAACATGTGCTCGG 61.391 63.158 31.80 31.80 39.94 4.63
3300 3716 1.768275 TGACTTCTTGCAGGAGGTGAA 59.232 47.619 18.46 3.79 0.00 3.18
3308 3724 4.834496 TCTTGCAGGAGGTGAATTTCATTT 59.166 37.500 1.78 0.00 0.00 2.32
3349 3770 9.229784 CTTTCTGTAATTATGCATTTGCTACTG 57.770 33.333 3.54 6.51 42.66 2.74
3364 3785 8.519526 CATTTGCTACTGTAAAACCCTGAAATA 58.480 33.333 0.00 0.00 31.96 1.40
3404 3826 8.704234 CGAAATACAAAACTAGAGATATCTGGC 58.296 37.037 10.74 0.00 0.00 4.85
3430 3855 6.981762 TGTTTTGATGCAAAGTTTGTTGAT 57.018 29.167 16.70 6.98 34.72 2.57
3463 3888 8.162878 ACAGGCAGATCATCAACATATTTTAG 57.837 34.615 0.00 0.00 0.00 1.85
3493 3918 6.345298 TGTACATGATTTGCTCGGAGAAATA 58.655 36.000 9.69 0.00 34.09 1.40
3559 4134 8.579850 TTTTCTAATGCTAGGATCACAATTGT 57.420 30.769 4.92 4.92 0.00 2.71
3897 4473 2.134789 GGCAACTCAGGTGATTCCAT 57.865 50.000 0.00 0.00 39.02 3.41
4087 4922 1.609208 ACATGGGTGCACTGTTCTTC 58.391 50.000 17.98 0.00 0.00 2.87
4547 5468 3.081710 TCGTCCTGTCAAGAGGTATGA 57.918 47.619 0.00 0.00 34.36 2.15
4627 5597 2.632377 TGCCTAAGTGCAGTTGCTATC 58.368 47.619 17.21 2.57 42.66 2.08
4751 5727 3.928992 GGATATCACCACTGATGTATGCG 59.071 47.826 4.83 0.00 37.70 4.73
5231 6224 4.435137 TCTGGAAGAAACATTAGGAGGGA 58.565 43.478 0.00 0.00 42.31 4.20
5236 6229 7.116736 TGGAAGAAACATTAGGAGGGAATAAC 58.883 38.462 0.00 0.00 0.00 1.89
5243 6236 8.980481 AACATTAGGAGGGAATAACAATACAG 57.020 34.615 0.00 0.00 0.00 2.74
5259 6273 2.614829 ACAGCAACACTCGGTAAAGT 57.385 45.000 0.00 0.00 0.00 2.66
5372 6571 2.146342 AGAGCAACGGTGAATCAACTG 58.854 47.619 3.55 0.00 0.00 3.16
5449 6648 2.625639 ACACCTCTCTCCCTCACATTT 58.374 47.619 0.00 0.00 0.00 2.32
5489 6688 4.030216 TGTAGACATGCCAGAGGTATTCA 58.970 43.478 0.00 0.00 0.00 2.57
5569 6771 6.350110 GCAAATTCACCTATGTGTGTACCATT 60.350 38.462 0.00 0.00 43.26 3.16
5657 6878 3.010420 GGAACTGTTGAAGGGTATCAGC 58.990 50.000 0.00 0.00 0.00 4.26
6002 7223 9.051259 ACATCACATAATAAGCATATACTCCCT 57.949 33.333 0.00 0.00 0.00 4.20
6003 7224 9.539825 CATCACATAATAAGCATATACTCCCTC 57.460 37.037 0.00 0.00 0.00 4.30
6004 7225 8.079211 TCACATAATAAGCATATACTCCCTCC 57.921 38.462 0.00 0.00 0.00 4.30
6005 7226 6.980978 CACATAATAAGCATATACTCCCTCCG 59.019 42.308 0.00 0.00 0.00 4.63
6006 7227 6.668283 ACATAATAAGCATATACTCCCTCCGT 59.332 38.462 0.00 0.00 0.00 4.69
6007 7228 7.180408 ACATAATAAGCATATACTCCCTCCGTT 59.820 37.037 0.00 0.00 0.00 4.44
6008 7229 6.435292 AATAAGCATATACTCCCTCCGTTT 57.565 37.500 0.00 0.00 0.00 3.60
6009 7230 4.338379 AAGCATATACTCCCTCCGTTTC 57.662 45.455 0.00 0.00 0.00 2.78
6010 7231 3.577919 AGCATATACTCCCTCCGTTTCT 58.422 45.455 0.00 0.00 0.00 2.52
6011 7232 4.737578 AGCATATACTCCCTCCGTTTCTA 58.262 43.478 0.00 0.00 0.00 2.10
6012 7233 5.145564 AGCATATACTCCCTCCGTTTCTAA 58.854 41.667 0.00 0.00 0.00 2.10
6013 7234 5.601313 AGCATATACTCCCTCCGTTTCTAAA 59.399 40.000 0.00 0.00 0.00 1.85
6014 7235 6.270231 AGCATATACTCCCTCCGTTTCTAAAT 59.730 38.462 0.00 0.00 0.00 1.40
6015 7236 7.453752 AGCATATACTCCCTCCGTTTCTAAATA 59.546 37.037 0.00 0.00 0.00 1.40
6016 7237 8.258708 GCATATACTCCCTCCGTTTCTAAATAT 58.741 37.037 0.00 0.00 0.00 1.28
6020 7241 7.672122 ACTCCCTCCGTTTCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
6021 7242 7.724287 ACTCCCTCCGTTTCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
6022 7243 7.564292 ACTCCCTCCGTTTCTAAATATAAGTCT 59.436 37.037 0.00 0.00 0.00 3.24
6023 7244 8.315220 TCCCTCCGTTTCTAAATATAAGTCTT 57.685 34.615 0.00 0.00 0.00 3.01
6024 7245 8.765517 TCCCTCCGTTTCTAAATATAAGTCTTT 58.234 33.333 0.00 0.00 0.00 2.52
6025 7246 9.392259 CCCTCCGTTTCTAAATATAAGTCTTTT 57.608 33.333 0.00 0.00 0.00 2.27
6044 7265 9.713713 AGTCTTTTTAGAGATTTCAGTAAGGAC 57.286 33.333 0.00 0.00 0.00 3.85
6045 7266 9.713713 GTCTTTTTAGAGATTTCAGTAAGGACT 57.286 33.333 0.00 0.00 35.80 3.85
6052 7273 8.824756 AGAGATTTCAGTAAGGACTACATACA 57.175 34.615 0.00 0.00 33.32 2.29
6053 7274 8.908903 AGAGATTTCAGTAAGGACTACATACAG 58.091 37.037 0.00 0.00 33.32 2.74
6054 7275 8.824756 AGATTTCAGTAAGGACTACATACAGA 57.175 34.615 0.00 0.00 33.32 3.41
6055 7276 9.427821 AGATTTCAGTAAGGACTACATACAGAT 57.572 33.333 0.00 0.00 33.32 2.90
6098 7319 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
6099 7320 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
6100 7321 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
6101 7322 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
6102 7323 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
6103 7324 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
6104 7325 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
6105 7326 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
6106 7327 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
6107 7328 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
6108 7329 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
6109 7330 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
6110 7331 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
6111 7332 2.572191 TTTGCTCCGTATGTAGTCCG 57.428 50.000 0.00 0.00 0.00 4.79
6112 7333 0.101759 TTGCTCCGTATGTAGTCCGC 59.898 55.000 0.00 0.00 0.00 5.54
6113 7334 1.033202 TGCTCCGTATGTAGTCCGCA 61.033 55.000 0.00 0.00 0.00 5.69
6114 7335 0.314302 GCTCCGTATGTAGTCCGCAT 59.686 55.000 0.00 0.00 0.00 4.73
6115 7336 1.269621 GCTCCGTATGTAGTCCGCATT 60.270 52.381 0.00 0.00 0.00 3.56
6116 7337 2.030540 GCTCCGTATGTAGTCCGCATTA 60.031 50.000 0.00 0.00 0.00 1.90
6117 7338 3.822996 CTCCGTATGTAGTCCGCATTAG 58.177 50.000 0.00 0.00 0.00 1.73
6118 7339 3.479489 TCCGTATGTAGTCCGCATTAGA 58.521 45.455 0.00 0.00 0.00 2.10
6119 7340 3.884693 TCCGTATGTAGTCCGCATTAGAA 59.115 43.478 0.00 0.00 0.00 2.10
6120 7341 4.521639 TCCGTATGTAGTCCGCATTAGAAT 59.478 41.667 0.00 0.00 0.00 2.40
6121 7342 4.857588 CCGTATGTAGTCCGCATTAGAATC 59.142 45.833 0.00 0.00 0.00 2.52
6122 7343 5.335740 CCGTATGTAGTCCGCATTAGAATCT 60.336 44.000 0.00 0.00 0.00 2.40
6123 7344 5.795939 CGTATGTAGTCCGCATTAGAATCTC 59.204 44.000 0.00 0.00 0.00 2.75
6124 7345 6.348622 CGTATGTAGTCCGCATTAGAATCTCT 60.349 42.308 0.00 0.00 0.00 3.10
6125 7346 7.148457 CGTATGTAGTCCGCATTAGAATCTCTA 60.148 40.741 0.00 0.00 0.00 2.43
6126 7347 6.954487 TGTAGTCCGCATTAGAATCTCTAA 57.046 37.500 0.00 0.00 42.49 2.10
6127 7348 7.342769 TGTAGTCCGCATTAGAATCTCTAAA 57.657 36.000 0.50 0.00 41.72 1.85
6128 7349 7.778083 TGTAGTCCGCATTAGAATCTCTAAAA 58.222 34.615 0.50 0.00 41.72 1.52
6129 7350 8.255206 TGTAGTCCGCATTAGAATCTCTAAAAA 58.745 33.333 0.50 0.00 41.72 1.94
6130 7351 7.778470 AGTCCGCATTAGAATCTCTAAAAAG 57.222 36.000 0.50 0.00 41.72 2.27
6131 7352 7.556844 AGTCCGCATTAGAATCTCTAAAAAGA 58.443 34.615 0.50 0.00 41.72 2.52
6132 7353 7.492994 AGTCCGCATTAGAATCTCTAAAAAGAC 59.507 37.037 0.50 5.95 41.72 3.01
6133 7354 7.492994 GTCCGCATTAGAATCTCTAAAAAGACT 59.507 37.037 0.50 0.00 41.72 3.24
6134 7355 8.041323 TCCGCATTAGAATCTCTAAAAAGACTT 58.959 33.333 0.50 0.00 41.72 3.01
6135 7356 8.119226 CCGCATTAGAATCTCTAAAAAGACTTG 58.881 37.037 0.50 0.00 41.72 3.16
6136 7357 7.637907 CGCATTAGAATCTCTAAAAAGACTTGC 59.362 37.037 0.50 3.83 41.72 4.01
6137 7358 8.454106 GCATTAGAATCTCTAAAAAGACTTGCA 58.546 33.333 9.43 0.00 41.72 4.08
6143 7364 9.780413 GAATCTCTAAAAAGACTTGCATTTAGG 57.220 33.333 12.84 6.46 36.48 2.69
6144 7365 9.520515 AATCTCTAAAAAGACTTGCATTTAGGA 57.479 29.630 12.84 10.16 36.48 2.94
6145 7366 8.918202 TCTCTAAAAAGACTTGCATTTAGGAA 57.082 30.769 12.84 2.63 36.48 3.36
6146 7367 8.784043 TCTCTAAAAAGACTTGCATTTAGGAAC 58.216 33.333 12.84 0.00 36.48 3.62
6147 7368 7.581476 TCTAAAAAGACTTGCATTTAGGAACG 58.419 34.615 12.84 0.00 36.48 3.95
6148 7369 4.766404 AAAGACTTGCATTTAGGAACGG 57.234 40.909 0.00 0.00 0.00 4.44
6149 7370 3.695830 AGACTTGCATTTAGGAACGGA 57.304 42.857 0.00 0.00 0.00 4.69
6150 7371 3.600388 AGACTTGCATTTAGGAACGGAG 58.400 45.455 0.00 0.00 0.00 4.63
6151 7372 3.260884 AGACTTGCATTTAGGAACGGAGA 59.739 43.478 0.00 0.00 0.00 3.71
6152 7373 3.600388 ACTTGCATTTAGGAACGGAGAG 58.400 45.455 0.00 0.00 0.00 3.20
6279 7705 3.845178 TGGTACACAGATGTTCATCGAC 58.155 45.455 7.08 3.05 40.48 4.20
6315 7741 2.225017 TGTGGAGCTTTCCCCCTTAAAG 60.225 50.000 0.00 0.00 37.08 1.85
7022 8479 4.887071 TCTTGGTGGCATTATTGTCCATAC 59.113 41.667 0.00 3.28 33.54 2.39
7186 8862 5.886609 TCAAATGACCTATCCTTTCCAACA 58.113 37.500 0.00 0.00 0.00 3.33
7200 8876 1.684450 TCCAACACAGTACTCGCAGAA 59.316 47.619 0.00 0.00 34.09 3.02
7204 8880 3.454371 ACACAGTACTCGCAGAACTTT 57.546 42.857 0.00 0.00 34.09 2.66
7279 8955 3.119319 TCCCCCATATACTGCTGTCAAA 58.881 45.455 0.00 0.00 0.00 2.69
7306 8982 2.667473 ACACCGTAGTAATGGCACTC 57.333 50.000 0.00 0.00 34.84 3.51
7339 9015 2.681064 TTCTGGGGCATTGGCAGC 60.681 61.111 12.70 0.00 43.71 5.25
7407 9114 4.500716 CCATGTATTGAAATTAACCGGGGC 60.501 45.833 6.32 0.00 0.00 5.80
7586 9293 0.107017 ACTCGCCTTTGCCATATGCT 60.107 50.000 0.00 0.00 42.00 3.79
7612 9319 1.463444 GCAGGTACAGTTTACTTGGCG 59.537 52.381 0.00 0.00 0.00 5.69
7631 9338 9.012161 ACTTGGCGTAAACTTTATTATTTGGTA 57.988 29.630 0.00 0.00 0.00 3.25
7690 9458 3.380637 AGAAATCAGATGCAAGCATGACC 59.619 43.478 12.94 0.00 36.70 4.02
7691 9459 2.430248 ATCAGATGCAAGCATGACCA 57.570 45.000 12.94 0.00 36.70 4.02
7693 9461 2.516906 TCAGATGCAAGCATGACCAAA 58.483 42.857 12.94 0.00 36.70 3.28
7694 9462 2.229543 TCAGATGCAAGCATGACCAAAC 59.770 45.455 12.94 0.00 36.70 2.93
7695 9463 1.200716 AGATGCAAGCATGACCAAACG 59.799 47.619 12.94 0.00 36.70 3.60
7696 9464 0.961019 ATGCAAGCATGACCAAACGT 59.039 45.000 6.76 0.00 35.03 3.99
7697 9465 0.030504 TGCAAGCATGACCAAACGTG 59.969 50.000 0.00 0.00 0.00 4.49
7698 9466 4.537374 ATGCAAGCATGACCAAACGTGG 62.537 50.000 6.76 0.00 42.17 4.94
7776 9578 8.621286 TGGAGAGAAACAAAAGAACAATAAGTC 58.379 33.333 0.00 0.00 0.00 3.01
7792 9618 3.434940 AAGTCCCCCTAACATGTGTTC 57.565 47.619 0.00 0.00 39.31 3.18
8135 10072 6.998074 TCCCTAACATACATTCTAATTGGCTG 59.002 38.462 0.00 0.00 0.00 4.85
8381 10321 1.822371 GCTTTCCTCTTCGGACTCTCT 59.178 52.381 0.00 0.00 42.97 3.10
8446 10390 5.059833 ACCAAAGAAGACACATCTGAGTTC 58.940 41.667 0.00 0.00 34.48 3.01
8450 10394 6.516739 AAGAAGACACATCTGAGTTCGATA 57.483 37.500 0.00 0.00 34.48 2.92
8544 10520 0.613260 TCAATTGTACAGCCGAGCCT 59.387 50.000 5.13 0.00 0.00 4.58
8545 10521 1.828595 TCAATTGTACAGCCGAGCCTA 59.171 47.619 5.13 0.00 0.00 3.93
8546 10522 2.434336 TCAATTGTACAGCCGAGCCTAT 59.566 45.455 5.13 0.00 0.00 2.57
8565 10541 5.177696 GCCTATACAATTCCTAGAAACGCAG 59.822 44.000 0.00 0.00 0.00 5.18
8581 10558 1.763634 GCAGCAGCAAGTTCAGTTTC 58.236 50.000 0.00 0.00 41.58 2.78
8753 10770 6.304683 GCACTAACCAAATAAACATCGAACAC 59.695 38.462 0.00 0.00 0.00 3.32
8865 10906 2.695970 CCGACCTCTCTCCCTCCCT 61.696 68.421 0.00 0.00 0.00 4.20
8866 10907 1.152839 CGACCTCTCTCCCTCCCTC 60.153 68.421 0.00 0.00 0.00 4.30
8867 10908 1.231928 GACCTCTCTCCCTCCCTCC 59.768 68.421 0.00 0.00 0.00 4.30
8868 10909 2.306715 GACCTCTCTCCCTCCCTCCC 62.307 70.000 0.00 0.00 0.00 4.30
9101 11142 2.273179 CGTCGTCCACTCCTTCCCA 61.273 63.158 0.00 0.00 0.00 4.37
9172 11221 4.564782 TGGCATCTCTGAACTGAAGAAT 57.435 40.909 0.00 0.00 0.00 2.40
9189 11238 1.610522 GAATAGAATGGGCAGCGCAAT 59.389 47.619 17.19 8.19 0.00 3.56
9222 11272 4.014406 AGAAGTTCAGAAAAACGTTGGGT 58.986 39.130 0.00 0.00 34.27 4.51
9223 11273 5.065474 CAGAAGTTCAGAAAAACGTTGGGTA 59.935 40.000 0.00 0.00 34.27 3.69
9224 11274 4.888038 AGTTCAGAAAAACGTTGGGTAC 57.112 40.909 0.00 0.00 34.27 3.34
9225 11275 4.263435 AGTTCAGAAAAACGTTGGGTACA 58.737 39.130 0.00 0.00 34.27 2.90
9227 11277 5.358725 AGTTCAGAAAAACGTTGGGTACAAT 59.641 36.000 0.00 0.00 39.13 2.71
9230 11280 6.631962 TCAGAAAAACGTTGGGTACAATTTT 58.368 32.000 0.00 0.00 39.13 1.82
9231 11281 7.097834 TCAGAAAAACGTTGGGTACAATTTTT 58.902 30.769 0.00 0.00 39.55 1.94
9254 11304 1.784525 AACAGAGTACAGACGCAAGC 58.215 50.000 0.00 0.00 45.62 4.01
9255 11305 0.673985 ACAGAGTACAGACGCAAGCA 59.326 50.000 0.00 0.00 45.62 3.91
9256 11306 1.063806 CAGAGTACAGACGCAAGCAC 58.936 55.000 0.00 0.00 45.62 4.40
9257 11307 0.962489 AGAGTACAGACGCAAGCACT 59.038 50.000 0.00 0.00 45.62 4.40
9258 11308 1.068194 AGAGTACAGACGCAAGCACTC 60.068 52.381 0.00 0.00 45.62 3.51
9259 11309 0.673985 AGTACAGACGCAAGCACTCA 59.326 50.000 0.00 0.00 45.62 3.41
9260 11310 1.273606 AGTACAGACGCAAGCACTCAT 59.726 47.619 0.00 0.00 45.62 2.90
9261 11311 2.492088 AGTACAGACGCAAGCACTCATA 59.508 45.455 0.00 0.00 45.62 2.15
9262 11312 2.680312 ACAGACGCAAGCACTCATAT 57.320 45.000 0.00 0.00 45.62 1.78
9263 11313 3.801114 ACAGACGCAAGCACTCATATA 57.199 42.857 0.00 0.00 45.62 0.86
9264 11314 3.448686 ACAGACGCAAGCACTCATATAC 58.551 45.455 0.00 0.00 45.62 1.47
9265 11315 3.119137 ACAGACGCAAGCACTCATATACA 60.119 43.478 0.00 0.00 45.62 2.29
9266 11316 4.053983 CAGACGCAAGCACTCATATACAT 58.946 43.478 0.00 0.00 45.62 2.29
9267 11317 4.053983 AGACGCAAGCACTCATATACATG 58.946 43.478 0.00 0.00 45.62 3.21
9268 11318 2.545526 ACGCAAGCACTCATATACATGC 59.454 45.455 0.00 0.00 45.62 4.06
9269 11319 3.179010 GCAAGCACTCATATACATGCG 57.821 47.619 0.00 0.00 42.98 4.73
9270 11320 2.663879 GCAAGCACTCATATACATGCGC 60.664 50.000 0.00 0.00 42.98 6.09
9271 11321 2.531522 AGCACTCATATACATGCGCA 57.468 45.000 14.96 14.96 42.98 6.09
9272 11322 3.049708 AGCACTCATATACATGCGCAT 57.950 42.857 19.28 19.28 42.98 4.73
9273 11323 4.192429 AGCACTCATATACATGCGCATA 57.808 40.909 24.84 9.30 42.98 3.14
9274 11324 3.928992 AGCACTCATATACATGCGCATAC 59.071 43.478 24.84 0.00 42.98 2.39
9275 11325 3.679502 GCACTCATATACATGCGCATACA 59.320 43.478 24.84 14.18 31.73 2.29
9276 11326 4.434725 GCACTCATATACATGCGCATACAC 60.435 45.833 24.84 0.00 31.73 2.90
9277 11327 4.925646 CACTCATATACATGCGCATACACT 59.074 41.667 24.84 10.63 31.73 3.55
9278 11328 5.406477 CACTCATATACATGCGCATACACTT 59.594 40.000 24.84 8.99 31.73 3.16
9279 11329 6.586082 CACTCATATACATGCGCATACACTTA 59.414 38.462 24.84 10.91 31.73 2.24
9280 11330 6.586463 ACTCATATACATGCGCATACACTTAC 59.414 38.462 24.84 0.00 31.73 2.34
9281 11331 5.867174 TCATATACATGCGCATACACTTACC 59.133 40.000 24.84 0.00 31.73 2.85
9282 11332 1.663695 ACATGCGCATACACTTACCC 58.336 50.000 24.84 0.00 0.00 3.69
9283 11333 0.944386 CATGCGCATACACTTACCCC 59.056 55.000 24.84 0.00 0.00 4.95
9284 11334 0.837272 ATGCGCATACACTTACCCCT 59.163 50.000 24.02 0.00 0.00 4.79
9285 11335 0.107897 TGCGCATACACTTACCCCTG 60.108 55.000 5.66 0.00 0.00 4.45
9286 11336 0.107848 GCGCATACACTTACCCCTGT 60.108 55.000 0.30 0.00 0.00 4.00
9287 11337 1.651987 CGCATACACTTACCCCTGTG 58.348 55.000 0.00 0.00 39.80 3.66
9288 11338 1.206132 CGCATACACTTACCCCTGTGA 59.794 52.381 0.00 0.00 37.59 3.58
9289 11339 2.354303 CGCATACACTTACCCCTGTGAA 60.354 50.000 0.00 0.00 37.59 3.18
9290 11340 3.007635 GCATACACTTACCCCTGTGAAC 58.992 50.000 0.00 0.00 37.59 3.18
9291 11341 3.558321 GCATACACTTACCCCTGTGAACA 60.558 47.826 0.00 0.00 37.59 3.18
9292 11342 4.843728 CATACACTTACCCCTGTGAACAT 58.156 43.478 0.00 0.00 37.59 2.71
9293 11343 5.628200 GCATACACTTACCCCTGTGAACATA 60.628 44.000 0.00 0.00 37.59 2.29
9294 11344 6.591935 CATACACTTACCCCTGTGAACATAT 58.408 40.000 0.00 0.00 37.59 1.78
9295 11345 7.688328 GCATACACTTACCCCTGTGAACATATA 60.688 40.741 0.00 0.00 37.59 0.86
9296 11346 5.985911 ACACTTACCCCTGTGAACATATAC 58.014 41.667 0.00 0.00 37.59 1.47
9297 11347 5.486063 ACACTTACCCCTGTGAACATATACA 59.514 40.000 0.00 0.00 37.59 2.29
9298 11348 6.049149 CACTTACCCCTGTGAACATATACAG 58.951 44.000 0.00 0.00 42.97 2.74
9299 11349 3.560636 ACCCCTGTGAACATATACAGC 57.439 47.619 0.00 0.00 42.21 4.40
9300 11350 2.843730 ACCCCTGTGAACATATACAGCA 59.156 45.455 0.00 0.00 42.21 4.41
9301 11351 3.206150 CCCCTGTGAACATATACAGCAC 58.794 50.000 0.00 0.00 42.21 4.40
9302 11352 3.370421 CCCCTGTGAACATATACAGCACA 60.370 47.826 0.00 0.00 42.21 4.57
9303 11353 3.623060 CCCTGTGAACATATACAGCACAC 59.377 47.826 0.00 0.00 42.21 3.82
9304 11354 3.623060 CCTGTGAACATATACAGCACACC 59.377 47.826 0.00 0.00 42.21 4.16
9305 11355 3.605634 TGTGAACATATACAGCACACCC 58.394 45.455 0.00 0.00 34.85 4.61
9306 11356 3.263170 TGTGAACATATACAGCACACCCT 59.737 43.478 0.00 0.00 34.85 4.34
9307 11357 4.468153 TGTGAACATATACAGCACACCCTA 59.532 41.667 0.00 0.00 34.85 3.53
9308 11358 5.130311 TGTGAACATATACAGCACACCCTAT 59.870 40.000 0.00 0.00 34.85 2.57
9309 11359 5.696724 GTGAACATATACAGCACACCCTATC 59.303 44.000 0.00 0.00 0.00 2.08
9310 11360 4.891992 ACATATACAGCACACCCTATCC 57.108 45.455 0.00 0.00 0.00 2.59
9311 11361 4.493618 ACATATACAGCACACCCTATCCT 58.506 43.478 0.00 0.00 0.00 3.24
9312 11362 4.907875 ACATATACAGCACACCCTATCCTT 59.092 41.667 0.00 0.00 0.00 3.36
9313 11363 6.082031 ACATATACAGCACACCCTATCCTTA 58.918 40.000 0.00 0.00 0.00 2.69
9314 11364 6.730977 ACATATACAGCACACCCTATCCTTAT 59.269 38.462 0.00 0.00 0.00 1.73
9315 11365 3.845781 ACAGCACACCCTATCCTTATG 57.154 47.619 0.00 0.00 0.00 1.90
9316 11366 3.384168 ACAGCACACCCTATCCTTATGA 58.616 45.455 0.00 0.00 0.00 2.15
9317 11367 3.389329 ACAGCACACCCTATCCTTATGAG 59.611 47.826 0.00 0.00 0.00 2.90
9318 11368 2.370189 AGCACACCCTATCCTTATGAGC 59.630 50.000 0.00 0.00 0.00 4.26
9319 11369 2.104792 GCACACCCTATCCTTATGAGCA 59.895 50.000 0.00 0.00 0.00 4.26
9320 11370 3.733337 CACACCCTATCCTTATGAGCAC 58.267 50.000 0.00 0.00 0.00 4.40
9321 11371 2.706190 ACACCCTATCCTTATGAGCACC 59.294 50.000 0.00 0.00 0.00 5.01
9322 11372 2.975489 CACCCTATCCTTATGAGCACCT 59.025 50.000 0.00 0.00 0.00 4.00
9323 11373 3.007398 CACCCTATCCTTATGAGCACCTC 59.993 52.174 0.00 0.00 0.00 3.85
9324 11374 3.116551 ACCCTATCCTTATGAGCACCTCT 60.117 47.826 0.00 0.00 0.00 3.69
9325 11375 3.260380 CCCTATCCTTATGAGCACCTCTG 59.740 52.174 0.00 0.00 0.00 3.35
9326 11376 4.155709 CCTATCCTTATGAGCACCTCTGA 58.844 47.826 0.00 0.00 0.00 3.27
9327 11377 4.220382 CCTATCCTTATGAGCACCTCTGAG 59.780 50.000 0.00 0.00 0.00 3.35
9328 11378 3.388552 TCCTTATGAGCACCTCTGAGA 57.611 47.619 6.17 0.00 0.00 3.27
9329 11379 3.295093 TCCTTATGAGCACCTCTGAGAG 58.705 50.000 6.17 1.57 0.00 3.20
9346 11396 2.427320 GGCTGAGCCGGCATATCA 59.573 61.111 31.54 22.44 39.62 2.15
9347 11397 1.002868 GGCTGAGCCGGCATATCAT 60.003 57.895 31.54 6.18 39.62 2.45
9348 11398 1.023513 GGCTGAGCCGGCATATCATC 61.024 60.000 31.54 18.63 39.62 2.92
9349 11399 0.036577 GCTGAGCCGGCATATCATCT 60.037 55.000 31.54 4.27 35.55 2.90
9350 11400 1.610102 GCTGAGCCGGCATATCATCTT 60.610 52.381 31.54 3.33 35.55 2.40
9351 11401 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
9352 11402 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
9353 11403 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
9354 11404 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
9355 11405 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
9356 11406 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
9357 11407 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
9358 11408 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
9359 11409 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
9360 11410 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
9361 11411 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
9362 11412 6.034363 CGGCATATCATCTTGAGATTTACGAG 59.966 42.308 0.00 0.00 31.21 4.18
9363 11413 6.312426 GGCATATCATCTTGAGATTTACGAGG 59.688 42.308 0.00 0.00 31.21 4.63
9364 11414 6.870965 GCATATCATCTTGAGATTTACGAGGT 59.129 38.462 0.00 0.00 31.21 3.85
9365 11415 7.062839 GCATATCATCTTGAGATTTACGAGGTC 59.937 40.741 0.00 0.00 31.21 3.85
9366 11416 5.263968 TCATCTTGAGATTTACGAGGTCC 57.736 43.478 0.00 0.00 31.21 4.46
9367 11417 4.956700 TCATCTTGAGATTTACGAGGTCCT 59.043 41.667 0.00 0.00 31.21 3.85
9368 11418 4.985538 TCTTGAGATTTACGAGGTCCTC 57.014 45.455 9.05 9.05 0.00 3.71
9369 11419 6.014184 CATCTTGAGATTTACGAGGTCCTCG 61.014 48.000 34.59 34.59 44.97 4.63
9377 11427 3.109240 GAGGTCCTCGTAGGCGAC 58.891 66.667 2.28 0.00 42.81 5.19
9386 11436 4.711980 GTAGGCGACGACATCCAG 57.288 61.111 2.19 0.00 35.82 3.86
9387 11437 2.104267 GTAGGCGACGACATCCAGA 58.896 57.895 2.19 0.00 35.82 3.86
9388 11438 0.454600 GTAGGCGACGACATCCAGAA 59.545 55.000 2.19 0.00 35.82 3.02
9389 11439 1.135199 GTAGGCGACGACATCCAGAAA 60.135 52.381 2.19 0.00 35.82 2.52
9390 11440 0.537188 AGGCGACGACATCCAGAAAT 59.463 50.000 2.19 0.00 0.00 2.17
9391 11441 1.754803 AGGCGACGACATCCAGAAATA 59.245 47.619 2.19 0.00 0.00 1.40
9392 11442 2.167693 AGGCGACGACATCCAGAAATAA 59.832 45.455 2.19 0.00 0.00 1.40
9393 11443 3.131396 GGCGACGACATCCAGAAATAAT 58.869 45.455 0.00 0.00 0.00 1.28
9394 11444 3.059597 GGCGACGACATCCAGAAATAATG 60.060 47.826 0.00 0.00 0.00 1.90
9395 11445 3.604772 GCGACGACATCCAGAAATAATGC 60.605 47.826 0.00 0.00 0.00 3.56
9396 11446 3.362014 CGACGACATCCAGAAATAATGCG 60.362 47.826 0.00 0.00 0.00 4.73
9397 11447 3.792401 ACGACATCCAGAAATAATGCGA 58.208 40.909 0.00 0.00 0.00 5.10
9398 11448 3.804325 ACGACATCCAGAAATAATGCGAG 59.196 43.478 0.00 0.00 0.00 5.03
9399 11449 3.363378 CGACATCCAGAAATAATGCGAGC 60.363 47.826 0.00 0.00 0.00 5.03
9400 11450 3.544684 ACATCCAGAAATAATGCGAGCA 58.455 40.909 0.00 0.00 0.00 4.26
9401 11451 4.139786 ACATCCAGAAATAATGCGAGCAT 58.860 39.130 4.52 4.52 38.46 3.79
9402 11452 4.214971 ACATCCAGAAATAATGCGAGCATC 59.785 41.667 11.26 0.00 35.31 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 7.383029 TGTCGTTCTTCGTTTGTGTATCTTTAT 59.617 33.333 0.00 0.00 40.80 1.40
60 61 3.414700 GAAGGTGTGTCTGCGGCG 61.415 66.667 0.51 0.51 0.00 6.46
61 62 2.280797 TGAAGGTGTGTCTGCGGC 60.281 61.111 0.00 0.00 0.00 6.53
115 119 1.512735 GTTCTTCCCTCCTAGCCCAT 58.487 55.000 0.00 0.00 0.00 4.00
129 133 5.492524 TCCCTGAAGATGGAATAAGGTTCTT 59.507 40.000 0.00 0.00 0.00 2.52
160 164 2.920912 TCAGAAAGACGGGGCGGT 60.921 61.111 0.00 0.00 0.00 5.68
166 170 2.166459 TGTATCCTGCTCAGAAAGACGG 59.834 50.000 0.00 0.00 0.00 4.79
201 206 7.015877 GCTTCATTTTTAGACGTTTCTTCGAT 58.984 34.615 0.00 0.00 32.75 3.59
212 217 3.444034 GTGGGAGGGCTTCATTTTTAGAC 59.556 47.826 0.00 0.00 0.00 2.59
232 237 3.944250 ATCCCTGCCTTTGCCGGTG 62.944 63.158 1.90 0.00 40.03 4.94
237 242 1.000396 AGTGGATCCCTGCCTTTGC 60.000 57.895 9.90 0.00 38.26 3.68
257 262 1.524621 CCTTAGAGCCATGGGTGCG 60.525 63.158 23.86 6.29 0.00 5.34
296 301 4.925576 CTACCTACGCCGCTGCCG 62.926 72.222 0.00 0.00 0.00 5.69
300 305 2.518825 CCTCCTACCTACGCCGCT 60.519 66.667 0.00 0.00 0.00 5.52
312 403 0.417841 TTAGGGTTCCTCTGCCTCCT 59.582 55.000 0.00 0.00 34.61 3.69
357 448 1.372087 GCTATGCAGCCTCCACACAC 61.372 60.000 0.00 0.00 42.37 3.82
426 517 1.153229 GCCGTTATCGCCCTTCCTT 60.153 57.895 0.00 0.00 35.54 3.36
429 520 2.710724 ATCCGCCGTTATCGCCCTTC 62.711 60.000 0.00 0.00 35.54 3.46
430 521 2.710724 GATCCGCCGTTATCGCCCTT 62.711 60.000 0.00 0.00 35.54 3.95
482 574 1.731093 CCGGTCGTGGTTTGCTTTT 59.269 52.632 0.00 0.00 0.00 2.27
484 576 3.284449 GCCGGTCGTGGTTTGCTT 61.284 61.111 1.90 0.00 0.00 3.91
485 577 3.842925 ATGCCGGTCGTGGTTTGCT 62.843 57.895 1.90 0.00 0.00 3.91
486 578 2.796245 GAATGCCGGTCGTGGTTTGC 62.796 60.000 1.90 0.00 0.00 3.68
487 579 1.209127 GAATGCCGGTCGTGGTTTG 59.791 57.895 1.90 0.00 0.00 2.93
499 591 3.570975 TGGATATGATGTGCTTGAATGCC 59.429 43.478 0.00 0.00 0.00 4.40
509 601 4.272489 AGGTTGGTGTTGGATATGATGTG 58.728 43.478 0.00 0.00 0.00 3.21
510 602 4.591321 AGGTTGGTGTTGGATATGATGT 57.409 40.909 0.00 0.00 0.00 3.06
527 619 8.422577 AGCTCAAGTTTTATTTCCATTAGGTT 57.577 30.769 0.00 0.00 35.89 3.50
620 712 3.345808 GAACCGCAGCACTCGCAA 61.346 61.111 0.00 0.00 42.27 4.85
645 740 1.350071 ACATCAGGGCATGCCAAAAA 58.650 45.000 36.56 19.50 37.98 1.94
742 838 1.074319 GCGTCGGTAGCACGAATCAA 61.074 55.000 17.09 0.00 45.38 2.57
773 869 2.126417 CTCGGTCGTTGTGGTCGAGT 62.126 60.000 0.00 0.00 41.37 4.18
774 870 1.442184 CTCGGTCGTTGTGGTCGAG 60.442 63.158 0.00 0.00 40.68 4.04
822 918 6.922957 GTCTGTAGTAGTAGTACGTATCTGCT 59.077 42.308 15.70 15.70 33.97 4.24
829 925 4.720649 TCGGTCTGTAGTAGTAGTACGT 57.279 45.455 9.99 0.00 33.97 3.57
830 926 4.864806 TGTTCGGTCTGTAGTAGTAGTACG 59.135 45.833 9.99 5.89 33.97 3.67
831 927 5.639506 TGTGTTCGGTCTGTAGTAGTAGTAC 59.360 44.000 8.04 8.04 0.00 2.73
832 928 5.793817 TGTGTTCGGTCTGTAGTAGTAGTA 58.206 41.667 0.00 0.00 0.00 1.82
905 1005 1.971695 GCGGTTTAGTTGGCCAGCT 60.972 57.895 26.30 26.30 0.00 4.24
906 1006 1.524008 AAGCGGTTTAGTTGGCCAGC 61.524 55.000 12.39 12.39 0.00 4.85
907 1007 0.521735 GAAGCGGTTTAGTTGGCCAG 59.478 55.000 5.11 0.00 0.00 4.85
908 1008 0.891904 GGAAGCGGTTTAGTTGGCCA 60.892 55.000 0.00 0.00 0.00 5.36
909 1009 1.592400 GGGAAGCGGTTTAGTTGGCC 61.592 60.000 0.00 0.00 0.00 5.36
914 1014 3.430790 GGTTATACGGGAAGCGGTTTAGT 60.431 47.826 0.00 4.99 0.00 2.24
929 1029 1.876156 GCTGCATGCAGAGGGTTATAC 59.124 52.381 44.02 22.98 46.30 1.47
1472 1605 2.357952 GGAAAACACGGAGAACAAAGCT 59.642 45.455 0.00 0.00 0.00 3.74
1478 1611 1.861971 ACGAGGAAAACACGGAGAAC 58.138 50.000 0.00 0.00 37.49 3.01
1484 1617 3.257745 GGGTTTTACGAGGAAAACACG 57.742 47.619 21.06 0.00 46.57 4.49
1496 1633 5.304871 TGATGTTTGGGGTTTAGGGTTTTAC 59.695 40.000 0.00 0.00 0.00 2.01
1528 1665 7.078228 GTCAATTATTTTATCAGATCGGTGCC 58.922 38.462 0.00 0.00 0.00 5.01
1556 1693 5.643379 TTTGGCACAGACCATTATTTCTC 57.357 39.130 0.00 0.00 42.39 2.87
1557 1694 5.127682 GGATTTGGCACAGACCATTATTTCT 59.872 40.000 0.00 0.00 42.39 2.52
1558 1695 5.351458 GGATTTGGCACAGACCATTATTTC 58.649 41.667 0.00 0.00 42.39 2.17
1559 1696 4.142182 CGGATTTGGCACAGACCATTATTT 60.142 41.667 0.00 0.00 42.39 1.40
1719 1889 0.816018 AGCATCCTCGATCGACGTCT 60.816 55.000 15.15 4.39 43.13 4.18
1720 1890 0.384974 GAGCATCCTCGATCGACGTC 60.385 60.000 15.15 5.18 43.13 4.34
1721 1891 1.095807 TGAGCATCCTCGATCGACGT 61.096 55.000 15.15 0.00 41.13 4.34
1722 1892 0.658829 GTGAGCATCCTCGATCGACG 60.659 60.000 15.15 10.92 41.13 5.12
1723 1893 0.382158 TGTGAGCATCCTCGATCGAC 59.618 55.000 15.15 3.93 41.13 4.20
1724 1894 1.000938 CATGTGAGCATCCTCGATCGA 60.001 52.381 18.32 18.32 41.13 3.59
1725 1895 1.000938 TCATGTGAGCATCCTCGATCG 60.001 52.381 9.36 9.36 41.13 3.69
1726 1896 2.402305 GTCATGTGAGCATCCTCGATC 58.598 52.381 0.00 0.00 41.13 3.69
1727 1897 1.069823 GGTCATGTGAGCATCCTCGAT 59.930 52.381 7.29 0.00 41.13 3.59
1728 1898 0.461548 GGTCATGTGAGCATCCTCGA 59.538 55.000 7.29 0.00 41.13 4.04
1797 1971 5.163754 CCATTCCCTGTTTGAAGTCGATTAC 60.164 44.000 0.00 0.00 0.00 1.89
1859 2033 5.587844 GCTGACATTGTGAAGGACTGATATT 59.412 40.000 0.00 0.00 0.00 1.28
1886 2060 1.656587 ACCTGTGAGGCTTGATGGTA 58.343 50.000 0.00 0.00 39.63 3.25
1917 2094 5.656480 TGCAAACTCGTAGTAATATGCTGA 58.344 37.500 0.00 0.00 33.87 4.26
2093 2367 7.502226 TGGTAATGAGAAGAAGAAGAGCAAAAA 59.498 33.333 0.00 0.00 0.00 1.94
2094 2368 6.998074 TGGTAATGAGAAGAAGAAGAGCAAAA 59.002 34.615 0.00 0.00 0.00 2.44
2129 2403 9.731819 GATATACTAAGAGTGAAACGATCAACA 57.268 33.333 0.00 0.00 45.86 3.33
2144 2422 9.314133 AGGTGCAGTAATCATGATATACTAAGA 57.686 33.333 20.54 11.06 0.00 2.10
2148 2426 6.705302 CCAGGTGCAGTAATCATGATATACT 58.295 40.000 9.04 14.74 0.00 2.12
2165 2444 4.336889 TCAGTATATACTTGCCAGGTGC 57.663 45.455 12.87 0.00 35.74 5.01
2185 2464 8.506168 TGACATCTGTTGGGTTTCTTAATATC 57.494 34.615 0.00 0.00 0.00 1.63
2190 2469 4.651778 CCTGACATCTGTTGGGTTTCTTA 58.348 43.478 0.00 0.00 0.00 2.10
2202 2481 7.087409 TGTATGTTATTTTGCCTGACATCTG 57.913 36.000 0.00 0.00 33.42 2.90
2256 2535 2.444140 ATAAGCCGCCGACCTCCT 60.444 61.111 0.00 0.00 0.00 3.69
2399 2681 0.319040 ACTCGCGCATACTGCTATGG 60.319 55.000 8.75 0.00 42.25 2.74
2586 2893 5.293324 GTGTCAAACTTTTTGAAACATCCCC 59.707 40.000 14.48 0.00 36.81 4.81
2709 3041 4.265073 GGTGGAGAGTTTGCATATCTGTT 58.735 43.478 0.98 0.00 0.00 3.16
2712 3044 2.846206 TGGGTGGAGAGTTTGCATATCT 59.154 45.455 0.00 0.00 0.00 1.98
2713 3045 3.281727 TGGGTGGAGAGTTTGCATATC 57.718 47.619 0.00 0.00 0.00 1.63
2716 3048 1.145738 ACTTGGGTGGAGAGTTTGCAT 59.854 47.619 0.00 0.00 0.00 3.96
2718 3050 1.609072 GAACTTGGGTGGAGAGTTTGC 59.391 52.381 0.00 0.00 34.02 3.68
2719 3051 1.873591 CGAACTTGGGTGGAGAGTTTG 59.126 52.381 0.00 0.00 34.02 2.93
2720 3052 1.766496 TCGAACTTGGGTGGAGAGTTT 59.234 47.619 0.00 0.00 34.02 2.66
2722 3054 1.344763 CTTCGAACTTGGGTGGAGAGT 59.655 52.381 0.00 0.00 0.00 3.24
2732 3064 2.821991 AGTCAGTCCCTTCGAACTTG 57.178 50.000 0.00 0.00 0.00 3.16
2810 3195 6.548622 CACACATATCCAATCCCAAGATCTTT 59.451 38.462 4.86 0.00 0.00 2.52
2915 3300 7.040494 GGTACTTTACTTACTCCCTTGATGTC 58.960 42.308 0.00 0.00 0.00 3.06
2916 3301 6.499350 TGGTACTTTACTTACTCCCTTGATGT 59.501 38.462 0.00 0.00 0.00 3.06
2917 3302 6.942976 TGGTACTTTACTTACTCCCTTGATG 58.057 40.000 0.00 0.00 0.00 3.07
2920 3305 6.594159 CACATGGTACTTTACTTACTCCCTTG 59.406 42.308 0.00 0.00 0.00 3.61
2936 3321 3.380637 AGATCGTACAGGACACATGGTAC 59.619 47.826 0.00 0.00 34.29 3.34
2983 3395 1.167155 GCATCTCAGCTGCAGATGGG 61.167 60.000 33.31 28.19 45.18 4.00
2984 3396 0.179043 AGCATCTCAGCTGCAGATGG 60.179 55.000 33.31 20.62 45.18 3.51
3097 3513 4.380233 GCTGTTCCTCCAAGAATGTGAATG 60.380 45.833 0.00 0.00 0.00 2.67
3378 3800 8.704234 GCCAGATATCTCTAGTTTTGTATTTCG 58.296 37.037 1.03 0.00 0.00 3.46
3395 3817 5.593968 TGCATCAAAACATTGCCAGATATC 58.406 37.500 0.00 0.00 35.51 1.63
3402 3824 4.816786 AACTTTGCATCAAAACATTGCC 57.183 36.364 0.00 0.00 35.51 4.52
3404 3826 7.242079 TCAACAAACTTTGCATCAAAACATTG 58.758 30.769 1.14 8.50 32.75 2.82
3463 3888 6.781138 TCCGAGCAAATCATGTACAAAATAC 58.219 36.000 0.00 0.00 0.00 1.89
3469 3894 3.885724 TCTCCGAGCAAATCATGTACA 57.114 42.857 0.00 0.00 0.00 2.90
3470 3895 5.741388 ATTTCTCCGAGCAAATCATGTAC 57.259 39.130 0.00 0.00 0.00 2.90
3471 3896 6.816136 TCTATTTCTCCGAGCAAATCATGTA 58.184 36.000 8.29 0.00 0.00 2.29
3473 3898 6.609237 TTCTATTTCTCCGAGCAAATCATG 57.391 37.500 8.29 0.00 0.00 3.07
3559 4134 2.297315 CAGTCCACTTCAGCACTGTAGA 59.703 50.000 10.78 0.00 33.03 2.59
4343 5264 8.834465 CATTACTTCTGTTAGCTTCTGCAATAT 58.166 33.333 0.00 0.00 42.74 1.28
4547 5468 6.323739 CCATGGTGTTTAGGCTGGTATTATTT 59.676 38.462 2.57 0.00 0.00 1.40
4751 5727 8.597662 ATTCATTTACTGATATGGCATTTTGC 57.402 30.769 4.78 0.00 36.77 3.68
5070 6049 4.482952 AAGGACCCTTTCTATTGGTACG 57.517 45.455 0.00 0.00 38.09 3.67
5073 6052 5.853572 TTGTAAGGACCCTTTCTATTGGT 57.146 39.130 6.62 0.00 37.47 3.67
5223 6216 6.069905 TGTTGCTGTATTGTTATTCCCTCCTA 60.070 38.462 0.00 0.00 0.00 2.94
5229 6222 5.447279 CCGAGTGTTGCTGTATTGTTATTCC 60.447 44.000 0.00 0.00 0.00 3.01
5231 6224 5.001232 ACCGAGTGTTGCTGTATTGTTATT 58.999 37.500 0.00 0.00 0.00 1.40
5236 6229 4.451096 ACTTTACCGAGTGTTGCTGTATTG 59.549 41.667 0.00 0.00 0.00 1.90
5243 6236 3.805971 ACAAGTACTTTACCGAGTGTTGC 59.194 43.478 5.07 0.00 32.43 4.17
5372 6571 4.864247 AGAATTCACTGTTGTGTTGTTTGC 59.136 37.500 8.44 0.00 44.14 3.68
5522 6724 4.319333 GCACAGTGAGCATGAATATGTAGC 60.319 45.833 4.15 0.00 36.65 3.58
5657 6878 1.094785 CACCTGGCCTAAATGAACCG 58.905 55.000 3.32 0.00 0.00 4.44
5994 7215 9.377238 ACTTATATTTAGAAACGGAGGGAGTAT 57.623 33.333 0.00 0.00 0.00 2.12
5995 7216 8.773033 ACTTATATTTAGAAACGGAGGGAGTA 57.227 34.615 0.00 0.00 0.00 2.59
5996 7217 7.564292 AGACTTATATTTAGAAACGGAGGGAGT 59.436 37.037 0.00 0.00 0.00 3.85
5997 7218 7.953752 AGACTTATATTTAGAAACGGAGGGAG 58.046 38.462 0.00 0.00 0.00 4.30
5998 7219 7.909485 AGACTTATATTTAGAAACGGAGGGA 57.091 36.000 0.00 0.00 0.00 4.20
5999 7220 8.959705 AAAGACTTATATTTAGAAACGGAGGG 57.040 34.615 0.00 0.00 0.00 4.30
6018 7239 9.713713 GTCCTTACTGAAATCTCTAAAAAGACT 57.286 33.333 0.00 0.00 0.00 3.24
6019 7240 9.713713 AGTCCTTACTGAAATCTCTAAAAAGAC 57.286 33.333 0.00 0.00 33.57 3.01
6026 7247 9.916360 TGTATGTAGTCCTTACTGAAATCTCTA 57.084 33.333 0.00 0.00 36.36 2.43
6027 7248 8.824756 TGTATGTAGTCCTTACTGAAATCTCT 57.175 34.615 0.00 0.00 36.36 3.10
6028 7249 8.904834 TCTGTATGTAGTCCTTACTGAAATCTC 58.095 37.037 0.00 0.00 36.36 2.75
6029 7250 8.824756 TCTGTATGTAGTCCTTACTGAAATCT 57.175 34.615 0.00 0.00 36.36 2.40
6076 7297 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
6077 7298 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
6078 7299 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
6079 7300 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
6080 7301 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
6081 7302 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
6082 7303 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
6083 7304 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
6084 7305 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
6085 7306 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
6086 7307 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
6087 7308 4.508124 GGACTACATACGGAGCAAAATGAG 59.492 45.833 0.00 0.00 0.00 2.90
6088 7309 4.439057 GGACTACATACGGAGCAAAATGA 58.561 43.478 0.00 0.00 0.00 2.57
6089 7310 3.245284 CGGACTACATACGGAGCAAAATG 59.755 47.826 0.00 0.00 0.00 2.32
6090 7311 3.454375 CGGACTACATACGGAGCAAAAT 58.546 45.455 0.00 0.00 0.00 1.82
6091 7312 2.883574 CGGACTACATACGGAGCAAAA 58.116 47.619 0.00 0.00 0.00 2.44
6092 7313 1.470285 GCGGACTACATACGGAGCAAA 60.470 52.381 0.00 0.00 0.00 3.68
6093 7314 0.101759 GCGGACTACATACGGAGCAA 59.898 55.000 0.00 0.00 0.00 3.91
6094 7315 1.033202 TGCGGACTACATACGGAGCA 61.033 55.000 0.00 0.00 0.00 4.26
6095 7316 0.314302 ATGCGGACTACATACGGAGC 59.686 55.000 0.00 0.00 0.00 4.70
6096 7317 2.795175 AATGCGGACTACATACGGAG 57.205 50.000 0.00 0.00 0.00 4.63
6097 7318 3.479489 TCTAATGCGGACTACATACGGA 58.521 45.455 0.00 0.00 0.00 4.69
6098 7319 3.909776 TCTAATGCGGACTACATACGG 57.090 47.619 0.00 0.00 0.00 4.02
6099 7320 5.700846 AGATTCTAATGCGGACTACATACG 58.299 41.667 0.00 0.00 0.00 3.06
6100 7321 6.915349 AGAGATTCTAATGCGGACTACATAC 58.085 40.000 0.00 0.00 0.00 2.39
6101 7322 8.631480 TTAGAGATTCTAATGCGGACTACATA 57.369 34.615 0.00 0.00 34.30 2.29
6102 7323 7.526142 TTAGAGATTCTAATGCGGACTACAT 57.474 36.000 0.00 0.00 34.30 2.29
6103 7324 6.954487 TTAGAGATTCTAATGCGGACTACA 57.046 37.500 0.00 0.00 34.30 2.74
6104 7325 8.644318 TTTTTAGAGATTCTAATGCGGACTAC 57.356 34.615 0.00 0.00 38.60 2.73
6105 7326 8.692710 TCTTTTTAGAGATTCTAATGCGGACTA 58.307 33.333 0.00 0.00 38.60 2.59
6106 7327 7.492994 GTCTTTTTAGAGATTCTAATGCGGACT 59.507 37.037 0.00 0.00 38.60 3.85
6107 7328 7.492994 AGTCTTTTTAGAGATTCTAATGCGGAC 59.507 37.037 0.00 6.54 38.60 4.79
6108 7329 7.556844 AGTCTTTTTAGAGATTCTAATGCGGA 58.443 34.615 0.00 0.00 38.60 5.54
6109 7330 7.778470 AGTCTTTTTAGAGATTCTAATGCGG 57.222 36.000 0.00 0.00 38.60 5.69
6110 7331 7.637907 GCAAGTCTTTTTAGAGATTCTAATGCG 59.362 37.037 0.00 0.00 38.60 4.73
6111 7332 8.454106 TGCAAGTCTTTTTAGAGATTCTAATGC 58.546 33.333 9.62 9.62 38.60 3.56
6117 7338 9.780413 CCTAAATGCAAGTCTTTTTAGAGATTC 57.220 33.333 14.10 0.00 0.00 2.52
6118 7339 9.520515 TCCTAAATGCAAGTCTTTTTAGAGATT 57.479 29.630 14.10 0.00 0.00 2.40
6119 7340 9.520515 TTCCTAAATGCAAGTCTTTTTAGAGAT 57.479 29.630 14.10 0.00 0.00 2.75
6120 7341 8.784043 GTTCCTAAATGCAAGTCTTTTTAGAGA 58.216 33.333 14.10 8.58 0.00 3.10
6121 7342 7.746475 CGTTCCTAAATGCAAGTCTTTTTAGAG 59.254 37.037 14.10 6.94 0.00 2.43
6122 7343 7.308348 CCGTTCCTAAATGCAAGTCTTTTTAGA 60.308 37.037 14.10 1.97 0.00 2.10
6123 7344 6.801862 CCGTTCCTAAATGCAAGTCTTTTTAG 59.198 38.462 7.85 7.85 0.00 1.85
6124 7345 6.487331 TCCGTTCCTAAATGCAAGTCTTTTTA 59.513 34.615 0.00 0.00 0.00 1.52
6125 7346 5.300792 TCCGTTCCTAAATGCAAGTCTTTTT 59.699 36.000 0.00 0.00 0.00 1.94
6126 7347 4.825085 TCCGTTCCTAAATGCAAGTCTTTT 59.175 37.500 0.00 0.00 0.00 2.27
6127 7348 4.394729 TCCGTTCCTAAATGCAAGTCTTT 58.605 39.130 0.00 0.00 0.00 2.52
6128 7349 4.003648 CTCCGTTCCTAAATGCAAGTCTT 58.996 43.478 0.00 0.00 0.00 3.01
6129 7350 3.260884 TCTCCGTTCCTAAATGCAAGTCT 59.739 43.478 0.00 0.00 0.00 3.24
6130 7351 3.596214 TCTCCGTTCCTAAATGCAAGTC 58.404 45.455 0.00 0.00 0.00 3.01
6131 7352 3.260884 TCTCTCCGTTCCTAAATGCAAGT 59.739 43.478 0.00 0.00 0.00 3.16
6132 7353 3.861840 TCTCTCCGTTCCTAAATGCAAG 58.138 45.455 0.00 0.00 0.00 4.01
6133 7354 3.973206 TCTCTCCGTTCCTAAATGCAA 57.027 42.857 0.00 0.00 0.00 4.08
6134 7355 5.304357 TGATATCTCTCCGTTCCTAAATGCA 59.696 40.000 3.98 0.00 0.00 3.96
6135 7356 5.784177 TGATATCTCTCCGTTCCTAAATGC 58.216 41.667 3.98 0.00 0.00 3.56
6136 7357 8.961634 TCTATGATATCTCTCCGTTCCTAAATG 58.038 37.037 3.98 0.00 0.00 2.32
6137 7358 9.535170 TTCTATGATATCTCTCCGTTCCTAAAT 57.465 33.333 3.98 0.00 0.00 1.40
6138 7359 8.935614 TTCTATGATATCTCTCCGTTCCTAAA 57.064 34.615 3.98 0.00 0.00 1.85
6139 7360 8.383947 TCTTCTATGATATCTCTCCGTTCCTAA 58.616 37.037 3.98 0.00 0.00 2.69
6140 7361 7.919151 TCTTCTATGATATCTCTCCGTTCCTA 58.081 38.462 3.98 0.00 0.00 2.94
6141 7362 6.785076 TCTTCTATGATATCTCTCCGTTCCT 58.215 40.000 3.98 0.00 0.00 3.36
6142 7363 7.040340 TGTTCTTCTATGATATCTCTCCGTTCC 60.040 40.741 3.98 0.00 0.00 3.62
6143 7364 7.877003 TGTTCTTCTATGATATCTCTCCGTTC 58.123 38.462 3.98 0.00 0.00 3.95
6144 7365 7.825331 TGTTCTTCTATGATATCTCTCCGTT 57.175 36.000 3.98 0.00 0.00 4.44
6145 7366 7.667635 TCATGTTCTTCTATGATATCTCTCCGT 59.332 37.037 3.98 0.00 0.00 4.69
6146 7367 8.049655 TCATGTTCTTCTATGATATCTCTCCG 57.950 38.462 3.98 0.00 0.00 4.63
6147 7368 9.806203 CATCATGTTCTTCTATGATATCTCTCC 57.194 37.037 3.98 0.00 40.93 3.71
6279 7705 0.742281 CCACAAGCTCCATGACCTCG 60.742 60.000 0.00 0.00 0.00 4.63
6315 7741 3.947834 CAGGTAGTCCAACCAATGAATCC 59.052 47.826 0.00 0.00 42.40 3.01
6579 8005 9.793259 TCCTTTTCTTCTCAAAATACATGTACT 57.207 29.630 7.96 0.00 0.00 2.73
6992 8449 4.862641 ATAATGCCACCAAGAACCTACT 57.137 40.909 0.00 0.00 0.00 2.57
7000 8457 4.889409 AGTATGGACAATAATGCCACCAAG 59.111 41.667 0.00 0.00 36.17 3.61
7001 8458 4.865905 AGTATGGACAATAATGCCACCAA 58.134 39.130 0.00 0.00 36.17 3.67
7129 8805 5.828328 GGGTGTGCTTAGCTCCTTTATTATT 59.172 40.000 5.60 0.00 0.00 1.40
7130 8806 5.377478 GGGTGTGCTTAGCTCCTTTATTAT 58.623 41.667 5.60 0.00 0.00 1.28
7157 8833 6.437477 GGAAAGGATAGGTCATTTGAACCTTT 59.563 38.462 0.00 0.00 45.20 3.11
7186 8862 3.318275 TGAGAAAGTTCTGCGAGTACTGT 59.682 43.478 0.00 0.00 37.73 3.55
7200 8876 3.627577 AGCGAAACATTGTGTGAGAAAGT 59.372 39.130 0.00 0.00 0.00 2.66
7204 8880 2.286950 GCAAGCGAAACATTGTGTGAGA 60.287 45.455 0.00 0.00 0.00 3.27
7279 8955 5.595542 TGCCATTACTACGGTGTAGAAGTAT 59.404 40.000 10.73 0.00 0.00 2.12
7392 9099 4.399934 GTGAAATAGCCCCGGTTAATTTCA 59.600 41.667 19.37 19.37 35.16 2.69
7407 9114 3.603532 TCTGCCTGCAAGAGTGAAATAG 58.396 45.455 0.00 0.00 34.07 1.73
7586 9293 2.444010 AGTAAACTGTACCTGCCCCAAA 59.556 45.455 0.00 0.00 0.00 3.28
7661 9399 6.643388 TGCTTGCATCTGATTTCTAGTCTTA 58.357 36.000 0.00 0.00 0.00 2.10
7745 9540 7.931578 TGTTCTTTTGTTTCTCTCCACTTAA 57.068 32.000 0.00 0.00 0.00 1.85
7776 9578 0.701731 TGGGAACACATGTTAGGGGG 59.298 55.000 0.00 0.00 38.56 5.40
8135 10072 7.279090 GGGATTCTCTGTAGAAAGAGTTAAAGC 59.721 40.741 1.44 0.00 44.75 3.51
8287 10226 3.939592 GTGATGGTAACCAAAGTAGCTCC 59.060 47.826 0.00 0.00 36.95 4.70
8381 10321 5.357742 TCTGCCAGTTGAATAGCTTGATA 57.642 39.130 0.00 0.00 0.00 2.15
8446 10390 9.613957 CTATACAACTACAATGACCTCTTATCG 57.386 37.037 0.00 0.00 0.00 2.92
8450 10394 9.476928 AGTACTATACAACTACAATGACCTCTT 57.523 33.333 0.00 0.00 0.00 2.85
8544 10520 5.666462 TGCTGCGTTTCTAGGAATTGTATA 58.334 37.500 0.00 0.00 0.00 1.47
8545 10521 4.513442 TGCTGCGTTTCTAGGAATTGTAT 58.487 39.130 0.00 0.00 0.00 2.29
8546 10522 3.932710 CTGCTGCGTTTCTAGGAATTGTA 59.067 43.478 0.00 0.00 0.00 2.41
8565 10541 3.427161 AGTTGAAACTGAACTTGCTGC 57.573 42.857 0.00 0.00 37.98 5.25
8581 10558 6.173339 TCCTAGCTTCTTGACCAAATAGTTG 58.827 40.000 0.00 0.00 34.25 3.16
8706 10723 4.939439 GCTGCAAATCAAATTCTCCCATTT 59.061 37.500 0.00 0.00 0.00 2.32
8709 10726 2.898612 TGCTGCAAATCAAATTCTCCCA 59.101 40.909 0.00 0.00 0.00 4.37
8849 10890 1.231928 GGAGGGAGGGAGAGAGGTC 59.768 68.421 0.00 0.00 0.00 3.85
8903 10944 3.866582 GGATCGACCCAGGCCAGG 61.867 72.222 7.34 7.34 0.00 4.45
8939 10980 1.668151 GCATCTATCCCGAACCGCC 60.668 63.158 0.00 0.00 0.00 6.13
8943 10984 0.667792 GCTCCGCATCTATCCCGAAC 60.668 60.000 0.00 0.00 0.00 3.95
9101 11142 2.286523 CCCACCGAGAAGCAGGAGT 61.287 63.158 0.00 0.00 0.00 3.85
9172 11221 1.159713 CGATTGCGCTGCCCATTCTA 61.160 55.000 9.73 0.00 0.00 2.10
9189 11238 1.273606 CTGAACTTCTGAAGGAGCCGA 59.726 52.381 20.61 0.00 0.00 5.54
9196 11245 5.739161 CCAACGTTTTTCTGAACTTCTGAAG 59.261 40.000 15.59 15.59 36.07 3.02
9230 11280 5.277154 GCTTGCGTCTGTACTCTGTTAAAAA 60.277 40.000 0.00 0.00 0.00 1.94
9231 11281 4.210537 GCTTGCGTCTGTACTCTGTTAAAA 59.789 41.667 0.00 0.00 0.00 1.52
9232 11282 3.739300 GCTTGCGTCTGTACTCTGTTAAA 59.261 43.478 0.00 0.00 0.00 1.52
9233 11283 3.243602 TGCTTGCGTCTGTACTCTGTTAA 60.244 43.478 0.00 0.00 0.00 2.01
9234 11284 2.295070 TGCTTGCGTCTGTACTCTGTTA 59.705 45.455 0.00 0.00 0.00 2.41
9235 11285 1.068588 TGCTTGCGTCTGTACTCTGTT 59.931 47.619 0.00 0.00 0.00 3.16
9236 11286 0.673985 TGCTTGCGTCTGTACTCTGT 59.326 50.000 0.00 0.00 0.00 3.41
9237 11287 1.063806 GTGCTTGCGTCTGTACTCTG 58.936 55.000 0.00 0.00 0.00 3.35
9238 11288 0.962489 AGTGCTTGCGTCTGTACTCT 59.038 50.000 0.00 0.00 0.00 3.24
9239 11289 1.335964 TGAGTGCTTGCGTCTGTACTC 60.336 52.381 12.13 12.13 43.12 2.59
9240 11290 0.673985 TGAGTGCTTGCGTCTGTACT 59.326 50.000 0.00 0.00 32.11 2.73
9241 11291 1.714794 ATGAGTGCTTGCGTCTGTAC 58.285 50.000 0.00 0.00 0.00 2.90
9242 11292 3.801114 ATATGAGTGCTTGCGTCTGTA 57.199 42.857 0.00 0.00 0.00 2.74
9243 11293 2.680312 ATATGAGTGCTTGCGTCTGT 57.320 45.000 0.00 0.00 0.00 3.41
9244 11294 3.447742 TGTATATGAGTGCTTGCGTCTG 58.552 45.455 0.00 0.00 0.00 3.51
9245 11295 3.801114 TGTATATGAGTGCTTGCGTCT 57.199 42.857 0.00 0.00 0.00 4.18
9246 11296 3.363378 GCATGTATATGAGTGCTTGCGTC 60.363 47.826 3.28 0.00 36.36 5.19
9247 11297 2.545526 GCATGTATATGAGTGCTTGCGT 59.454 45.455 3.28 0.00 36.36 5.24
9248 11298 2.410646 CGCATGTATATGAGTGCTTGCG 60.411 50.000 3.28 9.80 45.76 4.85
9249 11299 2.663879 GCGCATGTATATGAGTGCTTGC 60.664 50.000 0.30 0.00 36.59 4.01
9250 11300 2.545106 TGCGCATGTATATGAGTGCTTG 59.455 45.455 5.66 0.00 36.59 4.01
9251 11301 2.837498 TGCGCATGTATATGAGTGCTT 58.163 42.857 5.66 0.00 36.59 3.91
9252 11302 2.531522 TGCGCATGTATATGAGTGCT 57.468 45.000 5.66 0.00 36.59 4.40
9253 11303 3.679502 TGTATGCGCATGTATATGAGTGC 59.320 43.478 32.48 7.31 36.59 4.40
9254 11304 4.925646 AGTGTATGCGCATGTATATGAGTG 59.074 41.667 32.48 0.00 36.59 3.51
9255 11305 5.139435 AGTGTATGCGCATGTATATGAGT 57.861 39.130 32.48 5.52 36.59 3.41
9256 11306 6.035005 GGTAAGTGTATGCGCATGTATATGAG 59.965 42.308 32.48 0.87 36.36 2.90
9257 11307 5.867174 GGTAAGTGTATGCGCATGTATATGA 59.133 40.000 32.48 8.02 36.36 2.15
9258 11308 5.063438 GGGTAAGTGTATGCGCATGTATATG 59.937 44.000 32.48 0.00 37.36 1.78
9259 11309 5.175859 GGGTAAGTGTATGCGCATGTATAT 58.824 41.667 32.48 17.40 0.00 0.86
9260 11310 4.561938 GGGGTAAGTGTATGCGCATGTATA 60.562 45.833 32.48 10.12 0.00 1.47
9261 11311 3.399330 GGGTAAGTGTATGCGCATGTAT 58.601 45.455 32.48 15.69 0.00 2.29
9262 11312 2.484065 GGGGTAAGTGTATGCGCATGTA 60.484 50.000 32.48 17.97 0.00 2.29
9263 11313 1.663695 GGGTAAGTGTATGCGCATGT 58.336 50.000 32.48 11.40 0.00 3.21
9264 11314 0.944386 GGGGTAAGTGTATGCGCATG 59.056 55.000 32.48 0.00 0.00 4.06
9265 11315 0.837272 AGGGGTAAGTGTATGCGCAT 59.163 50.000 28.23 28.23 0.00 4.73
9266 11316 0.107897 CAGGGGTAAGTGTATGCGCA 60.108 55.000 14.96 14.96 0.00 6.09
9267 11317 0.107848 ACAGGGGTAAGTGTATGCGC 60.108 55.000 0.00 0.00 0.00 6.09
9268 11318 1.206132 TCACAGGGGTAAGTGTATGCG 59.794 52.381 0.00 0.00 0.00 4.73
9269 11319 3.007635 GTTCACAGGGGTAAGTGTATGC 58.992 50.000 0.00 0.00 0.00 3.14
9270 11320 4.280436 TGTTCACAGGGGTAAGTGTATG 57.720 45.455 0.00 0.00 0.00 2.39
9271 11321 6.824958 ATATGTTCACAGGGGTAAGTGTAT 57.175 37.500 0.00 0.00 0.00 2.29
9272 11322 6.668718 TGTATATGTTCACAGGGGTAAGTGTA 59.331 38.462 0.00 0.00 0.00 2.90
9273 11323 5.486063 TGTATATGTTCACAGGGGTAAGTGT 59.514 40.000 0.00 0.00 0.00 3.55
9274 11324 5.984725 TGTATATGTTCACAGGGGTAAGTG 58.015 41.667 0.00 0.00 0.00 3.16
9275 11325 5.396436 GCTGTATATGTTCACAGGGGTAAGT 60.396 44.000 5.69 0.00 42.00 2.24
9276 11326 5.057149 GCTGTATATGTTCACAGGGGTAAG 58.943 45.833 5.69 0.00 42.00 2.34
9277 11327 4.471747 TGCTGTATATGTTCACAGGGGTAA 59.528 41.667 5.69 0.00 42.00 2.85
9278 11328 4.034410 TGCTGTATATGTTCACAGGGGTA 58.966 43.478 5.69 0.00 42.00 3.69
9279 11329 2.843730 TGCTGTATATGTTCACAGGGGT 59.156 45.455 5.69 0.00 42.00 4.95
9280 11330 3.206150 GTGCTGTATATGTTCACAGGGG 58.794 50.000 5.69 0.00 42.00 4.79
9281 11331 3.623060 GTGTGCTGTATATGTTCACAGGG 59.377 47.826 5.69 0.00 42.00 4.45
9282 11332 3.623060 GGTGTGCTGTATATGTTCACAGG 59.377 47.826 5.69 0.00 42.00 4.00
9283 11333 3.623060 GGGTGTGCTGTATATGTTCACAG 59.377 47.826 0.00 0.00 44.07 3.66
9284 11334 3.263170 AGGGTGTGCTGTATATGTTCACA 59.737 43.478 0.00 0.00 35.57 3.58
9285 11335 3.873910 AGGGTGTGCTGTATATGTTCAC 58.126 45.455 0.00 0.00 0.00 3.18
9286 11336 5.221641 GGATAGGGTGTGCTGTATATGTTCA 60.222 44.000 0.00 0.00 0.00 3.18
9287 11337 5.012148 AGGATAGGGTGTGCTGTATATGTTC 59.988 44.000 0.00 0.00 0.00 3.18
9288 11338 4.907875 AGGATAGGGTGTGCTGTATATGTT 59.092 41.667 0.00 0.00 0.00 2.71
9289 11339 4.493618 AGGATAGGGTGTGCTGTATATGT 58.506 43.478 0.00 0.00 0.00 2.29
9290 11340 5.489792 AAGGATAGGGTGTGCTGTATATG 57.510 43.478 0.00 0.00 0.00 1.78
9291 11341 6.959954 TCATAAGGATAGGGTGTGCTGTATAT 59.040 38.462 0.00 0.00 0.00 0.86
9292 11342 6.319715 TCATAAGGATAGGGTGTGCTGTATA 58.680 40.000 0.00 0.00 0.00 1.47
9293 11343 5.155161 TCATAAGGATAGGGTGTGCTGTAT 58.845 41.667 0.00 0.00 0.00 2.29
9294 11344 4.552674 TCATAAGGATAGGGTGTGCTGTA 58.447 43.478 0.00 0.00 0.00 2.74
9295 11345 3.384168 TCATAAGGATAGGGTGTGCTGT 58.616 45.455 0.00 0.00 0.00 4.40
9296 11346 3.805108 GCTCATAAGGATAGGGTGTGCTG 60.805 52.174 0.00 0.00 0.00 4.41
9297 11347 2.370189 GCTCATAAGGATAGGGTGTGCT 59.630 50.000 0.00 0.00 0.00 4.40
9298 11348 2.104792 TGCTCATAAGGATAGGGTGTGC 59.895 50.000 0.00 0.00 0.00 4.57
9299 11349 3.495100 GGTGCTCATAAGGATAGGGTGTG 60.495 52.174 0.00 0.00 0.00 3.82
9300 11350 2.706190 GGTGCTCATAAGGATAGGGTGT 59.294 50.000 0.00 0.00 0.00 4.16
9301 11351 2.975489 AGGTGCTCATAAGGATAGGGTG 59.025 50.000 0.00 0.00 0.00 4.61
9302 11352 3.116551 AGAGGTGCTCATAAGGATAGGGT 60.117 47.826 0.00 0.00 32.06 4.34
9303 11353 3.260380 CAGAGGTGCTCATAAGGATAGGG 59.740 52.174 0.00 0.00 32.06 3.53
9304 11354 4.155709 TCAGAGGTGCTCATAAGGATAGG 58.844 47.826 0.00 0.00 32.06 2.57
9305 11355 5.076182 TCTCAGAGGTGCTCATAAGGATAG 58.924 45.833 0.00 0.00 32.06 2.08
9306 11356 5.066913 TCTCAGAGGTGCTCATAAGGATA 57.933 43.478 0.00 0.00 32.06 2.59
9307 11357 3.896888 CTCTCAGAGGTGCTCATAAGGAT 59.103 47.826 0.00 0.00 32.06 3.24
9308 11358 3.295093 CTCTCAGAGGTGCTCATAAGGA 58.705 50.000 0.00 0.00 32.06 3.36
9309 11359 2.364970 CCTCTCAGAGGTGCTCATAAGG 59.635 54.545 13.31 0.00 44.25 2.69
9310 11360 3.731652 CCTCTCAGAGGTGCTCATAAG 57.268 52.381 13.31 0.00 44.25 1.73
9329 11379 1.002868 ATGATATGCCGGCTCAGCC 60.003 57.895 29.70 5.22 46.75 4.85
9330 11380 0.036577 AGATGATATGCCGGCTCAGC 60.037 55.000 29.70 24.79 0.00 4.26
9331 11381 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
9332 11382 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
9333 11383 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
9334 11384 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
9335 11385 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
9336 11386 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
9337 11387 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
9338 11388 6.312426 CCTCGTAAATCTCAAGATGATATGCC 59.688 42.308 0.00 0.00 34.49 4.40
9339 11389 6.870965 ACCTCGTAAATCTCAAGATGATATGC 59.129 38.462 0.00 0.00 34.49 3.14
9340 11390 7.543868 GGACCTCGTAAATCTCAAGATGATATG 59.456 40.741 0.00 0.00 34.49 1.78
9341 11391 7.453126 AGGACCTCGTAAATCTCAAGATGATAT 59.547 37.037 0.00 0.00 34.49 1.63
9342 11392 6.778069 AGGACCTCGTAAATCTCAAGATGATA 59.222 38.462 0.00 0.00 34.49 2.15
9343 11393 5.600484 AGGACCTCGTAAATCTCAAGATGAT 59.400 40.000 0.00 0.00 34.49 2.45
9344 11394 4.956700 AGGACCTCGTAAATCTCAAGATGA 59.043 41.667 0.00 0.00 34.49 2.92
9345 11395 5.269505 AGGACCTCGTAAATCTCAAGATG 57.730 43.478 0.00 0.00 34.49 2.90
9346 11396 5.523438 GAGGACCTCGTAAATCTCAAGAT 57.477 43.478 5.55 0.00 36.07 2.40
9347 11397 4.985538 GAGGACCTCGTAAATCTCAAGA 57.014 45.455 5.55 0.00 0.00 3.02
9369 11419 0.454600 TTCTGGATGTCGTCGCCTAC 59.545 55.000 0.00 0.00 0.00 3.18
9370 11420 1.179152 TTTCTGGATGTCGTCGCCTA 58.821 50.000 0.00 0.00 0.00 3.93
9371 11421 0.537188 ATTTCTGGATGTCGTCGCCT 59.463 50.000 0.00 0.00 0.00 5.52
9372 11422 2.218953 TATTTCTGGATGTCGTCGCC 57.781 50.000 0.00 0.00 0.00 5.54
9373 11423 3.604772 GCATTATTTCTGGATGTCGTCGC 60.605 47.826 0.00 0.00 0.00 5.19
9374 11424 3.362014 CGCATTATTTCTGGATGTCGTCG 60.362 47.826 0.00 0.00 0.00 5.12
9375 11425 3.802139 TCGCATTATTTCTGGATGTCGTC 59.198 43.478 0.00 0.00 0.00 4.20
9376 11426 3.792401 TCGCATTATTTCTGGATGTCGT 58.208 40.909 0.00 0.00 0.00 4.34
9377 11427 3.363378 GCTCGCATTATTTCTGGATGTCG 60.363 47.826 0.00 0.00 0.00 4.35
9378 11428 3.561310 TGCTCGCATTATTTCTGGATGTC 59.439 43.478 0.00 0.00 0.00 3.06
9379 11429 3.544684 TGCTCGCATTATTTCTGGATGT 58.455 40.909 0.00 0.00 0.00 3.06
9380 11430 4.668431 CGATGCTCGCATTATTTCTGGATG 60.668 45.833 5.79 0.00 36.70 3.51
9381 11431 3.434641 CGATGCTCGCATTATTTCTGGAT 59.565 43.478 5.79 0.00 36.70 3.41
9382 11432 2.802247 CGATGCTCGCATTATTTCTGGA 59.198 45.455 5.79 0.00 36.70 3.86
9383 11433 2.096069 CCGATGCTCGCATTATTTCTGG 60.096 50.000 5.79 0.00 38.82 3.86
9384 11434 2.096069 CCCGATGCTCGCATTATTTCTG 60.096 50.000 5.79 0.00 38.82 3.02
9385 11435 2.146342 CCCGATGCTCGCATTATTTCT 58.854 47.619 5.79 0.00 38.82 2.52
9386 11436 2.096218 GTCCCGATGCTCGCATTATTTC 60.096 50.000 5.79 0.00 38.82 2.17
9387 11437 1.873591 GTCCCGATGCTCGCATTATTT 59.126 47.619 5.79 0.00 38.82 1.40
9388 11438 1.070758 AGTCCCGATGCTCGCATTATT 59.929 47.619 5.79 0.00 38.82 1.40
9389 11439 0.681733 AGTCCCGATGCTCGCATTAT 59.318 50.000 5.79 0.00 38.82 1.28
9390 11440 0.464036 AAGTCCCGATGCTCGCATTA 59.536 50.000 5.79 0.00 38.82 1.90
9391 11441 1.091771 CAAGTCCCGATGCTCGCATT 61.092 55.000 5.79 0.00 38.82 3.56
9392 11442 1.522355 CAAGTCCCGATGCTCGCAT 60.522 57.895 3.70 3.70 38.82 4.73
9393 11443 2.125552 CAAGTCCCGATGCTCGCA 60.126 61.111 0.00 0.00 38.82 5.10
9394 11444 2.184322 TCAAGTCCCGATGCTCGC 59.816 61.111 0.72 0.00 38.82 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.