Multiple sequence alignment - TraesCS3D01G473100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G473100 chr3D 100.000 3626 0 0 1 3626 574857618 574853993 0.000000e+00 6697
1 TraesCS3D01G473100 chr6D 98.436 2814 43 1 814 3626 472510963 472513776 0.000000e+00 4951
2 TraesCS3D01G473100 chr6D 97.939 2814 52 2 814 3626 367564537 367561729 0.000000e+00 4870
3 TraesCS3D01G473100 chr6D 97.517 2819 62 6 814 3626 51499464 51502280 0.000000e+00 4811
4 TraesCS3D01G473100 chr5D 98.402 2816 43 2 812 3626 480824256 480821442 0.000000e+00 4950
5 TraesCS3D01G473100 chr5D 98.115 2811 46 2 817 3626 244414324 244411520 0.000000e+00 4891
6 TraesCS3D01G473100 chr5D 97.623 2819 59 6 814 3626 565815802 565818618 0.000000e+00 4828
7 TraesCS3D01G473100 chr5D 97.481 2819 63 6 814 3626 260689962 260687146 0.000000e+00 4806
8 TraesCS3D01G473100 chr5D 81.000 200 32 4 278 475 498473540 498473345 1.740000e-33 154
9 TraesCS3D01G473100 chr4D 98.085 2820 47 2 814 3626 398986367 398983548 0.000000e+00 4902
10 TraesCS3D01G473100 chr7D 97.694 2819 58 5 814 3626 245402431 245399614 0.000000e+00 4839
11 TraesCS3D01G473100 chr7D 86.607 224 26 4 252 475 593187440 593187659 1.010000e-60 244
12 TraesCS3D01G473100 chr7D 80.531 226 36 7 254 478 39776308 39776526 2.240000e-37 167
13 TraesCS3D01G473100 chr3A 86.154 325 31 6 489 813 710772583 710772893 4.480000e-89 339
14 TraesCS3D01G473100 chr3A 88.936 235 25 1 1 234 710772346 710772580 4.580000e-74 289
15 TraesCS3D01G473100 chr3B 88.235 272 32 0 489 760 765061124 765061395 3.490000e-85 326
16 TraesCS3D01G473100 chr3B 87.983 233 26 1 2 234 765060891 765061121 1.280000e-69 274
17 TraesCS3D01G473100 chrUn 80.753 239 33 10 238 475 17023064 17022838 1.340000e-39 174
18 TraesCS3D01G473100 chrUn 80.753 239 33 10 238 475 292133435 292133661 1.340000e-39 174
19 TraesCS3D01G473100 chrUn 80.753 239 33 10 238 475 302857050 302856824 1.340000e-39 174
20 TraesCS3D01G473100 chr2D 79.583 240 42 6 238 475 500147853 500148087 8.050000e-37 165
21 TraesCS3D01G473100 chr7A 78.879 232 37 10 247 477 546644740 546644520 2.920000e-31 147
22 TraesCS3D01G473100 chr5A 77.253 233 41 9 248 474 438418916 438419142 3.800000e-25 126


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G473100 chr3D 574853993 574857618 3625 True 6697 6697 100.000 1 3626 1 chr3D.!!$R1 3625
1 TraesCS3D01G473100 chr6D 472510963 472513776 2813 False 4951 4951 98.436 814 3626 1 chr6D.!!$F2 2812
2 TraesCS3D01G473100 chr6D 367561729 367564537 2808 True 4870 4870 97.939 814 3626 1 chr6D.!!$R1 2812
3 TraesCS3D01G473100 chr6D 51499464 51502280 2816 False 4811 4811 97.517 814 3626 1 chr6D.!!$F1 2812
4 TraesCS3D01G473100 chr5D 480821442 480824256 2814 True 4950 4950 98.402 812 3626 1 chr5D.!!$R3 2814
5 TraesCS3D01G473100 chr5D 244411520 244414324 2804 True 4891 4891 98.115 817 3626 1 chr5D.!!$R1 2809
6 TraesCS3D01G473100 chr5D 565815802 565818618 2816 False 4828 4828 97.623 814 3626 1 chr5D.!!$F1 2812
7 TraesCS3D01G473100 chr5D 260687146 260689962 2816 True 4806 4806 97.481 814 3626 1 chr5D.!!$R2 2812
8 TraesCS3D01G473100 chr4D 398983548 398986367 2819 True 4902 4902 98.085 814 3626 1 chr4D.!!$R1 2812
9 TraesCS3D01G473100 chr7D 245399614 245402431 2817 True 4839 4839 97.694 814 3626 1 chr7D.!!$R1 2812
10 TraesCS3D01G473100 chr3A 710772346 710772893 547 False 314 339 87.545 1 813 2 chr3A.!!$F1 812
11 TraesCS3D01G473100 chr3B 765060891 765061395 504 False 300 326 88.109 2 760 2 chr3B.!!$F1 758

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
523 525 0.036952 CTTGACACAGATGGCTCGGT 60.037 55.0 0.00 0.0 33.48 4.69 F
571 573 0.109597 GTGTGCGAAAAGGGAGCATG 60.110 55.0 0.00 0.0 43.17 4.06 F
2326 2356 0.043485 TGGTAGGGTAGGCCACATGA 59.957 55.0 5.01 0.0 36.17 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2295 2325 0.250467 CCCTACCATCCTGCCAATCG 60.250 60.000 0.00 0.0 0.00 3.34 R
2388 2418 1.276622 TCTGAACCTCCAACCTAGCC 58.723 55.000 0.00 0.0 0.00 3.93 R
3263 3295 1.209019 GATCTTCCCTGAGCTCTTGCA 59.791 52.381 16.19 0.0 42.74 4.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 57 2.276732 TTCCTTCTGAAACTGCTGGG 57.723 50.000 0.00 0.00 0.00 4.45
84 86 4.284178 TGTAGCCTTCTATCCCGTTAAGT 58.716 43.478 0.00 0.00 0.00 2.24
89 91 3.490419 CCTTCTATCCCGTTAAGTGTCCG 60.490 52.174 0.00 0.00 0.00 4.79
90 92 2.026641 TCTATCCCGTTAAGTGTCCGG 58.973 52.381 0.00 0.00 41.37 5.14
92 94 1.269012 ATCCCGTTAAGTGTCCGGAA 58.731 50.000 5.23 0.00 44.41 4.30
93 95 1.269012 TCCCGTTAAGTGTCCGGAAT 58.731 50.000 5.23 0.00 44.41 3.01
97 99 4.002316 CCCGTTAAGTGTCCGGAATTTAA 58.998 43.478 5.23 8.90 44.41 1.52
98 100 4.142838 CCCGTTAAGTGTCCGGAATTTAAC 60.143 45.833 23.62 23.62 44.41 2.01
99 101 4.692155 CCGTTAAGTGTCCGGAATTTAACT 59.308 41.667 26.97 16.58 44.41 2.24
100 102 5.163923 CCGTTAAGTGTCCGGAATTTAACTC 60.164 44.000 26.97 11.66 44.41 3.01
101 103 5.163923 CGTTAAGTGTCCGGAATTTAACTCC 60.164 44.000 26.97 13.64 33.98 3.85
102 104 4.360951 AAGTGTCCGGAATTTAACTCCA 57.639 40.909 5.23 0.00 32.77 3.86
103 105 4.569719 AGTGTCCGGAATTTAACTCCAT 57.430 40.909 5.23 0.00 32.77 3.41
104 106 4.918588 AGTGTCCGGAATTTAACTCCATT 58.081 39.130 5.23 0.00 32.77 3.16
105 107 5.321927 AGTGTCCGGAATTTAACTCCATTT 58.678 37.500 5.23 0.00 32.77 2.32
106 108 5.414765 AGTGTCCGGAATTTAACTCCATTTC 59.585 40.000 5.23 0.00 32.77 2.17
107 109 5.414765 GTGTCCGGAATTTAACTCCATTTCT 59.585 40.000 5.23 0.00 32.77 2.52
108 110 6.596497 GTGTCCGGAATTTAACTCCATTTCTA 59.404 38.462 5.23 0.00 32.77 2.10
109 111 6.821665 TGTCCGGAATTTAACTCCATTTCTAG 59.178 38.462 5.23 0.00 32.77 2.43
110 112 7.046033 GTCCGGAATTTAACTCCATTTCTAGA 58.954 38.462 5.23 0.00 32.77 2.43
111 113 7.224949 GTCCGGAATTTAACTCCATTTCTAGAG 59.775 40.741 5.23 0.00 36.16 2.43
112 114 7.125204 TCCGGAATTTAACTCCATTTCTAGAGA 59.875 37.037 0.00 0.00 34.13 3.10
113 115 7.439655 CCGGAATTTAACTCCATTTCTAGAGAG 59.560 40.741 0.00 5.42 34.13 3.20
114 116 8.198109 CGGAATTTAACTCCATTTCTAGAGAGA 58.802 37.037 12.36 0.00 34.13 3.10
115 117 9.892130 GGAATTTAACTCCATTTCTAGAGAGAA 57.108 33.333 12.36 0.00 35.04 2.87
127 129 5.763876 TCTAGAGAGAAAAAGGGGAAAGG 57.236 43.478 0.00 0.00 0.00 3.11
128 130 3.162147 AGAGAGAAAAAGGGGAAAGGC 57.838 47.619 0.00 0.00 0.00 4.35
129 131 1.813178 GAGAGAAAAAGGGGAAAGGCG 59.187 52.381 0.00 0.00 0.00 5.52
130 132 1.145119 AGAGAAAAAGGGGAAAGGCGT 59.855 47.619 0.00 0.00 0.00 5.68
131 133 2.374170 AGAGAAAAAGGGGAAAGGCGTA 59.626 45.455 0.00 0.00 0.00 4.42
132 134 3.151554 GAGAAAAAGGGGAAAGGCGTAA 58.848 45.455 0.00 0.00 0.00 3.18
133 135 3.154710 AGAAAAAGGGGAAAGGCGTAAG 58.845 45.455 0.00 0.00 43.44 2.34
134 136 1.919240 AAAAGGGGAAAGGCGTAAGG 58.081 50.000 0.00 0.00 38.28 2.69
135 137 0.775542 AAAGGGGAAAGGCGTAAGGT 59.224 50.000 0.00 0.00 38.28 3.50
136 138 1.660242 AAGGGGAAAGGCGTAAGGTA 58.340 50.000 0.00 0.00 38.28 3.08
137 139 1.201424 AGGGGAAAGGCGTAAGGTAG 58.799 55.000 0.00 0.00 38.28 3.18
138 140 0.907486 GGGGAAAGGCGTAAGGTAGT 59.093 55.000 0.00 0.00 38.28 2.73
139 141 1.280133 GGGGAAAGGCGTAAGGTAGTT 59.720 52.381 0.00 0.00 38.28 2.24
140 142 2.353323 GGGAAAGGCGTAAGGTAGTTG 58.647 52.381 0.00 0.00 38.28 3.16
141 143 2.027837 GGGAAAGGCGTAAGGTAGTTGA 60.028 50.000 0.00 0.00 38.28 3.18
142 144 3.557686 GGGAAAGGCGTAAGGTAGTTGAA 60.558 47.826 0.00 0.00 38.28 2.69
143 145 4.259356 GGAAAGGCGTAAGGTAGTTGAAT 58.741 43.478 0.00 0.00 38.28 2.57
144 146 4.094442 GGAAAGGCGTAAGGTAGTTGAATG 59.906 45.833 0.00 0.00 38.28 2.67
145 147 2.629051 AGGCGTAAGGTAGTTGAATGC 58.371 47.619 0.00 0.00 38.28 3.56
146 148 2.027561 AGGCGTAAGGTAGTTGAATGCA 60.028 45.455 0.00 0.00 38.28 3.96
147 149 2.095372 GGCGTAAGGTAGTTGAATGCAC 59.905 50.000 0.00 0.00 38.28 4.57
148 150 3.000727 GCGTAAGGTAGTTGAATGCACT 58.999 45.455 0.00 0.00 38.28 4.40
149 151 3.181520 GCGTAAGGTAGTTGAATGCACTG 60.182 47.826 0.00 0.00 38.28 3.66
150 152 3.994392 CGTAAGGTAGTTGAATGCACTGT 59.006 43.478 0.00 0.00 0.00 3.55
151 153 5.165676 CGTAAGGTAGTTGAATGCACTGTA 58.834 41.667 0.00 0.00 0.00 2.74
152 154 5.636121 CGTAAGGTAGTTGAATGCACTGTAA 59.364 40.000 0.00 0.00 0.00 2.41
153 155 6.312918 CGTAAGGTAGTTGAATGCACTGTAAT 59.687 38.462 0.00 0.00 0.00 1.89
154 156 6.743575 AAGGTAGTTGAATGCACTGTAATC 57.256 37.500 0.00 0.00 0.00 1.75
155 157 5.804639 AGGTAGTTGAATGCACTGTAATCA 58.195 37.500 0.00 0.00 0.00 2.57
156 158 5.877012 AGGTAGTTGAATGCACTGTAATCAG 59.123 40.000 0.00 0.00 46.18 2.90
172 174 8.683550 CTGTAATCAGTGTGACTTCGTAATAA 57.316 34.615 0.00 0.00 36.97 1.40
173 175 9.302345 CTGTAATCAGTGTGACTTCGTAATAAT 57.698 33.333 0.00 0.00 36.97 1.28
174 176 9.083080 TGTAATCAGTGTGACTTCGTAATAATG 57.917 33.333 0.00 0.00 0.00 1.90
175 177 9.297586 GTAATCAGTGTGACTTCGTAATAATGA 57.702 33.333 0.00 0.00 0.00 2.57
176 178 8.771920 AATCAGTGTGACTTCGTAATAATGAA 57.228 30.769 0.00 0.00 0.00 2.57
177 179 8.948631 ATCAGTGTGACTTCGTAATAATGAAT 57.051 30.769 0.00 0.00 30.29 2.57
178 180 8.407457 TCAGTGTGACTTCGTAATAATGAATC 57.593 34.615 0.00 0.00 30.29 2.52
179 181 8.251026 TCAGTGTGACTTCGTAATAATGAATCT 58.749 33.333 0.00 0.00 30.29 2.40
180 182 8.873830 CAGTGTGACTTCGTAATAATGAATCTT 58.126 33.333 0.00 0.00 30.29 2.40
181 183 9.436957 AGTGTGACTTCGTAATAATGAATCTTT 57.563 29.630 0.00 0.00 30.29 2.52
182 184 9.690434 GTGTGACTTCGTAATAATGAATCTTTC 57.310 33.333 0.00 0.00 30.29 2.62
183 185 9.653287 TGTGACTTCGTAATAATGAATCTTTCT 57.347 29.630 0.00 0.00 30.29 2.52
187 189 8.821894 ACTTCGTAATAATGAATCTTTCTCTGC 58.178 33.333 0.00 0.00 30.29 4.26
188 190 8.716646 TTCGTAATAATGAATCTTTCTCTGCA 57.283 30.769 0.00 0.00 0.00 4.41
189 191 8.131455 TCGTAATAATGAATCTTTCTCTGCAC 57.869 34.615 0.00 0.00 0.00 4.57
190 192 7.224753 TCGTAATAATGAATCTTTCTCTGCACC 59.775 37.037 0.00 0.00 0.00 5.01
191 193 7.225538 CGTAATAATGAATCTTTCTCTGCACCT 59.774 37.037 0.00 0.00 0.00 4.00
192 194 7.951347 AATAATGAATCTTTCTCTGCACCTT 57.049 32.000 0.00 0.00 0.00 3.50
193 195 7.951347 ATAATGAATCTTTCTCTGCACCTTT 57.049 32.000 0.00 0.00 0.00 3.11
194 196 9.466497 AATAATGAATCTTTCTCTGCACCTTTA 57.534 29.630 0.00 0.00 0.00 1.85
195 197 6.998968 ATGAATCTTTCTCTGCACCTTTAG 57.001 37.500 0.00 0.00 0.00 1.85
196 198 5.869579 TGAATCTTTCTCTGCACCTTTAGT 58.130 37.500 0.00 0.00 0.00 2.24
218 220 4.552166 GCATATGCAGTGTTATCGGTTT 57.448 40.909 22.84 0.00 41.59 3.27
219 221 4.282068 GCATATGCAGTGTTATCGGTTTG 58.718 43.478 22.84 0.00 41.59 2.93
220 222 4.789481 GCATATGCAGTGTTATCGGTTTGG 60.789 45.833 22.84 0.00 41.59 3.28
221 223 0.878416 TGCAGTGTTATCGGTTTGGC 59.122 50.000 0.00 0.00 0.00 4.52
222 224 0.878416 GCAGTGTTATCGGTTTGGCA 59.122 50.000 0.00 0.00 0.00 4.92
223 225 1.472480 GCAGTGTTATCGGTTTGGCAT 59.528 47.619 0.00 0.00 0.00 4.40
224 226 2.680841 GCAGTGTTATCGGTTTGGCATA 59.319 45.455 0.00 0.00 0.00 3.14
225 227 3.315191 GCAGTGTTATCGGTTTGGCATAT 59.685 43.478 0.00 0.00 0.00 1.78
226 228 4.202010 GCAGTGTTATCGGTTTGGCATATT 60.202 41.667 0.00 0.00 0.00 1.28
227 229 5.510671 CAGTGTTATCGGTTTGGCATATTC 58.489 41.667 0.00 0.00 0.00 1.75
228 230 5.065859 CAGTGTTATCGGTTTGGCATATTCA 59.934 40.000 0.00 0.00 0.00 2.57
229 231 5.827797 AGTGTTATCGGTTTGGCATATTCAT 59.172 36.000 0.00 0.00 0.00 2.57
230 232 6.995686 AGTGTTATCGGTTTGGCATATTCATA 59.004 34.615 0.00 0.00 0.00 2.15
231 233 7.665559 AGTGTTATCGGTTTGGCATATTCATAT 59.334 33.333 0.00 0.00 0.00 1.78
232 234 7.962918 GTGTTATCGGTTTGGCATATTCATATC 59.037 37.037 0.00 0.00 0.00 1.63
233 235 7.882791 TGTTATCGGTTTGGCATATTCATATCT 59.117 33.333 0.00 0.00 0.00 1.98
234 236 9.378551 GTTATCGGTTTGGCATATTCATATCTA 57.621 33.333 0.00 0.00 0.00 1.98
235 237 7.849804 ATCGGTTTGGCATATTCATATCTAC 57.150 36.000 0.00 0.00 0.00 2.59
236 238 6.170506 TCGGTTTGGCATATTCATATCTACC 58.829 40.000 0.00 0.00 0.00 3.18
237 239 5.063438 CGGTTTGGCATATTCATATCTACCG 59.937 44.000 0.00 0.00 0.00 4.02
238 240 5.938125 GGTTTGGCATATTCATATCTACCGT 59.062 40.000 0.00 0.00 0.00 4.83
239 241 7.101054 GGTTTGGCATATTCATATCTACCGTA 58.899 38.462 0.00 0.00 0.00 4.02
240 242 7.769044 GGTTTGGCATATTCATATCTACCGTAT 59.231 37.037 0.00 0.00 0.00 3.06
241 243 8.604035 GTTTGGCATATTCATATCTACCGTATG 58.396 37.037 0.00 0.00 0.00 2.39
242 244 7.418337 TGGCATATTCATATCTACCGTATGT 57.582 36.000 0.00 0.00 32.63 2.29
243 245 7.489160 TGGCATATTCATATCTACCGTATGTC 58.511 38.462 0.00 0.00 32.63 3.06
244 246 6.637254 GGCATATTCATATCTACCGTATGTCG 59.363 42.308 0.00 0.00 39.52 4.35
245 247 7.194278 GCATATTCATATCTACCGTATGTCGT 58.806 38.462 0.00 0.00 37.94 4.34
246 248 7.376336 GCATATTCATATCTACCGTATGTCGTC 59.624 40.741 0.00 0.00 37.94 4.20
247 249 4.916099 TCATATCTACCGTATGTCGTCG 57.084 45.455 0.00 0.00 37.94 5.12
248 250 4.559153 TCATATCTACCGTATGTCGTCGA 58.441 43.478 0.00 0.00 37.94 4.20
249 251 5.173664 TCATATCTACCGTATGTCGTCGAT 58.826 41.667 0.00 0.00 37.94 3.59
250 252 5.290400 TCATATCTACCGTATGTCGTCGATC 59.710 44.000 0.00 0.00 37.94 3.69
251 253 1.788886 TCTACCGTATGTCGTCGATCG 59.211 52.381 9.36 9.36 41.41 3.69
252 254 1.524355 CTACCGTATGTCGTCGATCGT 59.476 52.381 15.94 0.00 40.80 3.73
253 255 0.729116 ACCGTATGTCGTCGATCGTT 59.271 50.000 15.94 0.00 40.80 3.85
254 256 1.110085 CCGTATGTCGTCGATCGTTG 58.890 55.000 15.94 8.95 40.80 4.10
255 257 1.530441 CCGTATGTCGTCGATCGTTGT 60.530 52.381 15.94 0.00 40.80 3.32
256 258 2.171567 CGTATGTCGTCGATCGTTGTT 58.828 47.619 15.94 0.00 40.80 2.83
257 259 2.591148 CGTATGTCGTCGATCGTTGTTT 59.409 45.455 15.94 0.04 40.80 2.83
258 260 3.058520 CGTATGTCGTCGATCGTTGTTTT 59.941 43.478 15.94 0.55 40.80 2.43
259 261 3.700130 ATGTCGTCGATCGTTGTTTTC 57.300 42.857 15.94 1.79 40.80 2.29
260 262 2.461903 TGTCGTCGATCGTTGTTTTCA 58.538 42.857 15.94 4.29 40.80 2.69
261 263 3.054166 TGTCGTCGATCGTTGTTTTCAT 58.946 40.909 15.94 0.00 40.80 2.57
262 264 3.120616 TGTCGTCGATCGTTGTTTTCATC 59.879 43.478 15.94 0.00 40.80 2.92
263 265 2.340283 TCGTCGATCGTTGTTTTCATCG 59.660 45.455 15.94 5.99 42.28 3.84
264 266 2.418714 GTCGATCGTTGTTTTCATCGC 58.581 47.619 15.94 0.00 41.17 4.58
265 267 2.092211 GTCGATCGTTGTTTTCATCGCT 59.908 45.455 15.94 0.00 41.17 4.93
266 268 2.734606 TCGATCGTTGTTTTCATCGCTT 59.265 40.909 15.94 0.00 41.17 4.68
267 269 3.185594 TCGATCGTTGTTTTCATCGCTTT 59.814 39.130 15.94 0.00 41.17 3.51
268 270 3.534516 CGATCGTTGTTTTCATCGCTTTC 59.465 43.478 7.03 0.00 41.17 2.62
269 271 2.898746 TCGTTGTTTTCATCGCTTTCG 58.101 42.857 0.00 0.00 41.17 3.46
270 272 1.969256 CGTTGTTTTCATCGCTTTCGG 59.031 47.619 0.00 0.00 36.47 4.30
271 273 2.315901 GTTGTTTTCATCGCTTTCGGG 58.684 47.619 0.00 0.00 36.13 5.14
272 274 1.600023 TGTTTTCATCGCTTTCGGGT 58.400 45.000 0.00 0.00 36.13 5.28
273 275 1.950909 TGTTTTCATCGCTTTCGGGTT 59.049 42.857 0.00 0.00 36.13 4.11
274 276 2.359531 TGTTTTCATCGCTTTCGGGTTT 59.640 40.909 0.00 0.00 36.13 3.27
275 277 3.181485 TGTTTTCATCGCTTTCGGGTTTT 60.181 39.130 0.00 0.00 36.13 2.43
276 278 4.036498 TGTTTTCATCGCTTTCGGGTTTTA 59.964 37.500 0.00 0.00 36.13 1.52
277 279 5.158494 GTTTTCATCGCTTTCGGGTTTTAT 58.842 37.500 0.00 0.00 36.13 1.40
278 280 5.379732 TTTCATCGCTTTCGGGTTTTATT 57.620 34.783 0.00 0.00 36.13 1.40
279 281 5.379732 TTCATCGCTTTCGGGTTTTATTT 57.620 34.783 0.00 0.00 36.13 1.40
280 282 5.379732 TCATCGCTTTCGGGTTTTATTTT 57.620 34.783 0.00 0.00 36.13 1.82
281 283 5.774630 TCATCGCTTTCGGGTTTTATTTTT 58.225 33.333 0.00 0.00 36.13 1.94
282 284 6.910995 TCATCGCTTTCGGGTTTTATTTTTA 58.089 32.000 0.00 0.00 36.13 1.52
283 285 7.540299 TCATCGCTTTCGGGTTTTATTTTTAT 58.460 30.769 0.00 0.00 36.13 1.40
284 286 8.030106 TCATCGCTTTCGGGTTTTATTTTTATT 58.970 29.630 0.00 0.00 36.13 1.40
285 287 8.652463 CATCGCTTTCGGGTTTTATTTTTATTT 58.348 29.630 0.00 0.00 36.13 1.40
286 288 8.590719 TCGCTTTCGGGTTTTATTTTTATTTT 57.409 26.923 0.00 0.00 36.13 1.82
287 289 9.043079 TCGCTTTCGGGTTTTATTTTTATTTTT 57.957 25.926 0.00 0.00 36.13 1.94
313 315 3.963428 CCGCCTAGGTATAGCTTCATT 57.037 47.619 10.19 0.00 34.51 2.57
314 316 3.851098 CCGCCTAGGTATAGCTTCATTC 58.149 50.000 10.19 0.00 34.51 2.67
315 317 3.511934 CCGCCTAGGTATAGCTTCATTCT 59.488 47.826 10.19 0.00 34.51 2.40
316 318 4.021016 CCGCCTAGGTATAGCTTCATTCTT 60.021 45.833 10.19 0.00 34.51 2.52
317 319 4.926238 CGCCTAGGTATAGCTTCATTCTTG 59.074 45.833 10.19 0.00 0.00 3.02
318 320 5.279006 CGCCTAGGTATAGCTTCATTCTTGA 60.279 44.000 10.19 0.00 0.00 3.02
319 321 6.525629 GCCTAGGTATAGCTTCATTCTTGAA 58.474 40.000 10.19 0.00 39.54 2.69
320 322 7.164803 GCCTAGGTATAGCTTCATTCTTGAAT 58.835 38.462 10.19 0.00 40.95 2.57
321 323 7.118971 GCCTAGGTATAGCTTCATTCTTGAATG 59.881 40.741 10.19 15.07 40.95 2.67
322 324 8.370940 CCTAGGTATAGCTTCATTCTTGAATGA 58.629 37.037 18.67 18.67 40.95 2.57
323 325 9.202273 CTAGGTATAGCTTCATTCTTGAATGAC 57.798 37.037 21.33 13.27 40.95 3.06
324 326 7.800092 AGGTATAGCTTCATTCTTGAATGACT 58.200 34.615 21.33 18.20 40.95 3.41
325 327 8.270744 AGGTATAGCTTCATTCTTGAATGACTT 58.729 33.333 21.33 13.75 40.95 3.01
326 328 8.897752 GGTATAGCTTCATTCTTGAATGACTTT 58.102 33.333 21.33 14.64 40.95 2.66
327 329 9.713740 GTATAGCTTCATTCTTGAATGACTTTG 57.286 33.333 21.33 14.13 40.95 2.77
328 330 5.467705 AGCTTCATTCTTGAATGACTTTGC 58.532 37.500 21.33 20.33 40.95 3.68
329 331 5.243283 AGCTTCATTCTTGAATGACTTTGCT 59.757 36.000 21.33 21.63 40.95 3.91
330 332 6.432162 AGCTTCATTCTTGAATGACTTTGCTA 59.568 34.615 21.33 8.04 40.95 3.49
331 333 7.122353 AGCTTCATTCTTGAATGACTTTGCTAT 59.878 33.333 21.33 9.22 40.95 2.97
332 334 7.758528 GCTTCATTCTTGAATGACTTTGCTATT 59.241 33.333 21.33 0.00 40.95 1.73
333 335 9.635520 CTTCATTCTTGAATGACTTTGCTATTT 57.364 29.630 21.33 0.00 40.95 1.40
334 336 8.975410 TCATTCTTGAATGACTTTGCTATTTG 57.025 30.769 18.67 0.00 34.50 2.32
335 337 7.543172 TCATTCTTGAATGACTTTGCTATTTGC 59.457 33.333 18.67 0.00 36.92 3.68
336 338 5.713025 TCTTGAATGACTTTGCTATTTGCC 58.287 37.500 0.00 0.00 42.00 4.52
337 339 4.095410 TGAATGACTTTGCTATTTGCCG 57.905 40.909 0.00 0.00 42.00 5.69
338 340 3.119531 TGAATGACTTTGCTATTTGCCGG 60.120 43.478 0.00 0.00 42.00 6.13
339 341 0.525761 TGACTTTGCTATTTGCCGGC 59.474 50.000 22.73 22.73 42.00 6.13
340 342 0.525761 GACTTTGCTATTTGCCGGCA 59.474 50.000 29.03 29.03 42.00 5.69
341 343 1.134946 GACTTTGCTATTTGCCGGCAT 59.865 47.619 33.25 19.97 42.00 4.40
342 344 1.135024 ACTTTGCTATTTGCCGGCATG 60.135 47.619 33.25 20.90 42.00 4.06
343 345 1.134753 CTTTGCTATTTGCCGGCATGA 59.865 47.619 33.25 22.70 42.00 3.07
344 346 1.401761 TTGCTATTTGCCGGCATGAT 58.598 45.000 33.25 27.52 42.00 2.45
345 347 2.268762 TGCTATTTGCCGGCATGATA 57.731 45.000 33.25 27.17 42.00 2.15
346 348 1.879380 TGCTATTTGCCGGCATGATAC 59.121 47.619 33.25 20.27 42.00 2.24
347 349 2.154462 GCTATTTGCCGGCATGATACT 58.846 47.619 33.25 12.23 35.15 2.12
348 350 2.554032 GCTATTTGCCGGCATGATACTT 59.446 45.455 33.25 12.27 35.15 2.24
349 351 3.004734 GCTATTTGCCGGCATGATACTTT 59.995 43.478 33.25 11.19 35.15 2.66
350 352 2.937469 TTTGCCGGCATGATACTTTG 57.063 45.000 33.25 0.00 0.00 2.77
351 353 1.832883 TTGCCGGCATGATACTTTGT 58.167 45.000 33.25 0.00 0.00 2.83
352 354 1.093972 TGCCGGCATGATACTTTGTG 58.906 50.000 29.03 0.00 0.00 3.33
353 355 1.094785 GCCGGCATGATACTTTGTGT 58.905 50.000 24.80 0.00 0.00 3.72
354 356 1.202177 GCCGGCATGATACTTTGTGTG 60.202 52.381 24.80 0.00 0.00 3.82
355 357 1.202177 CCGGCATGATACTTTGTGTGC 60.202 52.381 0.00 0.00 0.00 4.57
356 358 1.529622 CGGCATGATACTTTGTGTGCG 60.530 52.381 0.00 0.00 33.62 5.34
357 359 1.468520 GGCATGATACTTTGTGTGCGT 59.531 47.619 0.00 0.00 33.62 5.24
358 360 2.508867 GCATGATACTTTGTGTGCGTG 58.491 47.619 0.00 0.00 0.00 5.34
359 361 2.095768 GCATGATACTTTGTGTGCGTGT 60.096 45.455 0.00 0.00 0.00 4.49
360 362 3.481839 CATGATACTTTGTGTGCGTGTG 58.518 45.455 0.00 0.00 0.00 3.82
361 363 2.556257 TGATACTTTGTGTGCGTGTGT 58.444 42.857 0.00 0.00 0.00 3.72
362 364 2.939756 TGATACTTTGTGTGCGTGTGTT 59.060 40.909 0.00 0.00 0.00 3.32
363 365 3.375610 TGATACTTTGTGTGCGTGTGTTT 59.624 39.130 0.00 0.00 0.00 2.83
364 366 2.256445 ACTTTGTGTGCGTGTGTTTC 57.744 45.000 0.00 0.00 0.00 2.78
365 367 1.537638 ACTTTGTGTGCGTGTGTTTCA 59.462 42.857 0.00 0.00 0.00 2.69
366 368 2.163412 ACTTTGTGTGCGTGTGTTTCAT 59.837 40.909 0.00 0.00 0.00 2.57
367 369 2.185867 TTGTGTGCGTGTGTTTCATG 57.814 45.000 0.00 0.00 36.25 3.07
368 370 1.090728 TGTGTGCGTGTGTTTCATGT 58.909 45.000 0.00 0.00 35.64 3.21
369 371 1.470494 TGTGTGCGTGTGTTTCATGTT 59.530 42.857 0.00 0.00 35.64 2.71
370 372 1.845568 GTGTGCGTGTGTTTCATGTTG 59.154 47.619 0.00 0.00 35.64 3.33
371 373 1.202234 TGTGCGTGTGTTTCATGTTGG 60.202 47.619 0.00 0.00 35.64 3.77
372 374 1.098869 TGCGTGTGTTTCATGTTGGT 58.901 45.000 0.00 0.00 35.64 3.67
373 375 1.474478 TGCGTGTGTTTCATGTTGGTT 59.526 42.857 0.00 0.00 35.64 3.67
374 376 1.851666 GCGTGTGTTTCATGTTGGTTG 59.148 47.619 0.00 0.00 35.64 3.77
375 377 2.733858 GCGTGTGTTTCATGTTGGTTGT 60.734 45.455 0.00 0.00 35.64 3.32
376 378 2.851235 CGTGTGTTTCATGTTGGTTGTG 59.149 45.455 0.00 0.00 0.00 3.33
377 379 3.671971 CGTGTGTTTCATGTTGGTTGTGT 60.672 43.478 0.00 0.00 0.00 3.72
378 380 3.611986 GTGTGTTTCATGTTGGTTGTGTG 59.388 43.478 0.00 0.00 0.00 3.82
379 381 3.256879 TGTGTTTCATGTTGGTTGTGTGT 59.743 39.130 0.00 0.00 0.00 3.72
380 382 4.459337 TGTGTTTCATGTTGGTTGTGTGTA 59.541 37.500 0.00 0.00 0.00 2.90
381 383 5.126222 TGTGTTTCATGTTGGTTGTGTGTAT 59.874 36.000 0.00 0.00 0.00 2.29
382 384 5.685511 GTGTTTCATGTTGGTTGTGTGTATC 59.314 40.000 0.00 0.00 0.00 2.24
383 385 5.358160 TGTTTCATGTTGGTTGTGTGTATCA 59.642 36.000 0.00 0.00 0.00 2.15
384 386 6.040278 TGTTTCATGTTGGTTGTGTGTATCAT 59.960 34.615 0.00 0.00 0.00 2.45
385 387 7.229506 TGTTTCATGTTGGTTGTGTGTATCATA 59.770 33.333 0.00 0.00 0.00 2.15
386 388 6.983474 TCATGTTGGTTGTGTGTATCATAG 57.017 37.500 0.00 0.00 0.00 2.23
387 389 6.472016 TCATGTTGGTTGTGTGTATCATAGT 58.528 36.000 0.00 0.00 0.00 2.12
388 390 6.939730 TCATGTTGGTTGTGTGTATCATAGTT 59.060 34.615 0.00 0.00 0.00 2.24
389 391 8.097662 TCATGTTGGTTGTGTGTATCATAGTTA 58.902 33.333 0.00 0.00 0.00 2.24
390 392 8.892723 CATGTTGGTTGTGTGTATCATAGTTAT 58.107 33.333 0.00 0.00 0.00 1.89
391 393 8.262715 TGTTGGTTGTGTGTATCATAGTTATG 57.737 34.615 0.00 0.00 35.04 1.90
392 394 6.918892 TGGTTGTGTGTATCATAGTTATGC 57.081 37.500 0.00 0.00 33.76 3.14
393 395 6.410540 TGGTTGTGTGTATCATAGTTATGCA 58.589 36.000 0.00 0.00 33.76 3.96
394 396 6.538381 TGGTTGTGTGTATCATAGTTATGCAG 59.462 38.462 0.00 0.00 33.76 4.41
395 397 6.761242 GGTTGTGTGTATCATAGTTATGCAGA 59.239 38.462 0.00 0.00 33.76 4.26
396 398 7.042456 GGTTGTGTGTATCATAGTTATGCAGAG 60.042 40.741 0.00 0.00 33.76 3.35
397 399 6.515832 TGTGTGTATCATAGTTATGCAGAGG 58.484 40.000 0.00 0.00 33.76 3.69
398 400 5.406780 GTGTGTATCATAGTTATGCAGAGGC 59.593 44.000 0.00 0.00 41.68 4.70
399 401 4.932200 GTGTATCATAGTTATGCAGAGGCC 59.068 45.833 0.00 0.00 40.13 5.19
400 402 2.820059 TCATAGTTATGCAGAGGCCG 57.180 50.000 0.00 0.00 40.13 6.13
401 403 1.344438 TCATAGTTATGCAGAGGCCGG 59.656 52.381 0.00 0.00 40.13 6.13
402 404 1.344438 CATAGTTATGCAGAGGCCGGA 59.656 52.381 5.05 0.00 40.13 5.14
403 405 1.717032 TAGTTATGCAGAGGCCGGAT 58.283 50.000 5.05 0.00 40.13 4.18
404 406 0.107456 AGTTATGCAGAGGCCGGATG 59.893 55.000 5.05 0.00 40.13 3.51
405 407 0.179045 GTTATGCAGAGGCCGGATGT 60.179 55.000 5.05 0.00 40.13 3.06
406 408 0.179048 TTATGCAGAGGCCGGATGTG 60.179 55.000 5.05 2.10 40.13 3.21
407 409 1.337384 TATGCAGAGGCCGGATGTGT 61.337 55.000 5.05 0.00 40.13 3.72
408 410 1.337384 ATGCAGAGGCCGGATGTGTA 61.337 55.000 5.05 0.74 40.13 2.90
409 411 1.521681 GCAGAGGCCGGATGTGTAC 60.522 63.158 5.05 0.00 0.00 2.90
410 412 1.961180 GCAGAGGCCGGATGTGTACT 61.961 60.000 5.05 0.00 0.00 2.73
411 413 0.103208 CAGAGGCCGGATGTGTACTC 59.897 60.000 5.05 0.00 0.00 2.59
412 414 0.324368 AGAGGCCGGATGTGTACTCA 60.324 55.000 5.05 0.00 0.00 3.41
413 415 0.179108 GAGGCCGGATGTGTACTCAC 60.179 60.000 5.05 0.00 44.08 3.51
414 416 0.614979 AGGCCGGATGTGTACTCACT 60.615 55.000 5.05 0.00 44.14 3.41
415 417 1.108776 GGCCGGATGTGTACTCACTA 58.891 55.000 5.05 0.00 44.14 2.74
416 418 1.687123 GGCCGGATGTGTACTCACTAT 59.313 52.381 5.05 0.00 44.14 2.12
417 419 2.889045 GGCCGGATGTGTACTCACTATA 59.111 50.000 5.05 0.00 44.14 1.31
418 420 3.319972 GGCCGGATGTGTACTCACTATAA 59.680 47.826 5.05 0.00 44.14 0.98
419 421 4.021368 GGCCGGATGTGTACTCACTATAAT 60.021 45.833 5.05 0.00 44.14 1.28
420 422 5.510861 GGCCGGATGTGTACTCACTATAATT 60.511 44.000 5.05 0.00 44.14 1.40
421 423 5.405571 GCCGGATGTGTACTCACTATAATTG 59.594 44.000 5.05 0.00 44.14 2.32
422 424 6.513180 CCGGATGTGTACTCACTATAATTGT 58.487 40.000 0.00 0.00 44.14 2.71
423 425 7.654568 CCGGATGTGTACTCACTATAATTGTA 58.345 38.462 0.00 0.00 44.14 2.41
424 426 7.594015 CCGGATGTGTACTCACTATAATTGTAC 59.406 40.741 0.00 0.00 44.14 2.90
425 427 7.594015 CGGATGTGTACTCACTATAATTGTACC 59.406 40.741 0.00 0.00 44.14 3.34
426 428 7.594015 GGATGTGTACTCACTATAATTGTACCG 59.406 40.741 0.00 0.00 44.14 4.02
427 429 6.267817 TGTGTACTCACTATAATTGTACCGC 58.732 40.000 0.00 0.00 44.14 5.68
428 430 6.095860 TGTGTACTCACTATAATTGTACCGCT 59.904 38.462 0.00 0.00 44.14 5.52
429 431 6.976925 GTGTACTCACTATAATTGTACCGCTT 59.023 38.462 0.00 0.00 40.98 4.68
430 432 6.976349 TGTACTCACTATAATTGTACCGCTTG 59.024 38.462 0.00 0.00 34.37 4.01
431 433 6.216801 ACTCACTATAATTGTACCGCTTGA 57.783 37.500 0.00 0.00 0.00 3.02
432 434 6.817184 ACTCACTATAATTGTACCGCTTGAT 58.183 36.000 0.00 0.00 0.00 2.57
433 435 6.701841 ACTCACTATAATTGTACCGCTTGATG 59.298 38.462 0.00 0.00 0.00 3.07
434 436 5.465390 TCACTATAATTGTACCGCTTGATGC 59.535 40.000 0.00 0.00 38.57 3.91
435 437 5.466728 CACTATAATTGTACCGCTTGATGCT 59.533 40.000 0.00 0.00 40.11 3.79
436 438 6.645003 CACTATAATTGTACCGCTTGATGCTA 59.355 38.462 0.00 0.00 40.11 3.49
437 439 6.868864 ACTATAATTGTACCGCTTGATGCTAG 59.131 38.462 0.00 0.00 40.11 3.42
438 440 3.819564 ATTGTACCGCTTGATGCTAGA 57.180 42.857 0.00 0.00 40.11 2.43
439 441 3.819564 TTGTACCGCTTGATGCTAGAT 57.180 42.857 0.00 0.00 40.11 1.98
440 442 3.819564 TGTACCGCTTGATGCTAGATT 57.180 42.857 0.00 0.00 40.11 2.40
441 443 4.137116 TGTACCGCTTGATGCTAGATTT 57.863 40.909 0.00 0.00 40.11 2.17
442 444 3.871006 TGTACCGCTTGATGCTAGATTTG 59.129 43.478 0.00 0.00 40.11 2.32
443 445 2.292267 ACCGCTTGATGCTAGATTTGG 58.708 47.619 0.00 0.00 40.11 3.28
444 446 2.092968 ACCGCTTGATGCTAGATTTGGA 60.093 45.455 0.00 0.00 40.11 3.53
445 447 2.547211 CCGCTTGATGCTAGATTTGGAG 59.453 50.000 0.00 0.00 40.11 3.86
446 448 3.201290 CGCTTGATGCTAGATTTGGAGT 58.799 45.455 0.00 0.00 40.11 3.85
447 449 3.247173 CGCTTGATGCTAGATTTGGAGTC 59.753 47.826 0.00 0.00 40.11 3.36
448 450 4.194640 GCTTGATGCTAGATTTGGAGTCA 58.805 43.478 0.00 0.00 38.95 3.41
449 451 4.637534 GCTTGATGCTAGATTTGGAGTCAA 59.362 41.667 0.00 0.00 38.95 3.18
450 452 5.298777 GCTTGATGCTAGATTTGGAGTCAAT 59.701 40.000 0.00 0.00 38.95 2.57
451 453 6.484643 GCTTGATGCTAGATTTGGAGTCAATA 59.515 38.462 0.00 0.00 38.95 1.90
452 454 7.012704 GCTTGATGCTAGATTTGGAGTCAATAA 59.987 37.037 0.00 0.00 38.95 1.40
453 455 8.806429 TTGATGCTAGATTTGGAGTCAATAAA 57.194 30.769 0.00 0.00 32.28 1.40
454 456 8.806429 TGATGCTAGATTTGGAGTCAATAAAA 57.194 30.769 0.00 0.00 32.28 1.52
455 457 9.241919 TGATGCTAGATTTGGAGTCAATAAAAA 57.758 29.630 0.00 0.00 32.28 1.94
493 495 6.745794 AAAAATATCTCAGGAGAGGGAGAG 57.254 41.667 5.14 0.00 42.91 3.20
494 496 5.417170 AAATATCTCAGGAGAGGGAGAGT 57.583 43.478 5.14 0.00 42.91 3.24
495 497 6.538209 AAATATCTCAGGAGAGGGAGAGTA 57.462 41.667 5.14 0.00 42.91 2.59
496 498 6.734918 AATATCTCAGGAGAGGGAGAGTAT 57.265 41.667 5.14 0.00 42.91 2.12
497 499 7.838991 AATATCTCAGGAGAGGGAGAGTATA 57.161 40.000 5.14 0.00 42.91 1.47
498 500 5.779241 ATCTCAGGAGAGGGAGAGTATAG 57.221 47.826 5.14 0.00 42.91 1.31
499 501 4.833672 TCTCAGGAGAGGGAGAGTATAGA 58.166 47.826 0.00 0.00 42.34 1.98
500 502 5.228383 TCTCAGGAGAGGGAGAGTATAGAA 58.772 45.833 0.00 0.00 42.34 2.10
501 503 5.672653 TCTCAGGAGAGGGAGAGTATAGAAA 59.327 44.000 0.00 0.00 42.34 2.52
502 504 5.697067 TCAGGAGAGGGAGAGTATAGAAAC 58.303 45.833 0.00 0.00 0.00 2.78
503 505 4.830600 CAGGAGAGGGAGAGTATAGAAACC 59.169 50.000 0.00 0.00 0.00 3.27
504 506 4.140876 AGGAGAGGGAGAGTATAGAAACCC 60.141 50.000 0.00 0.00 37.79 4.11
506 508 5.460416 GAGAGGGAGAGTATAGAAACCCTT 58.540 45.833 0.00 0.00 46.25 3.95
507 509 5.212745 AGAGGGAGAGTATAGAAACCCTTG 58.787 45.833 0.00 0.00 46.25 3.61
508 510 5.043281 AGAGGGAGAGTATAGAAACCCTTGA 60.043 44.000 0.00 0.00 46.25 3.02
509 511 4.963628 AGGGAGAGTATAGAAACCCTTGAC 59.036 45.833 0.00 0.00 44.27 3.18
510 512 4.715297 GGGAGAGTATAGAAACCCTTGACA 59.285 45.833 0.00 0.00 35.03 3.58
511 513 5.395435 GGGAGAGTATAGAAACCCTTGACAC 60.395 48.000 0.00 0.00 35.03 3.67
512 514 5.187186 GGAGAGTATAGAAACCCTTGACACA 59.813 44.000 0.00 0.00 0.00 3.72
513 515 6.287589 AGAGTATAGAAACCCTTGACACAG 57.712 41.667 0.00 0.00 0.00 3.66
514 516 6.017192 AGAGTATAGAAACCCTTGACACAGA 58.983 40.000 0.00 0.00 0.00 3.41
515 517 6.670027 AGAGTATAGAAACCCTTGACACAGAT 59.330 38.462 0.00 0.00 0.00 2.90
516 518 6.644347 AGTATAGAAACCCTTGACACAGATG 58.356 40.000 0.00 0.00 0.00 2.90
517 519 3.146104 AGAAACCCTTGACACAGATGG 57.854 47.619 0.00 0.00 0.00 3.51
518 520 1.541588 GAAACCCTTGACACAGATGGC 59.458 52.381 0.00 0.00 0.00 4.40
519 521 0.773644 AACCCTTGACACAGATGGCT 59.226 50.000 0.00 0.00 33.48 4.75
520 522 0.326264 ACCCTTGACACAGATGGCTC 59.674 55.000 0.00 0.00 33.48 4.70
521 523 0.742281 CCCTTGACACAGATGGCTCG 60.742 60.000 0.00 0.00 33.48 5.03
522 524 0.742281 CCTTGACACAGATGGCTCGG 60.742 60.000 0.00 0.00 33.48 4.63
523 525 0.036952 CTTGACACAGATGGCTCGGT 60.037 55.000 0.00 0.00 33.48 4.69
524 526 1.204704 CTTGACACAGATGGCTCGGTA 59.795 52.381 0.00 0.00 33.48 4.02
525 527 1.262417 TGACACAGATGGCTCGGTAA 58.738 50.000 0.00 0.00 33.48 2.85
526 528 1.067142 TGACACAGATGGCTCGGTAAC 60.067 52.381 0.00 0.00 33.48 2.50
527 529 1.204941 GACACAGATGGCTCGGTAACT 59.795 52.381 0.00 0.00 0.00 2.24
528 530 1.204941 ACACAGATGGCTCGGTAACTC 59.795 52.381 0.00 0.00 0.00 3.01
529 531 0.824759 ACAGATGGCTCGGTAACTCC 59.175 55.000 0.00 0.00 0.00 3.85
530 532 0.824109 CAGATGGCTCGGTAACTCCA 59.176 55.000 0.00 0.00 35.57 3.86
531 533 1.414181 CAGATGGCTCGGTAACTCCAT 59.586 52.381 0.00 0.00 40.15 3.41
532 534 2.119495 AGATGGCTCGGTAACTCCATT 58.881 47.619 0.00 0.00 38.43 3.16
533 535 2.103263 AGATGGCTCGGTAACTCCATTC 59.897 50.000 0.00 0.00 38.43 2.67
534 536 0.539986 TGGCTCGGTAACTCCATTCC 59.460 55.000 0.00 0.00 35.57 3.01
535 537 0.539986 GGCTCGGTAACTCCATTCCA 59.460 55.000 0.00 0.00 35.57 3.53
536 538 1.141053 GGCTCGGTAACTCCATTCCAT 59.859 52.381 0.00 0.00 35.57 3.41
537 539 2.213499 GCTCGGTAACTCCATTCCATG 58.787 52.381 0.00 0.00 35.57 3.66
538 540 2.213499 CTCGGTAACTCCATTCCATGC 58.787 52.381 0.00 0.00 35.57 4.06
539 541 0.937304 CGGTAACTCCATTCCATGCG 59.063 55.000 0.00 0.00 35.57 4.73
540 542 1.308998 GGTAACTCCATTCCATGCGG 58.691 55.000 0.00 0.00 35.97 5.69
541 543 1.408266 GGTAACTCCATTCCATGCGGT 60.408 52.381 0.00 0.00 35.97 5.68
542 544 2.365582 GTAACTCCATTCCATGCGGTT 58.634 47.619 0.00 0.00 0.00 4.44
543 545 1.923356 AACTCCATTCCATGCGGTTT 58.077 45.000 0.00 0.00 0.00 3.27
544 546 1.463674 ACTCCATTCCATGCGGTTTC 58.536 50.000 0.00 0.00 0.00 2.78
545 547 0.740737 CTCCATTCCATGCGGTTTCC 59.259 55.000 0.00 0.00 0.00 3.13
546 548 0.682855 TCCATTCCATGCGGTTTCCC 60.683 55.000 0.00 0.00 0.00 3.97
547 549 0.684153 CCATTCCATGCGGTTTCCCT 60.684 55.000 0.00 0.00 0.00 4.20
548 550 1.185315 CATTCCATGCGGTTTCCCTT 58.815 50.000 0.00 0.00 0.00 3.95
549 551 1.134946 CATTCCATGCGGTTTCCCTTC 59.865 52.381 0.00 0.00 0.00 3.46
550 552 0.610785 TTCCATGCGGTTTCCCTTCC 60.611 55.000 0.00 0.00 0.00 3.46
551 553 1.000896 CCATGCGGTTTCCCTTCCT 60.001 57.895 0.00 0.00 0.00 3.36
552 554 1.315257 CCATGCGGTTTCCCTTCCTG 61.315 60.000 0.00 0.00 0.00 3.86
553 555 0.609131 CATGCGGTTTCCCTTCCTGT 60.609 55.000 0.00 0.00 0.00 4.00
554 556 0.609131 ATGCGGTTTCCCTTCCTGTG 60.609 55.000 0.00 0.00 0.00 3.66
555 557 1.228154 GCGGTTTCCCTTCCTGTGT 60.228 57.895 0.00 0.00 0.00 3.72
556 558 1.515521 GCGGTTTCCCTTCCTGTGTG 61.516 60.000 0.00 0.00 0.00 3.82
557 559 1.515521 CGGTTTCCCTTCCTGTGTGC 61.516 60.000 0.00 0.00 0.00 4.57
558 560 1.515521 GGTTTCCCTTCCTGTGTGCG 61.516 60.000 0.00 0.00 0.00 5.34
559 561 0.534203 GTTTCCCTTCCTGTGTGCGA 60.534 55.000 0.00 0.00 0.00 5.10
560 562 0.181587 TTTCCCTTCCTGTGTGCGAA 59.818 50.000 0.00 0.00 0.00 4.70
561 563 0.181587 TTCCCTTCCTGTGTGCGAAA 59.818 50.000 0.00 0.00 0.00 3.46
562 564 0.181587 TCCCTTCCTGTGTGCGAAAA 59.818 50.000 0.00 0.00 0.00 2.29
563 565 0.593128 CCCTTCCTGTGTGCGAAAAG 59.407 55.000 0.00 0.00 0.00 2.27
564 566 0.593128 CCTTCCTGTGTGCGAAAAGG 59.407 55.000 0.00 0.00 0.00 3.11
565 567 0.593128 CTTCCTGTGTGCGAAAAGGG 59.407 55.000 0.00 0.00 0.00 3.95
566 568 0.181587 TTCCTGTGTGCGAAAAGGGA 59.818 50.000 0.00 0.00 0.00 4.20
567 569 0.250295 TCCTGTGTGCGAAAAGGGAG 60.250 55.000 0.00 0.00 0.00 4.30
568 570 1.576421 CTGTGTGCGAAAAGGGAGC 59.424 57.895 0.00 0.00 0.00 4.70
569 571 1.153066 TGTGTGCGAAAAGGGAGCA 60.153 52.632 0.00 0.00 38.71 4.26
570 572 0.537143 TGTGTGCGAAAAGGGAGCAT 60.537 50.000 0.00 0.00 43.17 3.79
571 573 0.109597 GTGTGCGAAAAGGGAGCATG 60.110 55.000 0.00 0.00 43.17 4.06
572 574 0.537143 TGTGCGAAAAGGGAGCATGT 60.537 50.000 0.00 0.00 43.17 3.21
573 575 0.109597 GTGCGAAAAGGGAGCATGTG 60.110 55.000 0.00 0.00 43.17 3.21
574 576 0.250684 TGCGAAAAGGGAGCATGTGA 60.251 50.000 0.00 0.00 35.81 3.58
575 577 1.098050 GCGAAAAGGGAGCATGTGAT 58.902 50.000 0.00 0.00 0.00 3.06
576 578 1.202222 GCGAAAAGGGAGCATGTGATG 60.202 52.381 0.00 0.00 0.00 3.07
577 579 1.402968 CGAAAAGGGAGCATGTGATGG 59.597 52.381 0.00 0.00 0.00 3.51
578 580 1.135721 GAAAAGGGAGCATGTGATGGC 59.864 52.381 0.00 0.00 0.00 4.40
579 581 0.685458 AAAGGGAGCATGTGATGGCC 60.685 55.000 0.00 0.00 0.00 5.36
580 582 1.866483 AAGGGAGCATGTGATGGCCA 61.866 55.000 8.56 8.56 0.00 5.36
581 583 1.152610 GGGAGCATGTGATGGCCAT 60.153 57.895 20.96 20.96 0.00 4.40
582 584 0.757935 GGGAGCATGTGATGGCCATT 60.758 55.000 21.84 0.51 0.00 3.16
583 585 1.479205 GGGAGCATGTGATGGCCATTA 60.479 52.381 21.84 14.01 0.00 1.90
584 586 1.884579 GGAGCATGTGATGGCCATTAG 59.115 52.381 21.84 5.22 0.00 1.73
585 587 2.579873 GAGCATGTGATGGCCATTAGT 58.420 47.619 21.84 4.49 0.00 2.24
586 588 2.292569 GAGCATGTGATGGCCATTAGTG 59.707 50.000 21.84 17.57 0.00 2.74
587 589 2.026641 GCATGTGATGGCCATTAGTGT 58.973 47.619 21.84 0.00 0.00 3.55
588 590 2.428171 GCATGTGATGGCCATTAGTGTT 59.572 45.455 21.84 0.00 0.00 3.32
589 591 3.119029 GCATGTGATGGCCATTAGTGTTT 60.119 43.478 21.84 0.00 0.00 2.83
590 592 4.621274 GCATGTGATGGCCATTAGTGTTTT 60.621 41.667 21.84 0.00 0.00 2.43
591 593 5.481105 CATGTGATGGCCATTAGTGTTTTT 58.519 37.500 21.84 0.00 0.00 1.94
592 594 4.880759 TGTGATGGCCATTAGTGTTTTTG 58.119 39.130 21.84 0.00 0.00 2.44
593 595 4.586421 TGTGATGGCCATTAGTGTTTTTGA 59.414 37.500 21.84 0.00 0.00 2.69
594 596 5.245751 TGTGATGGCCATTAGTGTTTTTGAT 59.754 36.000 21.84 0.00 0.00 2.57
595 597 5.577945 GTGATGGCCATTAGTGTTTTTGATG 59.422 40.000 21.84 0.00 0.00 3.07
596 598 4.533919 TGGCCATTAGTGTTTTTGATGG 57.466 40.909 0.00 0.00 40.13 3.51
600 602 4.414852 CCATTAGTGTTTTTGATGGCTCG 58.585 43.478 0.00 0.00 31.77 5.03
601 603 4.155826 CCATTAGTGTTTTTGATGGCTCGA 59.844 41.667 0.00 0.00 31.77 4.04
602 604 5.335583 CCATTAGTGTTTTTGATGGCTCGAA 60.336 40.000 0.00 0.00 31.77 3.71
603 605 5.759506 TTAGTGTTTTTGATGGCTCGAAA 57.240 34.783 0.00 0.00 33.74 3.46
604 606 4.647424 AGTGTTTTTGATGGCTCGAAAA 57.353 36.364 7.56 7.56 40.76 2.29
605 607 5.200368 AGTGTTTTTGATGGCTCGAAAAT 57.800 34.783 12.26 0.00 43.39 1.82
606 608 5.600696 AGTGTTTTTGATGGCTCGAAAATT 58.399 33.333 12.26 3.69 43.39 1.82
607 609 5.463061 AGTGTTTTTGATGGCTCGAAAATTG 59.537 36.000 12.26 0.00 43.39 2.32
608 610 5.234116 GTGTTTTTGATGGCTCGAAAATTGT 59.766 36.000 12.26 0.00 43.39 2.71
609 611 5.461737 TGTTTTTGATGGCTCGAAAATTGTC 59.538 36.000 12.26 0.00 43.39 3.18
610 612 5.452078 TTTTGATGGCTCGAAAATTGTCT 57.548 34.783 0.00 0.00 32.84 3.41
611 613 4.685169 TTGATGGCTCGAAAATTGTCTC 57.315 40.909 0.00 0.00 0.00 3.36
612 614 3.942829 TGATGGCTCGAAAATTGTCTCT 58.057 40.909 0.00 0.00 0.00 3.10
613 615 3.686241 TGATGGCTCGAAAATTGTCTCTG 59.314 43.478 0.00 0.00 0.00 3.35
614 616 3.401033 TGGCTCGAAAATTGTCTCTGA 57.599 42.857 0.00 0.00 0.00 3.27
615 617 3.738982 TGGCTCGAAAATTGTCTCTGAA 58.261 40.909 0.00 0.00 0.00 3.02
616 618 3.498397 TGGCTCGAAAATTGTCTCTGAAC 59.502 43.478 0.00 0.00 0.00 3.18
617 619 3.120165 GGCTCGAAAATTGTCTCTGAACC 60.120 47.826 0.00 0.00 0.00 3.62
618 620 3.748568 GCTCGAAAATTGTCTCTGAACCT 59.251 43.478 0.00 0.00 0.00 3.50
619 621 4.377841 GCTCGAAAATTGTCTCTGAACCTG 60.378 45.833 0.00 0.00 0.00 4.00
620 622 3.498397 TCGAAAATTGTCTCTGAACCTGC 59.502 43.478 0.00 0.00 0.00 4.85
621 623 3.499918 CGAAAATTGTCTCTGAACCTGCT 59.500 43.478 0.00 0.00 0.00 4.24
622 624 4.023707 CGAAAATTGTCTCTGAACCTGCTT 60.024 41.667 0.00 0.00 0.00 3.91
623 625 5.179368 CGAAAATTGTCTCTGAACCTGCTTA 59.821 40.000 0.00 0.00 0.00 3.09
624 626 6.128172 CGAAAATTGTCTCTGAACCTGCTTAT 60.128 38.462 0.00 0.00 0.00 1.73
625 627 7.530426 AAAATTGTCTCTGAACCTGCTTATT 57.470 32.000 0.00 0.00 0.00 1.40
626 628 6.749923 AATTGTCTCTGAACCTGCTTATTC 57.250 37.500 0.00 0.00 0.00 1.75
627 629 4.207891 TGTCTCTGAACCTGCTTATTCC 57.792 45.455 0.00 0.00 0.00 3.01
628 630 3.582647 TGTCTCTGAACCTGCTTATTCCA 59.417 43.478 0.00 0.00 0.00 3.53
629 631 4.041567 TGTCTCTGAACCTGCTTATTCCAA 59.958 41.667 0.00 0.00 0.00 3.53
630 632 5.003804 GTCTCTGAACCTGCTTATTCCAAA 58.996 41.667 0.00 0.00 0.00 3.28
631 633 5.649831 GTCTCTGAACCTGCTTATTCCAAAT 59.350 40.000 0.00 0.00 0.00 2.32
632 634 5.649395 TCTCTGAACCTGCTTATTCCAAATG 59.351 40.000 0.00 0.00 0.00 2.32
633 635 5.569355 TCTGAACCTGCTTATTCCAAATGA 58.431 37.500 0.00 0.00 0.00 2.57
634 636 6.189859 TCTGAACCTGCTTATTCCAAATGAT 58.810 36.000 0.00 0.00 0.00 2.45
635 637 6.664816 TCTGAACCTGCTTATTCCAAATGATT 59.335 34.615 0.00 0.00 0.00 2.57
636 638 7.833682 TCTGAACCTGCTTATTCCAAATGATTA 59.166 33.333 0.00 0.00 0.00 1.75
637 639 8.537728 TGAACCTGCTTATTCCAAATGATTAT 57.462 30.769 0.00 0.00 0.00 1.28
638 640 8.415553 TGAACCTGCTTATTCCAAATGATTATG 58.584 33.333 0.00 0.00 0.00 1.90
639 641 8.537728 AACCTGCTTATTCCAAATGATTATGA 57.462 30.769 0.00 0.00 0.00 2.15
640 642 7.945134 ACCTGCTTATTCCAAATGATTATGAC 58.055 34.615 0.00 0.00 0.00 3.06
641 643 7.781693 ACCTGCTTATTCCAAATGATTATGACT 59.218 33.333 0.00 0.00 0.00 3.41
642 644 8.636213 CCTGCTTATTCCAAATGATTATGACTT 58.364 33.333 0.00 0.00 0.00 3.01
648 650 7.807977 TTCCAAATGATTATGACTTAGAGCC 57.192 36.000 0.00 0.00 0.00 4.70
649 651 6.899089 TCCAAATGATTATGACTTAGAGCCA 58.101 36.000 0.00 0.00 0.00 4.75
650 652 7.520798 TCCAAATGATTATGACTTAGAGCCAT 58.479 34.615 0.00 0.00 0.00 4.40
651 653 7.663081 TCCAAATGATTATGACTTAGAGCCATC 59.337 37.037 0.00 0.00 0.00 3.51
652 654 7.664731 CCAAATGATTATGACTTAGAGCCATCT 59.335 37.037 0.00 0.00 39.75 2.90
653 655 8.504815 CAAATGATTATGACTTAGAGCCATCTG 58.495 37.037 0.00 0.00 36.96 2.90
654 656 6.983906 TGATTATGACTTAGAGCCATCTGA 57.016 37.500 0.00 0.00 36.96 3.27
655 657 7.365497 TGATTATGACTTAGAGCCATCTGAA 57.635 36.000 0.00 0.00 36.96 3.02
656 658 7.795047 TGATTATGACTTAGAGCCATCTGAAA 58.205 34.615 0.00 0.00 36.96 2.69
657 659 8.435187 TGATTATGACTTAGAGCCATCTGAAAT 58.565 33.333 0.00 0.00 36.96 2.17
658 660 9.935241 GATTATGACTTAGAGCCATCTGAAATA 57.065 33.333 0.00 0.00 36.96 1.40
660 662 9.547753 TTATGACTTAGAGCCATCTGAAATAAC 57.452 33.333 0.00 0.00 36.96 1.89
661 663 6.349300 TGACTTAGAGCCATCTGAAATAACC 58.651 40.000 0.00 0.00 36.96 2.85
662 664 6.070251 TGACTTAGAGCCATCTGAAATAACCA 60.070 38.462 0.00 0.00 36.96 3.67
663 665 6.116126 ACTTAGAGCCATCTGAAATAACCAC 58.884 40.000 0.00 0.00 36.96 4.16
664 666 4.851639 AGAGCCATCTGAAATAACCACT 57.148 40.909 0.00 0.00 33.30 4.00
665 667 5.957771 AGAGCCATCTGAAATAACCACTA 57.042 39.130 0.00 0.00 33.30 2.74
666 668 6.506538 AGAGCCATCTGAAATAACCACTAT 57.493 37.500 0.00 0.00 33.30 2.12
667 669 6.904626 AGAGCCATCTGAAATAACCACTATT 58.095 36.000 0.00 0.00 33.30 1.73
668 670 8.034313 AGAGCCATCTGAAATAACCACTATTA 57.966 34.615 0.00 0.00 33.30 0.98
669 671 8.664079 AGAGCCATCTGAAATAACCACTATTAT 58.336 33.333 0.00 0.00 33.30 1.28
670 672 8.854614 AGCCATCTGAAATAACCACTATTATC 57.145 34.615 0.00 0.00 29.59 1.75
671 673 8.439971 AGCCATCTGAAATAACCACTATTATCA 58.560 33.333 0.00 0.00 29.59 2.15
672 674 9.066892 GCCATCTGAAATAACCACTATTATCAA 57.933 33.333 0.00 0.00 29.59 2.57
685 687 9.487790 ACCACTATTATCAATGGTTTTTGTTTG 57.512 29.630 0.00 0.00 42.98 2.93
686 688 9.703892 CCACTATTATCAATGGTTTTTGTTTGA 57.296 29.630 0.00 0.00 29.32 2.69
691 693 6.826893 ATCAATGGTTTTTGTTTGAAGACG 57.173 33.333 0.00 0.00 32.35 4.18
692 694 5.715070 TCAATGGTTTTTGTTTGAAGACGT 58.285 33.333 0.00 0.00 0.00 4.34
693 695 5.802956 TCAATGGTTTTTGTTTGAAGACGTC 59.197 36.000 7.70 7.70 0.00 4.34
694 696 5.576447 ATGGTTTTTGTTTGAAGACGTCT 57.424 34.783 13.58 13.58 0.00 4.18
695 697 6.687081 ATGGTTTTTGTTTGAAGACGTCTA 57.313 33.333 20.39 0.04 0.00 2.59
696 698 6.114221 TGGTTTTTGTTTGAAGACGTCTAG 57.886 37.500 20.39 0.00 0.00 2.43
697 699 5.875910 TGGTTTTTGTTTGAAGACGTCTAGA 59.124 36.000 20.39 5.33 0.00 2.43
698 700 6.372103 TGGTTTTTGTTTGAAGACGTCTAGAA 59.628 34.615 20.39 11.67 0.00 2.10
699 701 7.066525 TGGTTTTTGTTTGAAGACGTCTAGAAT 59.933 33.333 20.39 2.08 0.00 2.40
700 702 8.553696 GGTTTTTGTTTGAAGACGTCTAGAATA 58.446 33.333 20.39 9.37 0.00 1.75
701 703 9.925268 GTTTTTGTTTGAAGACGTCTAGAATAA 57.075 29.630 20.39 14.43 0.00 1.40
735 737 5.707242 TCGAAAGAGTGAGTCACAACTAT 57.293 39.130 24.73 3.73 36.74 2.12
736 738 5.461526 TCGAAAGAGTGAGTCACAACTATG 58.538 41.667 24.73 14.74 36.74 2.23
737 739 4.623167 CGAAAGAGTGAGTCACAACTATGG 59.377 45.833 24.73 11.35 36.74 2.74
738 740 3.601443 AGAGTGAGTCACAACTATGGC 57.399 47.619 24.73 4.15 36.74 4.40
739 741 2.899900 AGAGTGAGTCACAACTATGGCA 59.100 45.455 24.73 0.00 36.74 4.92
740 742 3.517100 AGAGTGAGTCACAACTATGGCAT 59.483 43.478 24.73 4.88 36.74 4.40
741 743 3.603532 AGTGAGTCACAACTATGGCATG 58.396 45.455 24.73 2.76 36.74 4.06
742 744 3.008375 AGTGAGTCACAACTATGGCATGT 59.992 43.478 24.73 3.44 36.74 3.21
743 745 4.222810 AGTGAGTCACAACTATGGCATGTA 59.777 41.667 24.73 0.00 36.74 2.29
744 746 4.935205 GTGAGTCACAACTATGGCATGTAA 59.065 41.667 18.54 0.00 35.28 2.41
745 747 4.935205 TGAGTCACAACTATGGCATGTAAC 59.065 41.667 10.98 0.00 35.28 2.50
746 748 4.905429 AGTCACAACTATGGCATGTAACA 58.095 39.130 10.98 0.00 32.59 2.41
747 749 5.312895 AGTCACAACTATGGCATGTAACAA 58.687 37.500 10.98 0.00 32.59 2.83
748 750 5.945784 AGTCACAACTATGGCATGTAACAAT 59.054 36.000 10.98 0.00 32.59 2.71
749 751 6.029607 GTCACAACTATGGCATGTAACAATG 58.970 40.000 10.98 4.12 0.00 2.82
750 752 5.942826 TCACAACTATGGCATGTAACAATGA 59.057 36.000 10.98 2.69 0.00 2.57
751 753 6.602803 TCACAACTATGGCATGTAACAATGAT 59.397 34.615 10.98 0.00 0.00 2.45
752 754 7.772757 TCACAACTATGGCATGTAACAATGATA 59.227 33.333 10.98 0.00 0.00 2.15
753 755 8.404765 CACAACTATGGCATGTAACAATGATAA 58.595 33.333 10.98 0.00 0.00 1.75
754 756 9.135189 ACAACTATGGCATGTAACAATGATAAT 57.865 29.630 10.98 0.00 0.00 1.28
755 757 9.970395 CAACTATGGCATGTAACAATGATAATT 57.030 29.630 10.98 0.00 0.00 1.40
759 761 6.980593 TGGCATGTAACAATGATAATTAGGC 58.019 36.000 0.00 0.00 0.00 3.93
760 762 6.086222 GGCATGTAACAATGATAATTAGGCG 58.914 40.000 0.00 0.00 0.00 5.52
761 763 5.569059 GCATGTAACAATGATAATTAGGCGC 59.431 40.000 0.00 0.00 0.00 6.53
762 764 6.667370 CATGTAACAATGATAATTAGGCGCA 58.333 36.000 10.83 0.00 0.00 6.09
763 765 6.299023 TGTAACAATGATAATTAGGCGCAG 57.701 37.500 10.83 0.00 0.00 5.18
796 798 4.457433 GCATTGGCTTTTGTTTGAAGAC 57.543 40.909 0.00 0.00 36.96 3.01
797 799 3.060339 GCATTGGCTTTTGTTTGAAGACG 60.060 43.478 0.00 0.00 34.80 4.18
798 800 3.859411 TTGGCTTTTGTTTGAAGACGT 57.141 38.095 0.00 0.00 34.80 4.34
799 801 3.414549 TGGCTTTTGTTTGAAGACGTC 57.585 42.857 7.70 7.70 34.80 4.34
800 802 3.013921 TGGCTTTTGTTTGAAGACGTCT 58.986 40.909 13.58 13.58 34.80 4.18
801 803 4.193090 TGGCTTTTGTTTGAAGACGTCTA 58.807 39.130 20.39 0.04 34.80 2.59
802 804 4.034742 TGGCTTTTGTTTGAAGACGTCTAC 59.965 41.667 20.39 13.81 34.80 2.59
803 805 4.034742 GGCTTTTGTTTGAAGACGTCTACA 59.965 41.667 20.39 16.44 0.00 2.74
804 806 5.448089 GGCTTTTGTTTGAAGACGTCTACAA 60.448 40.000 21.85 21.85 32.91 2.41
805 807 6.199393 GCTTTTGTTTGAAGACGTCTACAAT 58.801 36.000 24.71 9.50 34.02 2.71
806 808 7.349711 GCTTTTGTTTGAAGACGTCTACAATA 58.650 34.615 24.71 20.23 34.02 1.90
807 809 7.853929 GCTTTTGTTTGAAGACGTCTACAATAA 59.146 33.333 24.71 20.00 34.02 1.40
808 810 9.878599 CTTTTGTTTGAAGACGTCTACAATAAT 57.121 29.630 24.71 7.78 34.02 1.28
905 907 5.068234 TGATACCTACCACTTTTCTCGTG 57.932 43.478 0.00 0.00 0.00 4.35
1108 1115 0.324738 CCTCTCACTGTGCTCCCCTA 60.325 60.000 2.12 0.00 0.00 3.53
1694 1724 1.227943 GTTGTCCAGTGCAGCAGGA 60.228 57.895 0.00 0.00 0.00 3.86
1788 1818 7.247456 TCTGAACCCACACAGTATTATGTTA 57.753 36.000 0.00 0.00 35.84 2.41
2011 2041 6.741801 GCCTCACCTTTAGTTTCTTAGTCTGT 60.742 42.308 0.00 0.00 0.00 3.41
2243 2273 4.488879 GCCAAGCTTAAGACTGAAAATGG 58.511 43.478 6.67 8.12 0.00 3.16
2295 2325 6.115446 TGTCCAAGATGTATCCAAGATGTTC 58.885 40.000 0.00 0.00 0.00 3.18
2326 2356 0.043485 TGGTAGGGTAGGCCACATGA 59.957 55.000 5.01 0.00 36.17 3.07
2376 2406 9.877137 GAAGAATTTGAGAAGAAGAAGAAAGAC 57.123 33.333 0.00 0.00 0.00 3.01
2388 2418 5.890424 AGAAGAAAGACGTAGAAGAGAGG 57.110 43.478 0.00 0.00 0.00 3.69
2436 2466 2.544486 GCTCAAACTTGCCAAGGAACAG 60.544 50.000 9.64 0.81 0.00 3.16
3622 3659 6.012658 TCATAAATGCAAACACTCAGGTTC 57.987 37.500 0.00 0.00 0.00 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 44 0.676151 GCCTCTCCCAGCAGTTTCAG 60.676 60.000 0.00 0.00 0.00 3.02
71 73 2.503920 CCGGACACTTAACGGGATAG 57.496 55.000 0.00 0.00 43.69 2.08
84 86 5.566469 AGAAATGGAGTTAAATTCCGGACA 58.434 37.500 1.83 0.00 37.54 4.02
89 91 9.892130 TTCTCTCTAGAAATGGAGTTAAATTCC 57.108 33.333 6.62 1.19 38.81 3.01
104 106 5.515008 GCCTTTCCCCTTTTTCTCTCTAGAA 60.515 44.000 0.00 0.00 40.03 2.10
105 107 4.019231 GCCTTTCCCCTTTTTCTCTCTAGA 60.019 45.833 0.00 0.00 0.00 2.43
106 108 4.265893 GCCTTTCCCCTTTTTCTCTCTAG 58.734 47.826 0.00 0.00 0.00 2.43
107 109 3.307480 CGCCTTTCCCCTTTTTCTCTCTA 60.307 47.826 0.00 0.00 0.00 2.43
108 110 2.553247 CGCCTTTCCCCTTTTTCTCTCT 60.553 50.000 0.00 0.00 0.00 3.10
109 111 1.813178 CGCCTTTCCCCTTTTTCTCTC 59.187 52.381 0.00 0.00 0.00 3.20
110 112 1.145119 ACGCCTTTCCCCTTTTTCTCT 59.855 47.619 0.00 0.00 0.00 3.10
111 113 1.617322 ACGCCTTTCCCCTTTTTCTC 58.383 50.000 0.00 0.00 0.00 2.87
112 114 2.963599 TACGCCTTTCCCCTTTTTCT 57.036 45.000 0.00 0.00 0.00 2.52
113 115 2.230508 CCTTACGCCTTTCCCCTTTTTC 59.769 50.000 0.00 0.00 0.00 2.29
114 116 2.244695 CCTTACGCCTTTCCCCTTTTT 58.755 47.619 0.00 0.00 0.00 1.94
115 117 1.146359 ACCTTACGCCTTTCCCCTTTT 59.854 47.619 0.00 0.00 0.00 2.27
116 118 0.775542 ACCTTACGCCTTTCCCCTTT 59.224 50.000 0.00 0.00 0.00 3.11
117 119 1.558294 CTACCTTACGCCTTTCCCCTT 59.442 52.381 0.00 0.00 0.00 3.95
118 120 1.201424 CTACCTTACGCCTTTCCCCT 58.799 55.000 0.00 0.00 0.00 4.79
119 121 0.907486 ACTACCTTACGCCTTTCCCC 59.093 55.000 0.00 0.00 0.00 4.81
120 122 2.027837 TCAACTACCTTACGCCTTTCCC 60.028 50.000 0.00 0.00 0.00 3.97
121 123 3.323751 TCAACTACCTTACGCCTTTCC 57.676 47.619 0.00 0.00 0.00 3.13
122 124 4.436986 GCATTCAACTACCTTACGCCTTTC 60.437 45.833 0.00 0.00 0.00 2.62
123 125 3.439129 GCATTCAACTACCTTACGCCTTT 59.561 43.478 0.00 0.00 0.00 3.11
124 126 3.007635 GCATTCAACTACCTTACGCCTT 58.992 45.455 0.00 0.00 0.00 4.35
125 127 2.027561 TGCATTCAACTACCTTACGCCT 60.028 45.455 0.00 0.00 0.00 5.52
126 128 2.095372 GTGCATTCAACTACCTTACGCC 59.905 50.000 0.00 0.00 0.00 5.68
127 129 3.000727 AGTGCATTCAACTACCTTACGC 58.999 45.455 0.00 0.00 0.00 4.42
128 130 3.994392 ACAGTGCATTCAACTACCTTACG 59.006 43.478 0.00 0.00 0.00 3.18
129 131 7.333423 TGATTACAGTGCATTCAACTACCTTAC 59.667 37.037 0.00 0.00 0.00 2.34
130 132 7.390823 TGATTACAGTGCATTCAACTACCTTA 58.609 34.615 0.00 0.00 0.00 2.69
131 133 6.237901 TGATTACAGTGCATTCAACTACCTT 58.762 36.000 0.00 0.00 0.00 3.50
132 134 5.804639 TGATTACAGTGCATTCAACTACCT 58.195 37.500 0.00 0.00 0.00 3.08
133 135 6.111768 CTGATTACAGTGCATTCAACTACC 57.888 41.667 0.00 0.00 39.11 3.18
147 149 8.683550 TTATTACGAAGTCACACTGATTACAG 57.316 34.615 0.00 0.00 45.38 2.74
148 150 9.083080 CATTATTACGAAGTCACACTGATTACA 57.917 33.333 0.00 0.00 43.93 2.41
149 151 9.297586 TCATTATTACGAAGTCACACTGATTAC 57.702 33.333 0.00 0.00 43.93 1.89
150 152 9.863845 TTCATTATTACGAAGTCACACTGATTA 57.136 29.630 0.00 0.00 43.93 1.75
151 153 8.771920 TTCATTATTACGAAGTCACACTGATT 57.228 30.769 0.00 0.00 43.93 2.57
152 154 8.948631 ATTCATTATTACGAAGTCACACTGAT 57.051 30.769 0.00 0.00 43.93 2.90
153 155 8.251026 AGATTCATTATTACGAAGTCACACTGA 58.749 33.333 0.00 0.00 43.93 3.41
154 156 8.412608 AGATTCATTATTACGAAGTCACACTG 57.587 34.615 0.00 0.00 43.93 3.66
155 157 9.436957 AAAGATTCATTATTACGAAGTCACACT 57.563 29.630 0.00 0.00 43.93 3.55
156 158 9.690434 GAAAGATTCATTATTACGAAGTCACAC 57.310 33.333 0.00 0.00 43.93 3.82
157 159 9.653287 AGAAAGATTCATTATTACGAAGTCACA 57.347 29.630 0.00 0.00 43.93 3.58
162 164 8.820933 TGCAGAGAAAGATTCATTATTACGAAG 58.179 33.333 0.00 0.00 0.00 3.79
163 165 8.604035 GTGCAGAGAAAGATTCATTATTACGAA 58.396 33.333 0.00 0.00 0.00 3.85
164 166 7.224753 GGTGCAGAGAAAGATTCATTATTACGA 59.775 37.037 0.00 0.00 0.00 3.43
165 167 7.225538 AGGTGCAGAGAAAGATTCATTATTACG 59.774 37.037 0.00 0.00 0.00 3.18
166 168 8.443953 AGGTGCAGAGAAAGATTCATTATTAC 57.556 34.615 0.00 0.00 0.00 1.89
167 169 9.466497 AAAGGTGCAGAGAAAGATTCATTATTA 57.534 29.630 0.00 0.00 0.00 0.98
168 170 7.951347 AAGGTGCAGAGAAAGATTCATTATT 57.049 32.000 0.00 0.00 0.00 1.40
169 171 7.951347 AAAGGTGCAGAGAAAGATTCATTAT 57.049 32.000 0.00 0.00 0.00 1.28
170 172 8.103305 ACTAAAGGTGCAGAGAAAGATTCATTA 58.897 33.333 0.00 0.00 0.00 1.90
171 173 6.944862 ACTAAAGGTGCAGAGAAAGATTCATT 59.055 34.615 0.00 0.00 0.00 2.57
172 174 6.373774 CACTAAAGGTGCAGAGAAAGATTCAT 59.626 38.462 0.00 0.00 39.22 2.57
173 175 5.702670 CACTAAAGGTGCAGAGAAAGATTCA 59.297 40.000 0.00 0.00 39.22 2.57
174 176 6.175712 CACTAAAGGTGCAGAGAAAGATTC 57.824 41.667 0.00 0.00 39.22 2.52
197 199 4.282068 CAAACCGATAACACTGCATATGC 58.718 43.478 21.09 21.09 42.50 3.14
198 200 4.789481 GCCAAACCGATAACACTGCATATG 60.789 45.833 0.00 0.00 0.00 1.78
199 201 3.315191 GCCAAACCGATAACACTGCATAT 59.685 43.478 0.00 0.00 0.00 1.78
200 202 2.680841 GCCAAACCGATAACACTGCATA 59.319 45.455 0.00 0.00 0.00 3.14
201 203 1.472480 GCCAAACCGATAACACTGCAT 59.528 47.619 0.00 0.00 0.00 3.96
202 204 0.878416 GCCAAACCGATAACACTGCA 59.122 50.000 0.00 0.00 0.00 4.41
203 205 0.878416 TGCCAAACCGATAACACTGC 59.122 50.000 0.00 0.00 0.00 4.40
204 206 5.065859 TGAATATGCCAAACCGATAACACTG 59.934 40.000 0.00 0.00 0.00 3.66
205 207 5.189928 TGAATATGCCAAACCGATAACACT 58.810 37.500 0.00 0.00 0.00 3.55
206 208 5.493133 TGAATATGCCAAACCGATAACAC 57.507 39.130 0.00 0.00 0.00 3.32
207 209 7.882791 AGATATGAATATGCCAAACCGATAACA 59.117 33.333 0.00 0.00 0.00 2.41
208 210 8.268850 AGATATGAATATGCCAAACCGATAAC 57.731 34.615 0.00 0.00 0.00 1.89
209 211 9.378551 GTAGATATGAATATGCCAAACCGATAA 57.621 33.333 0.00 0.00 0.00 1.75
210 212 7.985184 GGTAGATATGAATATGCCAAACCGATA 59.015 37.037 0.00 0.00 0.00 2.92
211 213 6.823689 GGTAGATATGAATATGCCAAACCGAT 59.176 38.462 0.00 0.00 0.00 4.18
212 214 6.170506 GGTAGATATGAATATGCCAAACCGA 58.829 40.000 0.00 0.00 0.00 4.69
213 215 5.063438 CGGTAGATATGAATATGCCAAACCG 59.937 44.000 0.00 0.00 38.98 4.44
214 216 5.938125 ACGGTAGATATGAATATGCCAAACC 59.062 40.000 0.00 0.00 0.00 3.27
215 217 8.604035 CATACGGTAGATATGAATATGCCAAAC 58.396 37.037 0.00 0.00 32.66 2.93
216 218 8.318412 ACATACGGTAGATATGAATATGCCAAA 58.682 33.333 0.00 0.00 34.65 3.28
217 219 7.847096 ACATACGGTAGATATGAATATGCCAA 58.153 34.615 0.00 0.00 34.65 4.52
218 220 7.418337 ACATACGGTAGATATGAATATGCCA 57.582 36.000 0.00 0.00 34.65 4.92
219 221 6.637254 CGACATACGGTAGATATGAATATGCC 59.363 42.308 0.00 0.00 38.46 4.40
220 222 7.610397 CGACATACGGTAGATATGAATATGC 57.390 40.000 0.00 0.00 38.46 3.14
236 238 1.806511 ACAACGATCGACGACATACG 58.193 50.000 24.34 6.85 45.77 3.06
237 239 4.088923 TGAAAACAACGATCGACGACATAC 59.911 41.667 24.34 7.24 45.77 2.39
238 240 4.228317 TGAAAACAACGATCGACGACATA 58.772 39.130 24.34 0.00 45.77 2.29
239 241 3.054166 TGAAAACAACGATCGACGACAT 58.946 40.909 24.34 3.39 45.77 3.06
240 242 2.461903 TGAAAACAACGATCGACGACA 58.538 42.857 24.34 9.21 45.77 4.35
241 243 3.646303 GATGAAAACAACGATCGACGAC 58.354 45.455 24.34 6.76 45.77 4.34
242 244 2.340283 CGATGAAAACAACGATCGACGA 59.660 45.455 24.34 0.00 45.77 4.20
244 246 2.092211 AGCGATGAAAACAACGATCGAC 59.908 45.455 24.34 4.53 40.06 4.20
245 247 2.333926 AGCGATGAAAACAACGATCGA 58.666 42.857 24.34 0.00 40.06 3.59
246 248 2.787723 AGCGATGAAAACAACGATCG 57.212 45.000 14.88 14.88 40.50 3.69
247 249 3.534516 CGAAAGCGATGAAAACAACGATC 59.465 43.478 0.00 0.00 40.82 3.69
248 250 3.479006 CGAAAGCGATGAAAACAACGAT 58.521 40.909 0.00 0.00 40.82 3.73
249 251 2.349060 CCGAAAGCGATGAAAACAACGA 60.349 45.455 0.00 0.00 40.82 3.85
250 252 1.969256 CCGAAAGCGATGAAAACAACG 59.031 47.619 0.00 0.00 40.82 4.10
251 253 2.287368 ACCCGAAAGCGATGAAAACAAC 60.287 45.455 0.00 0.00 40.82 3.32
252 254 1.950909 ACCCGAAAGCGATGAAAACAA 59.049 42.857 0.00 0.00 40.82 2.83
253 255 1.600023 ACCCGAAAGCGATGAAAACA 58.400 45.000 0.00 0.00 40.82 2.83
254 256 2.699251 AACCCGAAAGCGATGAAAAC 57.301 45.000 0.00 0.00 40.82 2.43
255 257 3.719173 AAAACCCGAAAGCGATGAAAA 57.281 38.095 0.00 0.00 40.82 2.29
256 258 5.379732 AATAAAACCCGAAAGCGATGAAA 57.620 34.783 0.00 0.00 40.82 2.69
257 259 5.379732 AAATAAAACCCGAAAGCGATGAA 57.620 34.783 0.00 0.00 40.82 2.57
258 260 5.379732 AAAATAAAACCCGAAAGCGATGA 57.620 34.783 0.00 0.00 40.82 2.92
259 261 7.749539 ATAAAAATAAAACCCGAAAGCGATG 57.250 32.000 0.00 0.00 40.82 3.84
260 262 8.766000 AAATAAAAATAAAACCCGAAAGCGAT 57.234 26.923 0.00 0.00 40.82 4.58
261 263 8.590719 AAAATAAAAATAAAACCCGAAAGCGA 57.409 26.923 0.00 0.00 40.82 4.93
293 295 3.511934 AGAATGAAGCTATACCTAGGCGG 59.488 47.826 9.30 0.00 39.35 6.13
294 296 4.792521 AGAATGAAGCTATACCTAGGCG 57.207 45.455 9.30 0.00 0.00 5.52
295 297 6.102897 TCAAGAATGAAGCTATACCTAGGC 57.897 41.667 9.30 0.00 30.99 3.93
310 312 7.672738 GCAAATAGCAAAGTCATTCAAGAATG 58.327 34.615 14.98 14.98 44.98 2.67
311 313 7.823149 GCAAATAGCAAAGTCATTCAAGAAT 57.177 32.000 0.00 0.00 44.79 2.40
327 329 2.154462 AGTATCATGCCGGCAAATAGC 58.846 47.619 36.33 22.76 44.65 2.97
328 330 4.036734 ACAAAGTATCATGCCGGCAAATAG 59.963 41.667 36.33 22.88 0.00 1.73
329 331 3.951037 ACAAAGTATCATGCCGGCAAATA 59.049 39.130 36.33 28.62 0.00 1.40
330 332 2.760092 ACAAAGTATCATGCCGGCAAAT 59.240 40.909 36.33 29.70 0.00 2.32
331 333 2.094803 CACAAAGTATCATGCCGGCAAA 60.095 45.455 36.33 25.21 0.00 3.68
332 334 1.472082 CACAAAGTATCATGCCGGCAA 59.528 47.619 36.33 19.92 0.00 4.52
333 335 1.093972 CACAAAGTATCATGCCGGCA 58.906 50.000 34.80 34.80 0.00 5.69
334 336 1.094785 ACACAAAGTATCATGCCGGC 58.905 50.000 22.73 22.73 0.00 6.13
335 337 1.202177 GCACACAAAGTATCATGCCGG 60.202 52.381 0.00 0.00 0.00 6.13
336 338 1.529622 CGCACACAAAGTATCATGCCG 60.530 52.381 0.00 0.00 0.00 5.69
337 339 1.468520 ACGCACACAAAGTATCATGCC 59.531 47.619 0.00 0.00 0.00 4.40
338 340 2.095768 ACACGCACACAAAGTATCATGC 60.096 45.455 0.00 0.00 0.00 4.06
339 341 3.058983 ACACACGCACACAAAGTATCATG 60.059 43.478 0.00 0.00 0.00 3.07
340 342 3.138304 ACACACGCACACAAAGTATCAT 58.862 40.909 0.00 0.00 0.00 2.45
341 343 2.556257 ACACACGCACACAAAGTATCA 58.444 42.857 0.00 0.00 0.00 2.15
342 344 3.602390 AACACACGCACACAAAGTATC 57.398 42.857 0.00 0.00 0.00 2.24
343 345 3.375610 TGAAACACACGCACACAAAGTAT 59.624 39.130 0.00 0.00 0.00 2.12
344 346 2.742589 TGAAACACACGCACACAAAGTA 59.257 40.909 0.00 0.00 0.00 2.24
345 347 1.537638 TGAAACACACGCACACAAAGT 59.462 42.857 0.00 0.00 0.00 2.66
346 348 2.254918 TGAAACACACGCACACAAAG 57.745 45.000 0.00 0.00 0.00 2.77
347 349 2.095008 ACATGAAACACACGCACACAAA 60.095 40.909 0.00 0.00 0.00 2.83
348 350 1.470494 ACATGAAACACACGCACACAA 59.530 42.857 0.00 0.00 0.00 3.33
349 351 1.090728 ACATGAAACACACGCACACA 58.909 45.000 0.00 0.00 0.00 3.72
350 352 1.845568 CAACATGAAACACACGCACAC 59.154 47.619 0.00 0.00 0.00 3.82
351 353 1.202234 CCAACATGAAACACACGCACA 60.202 47.619 0.00 0.00 0.00 4.57
352 354 1.202245 ACCAACATGAAACACACGCAC 60.202 47.619 0.00 0.00 0.00 5.34
353 355 1.098869 ACCAACATGAAACACACGCA 58.901 45.000 0.00 0.00 0.00 5.24
354 356 1.851666 CAACCAACATGAAACACACGC 59.148 47.619 0.00 0.00 0.00 5.34
355 357 2.851235 CACAACCAACATGAAACACACG 59.149 45.455 0.00 0.00 0.00 4.49
356 358 3.611986 CACACAACCAACATGAAACACAC 59.388 43.478 0.00 0.00 0.00 3.82
357 359 3.256879 ACACACAACCAACATGAAACACA 59.743 39.130 0.00 0.00 0.00 3.72
358 360 3.843999 ACACACAACCAACATGAAACAC 58.156 40.909 0.00 0.00 0.00 3.32
359 361 5.358160 TGATACACACAACCAACATGAAACA 59.642 36.000 0.00 0.00 0.00 2.83
360 362 5.826586 TGATACACACAACCAACATGAAAC 58.173 37.500 0.00 0.00 0.00 2.78
361 363 6.647334 ATGATACACACAACCAACATGAAA 57.353 33.333 0.00 0.00 0.00 2.69
362 364 6.939730 ACTATGATACACACAACCAACATGAA 59.060 34.615 0.00 0.00 0.00 2.57
363 365 6.472016 ACTATGATACACACAACCAACATGA 58.528 36.000 0.00 0.00 0.00 3.07
364 366 6.741992 ACTATGATACACACAACCAACATG 57.258 37.500 0.00 0.00 0.00 3.21
365 367 8.892723 CATAACTATGATACACACAACCAACAT 58.107 33.333 0.00 0.00 35.75 2.71
366 368 7.148323 GCATAACTATGATACACACAACCAACA 60.148 37.037 0.77 0.00 35.75 3.33
367 369 7.148323 TGCATAACTATGATACACACAACCAAC 60.148 37.037 0.77 0.00 35.75 3.77
368 370 6.881602 TGCATAACTATGATACACACAACCAA 59.118 34.615 0.77 0.00 35.75 3.67
369 371 6.410540 TGCATAACTATGATACACACAACCA 58.589 36.000 0.77 0.00 35.75 3.67
370 372 6.761242 TCTGCATAACTATGATACACACAACC 59.239 38.462 0.77 0.00 35.75 3.77
371 373 7.042456 CCTCTGCATAACTATGATACACACAAC 60.042 40.741 0.77 0.00 35.75 3.32
372 374 6.986231 CCTCTGCATAACTATGATACACACAA 59.014 38.462 0.77 0.00 35.75 3.33
373 375 6.515832 CCTCTGCATAACTATGATACACACA 58.484 40.000 0.77 0.00 35.75 3.72
374 376 5.406780 GCCTCTGCATAACTATGATACACAC 59.593 44.000 0.77 0.00 35.75 3.82
375 377 5.511373 GGCCTCTGCATAACTATGATACACA 60.511 44.000 0.00 0.00 40.13 3.72
376 378 4.932200 GGCCTCTGCATAACTATGATACAC 59.068 45.833 0.00 0.00 40.13 2.90
377 379 4.321974 CGGCCTCTGCATAACTATGATACA 60.322 45.833 0.00 0.00 40.13 2.29
378 380 4.177026 CGGCCTCTGCATAACTATGATAC 58.823 47.826 0.00 0.00 40.13 2.24
379 381 3.195610 CCGGCCTCTGCATAACTATGATA 59.804 47.826 0.00 0.00 40.13 2.15
380 382 2.027745 CCGGCCTCTGCATAACTATGAT 60.028 50.000 0.00 0.00 40.13 2.45
381 383 1.344438 CCGGCCTCTGCATAACTATGA 59.656 52.381 0.00 0.00 40.13 2.15
382 384 1.344438 TCCGGCCTCTGCATAACTATG 59.656 52.381 0.00 0.00 40.13 2.23
383 385 1.717032 TCCGGCCTCTGCATAACTAT 58.283 50.000 0.00 0.00 40.13 2.12
384 386 1.344438 CATCCGGCCTCTGCATAACTA 59.656 52.381 0.00 0.00 40.13 2.24
385 387 0.107456 CATCCGGCCTCTGCATAACT 59.893 55.000 0.00 0.00 40.13 2.24
386 388 0.179045 ACATCCGGCCTCTGCATAAC 60.179 55.000 0.00 0.00 40.13 1.89
387 389 0.179048 CACATCCGGCCTCTGCATAA 60.179 55.000 0.00 0.00 40.13 1.90
388 390 1.337384 ACACATCCGGCCTCTGCATA 61.337 55.000 0.00 0.00 40.13 3.14
389 391 1.337384 TACACATCCGGCCTCTGCAT 61.337 55.000 0.00 0.00 40.13 3.96
390 392 1.987306 TACACATCCGGCCTCTGCA 60.987 57.895 0.00 0.00 40.13 4.41
391 393 1.521681 GTACACATCCGGCCTCTGC 60.522 63.158 0.00 0.00 0.00 4.26
392 394 0.103208 GAGTACACATCCGGCCTCTG 59.897 60.000 0.00 0.00 0.00 3.35
393 395 0.324368 TGAGTACACATCCGGCCTCT 60.324 55.000 0.00 0.00 0.00 3.69
394 396 0.179108 GTGAGTACACATCCGGCCTC 60.179 60.000 0.00 0.00 45.32 4.70
395 397 1.898154 GTGAGTACACATCCGGCCT 59.102 57.895 0.00 0.00 45.32 5.19
396 398 4.515404 GTGAGTACACATCCGGCC 57.485 61.111 0.00 0.00 45.32 6.13
404 406 6.501781 AGCGGTACAATTATAGTGAGTACAC 58.498 40.000 0.00 0.00 46.24 2.90
405 407 6.704289 AGCGGTACAATTATAGTGAGTACA 57.296 37.500 0.00 0.00 37.40 2.90
406 408 7.198390 TCAAGCGGTACAATTATAGTGAGTAC 58.802 38.462 0.00 0.00 35.51 2.73
407 409 7.337480 TCAAGCGGTACAATTATAGTGAGTA 57.663 36.000 0.00 0.00 0.00 2.59
408 410 6.216801 TCAAGCGGTACAATTATAGTGAGT 57.783 37.500 0.00 0.00 0.00 3.41
409 411 6.346919 GCATCAAGCGGTACAATTATAGTGAG 60.347 42.308 0.00 0.00 0.00 3.51
410 412 5.465390 GCATCAAGCGGTACAATTATAGTGA 59.535 40.000 0.00 0.00 0.00 3.41
411 413 5.679906 GCATCAAGCGGTACAATTATAGTG 58.320 41.667 0.00 0.00 0.00 2.74
412 414 5.924475 GCATCAAGCGGTACAATTATAGT 57.076 39.130 0.00 0.00 0.00 2.12
425 427 7.892196 ATTGACTCCAAATCTAGCATCAAGCG 61.892 42.308 0.00 0.00 41.43 4.68
426 428 4.194640 TGACTCCAAATCTAGCATCAAGC 58.805 43.478 0.00 0.00 46.19 4.01
427 429 6.939132 ATTGACTCCAAATCTAGCATCAAG 57.061 37.500 0.00 0.00 35.67 3.02
428 430 8.806429 TTTATTGACTCCAAATCTAGCATCAA 57.194 30.769 0.00 0.00 35.67 2.57
429 431 8.806429 TTTTATTGACTCCAAATCTAGCATCA 57.194 30.769 0.00 0.00 35.67 3.07
470 472 6.209026 ACTCTCCCTCTCCTGAGATATTTTT 58.791 40.000 0.00 0.00 42.73 1.94
471 473 5.787327 ACTCTCCCTCTCCTGAGATATTTT 58.213 41.667 0.00 0.00 42.73 1.82
472 474 5.417170 ACTCTCCCTCTCCTGAGATATTT 57.583 43.478 0.00 0.00 42.73 1.40
473 475 6.734918 ATACTCTCCCTCTCCTGAGATATT 57.265 41.667 0.00 0.00 42.73 1.28
474 476 7.203361 TCTATACTCTCCCTCTCCTGAGATAT 58.797 42.308 0.00 0.00 42.73 1.63
475 477 6.576360 TCTATACTCTCCCTCTCCTGAGATA 58.424 44.000 0.00 0.00 42.73 1.98
476 478 5.420455 TCTATACTCTCCCTCTCCTGAGAT 58.580 45.833 0.00 0.00 42.73 2.75
477 479 4.833672 TCTATACTCTCCCTCTCCTGAGA 58.166 47.826 0.00 0.00 42.73 3.27
478 480 5.576563 TTCTATACTCTCCCTCTCCTGAG 57.423 47.826 0.00 0.00 39.92 3.35
479 481 5.399267 GGTTTCTATACTCTCCCTCTCCTGA 60.399 48.000 0.00 0.00 0.00 3.86
480 482 4.830600 GGTTTCTATACTCTCCCTCTCCTG 59.169 50.000 0.00 0.00 0.00 3.86
481 483 4.140876 GGGTTTCTATACTCTCCCTCTCCT 60.141 50.000 0.00 0.00 32.89 3.69
482 484 4.140876 AGGGTTTCTATACTCTCCCTCTCC 60.141 50.000 0.00 0.00 40.96 3.71
483 485 5.069518 AGGGTTTCTATACTCTCCCTCTC 57.930 47.826 0.00 0.00 40.96 3.20
484 486 5.043281 TCAAGGGTTTCTATACTCTCCCTCT 60.043 44.000 0.00 0.00 43.62 3.69
485 487 5.069383 GTCAAGGGTTTCTATACTCTCCCTC 59.931 48.000 0.00 0.00 43.62 4.30
486 488 4.963628 GTCAAGGGTTTCTATACTCTCCCT 59.036 45.833 0.00 0.00 45.96 4.20
487 489 4.715297 TGTCAAGGGTTTCTATACTCTCCC 59.285 45.833 0.00 0.00 35.56 4.30
488 490 5.187186 TGTGTCAAGGGTTTCTATACTCTCC 59.813 44.000 0.00 0.00 0.00 3.71
489 491 6.153000 TCTGTGTCAAGGGTTTCTATACTCTC 59.847 42.308 0.00 0.00 0.00 3.20
490 492 6.017192 TCTGTGTCAAGGGTTTCTATACTCT 58.983 40.000 0.00 0.00 0.00 3.24
491 493 6.282199 TCTGTGTCAAGGGTTTCTATACTC 57.718 41.667 0.00 0.00 0.00 2.59
492 494 6.352222 CCATCTGTGTCAAGGGTTTCTATACT 60.352 42.308 0.00 0.00 0.00 2.12
493 495 5.817816 CCATCTGTGTCAAGGGTTTCTATAC 59.182 44.000 0.00 0.00 0.00 1.47
494 496 5.629133 GCCATCTGTGTCAAGGGTTTCTATA 60.629 44.000 0.00 0.00 0.00 1.31
495 497 4.848357 CCATCTGTGTCAAGGGTTTCTAT 58.152 43.478 0.00 0.00 0.00 1.98
496 498 3.559171 GCCATCTGTGTCAAGGGTTTCTA 60.559 47.826 0.00 0.00 0.00 2.10
497 499 2.815589 GCCATCTGTGTCAAGGGTTTCT 60.816 50.000 0.00 0.00 0.00 2.52
498 500 1.541588 GCCATCTGTGTCAAGGGTTTC 59.458 52.381 0.00 0.00 0.00 2.78
499 501 1.145738 AGCCATCTGTGTCAAGGGTTT 59.854 47.619 0.00 0.00 0.00 3.27
500 502 0.773644 AGCCATCTGTGTCAAGGGTT 59.226 50.000 0.00 0.00 0.00 4.11
501 503 0.326264 GAGCCATCTGTGTCAAGGGT 59.674 55.000 0.00 0.00 0.00 4.34
502 504 0.742281 CGAGCCATCTGTGTCAAGGG 60.742 60.000 0.00 0.00 0.00 3.95
503 505 0.742281 CCGAGCCATCTGTGTCAAGG 60.742 60.000 0.00 0.00 0.00 3.61
504 506 0.036952 ACCGAGCCATCTGTGTCAAG 60.037 55.000 0.00 0.00 0.00 3.02
505 507 1.262417 TACCGAGCCATCTGTGTCAA 58.738 50.000 0.00 0.00 0.00 3.18
506 508 1.067142 GTTACCGAGCCATCTGTGTCA 60.067 52.381 0.00 0.00 0.00 3.58
507 509 1.204941 AGTTACCGAGCCATCTGTGTC 59.795 52.381 0.00 0.00 0.00 3.67
508 510 1.204941 GAGTTACCGAGCCATCTGTGT 59.795 52.381 0.00 0.00 0.00 3.72
509 511 1.471676 GGAGTTACCGAGCCATCTGTG 60.472 57.143 0.00 0.00 0.00 3.66
510 512 0.824759 GGAGTTACCGAGCCATCTGT 59.175 55.000 0.00 0.00 0.00 3.41
511 513 0.824109 TGGAGTTACCGAGCCATCTG 59.176 55.000 0.00 0.00 42.61 2.90
512 514 1.794714 ATGGAGTTACCGAGCCATCT 58.205 50.000 0.00 0.00 42.61 2.90
513 515 2.484889 GAATGGAGTTACCGAGCCATC 58.515 52.381 0.00 0.00 40.09 3.51
514 516 1.141053 GGAATGGAGTTACCGAGCCAT 59.859 52.381 0.00 0.00 42.66 4.40
515 517 0.539986 GGAATGGAGTTACCGAGCCA 59.460 55.000 0.00 0.00 42.61 4.75
516 518 0.539986 TGGAATGGAGTTACCGAGCC 59.460 55.000 0.00 0.00 42.61 4.70
517 519 2.213499 CATGGAATGGAGTTACCGAGC 58.787 52.381 0.00 0.00 41.79 5.03
518 520 2.213499 GCATGGAATGGAGTTACCGAG 58.787 52.381 0.00 0.00 46.86 4.63
519 521 1.472552 CGCATGGAATGGAGTTACCGA 60.473 52.381 0.00 0.00 46.86 4.69
520 522 0.937304 CGCATGGAATGGAGTTACCG 59.063 55.000 0.00 0.00 46.86 4.02
521 523 1.308998 CCGCATGGAATGGAGTTACC 58.691 55.000 0.00 0.00 46.86 2.85
522 524 2.038387 ACCGCATGGAATGGAGTTAC 57.962 50.000 0.00 0.00 46.86 2.50
523 525 2.799126 AACCGCATGGAATGGAGTTA 57.201 45.000 0.00 0.00 46.86 2.24
524 526 1.818674 GAAACCGCATGGAATGGAGTT 59.181 47.619 0.00 0.00 46.86 3.01
525 527 1.463674 GAAACCGCATGGAATGGAGT 58.536 50.000 0.00 0.00 46.86 3.85
526 528 0.740737 GGAAACCGCATGGAATGGAG 59.259 55.000 0.00 0.00 46.86 3.86
527 529 0.682855 GGGAAACCGCATGGAATGGA 60.683 55.000 0.00 0.00 43.56 3.41
528 530 1.815866 GGGAAACCGCATGGAATGG 59.184 57.895 0.00 0.00 43.56 3.16
540 542 0.534203 TCGCACACAGGAAGGGAAAC 60.534 55.000 0.00 0.00 0.00 2.78
541 543 0.181587 TTCGCACACAGGAAGGGAAA 59.818 50.000 0.00 0.00 32.33 3.13
542 544 0.181587 TTTCGCACACAGGAAGGGAA 59.818 50.000 0.00 0.00 33.23 3.97
543 545 0.181587 TTTTCGCACACAGGAAGGGA 59.818 50.000 0.00 0.00 0.00 4.20
544 546 0.593128 CTTTTCGCACACAGGAAGGG 59.407 55.000 0.00 0.00 0.00 3.95
545 547 0.593128 CCTTTTCGCACACAGGAAGG 59.407 55.000 0.00 0.00 0.00 3.46
546 548 0.593128 CCCTTTTCGCACACAGGAAG 59.407 55.000 0.00 0.00 0.00 3.46
547 549 0.181587 TCCCTTTTCGCACACAGGAA 59.818 50.000 0.00 0.00 0.00 3.36
548 550 0.250295 CTCCCTTTTCGCACACAGGA 60.250 55.000 0.00 0.00 0.00 3.86
549 551 1.856265 GCTCCCTTTTCGCACACAGG 61.856 60.000 0.00 0.00 0.00 4.00
550 552 1.165907 TGCTCCCTTTTCGCACACAG 61.166 55.000 0.00 0.00 0.00 3.66
551 553 0.537143 ATGCTCCCTTTTCGCACACA 60.537 50.000 0.00 0.00 36.37 3.72
552 554 0.109597 CATGCTCCCTTTTCGCACAC 60.110 55.000 0.00 0.00 36.37 3.82
553 555 0.537143 ACATGCTCCCTTTTCGCACA 60.537 50.000 0.00 0.00 36.37 4.57
554 556 0.109597 CACATGCTCCCTTTTCGCAC 60.110 55.000 0.00 0.00 36.37 5.34
555 557 0.250684 TCACATGCTCCCTTTTCGCA 60.251 50.000 0.00 0.00 38.14 5.10
556 558 1.098050 ATCACATGCTCCCTTTTCGC 58.902 50.000 0.00 0.00 0.00 4.70
557 559 1.402968 CCATCACATGCTCCCTTTTCG 59.597 52.381 0.00 0.00 0.00 3.46
558 560 1.135721 GCCATCACATGCTCCCTTTTC 59.864 52.381 0.00 0.00 0.00 2.29
559 561 1.188863 GCCATCACATGCTCCCTTTT 58.811 50.000 0.00 0.00 0.00 2.27
560 562 0.685458 GGCCATCACATGCTCCCTTT 60.685 55.000 0.00 0.00 0.00 3.11
561 563 1.076485 GGCCATCACATGCTCCCTT 60.076 57.895 0.00 0.00 0.00 3.95
562 564 1.652187 ATGGCCATCACATGCTCCCT 61.652 55.000 14.09 0.00 0.00 4.20
563 565 0.757935 AATGGCCATCACATGCTCCC 60.758 55.000 21.08 0.00 0.00 4.30
564 566 1.884579 CTAATGGCCATCACATGCTCC 59.115 52.381 21.08 0.00 0.00 4.70
565 567 2.292569 CACTAATGGCCATCACATGCTC 59.707 50.000 21.08 0.00 0.00 4.26
566 568 2.304092 CACTAATGGCCATCACATGCT 58.696 47.619 21.08 3.53 0.00 3.79
567 569 2.026641 ACACTAATGGCCATCACATGC 58.973 47.619 21.08 0.00 0.00 4.06
568 570 4.724074 AAACACTAATGGCCATCACATG 57.276 40.909 21.08 16.93 0.00 3.21
569 571 5.245751 TCAAAAACACTAATGGCCATCACAT 59.754 36.000 21.08 5.68 0.00 3.21
570 572 4.586421 TCAAAAACACTAATGGCCATCACA 59.414 37.500 21.08 6.58 0.00 3.58
571 573 5.132897 TCAAAAACACTAATGGCCATCAC 57.867 39.130 21.08 0.00 0.00 3.06
572 574 5.337410 CCATCAAAAACACTAATGGCCATCA 60.337 40.000 21.08 2.50 31.24 3.07
573 575 5.111293 CCATCAAAAACACTAATGGCCATC 58.889 41.667 21.08 0.00 31.24 3.51
574 576 5.088680 CCATCAAAAACACTAATGGCCAT 57.911 39.130 14.09 14.09 31.24 4.40
575 577 4.533919 CCATCAAAAACACTAATGGCCA 57.466 40.909 8.56 8.56 31.24 5.36
578 580 4.155826 TCGAGCCATCAAAAACACTAATGG 59.844 41.667 0.00 0.00 39.90 3.16
579 581 5.295431 TCGAGCCATCAAAAACACTAATG 57.705 39.130 0.00 0.00 0.00 1.90
580 582 5.957842 TTCGAGCCATCAAAAACACTAAT 57.042 34.783 0.00 0.00 0.00 1.73
581 583 5.759506 TTTCGAGCCATCAAAAACACTAA 57.240 34.783 0.00 0.00 0.00 2.24
582 584 5.759506 TTTTCGAGCCATCAAAAACACTA 57.240 34.783 0.00 0.00 0.00 2.74
583 585 4.647424 TTTTCGAGCCATCAAAAACACT 57.353 36.364 0.00 0.00 0.00 3.55
584 586 5.234116 ACAATTTTCGAGCCATCAAAAACAC 59.766 36.000 0.00 0.00 0.00 3.32
585 587 5.355596 ACAATTTTCGAGCCATCAAAAACA 58.644 33.333 0.00 0.00 0.00 2.83
586 588 5.691754 AGACAATTTTCGAGCCATCAAAAAC 59.308 36.000 0.00 0.00 0.00 2.43
587 589 5.841810 AGACAATTTTCGAGCCATCAAAAA 58.158 33.333 0.00 0.00 0.00 1.94
588 590 5.241506 AGAGACAATTTTCGAGCCATCAAAA 59.758 36.000 0.00 0.00 0.00 2.44
589 591 4.761739 AGAGACAATTTTCGAGCCATCAAA 59.238 37.500 0.00 0.00 0.00 2.69
590 592 4.154737 CAGAGACAATTTTCGAGCCATCAA 59.845 41.667 0.00 0.00 0.00 2.57
591 593 3.686241 CAGAGACAATTTTCGAGCCATCA 59.314 43.478 0.00 0.00 0.00 3.07
592 594 3.935203 TCAGAGACAATTTTCGAGCCATC 59.065 43.478 0.00 0.00 0.00 3.51
593 595 3.942829 TCAGAGACAATTTTCGAGCCAT 58.057 40.909 0.00 0.00 0.00 4.40
594 596 3.401033 TCAGAGACAATTTTCGAGCCA 57.599 42.857 0.00 0.00 0.00 4.75
595 597 3.120165 GGTTCAGAGACAATTTTCGAGCC 60.120 47.826 0.00 0.00 0.00 4.70
596 598 3.748568 AGGTTCAGAGACAATTTTCGAGC 59.251 43.478 0.00 0.00 0.00 5.03
597 599 4.377841 GCAGGTTCAGAGACAATTTTCGAG 60.378 45.833 0.00 0.00 0.00 4.04
598 600 3.498397 GCAGGTTCAGAGACAATTTTCGA 59.502 43.478 0.00 0.00 0.00 3.71
599 601 3.499918 AGCAGGTTCAGAGACAATTTTCG 59.500 43.478 0.00 0.00 0.00 3.46
600 602 5.444663 AAGCAGGTTCAGAGACAATTTTC 57.555 39.130 0.00 0.00 0.00 2.29
601 603 7.309438 GGAATAAGCAGGTTCAGAGACAATTTT 60.309 37.037 0.00 0.00 0.00 1.82
602 604 6.151817 GGAATAAGCAGGTTCAGAGACAATTT 59.848 38.462 0.00 0.00 0.00 1.82
603 605 5.649831 GGAATAAGCAGGTTCAGAGACAATT 59.350 40.000 0.00 0.00 0.00 2.32
604 606 5.189180 GGAATAAGCAGGTTCAGAGACAAT 58.811 41.667 0.00 0.00 0.00 2.71
605 607 4.041567 TGGAATAAGCAGGTTCAGAGACAA 59.958 41.667 0.00 0.00 0.00 3.18
606 608 3.582647 TGGAATAAGCAGGTTCAGAGACA 59.417 43.478 0.00 0.00 0.00 3.41
607 609 4.207891 TGGAATAAGCAGGTTCAGAGAC 57.792 45.455 0.00 0.00 0.00 3.36
608 610 4.908601 TTGGAATAAGCAGGTTCAGAGA 57.091 40.909 0.00 0.00 0.00 3.10
609 611 5.649395 TCATTTGGAATAAGCAGGTTCAGAG 59.351 40.000 0.00 0.00 0.00 3.35
610 612 5.569355 TCATTTGGAATAAGCAGGTTCAGA 58.431 37.500 0.00 0.00 0.00 3.27
611 613 5.902613 TCATTTGGAATAAGCAGGTTCAG 57.097 39.130 0.00 0.00 0.00 3.02
612 614 6.855763 AATCATTTGGAATAAGCAGGTTCA 57.144 33.333 0.00 0.00 0.00 3.18
613 615 8.632679 TCATAATCATTTGGAATAAGCAGGTTC 58.367 33.333 0.00 0.00 0.00 3.62
614 616 8.416329 GTCATAATCATTTGGAATAAGCAGGTT 58.584 33.333 0.00 0.00 0.00 3.50
615 617 7.781693 AGTCATAATCATTTGGAATAAGCAGGT 59.218 33.333 0.00 0.00 0.00 4.00
616 618 8.174733 AGTCATAATCATTTGGAATAAGCAGG 57.825 34.615 0.00 0.00 0.00 4.85
622 624 9.507329 GGCTCTAAGTCATAATCATTTGGAATA 57.493 33.333 0.00 0.00 0.00 1.75
623 625 8.000709 TGGCTCTAAGTCATAATCATTTGGAAT 58.999 33.333 0.00 0.00 0.00 3.01
624 626 7.345691 TGGCTCTAAGTCATAATCATTTGGAA 58.654 34.615 0.00 0.00 0.00 3.53
625 627 6.899089 TGGCTCTAAGTCATAATCATTTGGA 58.101 36.000 0.00 0.00 0.00 3.53
626 628 7.664731 AGATGGCTCTAAGTCATAATCATTTGG 59.335 37.037 0.00 0.00 41.28 3.28
627 629 8.504815 CAGATGGCTCTAAGTCATAATCATTTG 58.495 37.037 0.00 0.00 41.28 2.32
628 630 8.435187 TCAGATGGCTCTAAGTCATAATCATTT 58.565 33.333 0.00 0.00 41.28 2.32
629 631 7.971201 TCAGATGGCTCTAAGTCATAATCATT 58.029 34.615 0.00 0.00 41.28 2.57
630 632 7.550597 TCAGATGGCTCTAAGTCATAATCAT 57.449 36.000 0.00 0.00 41.28 2.45
631 633 6.983906 TCAGATGGCTCTAAGTCATAATCA 57.016 37.500 0.00 0.00 41.28 2.57
632 634 8.845413 ATTTCAGATGGCTCTAAGTCATAATC 57.155 34.615 0.00 0.00 41.28 1.75
634 636 9.547753 GTTATTTCAGATGGCTCTAAGTCATAA 57.452 33.333 0.00 0.00 41.28 1.90
635 637 8.150945 GGTTATTTCAGATGGCTCTAAGTCATA 58.849 37.037 0.00 0.00 41.28 2.15
636 638 6.995091 GGTTATTTCAGATGGCTCTAAGTCAT 59.005 38.462 0.00 0.00 44.40 3.06
637 639 6.070251 TGGTTATTTCAGATGGCTCTAAGTCA 60.070 38.462 0.00 0.00 32.55 3.41
638 640 6.258947 GTGGTTATTTCAGATGGCTCTAAGTC 59.741 42.308 0.00 0.00 0.00 3.01
639 641 6.069963 AGTGGTTATTTCAGATGGCTCTAAGT 60.070 38.462 0.00 0.00 0.00 2.24
640 642 6.352516 AGTGGTTATTTCAGATGGCTCTAAG 58.647 40.000 0.00 0.00 0.00 2.18
641 643 6.313519 AGTGGTTATTTCAGATGGCTCTAA 57.686 37.500 0.00 0.00 0.00 2.10
642 644 5.957771 AGTGGTTATTTCAGATGGCTCTA 57.042 39.130 0.00 0.00 0.00 2.43
643 645 4.851639 AGTGGTTATTTCAGATGGCTCT 57.148 40.909 0.00 0.00 0.00 4.09
644 646 8.854614 ATAATAGTGGTTATTTCAGATGGCTC 57.145 34.615 0.00 0.00 33.96 4.70
645 647 8.439971 TGATAATAGTGGTTATTTCAGATGGCT 58.560 33.333 0.00 0.00 33.96 4.75
646 648 8.621532 TGATAATAGTGGTTATTTCAGATGGC 57.378 34.615 0.00 0.00 33.96 4.40
659 661 9.487790 CAAACAAAAACCATTGATAATAGTGGT 57.512 29.630 0.00 0.00 46.41 4.16
660 662 9.703892 TCAAACAAAAACCATTGATAATAGTGG 57.296 29.630 0.00 0.00 37.74 4.00
665 667 8.977505 CGTCTTCAAACAAAAACCATTGATAAT 58.022 29.630 0.00 0.00 32.35 1.28
666 668 7.976734 ACGTCTTCAAACAAAAACCATTGATAA 59.023 29.630 0.00 0.00 32.35 1.75
667 669 7.484975 ACGTCTTCAAACAAAAACCATTGATA 58.515 30.769 0.00 0.00 32.35 2.15
668 670 6.337356 ACGTCTTCAAACAAAAACCATTGAT 58.663 32.000 0.00 0.00 32.35 2.57
669 671 5.715070 ACGTCTTCAAACAAAAACCATTGA 58.285 33.333 0.00 0.00 34.38 2.57
670 672 5.804979 AGACGTCTTCAAACAAAAACCATTG 59.195 36.000 13.58 0.00 36.37 2.82
671 673 5.961272 AGACGTCTTCAAACAAAAACCATT 58.039 33.333 13.58 0.00 0.00 3.16
672 674 5.576447 AGACGTCTTCAAACAAAAACCAT 57.424 34.783 13.58 0.00 0.00 3.55
673 675 5.875910 TCTAGACGTCTTCAAACAAAAACCA 59.124 36.000 25.44 0.00 0.00 3.67
674 676 6.354039 TCTAGACGTCTTCAAACAAAAACC 57.646 37.500 25.44 0.00 0.00 3.27
675 677 9.925268 TTATTCTAGACGTCTTCAAACAAAAAC 57.075 29.630 25.44 0.00 0.00 2.43
700 702 9.823647 ACTCACTCTTTCGATACAATGATAATT 57.176 29.630 0.00 0.00 0.00 1.40
701 703 9.469807 GACTCACTCTTTCGATACAATGATAAT 57.530 33.333 0.00 0.00 0.00 1.28
702 704 8.466798 TGACTCACTCTTTCGATACAATGATAA 58.533 33.333 0.00 0.00 0.00 1.75
703 705 7.915923 GTGACTCACTCTTTCGATACAATGATA 59.084 37.037 1.58 0.00 0.00 2.15
704 706 6.754209 GTGACTCACTCTTTCGATACAATGAT 59.246 38.462 1.58 0.00 0.00 2.45
705 707 6.093404 GTGACTCACTCTTTCGATACAATGA 58.907 40.000 1.58 0.00 0.00 2.57
706 708 5.863935 TGTGACTCACTCTTTCGATACAATG 59.136 40.000 10.54 0.00 35.11 2.82
707 709 6.025749 TGTGACTCACTCTTTCGATACAAT 57.974 37.500 10.54 0.00 35.11 2.71
708 710 5.447624 TGTGACTCACTCTTTCGATACAA 57.552 39.130 10.54 0.00 35.11 2.41
709 711 5.009710 AGTTGTGACTCACTCTTTCGATACA 59.990 40.000 10.54 0.00 35.11 2.29
710 712 5.462405 AGTTGTGACTCACTCTTTCGATAC 58.538 41.667 10.54 0.00 35.11 2.24
711 713 5.707242 AGTTGTGACTCACTCTTTCGATA 57.293 39.130 10.54 0.00 35.11 2.92
712 714 4.592485 AGTTGTGACTCACTCTTTCGAT 57.408 40.909 10.54 0.00 35.11 3.59
713 715 5.461526 CATAGTTGTGACTCACTCTTTCGA 58.538 41.667 10.54 0.00 37.33 3.71
714 716 4.623167 CCATAGTTGTGACTCACTCTTTCG 59.377 45.833 10.54 0.00 37.33 3.46
715 717 4.390297 GCCATAGTTGTGACTCACTCTTTC 59.610 45.833 10.54 0.00 37.33 2.62
716 718 4.202357 TGCCATAGTTGTGACTCACTCTTT 60.202 41.667 10.54 2.47 37.33 2.52
717 719 3.324846 TGCCATAGTTGTGACTCACTCTT 59.675 43.478 10.54 0.00 37.33 2.85
718 720 2.899900 TGCCATAGTTGTGACTCACTCT 59.100 45.455 10.54 10.58 37.33 3.24
719 721 3.319137 TGCCATAGTTGTGACTCACTC 57.681 47.619 10.54 4.22 37.33 3.51
720 722 3.008375 ACATGCCATAGTTGTGACTCACT 59.992 43.478 10.54 0.00 37.33 3.41
721 723 3.338249 ACATGCCATAGTTGTGACTCAC 58.662 45.455 1.86 1.86 37.33 3.51
722 724 3.701205 ACATGCCATAGTTGTGACTCA 57.299 42.857 0.00 0.00 37.33 3.41
723 725 4.935205 TGTTACATGCCATAGTTGTGACTC 59.065 41.667 0.00 0.00 37.33 3.36
724 726 4.905429 TGTTACATGCCATAGTTGTGACT 58.095 39.130 0.00 0.00 39.97 3.41
725 727 5.621197 TTGTTACATGCCATAGTTGTGAC 57.379 39.130 0.00 0.00 32.34 3.67
726 728 5.942826 TCATTGTTACATGCCATAGTTGTGA 59.057 36.000 0.00 0.00 0.00 3.58
727 729 6.193514 TCATTGTTACATGCCATAGTTGTG 57.806 37.500 0.00 0.00 0.00 3.33
728 730 8.518430 TTATCATTGTTACATGCCATAGTTGT 57.482 30.769 0.00 0.00 0.00 3.32
729 731 9.970395 AATTATCATTGTTACATGCCATAGTTG 57.030 29.630 0.00 0.00 0.00 3.16
733 735 8.739039 GCCTAATTATCATTGTTACATGCCATA 58.261 33.333 0.00 0.00 0.00 2.74
734 736 7.575532 CGCCTAATTATCATTGTTACATGCCAT 60.576 37.037 0.00 0.00 0.00 4.40
735 737 6.293900 CGCCTAATTATCATTGTTACATGCCA 60.294 38.462 0.00 0.00 0.00 4.92
736 738 6.086222 CGCCTAATTATCATTGTTACATGCC 58.914 40.000 0.00 0.00 0.00 4.40
737 739 5.569059 GCGCCTAATTATCATTGTTACATGC 59.431 40.000 0.00 0.00 0.00 4.06
738 740 6.667370 TGCGCCTAATTATCATTGTTACATG 58.333 36.000 4.18 0.00 0.00 3.21
739 741 6.568462 GCTGCGCCTAATTATCATTGTTACAT 60.568 38.462 4.18 0.00 0.00 2.29
740 742 5.277779 GCTGCGCCTAATTATCATTGTTACA 60.278 40.000 4.18 0.00 0.00 2.41
741 743 5.147162 GCTGCGCCTAATTATCATTGTTAC 58.853 41.667 4.18 0.00 0.00 2.50
742 744 4.215399 GGCTGCGCCTAATTATCATTGTTA 59.785 41.667 4.18 0.00 46.69 2.41
743 745 3.004734 GGCTGCGCCTAATTATCATTGTT 59.995 43.478 4.18 0.00 46.69 2.83
744 746 2.554032 GGCTGCGCCTAATTATCATTGT 59.446 45.455 4.18 0.00 46.69 2.71
745 747 3.207474 GGCTGCGCCTAATTATCATTG 57.793 47.619 4.18 0.00 46.69 2.82
764 766 3.762247 CCAATGCTTGGCCCGTGG 61.762 66.667 0.00 0.00 45.17 4.94
775 777 3.060339 CGTCTTCAAACAAAAGCCAATGC 60.060 43.478 0.00 0.00 37.95 3.56
776 778 4.111916 ACGTCTTCAAACAAAAGCCAATG 58.888 39.130 0.00 0.00 0.00 2.82
777 779 4.097892 AGACGTCTTCAAACAAAAGCCAAT 59.902 37.500 13.58 0.00 0.00 3.16
778 780 3.442273 AGACGTCTTCAAACAAAAGCCAA 59.558 39.130 13.58 0.00 0.00 4.52
779 781 3.013921 AGACGTCTTCAAACAAAAGCCA 58.986 40.909 13.58 0.00 0.00 4.75
780 782 3.692791 AGACGTCTTCAAACAAAAGCC 57.307 42.857 13.58 0.00 0.00 4.35
781 783 5.151632 TGTAGACGTCTTCAAACAAAAGC 57.848 39.130 25.44 0.00 0.00 3.51
782 784 9.878599 ATTATTGTAGACGTCTTCAAACAAAAG 57.121 29.630 32.33 0.00 36.94 2.27
787 789 9.831054 CGATAATTATTGTAGACGTCTTCAAAC 57.169 33.333 32.33 21.58 36.94 2.93
788 790 9.791820 TCGATAATTATTGTAGACGTCTTCAAA 57.208 29.630 32.33 21.59 36.94 2.69
789 791 9.447040 CTCGATAATTATTGTAGACGTCTTCAA 57.553 33.333 31.31 31.31 37.59 2.69
790 792 8.618677 ACTCGATAATTATTGTAGACGTCTTCA 58.381 33.333 25.44 22.18 0.00 3.02
931 933 1.974000 GGTTTAAAACGCTAGCAACGC 59.026 47.619 16.45 1.54 0.00 4.84
1108 1115 1.599047 CAGAGGAATGAGTGCGGGT 59.401 57.895 0.00 0.00 0.00 5.28
1441 1471 2.646297 AGAACCCTAACCCAAACCCTAC 59.354 50.000 0.00 0.00 0.00 3.18
1641 1671 5.241728 CCTTCCAGTTAAGGTTCCTTCAAAG 59.758 44.000 7.41 4.63 41.06 2.77
1671 1701 1.202867 TGCTGCACTGGACAACCATAA 60.203 47.619 0.00 0.00 45.87 1.90
1788 1818 3.891049 AGGTTCAGAAGAGCAACTTGTT 58.109 40.909 1.06 0.00 39.13 2.83
2295 2325 0.250467 CCCTACCATCCTGCCAATCG 60.250 60.000 0.00 0.00 0.00 3.34
2326 2356 3.330701 TCCTCAACTGCCTTCTGGTTATT 59.669 43.478 0.00 0.00 35.27 1.40
2376 2406 2.351706 ACCTAGCCCTCTCTTCTACG 57.648 55.000 0.00 0.00 0.00 3.51
2388 2418 1.276622 TCTGAACCTCCAACCTAGCC 58.723 55.000 0.00 0.00 0.00 3.93
2436 2466 4.378874 GCTTGACTCTGTAAAATGCACCTC 60.379 45.833 0.00 0.00 0.00 3.85
2475 2505 1.499007 TCCTTCTTTGCCTTCCTGGTT 59.501 47.619 0.00 0.00 38.35 3.67
2806 2836 3.814842 CAGGCAGAACAGTCATTACAACA 59.185 43.478 0.00 0.00 0.00 3.33
3241 3273 2.429930 CCGCCAGGGACAAGAACA 59.570 61.111 0.00 0.00 38.47 3.18
3263 3295 1.209019 GATCTTCCCTGAGCTCTTGCA 59.791 52.381 16.19 0.00 42.74 4.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.