Multiple sequence alignment - TraesCS3D01G472500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G472500 chr3D 100.000 3014 0 0 1 3014 574486135 574483122 0.000000e+00 5566.0
1 TraesCS3D01G472500 chr3D 75.367 1295 243 47 999 2273 574114505 574115743 3.390000e-154 555.0
2 TraesCS3D01G472500 chr3D 73.649 1184 256 31 1001 2167 574062101 574063245 1.010000e-109 407.0
3 TraesCS3D01G472500 chr3D 80.952 252 25 19 249 493 574443018 574442783 8.590000e-41 178.0
4 TraesCS3D01G472500 chr3A 92.757 1353 87 5 989 2337 709776529 709775184 0.000000e+00 1945.0
5 TraesCS3D01G472500 chr3A 92.636 1290 86 3 1050 2337 709692734 709691452 0.000000e+00 1847.0
6 TraesCS3D01G472500 chr3A 89.355 1503 105 26 989 2476 709599769 709598307 0.000000e+00 1838.0
7 TraesCS3D01G472500 chr3A 92.127 597 47 0 1610 2206 709590937 709590341 0.000000e+00 843.0
8 TraesCS3D01G472500 chr3A 88.264 409 40 5 2194 2600 709590315 709589913 1.620000e-132 483.0
9 TraesCS3D01G472500 chr3A 86.239 327 17 12 252 573 709695112 709694809 2.240000e-86 329.0
10 TraesCS3D01G472500 chr3A 86.018 329 14 14 252 575 709780357 709780056 1.040000e-84 324.0
11 TraesCS3D01G472500 chr3A 89.272 261 13 4 1 257 709697668 709697419 2.260000e-81 313.0
12 TraesCS3D01G472500 chr3A 89.328 253 14 5 7 257 709781249 709781008 3.770000e-79 305.0
13 TraesCS3D01G472500 chr3A 82.927 287 24 9 680 950 709693152 709692875 5.020000e-58 235.0
14 TraesCS3D01G472500 chr3A 81.290 155 7 11 814 950 709776813 709776663 4.110000e-19 106.0
15 TraesCS3D01G472500 chr3B 89.097 1385 110 19 1101 2476 764178729 764180081 0.000000e+00 1683.0
16 TraesCS3D01G472500 chr3B 94.413 895 50 0 989 1883 764349741 764350635 0.000000e+00 1376.0
17 TraesCS3D01G472500 chr3B 88.318 428 39 11 2057 2476 764358061 764358485 1.250000e-138 503.0
18 TraesCS3D01G472500 chr3B 88.630 343 26 4 1241 1576 764343723 764344059 3.620000e-109 405.0
19 TraesCS3D01G472500 chr3B 93.077 260 15 1 1 257 764237296 764237555 7.890000e-101 377.0
20 TraesCS3D01G472500 chr3B 86.301 365 29 7 1922 2286 764344060 764344403 7.890000e-101 377.0
21 TraesCS3D01G472500 chr3B 88.476 269 17 10 297 555 764178207 764178471 2.260000e-81 313.0
22 TraesCS3D01G472500 chr3B 91.630 227 13 4 303 526 764240147 764240370 2.920000e-80 309.0
23 TraesCS3D01G472500 chr3B 85.992 257 20 6 990 1246 764341663 764341903 8.290000e-66 261.0
24 TraesCS3D01G472500 chr3B 94.479 163 9 0 1876 2038 764350811 764350973 4.990000e-63 252.0
25 TraesCS3D01G472500 chr3B 90.110 91 9 0 561 651 764178514 764178604 5.280000e-23 119.0
26 TraesCS3D01G472500 chr3B 88.750 80 9 0 761 840 764341342 764341421 6.880000e-17 99.0
27 TraesCS3D01G472500 chrUn 86.486 185 23 2 999 1182 183945198 183945381 5.090000e-48 202.0
28 TraesCS3D01G472500 chr7A 80.460 87 15 2 1016 1101 708497016 708497101 6.970000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G472500 chr3D 574483122 574486135 3013 True 5566.0 5566 100.000000 1 3014 1 chr3D.!!$R2 3013
1 TraesCS3D01G472500 chr3D 574114505 574115743 1238 False 555.0 555 75.367000 999 2273 1 chr3D.!!$F2 1274
2 TraesCS3D01G472500 chr3D 574062101 574063245 1144 False 407.0 407 73.649000 1001 2167 1 chr3D.!!$F1 1166
3 TraesCS3D01G472500 chr3A 709598307 709599769 1462 True 1838.0 1838 89.355000 989 2476 1 chr3A.!!$R1 1487
4 TraesCS3D01G472500 chr3A 709691452 709697668 6216 True 681.0 1847 87.768500 1 2337 4 chr3A.!!$R3 2336
5 TraesCS3D01G472500 chr3A 709775184 709781249 6065 True 670.0 1945 87.348250 7 2337 4 chr3A.!!$R4 2330
6 TraesCS3D01G472500 chr3A 709589913 709590937 1024 True 663.0 843 90.195500 1610 2600 2 chr3A.!!$R2 990
7 TraesCS3D01G472500 chr3B 764349741 764350973 1232 False 814.0 1376 94.446000 989 2038 2 chr3B.!!$F5 1049
8 TraesCS3D01G472500 chr3B 764178207 764180081 1874 False 705.0 1683 89.227667 297 2476 3 chr3B.!!$F2 2179
9 TraesCS3D01G472500 chr3B 764237296 764240370 3074 False 343.0 377 92.353500 1 526 2 chr3B.!!$F3 525
10 TraesCS3D01G472500 chr3B 764341342 764344403 3061 False 285.5 405 87.418250 761 2286 4 chr3B.!!$F4 1525

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
363 4596 0.099968 CATGGTGGCTGAAGATTGCG 59.9 55.0 0.0 0.0 0.0 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2254 11818 0.517316 AAGTGGCGTTTCTTCGATGC 59.483 50.0 0.0 0.0 0.0 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 34 5.870706 AGAAGAAAAGGGGACTAAAGACTG 58.129 41.667 0.00 0.00 42.68 3.51
42 48 5.515008 GGGACTAAAGACTGAGGGACAAAAT 60.515 44.000 0.00 0.00 0.00 1.82
74 80 6.677913 AGGACATCAAATGAAAAACTAACGG 58.322 36.000 0.00 0.00 0.00 4.44
167 173 4.323104 CCTGAAGAGGGAGTGAAAACTAGG 60.323 50.000 0.00 0.00 35.40 3.02
169 175 3.562108 AGAGGGAGTGAAAACTAGGGA 57.438 47.619 0.00 0.00 0.00 4.20
171 177 4.240323 AGAGGGAGTGAAAACTAGGGAAA 58.760 43.478 0.00 0.00 0.00 3.13
292 4400 5.784578 AGAAAATGTACAAAAGGGACACC 57.215 39.130 0.00 0.00 0.00 4.16
332 4565 6.154534 GCCCTGAACCCTAAAAACTGAATATT 59.845 38.462 0.00 0.00 0.00 1.28
363 4596 0.099968 CATGGTGGCTGAAGATTGCG 59.900 55.000 0.00 0.00 0.00 4.85
376 4610 5.595885 TGAAGATTGCGAAAAACCAATCAA 58.404 33.333 13.74 0.00 46.03 2.57
488 4722 8.546083 ACTGGATCTGAATACTAAGAACTGAT 57.454 34.615 0.00 0.00 0.00 2.90
515 4749 7.745620 AAGGGACATAACAAGTTACTGAAAG 57.254 36.000 0.00 0.00 42.29 2.62
538 4774 4.835284 TTTGAAAAAGTTGGGGCTTTCT 57.165 36.364 0.00 0.00 37.68 2.52
575 4854 0.939577 TCTTGCTTCACTGCGACGTC 60.940 55.000 5.18 5.18 35.36 4.34
587 4866 1.084370 GCGACGTCCTATTTGCTGCT 61.084 55.000 10.58 0.00 0.00 4.24
602 4881 1.980784 CTGCTGGGGAGATGACCTGG 61.981 65.000 0.00 0.00 0.00 4.45
604 4883 0.691078 GCTGGGGAGATGACCTGGTA 60.691 60.000 0.00 0.00 0.00 3.25
607 4886 3.587498 CTGGGGAGATGACCTGGTAATA 58.413 50.000 0.00 0.00 0.00 0.98
659 6480 3.752088 TTGTTGCGGGTACGTGGCA 62.752 57.895 0.00 0.00 43.45 4.92
660 6481 2.744709 GTTGCGGGTACGTGGCAT 60.745 61.111 0.00 0.00 43.45 4.40
661 6482 2.435234 TTGCGGGTACGTGGCATC 60.435 61.111 0.00 0.00 43.45 3.91
662 6483 3.961838 TTGCGGGTACGTGGCATCC 62.962 63.158 0.00 0.00 43.45 3.51
664 6485 4.137872 CGGGTACGTGGCATCCGT 62.138 66.667 8.25 8.25 42.06 4.69
665 6486 2.266689 GGGTACGTGGCATCCGTT 59.733 61.111 8.48 0.00 39.60 4.44
670 6714 2.510064 TACGTGGCATCCGTTGGGTC 62.510 60.000 8.48 0.00 39.60 4.46
671 6715 3.124921 GTGGCATCCGTTGGGTCG 61.125 66.667 0.00 0.00 33.83 4.79
672 6716 3.632080 TGGCATCCGTTGGGTCGT 61.632 61.111 0.00 0.00 33.83 4.34
674 6718 3.799755 GCATCCGTTGGGTCGTGC 61.800 66.667 0.00 0.00 33.02 5.34
708 6752 4.329545 GTGGAGGGGTCTTGCGCA 62.330 66.667 5.66 5.66 0.00 6.09
717 6761 1.618640 GGTCTTGCGCAAGAGACGAC 61.619 60.000 44.21 33.28 46.93 4.34
725 6769 1.738099 CAAGAGACGACGGGCCAAG 60.738 63.158 4.39 0.00 0.00 3.61
748 6839 3.851128 TTGGGTCGTGCACGTGGA 61.851 61.111 35.74 17.06 40.80 4.02
749 6840 4.595538 TGGGTCGTGCACGTGGAC 62.596 66.667 35.74 28.10 40.80 4.02
770 7700 2.229792 GTGGTCCATGTGACACAATGT 58.770 47.619 13.23 0.00 46.38 2.71
776 7706 1.075542 ATGTGACACAATGTACGGCG 58.924 50.000 13.23 4.80 0.00 6.46
808 7738 4.717629 CCAACGGCTCGCGAGACA 62.718 66.667 38.77 3.50 35.77 3.41
843 8175 2.502492 CGTCAGCCGGATGATCCCT 61.502 63.158 27.42 0.00 34.22 4.20
844 8176 1.179174 CGTCAGCCGGATGATCCCTA 61.179 60.000 27.42 0.00 34.22 3.53
845 8177 0.605589 GTCAGCCGGATGATCCCTAG 59.394 60.000 27.42 0.00 31.13 3.02
874 8206 4.010349 CCAGAAAAGAAACCCTAGCGATT 58.990 43.478 0.00 0.00 0.00 3.34
876 8208 4.095036 CAGAAAAGAAACCCTAGCGATTCC 59.905 45.833 0.00 0.00 0.00 3.01
877 8209 4.019231 AGAAAAGAAACCCTAGCGATTCCT 60.019 41.667 0.00 0.00 0.00 3.36
878 8210 5.189145 AGAAAAGAAACCCTAGCGATTCCTA 59.811 40.000 0.00 0.00 0.00 2.94
880 8212 2.365941 AGAAACCCTAGCGATTCCTAGC 59.634 50.000 0.00 0.00 34.74 3.42
881 8213 0.674534 AACCCTAGCGATTCCTAGCG 59.325 55.000 0.00 0.00 38.61 4.26
884 8216 1.133407 CCCTAGCGATTCCTAGCGATC 59.867 57.143 0.00 0.00 34.48 3.69
885 8217 1.133407 CCTAGCGATTCCTAGCGATCC 59.867 57.143 0.00 0.00 34.48 3.36
886 8218 1.813178 CTAGCGATTCCTAGCGATCCA 59.187 52.381 0.00 0.00 34.48 3.41
888 8220 1.620819 AGCGATTCCTAGCGATCCAAT 59.379 47.619 0.00 0.00 34.48 3.16
889 8221 1.728971 GCGATTCCTAGCGATCCAATG 59.271 52.381 0.00 0.00 34.48 2.82
916 8268 8.986929 AAGGAGAACATAGATATTTCCTTTGG 57.013 34.615 0.00 0.00 39.80 3.28
964 8385 2.739523 CTATGCTGCGGCGTCGATCT 62.740 60.000 16.53 0.00 42.25 2.75
966 8387 2.049985 GCTGCGGCGTCGATCTAT 60.050 61.111 16.53 0.00 39.00 1.98
967 8388 2.083522 GCTGCGGCGTCGATCTATC 61.084 63.158 16.53 0.00 39.00 2.08
979 8400 3.351020 CGATCTATCGGTTCGTTTCCT 57.649 47.619 4.43 0.00 45.93 3.36
980 8401 3.703420 CGATCTATCGGTTCGTTTCCTT 58.297 45.455 4.43 0.00 45.93 3.36
982 8403 4.026804 CGATCTATCGGTTCGTTTCCTTTG 60.027 45.833 4.43 0.00 45.93 2.77
983 8404 4.261578 TCTATCGGTTCGTTTCCTTTGT 57.738 40.909 0.00 0.00 0.00 2.83
985 8406 3.619233 ATCGGTTCGTTTCCTTTGTTG 57.381 42.857 0.00 0.00 0.00 3.33
986 8407 1.671845 TCGGTTCGTTTCCTTTGTTGG 59.328 47.619 0.00 0.00 0.00 3.77
987 8408 1.268845 CGGTTCGTTTCCTTTGTTGGG 60.269 52.381 0.00 0.00 0.00 4.12
1005 8502 0.031721 GGGACGATACGACCATGGAC 59.968 60.000 21.47 12.21 42.78 4.02
1038 8539 2.422093 GGAGATTTTGCGGGAGATCCTT 60.422 50.000 0.00 0.00 35.95 3.36
1159 8660 4.501714 GGCATGTCGTCGCCGGTA 62.502 66.667 1.90 0.00 38.82 4.02
1162 8663 3.063704 ATGTCGTCGCCGGTACCA 61.064 61.111 13.54 0.00 33.95 3.25
1324 10657 3.578968 TTCCTCCTCCTCGCGTCCA 62.579 63.158 5.77 0.00 0.00 4.02
1414 10747 4.568359 CACCGAAGATCAATTTCATCGACT 59.432 41.667 6.39 0.00 38.69 4.18
1728 11071 2.423446 CGCCTCCCCTATCAGCAC 59.577 66.667 0.00 0.00 0.00 4.40
1828 11171 0.870393 CGATTTCTGGATCATGCCGG 59.130 55.000 0.00 0.00 35.54 6.13
1829 11172 1.811558 CGATTTCTGGATCATGCCGGT 60.812 52.381 1.90 0.00 35.72 5.28
1886 11412 2.237392 GACTGCCTCATTGGGAACTACT 59.763 50.000 0.00 0.00 35.09 2.57
1887 11413 3.450904 ACTGCCTCATTGGGAACTACTA 58.549 45.455 0.00 0.00 35.09 1.82
1924 11450 2.868583 GACGACATGGACATTCATGAGG 59.131 50.000 7.17 1.20 45.30 3.86
2013 11539 3.795623 GGCGACCATCTCTACAAGTAA 57.204 47.619 0.00 0.00 0.00 2.24
2026 11552 6.759827 TCTCTACAAGTAAGACACCAACAAAC 59.240 38.462 0.00 0.00 0.00 2.93
2254 11818 1.850377 TGTTGTGCGATGCCAAAAAG 58.150 45.000 0.00 0.00 0.00 2.27
2286 11850 1.164041 GCCACTTTACGTGCACACCT 61.164 55.000 18.64 0.41 42.42 4.00
2337 11908 1.746787 GTTGTCAAAAGGGTTCGTGGT 59.253 47.619 0.00 0.00 0.00 4.16
2360 11934 3.557475 CCAACACGGTAATCCAACCTACA 60.557 47.826 0.00 0.00 37.39 2.74
2367 11941 2.851263 AATCCAACCTACAGACGCAA 57.149 45.000 0.00 0.00 0.00 4.85
2435 12016 7.751768 AACTATTCACCCTTTCTCTTTCTTG 57.248 36.000 0.00 0.00 0.00 3.02
2436 12017 7.079451 ACTATTCACCCTTTCTCTTTCTTGA 57.921 36.000 0.00 0.00 0.00 3.02
2440 12021 3.251972 CACCCTTTCTCTTTCTTGACAGC 59.748 47.826 0.00 0.00 0.00 4.40
2447 12028 7.592903 CCTTTCTCTTTCTTGACAGCATTTTAC 59.407 37.037 0.00 0.00 0.00 2.01
2452 12033 8.801715 TCTTTCTTGACAGCATTTTACATTTC 57.198 30.769 0.00 0.00 0.00 2.17
2454 12035 9.199982 CTTTCTTGACAGCATTTTACATTTCAT 57.800 29.630 0.00 0.00 0.00 2.57
2544 12126 8.574196 AAGAAAAACATTATGCACACAAGTAC 57.426 30.769 0.00 0.00 0.00 2.73
2558 12140 3.070446 CACAAGTACAGGTTGGTGGTCTA 59.930 47.826 0.00 0.00 0.00 2.59
2563 12145 3.255634 ACAGGTTGGTGGTCTAGTACT 57.744 47.619 0.00 0.00 0.00 2.73
2566 12148 2.382649 AGGTTGGTGGTCTAGTACTCCT 59.617 50.000 0.00 0.00 0.00 3.69
2568 12150 3.581770 GGTTGGTGGTCTAGTACTCCTTT 59.418 47.826 0.00 0.00 0.00 3.11
2600 12182 8.284693 AAAGTATTCTTCATGTGCAATTTTTGC 58.715 29.630 5.30 5.30 43.70 3.68
2611 12193 3.469899 CAATTTTTGCCATCGACGAGA 57.530 42.857 3.01 0.00 0.00 4.04
2612 12194 4.019919 CAATTTTTGCCATCGACGAGAT 57.980 40.909 3.01 0.00 41.01 2.75
2622 12204 2.939460 TCGACGAGATGATTGAGCAA 57.061 45.000 0.00 0.00 0.00 3.91
2623 12205 3.230743 TCGACGAGATGATTGAGCAAA 57.769 42.857 0.00 0.00 0.00 3.68
2624 12206 2.923655 TCGACGAGATGATTGAGCAAAC 59.076 45.455 0.00 0.00 0.00 2.93
2625 12207 2.926200 CGACGAGATGATTGAGCAAACT 59.074 45.455 0.00 0.00 0.00 2.66
2626 12208 3.000277 CGACGAGATGATTGAGCAAACTC 60.000 47.826 0.00 0.00 43.76 3.01
2627 12209 2.926200 ACGAGATGATTGAGCAAACTCG 59.074 45.455 19.29 19.29 46.69 4.18
2628 12210 2.285486 CGAGATGATTGAGCAAACTCGC 60.285 50.000 12.99 0.00 46.69 5.03
2629 12211 2.935201 GAGATGATTGAGCAAACTCGCT 59.065 45.455 0.00 0.00 46.69 4.93
2630 12212 3.341823 AGATGATTGAGCAAACTCGCTT 58.658 40.909 0.00 0.00 46.69 4.68
2631 12213 3.755378 AGATGATTGAGCAAACTCGCTTT 59.245 39.130 0.00 0.00 46.69 3.51
2632 12214 3.272439 TGATTGAGCAAACTCGCTTTG 57.728 42.857 0.00 2.03 46.69 2.77
2633 12215 2.030893 TGATTGAGCAAACTCGCTTTGG 60.031 45.455 7.31 0.00 46.69 3.28
2634 12216 1.674359 TTGAGCAAACTCGCTTTGGA 58.326 45.000 7.31 0.00 46.69 3.53
2635 12217 1.674359 TGAGCAAACTCGCTTTGGAA 58.326 45.000 7.31 0.00 46.69 3.53
2636 12218 1.603802 TGAGCAAACTCGCTTTGGAAG 59.396 47.619 7.31 0.00 46.69 3.46
2637 12219 0.954452 AGCAAACTCGCTTTGGAAGG 59.046 50.000 7.31 0.00 39.99 3.46
2638 12220 0.039165 GCAAACTCGCTTTGGAAGGG 60.039 55.000 7.31 0.00 39.89 3.95
2639 12221 1.604604 CAAACTCGCTTTGGAAGGGA 58.395 50.000 7.15 7.15 46.65 4.20
2640 12222 1.266989 CAAACTCGCTTTGGAAGGGAC 59.733 52.381 3.66 0.00 44.37 4.46
2641 12223 0.250770 AACTCGCTTTGGAAGGGACC 60.251 55.000 3.66 0.00 44.37 4.46
2642 12224 1.741770 CTCGCTTTGGAAGGGACCG 60.742 63.158 3.66 0.00 44.37 4.79
2643 12225 2.032071 CGCTTTGGAAGGGACCGT 59.968 61.111 0.00 0.00 43.53 4.83
2644 12226 2.033194 CGCTTTGGAAGGGACCGTC 61.033 63.158 0.00 0.00 43.53 4.79
2645 12227 2.033194 GCTTTGGAAGGGACCGTCG 61.033 63.158 0.00 0.00 0.00 5.12
2646 12228 1.375523 CTTTGGAAGGGACCGTCGG 60.376 63.158 10.48 10.48 0.00 4.79
2647 12229 2.108278 CTTTGGAAGGGACCGTCGGT 62.108 60.000 18.94 18.94 39.44 4.69
2648 12230 1.698067 TTTGGAAGGGACCGTCGGTT 61.698 55.000 19.95 1.33 35.25 4.44
2649 12231 2.047560 GGAAGGGACCGTCGGTTG 60.048 66.667 19.95 0.00 35.25 3.77
2650 12232 2.576832 GGAAGGGACCGTCGGTTGA 61.577 63.158 19.95 0.00 35.25 3.18
2651 12233 1.080025 GAAGGGACCGTCGGTTGAG 60.080 63.158 19.95 0.00 35.25 3.02
2652 12234 2.502692 GAAGGGACCGTCGGTTGAGG 62.503 65.000 19.95 0.00 35.25 3.86
2653 12235 2.993264 GGGACCGTCGGTTGAGGA 60.993 66.667 19.95 0.00 35.25 3.71
2654 12236 2.572284 GGACCGTCGGTTGAGGAG 59.428 66.667 19.95 0.00 35.25 3.69
2655 12237 1.975407 GGACCGTCGGTTGAGGAGA 60.975 63.158 19.95 0.00 35.25 3.71
2656 12238 1.530013 GGACCGTCGGTTGAGGAGAA 61.530 60.000 19.95 0.00 35.25 2.87
2657 12239 0.316204 GACCGTCGGTTGAGGAGAAA 59.684 55.000 19.95 0.00 35.25 2.52
2658 12240 0.754472 ACCGTCGGTTGAGGAGAAAA 59.246 50.000 12.23 0.00 27.29 2.29
2659 12241 1.270147 ACCGTCGGTTGAGGAGAAAAG 60.270 52.381 12.23 0.00 27.29 2.27
2660 12242 1.429463 CGTCGGTTGAGGAGAAAAGG 58.571 55.000 0.00 0.00 31.63 3.11
2661 12243 1.270147 CGTCGGTTGAGGAGAAAAGGT 60.270 52.381 0.00 0.00 31.63 3.50
2662 12244 2.805657 CGTCGGTTGAGGAGAAAAGGTT 60.806 50.000 0.00 0.00 31.63 3.50
2663 12245 3.553508 CGTCGGTTGAGGAGAAAAGGTTA 60.554 47.826 0.00 0.00 31.63 2.85
2664 12246 3.995048 GTCGGTTGAGGAGAAAAGGTTAG 59.005 47.826 0.00 0.00 0.00 2.34
2665 12247 3.644738 TCGGTTGAGGAGAAAAGGTTAGT 59.355 43.478 0.00 0.00 0.00 2.24
2666 12248 3.995048 CGGTTGAGGAGAAAAGGTTAGTC 59.005 47.826 0.00 0.00 0.00 2.59
2667 12249 4.502604 CGGTTGAGGAGAAAAGGTTAGTCA 60.503 45.833 0.00 0.00 0.00 3.41
2668 12250 5.561679 GGTTGAGGAGAAAAGGTTAGTCAT 58.438 41.667 0.00 0.00 0.00 3.06
2669 12251 5.412904 GGTTGAGGAGAAAAGGTTAGTCATG 59.587 44.000 0.00 0.00 0.00 3.07
2670 12252 6.231211 GTTGAGGAGAAAAGGTTAGTCATGA 58.769 40.000 0.00 0.00 0.00 3.07
2671 12253 6.042638 TGAGGAGAAAAGGTTAGTCATGAG 57.957 41.667 0.00 0.00 0.00 2.90
2672 12254 5.780282 TGAGGAGAAAAGGTTAGTCATGAGA 59.220 40.000 0.00 0.00 0.00 3.27
2673 12255 6.270000 TGAGGAGAAAAGGTTAGTCATGAGAA 59.730 38.462 0.00 0.00 0.00 2.87
2674 12256 7.038017 TGAGGAGAAAAGGTTAGTCATGAGAAT 60.038 37.037 0.00 0.00 0.00 2.40
2675 12257 8.380742 AGGAGAAAAGGTTAGTCATGAGAATA 57.619 34.615 0.00 0.00 0.00 1.75
2676 12258 8.997734 AGGAGAAAAGGTTAGTCATGAGAATAT 58.002 33.333 0.00 0.00 0.00 1.28
2677 12259 9.267084 GGAGAAAAGGTTAGTCATGAGAATATC 57.733 37.037 0.00 0.00 0.00 1.63
2679 12261 9.829507 AGAAAAGGTTAGTCATGAGAATATCTG 57.170 33.333 0.00 0.00 0.00 2.90
2680 12262 9.823647 GAAAAGGTTAGTCATGAGAATATCTGA 57.176 33.333 0.00 0.00 0.00 3.27
2682 12264 9.606631 AAAGGTTAGTCATGAGAATATCTGAAC 57.393 33.333 0.00 0.00 0.00 3.18
2683 12265 8.546083 AGGTTAGTCATGAGAATATCTGAACT 57.454 34.615 0.00 0.00 0.00 3.01
2684 12266 9.647918 AGGTTAGTCATGAGAATATCTGAACTA 57.352 33.333 0.00 0.00 0.00 2.24
2689 12271 7.877097 AGTCATGAGAATATCTGAACTATTGGC 59.123 37.037 0.00 0.00 0.00 4.52
2690 12272 7.658982 GTCATGAGAATATCTGAACTATTGGCA 59.341 37.037 0.00 0.00 0.00 4.92
2691 12273 8.212995 TCATGAGAATATCTGAACTATTGGCAA 58.787 33.333 0.68 0.68 0.00 4.52
2692 12274 8.504815 CATGAGAATATCTGAACTATTGGCAAG 58.495 37.037 5.96 0.00 0.00 4.01
2693 12275 6.994496 TGAGAATATCTGAACTATTGGCAAGG 59.006 38.462 5.96 3.73 0.00 3.61
2694 12276 6.302269 AGAATATCTGAACTATTGGCAAGGG 58.698 40.000 5.96 3.35 0.00 3.95
2695 12277 5.912149 ATATCTGAACTATTGGCAAGGGA 57.088 39.130 5.96 0.00 0.00 4.20
2696 12278 3.634397 TCTGAACTATTGGCAAGGGAG 57.366 47.619 5.96 5.59 0.00 4.30
2697 12279 2.239654 TCTGAACTATTGGCAAGGGAGG 59.760 50.000 5.96 0.00 0.00 4.30
2698 12280 2.239654 CTGAACTATTGGCAAGGGAGGA 59.760 50.000 5.96 0.00 0.00 3.71
2699 12281 2.647299 TGAACTATTGGCAAGGGAGGAA 59.353 45.455 5.96 0.00 0.00 3.36
2700 12282 3.282885 GAACTATTGGCAAGGGAGGAAG 58.717 50.000 5.96 0.00 0.00 3.46
2701 12283 1.064389 ACTATTGGCAAGGGAGGAAGC 60.064 52.381 5.96 0.00 0.00 3.86
2702 12284 0.998928 TATTGGCAAGGGAGGAAGCA 59.001 50.000 5.96 0.00 0.00 3.91
2703 12285 0.114954 ATTGGCAAGGGAGGAAGCAA 59.885 50.000 5.96 0.00 0.00 3.91
2704 12286 0.114954 TTGGCAAGGGAGGAAGCAAT 59.885 50.000 0.00 0.00 0.00 3.56
2705 12287 0.612732 TGGCAAGGGAGGAAGCAATG 60.613 55.000 0.00 0.00 0.00 2.82
2706 12288 1.325476 GGCAAGGGAGGAAGCAATGG 61.325 60.000 0.00 0.00 0.00 3.16
2707 12289 0.323725 GCAAGGGAGGAAGCAATGGA 60.324 55.000 0.00 0.00 0.00 3.41
2708 12290 1.892329 GCAAGGGAGGAAGCAATGGAA 60.892 52.381 0.00 0.00 0.00 3.53
2709 12291 2.528564 CAAGGGAGGAAGCAATGGAAA 58.471 47.619 0.00 0.00 0.00 3.13
2710 12292 2.899256 CAAGGGAGGAAGCAATGGAAAA 59.101 45.455 0.00 0.00 0.00 2.29
2711 12293 3.258722 AGGGAGGAAGCAATGGAAAAA 57.741 42.857 0.00 0.00 0.00 1.94
2712 12294 3.794911 AGGGAGGAAGCAATGGAAAAAT 58.205 40.909 0.00 0.00 0.00 1.82
2713 12295 4.946646 AGGGAGGAAGCAATGGAAAAATA 58.053 39.130 0.00 0.00 0.00 1.40
2714 12296 5.341169 AGGGAGGAAGCAATGGAAAAATAA 58.659 37.500 0.00 0.00 0.00 1.40
2715 12297 5.187772 AGGGAGGAAGCAATGGAAAAATAAC 59.812 40.000 0.00 0.00 0.00 1.89
2716 12298 5.102313 GGAGGAAGCAATGGAAAAATAACG 58.898 41.667 0.00 0.00 0.00 3.18
2717 12299 5.336451 GGAGGAAGCAATGGAAAAATAACGT 60.336 40.000 0.00 0.00 0.00 3.99
2718 12300 6.096673 AGGAAGCAATGGAAAAATAACGTT 57.903 33.333 5.88 5.88 0.00 3.99
2719 12301 6.156519 AGGAAGCAATGGAAAAATAACGTTC 58.843 36.000 2.82 0.00 0.00 3.95
2720 12302 5.347635 GGAAGCAATGGAAAAATAACGTTCC 59.652 40.000 2.82 0.00 43.15 3.62
2721 12303 4.816392 AGCAATGGAAAAATAACGTTCCC 58.184 39.130 2.82 0.00 42.33 3.97
2722 12304 3.610677 GCAATGGAAAAATAACGTTCCCG 59.389 43.478 2.82 0.00 42.33 5.14
2723 12305 4.170256 CAATGGAAAAATAACGTTCCCGG 58.830 43.478 2.82 0.00 42.33 5.73
2724 12306 2.161030 TGGAAAAATAACGTTCCCGGG 58.839 47.619 16.85 16.85 42.33 5.73
2725 12307 2.161855 GGAAAAATAACGTTCCCGGGT 58.838 47.619 22.86 2.31 37.87 5.28
2726 12308 2.095110 GGAAAAATAACGTTCCCGGGTG 60.095 50.000 22.86 14.44 37.87 4.61
2727 12309 2.565046 AAAATAACGTTCCCGGGTGA 57.435 45.000 22.86 7.94 38.78 4.02
2728 12310 2.793288 AAATAACGTTCCCGGGTGAT 57.207 45.000 22.86 9.20 38.78 3.06
2729 12311 2.032680 AATAACGTTCCCGGGTGATG 57.967 50.000 22.86 17.85 38.78 3.07
2730 12312 0.906775 ATAACGTTCCCGGGTGATGT 59.093 50.000 22.86 18.52 38.78 3.06
2731 12313 0.037139 TAACGTTCCCGGGTGATGTG 60.037 55.000 22.86 8.33 38.78 3.21
2732 12314 2.435938 CGTTCCCGGGTGATGTGG 60.436 66.667 22.86 0.00 0.00 4.17
2733 12315 2.750237 GTTCCCGGGTGATGTGGC 60.750 66.667 22.86 0.00 0.00 5.01
2734 12316 2.933287 TTCCCGGGTGATGTGGCT 60.933 61.111 22.86 0.00 0.00 4.75
2735 12317 2.966732 TTCCCGGGTGATGTGGCTC 61.967 63.158 22.86 0.00 0.00 4.70
2736 12318 3.402681 CCCGGGTGATGTGGCTCT 61.403 66.667 14.18 0.00 0.00 4.09
2737 12319 2.187946 CCGGGTGATGTGGCTCTC 59.812 66.667 0.00 0.00 0.00 3.20
2738 12320 2.362369 CCGGGTGATGTGGCTCTCT 61.362 63.158 0.00 0.00 0.00 3.10
2739 12321 1.153489 CGGGTGATGTGGCTCTCTG 60.153 63.158 0.00 0.00 0.00 3.35
2740 12322 1.607801 CGGGTGATGTGGCTCTCTGA 61.608 60.000 0.00 0.00 0.00 3.27
2741 12323 0.177604 GGGTGATGTGGCTCTCTGAG 59.822 60.000 0.00 0.00 0.00 3.35
2742 12324 0.177604 GGTGATGTGGCTCTCTGAGG 59.822 60.000 4.59 0.00 0.00 3.86
2743 12325 0.177604 GTGATGTGGCTCTCTGAGGG 59.822 60.000 4.59 1.71 0.00 4.30
2744 12326 0.252421 TGATGTGGCTCTCTGAGGGT 60.252 55.000 6.39 0.00 0.00 4.34
2745 12327 0.177604 GATGTGGCTCTCTGAGGGTG 59.822 60.000 6.39 0.00 0.00 4.61
2746 12328 0.252421 ATGTGGCTCTCTGAGGGTGA 60.252 55.000 6.39 0.00 0.00 4.02
2747 12329 1.188219 TGTGGCTCTCTGAGGGTGAC 61.188 60.000 6.39 3.98 0.00 3.67
2767 12349 1.504359 CGTAACACGGGCTTCTTTCA 58.496 50.000 0.00 0.00 38.08 2.69
2768 12350 2.073816 CGTAACACGGGCTTCTTTCAT 58.926 47.619 0.00 0.00 38.08 2.57
2769 12351 2.159707 CGTAACACGGGCTTCTTTCATG 60.160 50.000 0.00 0.00 38.08 3.07
2770 12352 0.598065 AACACGGGCTTCTTTCATGC 59.402 50.000 0.00 0.00 0.00 4.06
2771 12353 1.135315 CACGGGCTTCTTTCATGCG 59.865 57.895 0.00 0.00 0.00 4.73
2772 12354 2.100991 CGGGCTTCTTTCATGCGC 59.899 61.111 0.00 0.00 35.41 6.09
2773 12355 2.689785 CGGGCTTCTTTCATGCGCA 61.690 57.895 14.96 14.96 37.83 6.09
2774 12356 1.586028 GGGCTTCTTTCATGCGCAA 59.414 52.632 17.11 0.00 37.86 4.85
2775 12357 0.038343 GGGCTTCTTTCATGCGCAAA 60.038 50.000 17.11 0.98 37.86 3.68
2776 12358 1.063031 GGCTTCTTTCATGCGCAAAC 58.937 50.000 17.11 0.00 0.00 2.93
2777 12359 1.602668 GGCTTCTTTCATGCGCAAACA 60.603 47.619 17.11 0.00 0.00 2.83
2778 12360 2.126467 GCTTCTTTCATGCGCAAACAA 58.874 42.857 17.11 4.28 0.00 2.83
2779 12361 2.539274 GCTTCTTTCATGCGCAAACAAA 59.461 40.909 17.11 12.69 0.00 2.83
2780 12362 3.362304 GCTTCTTTCATGCGCAAACAAAG 60.362 43.478 17.11 21.33 0.00 2.77
2781 12363 2.741612 TCTTTCATGCGCAAACAAAGG 58.258 42.857 26.22 15.38 0.00 3.11
2782 12364 2.360483 TCTTTCATGCGCAAACAAAGGA 59.640 40.909 26.22 16.89 0.00 3.36
2783 12365 2.879002 TTCATGCGCAAACAAAGGAA 57.121 40.000 17.11 7.11 0.00 3.36
2784 12366 2.879002 TCATGCGCAAACAAAGGAAA 57.121 40.000 17.11 0.00 0.00 3.13
2785 12367 2.741612 TCATGCGCAAACAAAGGAAAG 58.258 42.857 17.11 0.00 0.00 2.62
2786 12368 1.794116 CATGCGCAAACAAAGGAAAGG 59.206 47.619 17.11 0.00 0.00 3.11
2787 12369 0.103937 TGCGCAAACAAAGGAAAGGG 59.896 50.000 8.16 0.00 0.00 3.95
2788 12370 1.221466 GCGCAAACAAAGGAAAGGGC 61.221 55.000 0.30 0.00 0.00 5.19
2789 12371 0.103937 CGCAAACAAAGGAAAGGGCA 59.896 50.000 0.00 0.00 0.00 5.36
2790 12372 1.581934 GCAAACAAAGGAAAGGGCAC 58.418 50.000 0.00 0.00 0.00 5.01
2791 12373 1.851658 CAAACAAAGGAAAGGGCACG 58.148 50.000 0.00 0.00 0.00 5.34
2792 12374 1.136110 CAAACAAAGGAAAGGGCACGT 59.864 47.619 0.00 0.00 0.00 4.49
2793 12375 0.744281 AACAAAGGAAAGGGCACGTG 59.256 50.000 12.28 12.28 0.00 4.49
2794 12376 0.395173 ACAAAGGAAAGGGCACGTGT 60.395 50.000 18.38 0.00 0.00 4.49
2795 12377 1.134037 ACAAAGGAAAGGGCACGTGTA 60.134 47.619 18.38 0.00 0.00 2.90
2796 12378 1.950909 CAAAGGAAAGGGCACGTGTAA 59.049 47.619 18.38 0.00 0.00 2.41
2797 12379 2.351706 AAGGAAAGGGCACGTGTAAA 57.648 45.000 18.38 0.00 0.00 2.01
2798 12380 1.601166 AGGAAAGGGCACGTGTAAAC 58.399 50.000 18.38 5.32 0.00 2.01
2799 12381 1.134037 AGGAAAGGGCACGTGTAAACA 60.134 47.619 18.38 0.00 0.00 2.83
2800 12382 1.677052 GGAAAGGGCACGTGTAAACAA 59.323 47.619 18.38 0.00 0.00 2.83
2801 12383 2.287368 GGAAAGGGCACGTGTAAACAAG 60.287 50.000 18.38 0.00 0.00 3.16
2802 12384 2.335316 AAGGGCACGTGTAAACAAGA 57.665 45.000 18.38 0.00 0.00 3.02
2803 12385 2.561478 AGGGCACGTGTAAACAAGAT 57.439 45.000 18.38 0.00 0.00 2.40
2804 12386 2.858745 AGGGCACGTGTAAACAAGATT 58.141 42.857 18.38 0.00 0.00 2.40
2805 12387 3.219281 AGGGCACGTGTAAACAAGATTT 58.781 40.909 18.38 0.00 0.00 2.17
2806 12388 4.391155 AGGGCACGTGTAAACAAGATTTA 58.609 39.130 18.38 0.00 0.00 1.40
2807 12389 4.822896 AGGGCACGTGTAAACAAGATTTAA 59.177 37.500 18.38 0.00 0.00 1.52
2808 12390 5.475564 AGGGCACGTGTAAACAAGATTTAAT 59.524 36.000 18.38 0.00 0.00 1.40
2809 12391 5.798434 GGGCACGTGTAAACAAGATTTAATC 59.202 40.000 18.38 0.00 0.00 1.75
2810 12392 6.349033 GGGCACGTGTAAACAAGATTTAATCT 60.349 38.462 18.38 0.99 42.61 2.40
2811 12393 6.741358 GGCACGTGTAAACAAGATTTAATCTC 59.259 38.462 18.38 0.00 39.08 2.75
2812 12394 7.360946 GGCACGTGTAAACAAGATTTAATCTCT 60.361 37.037 18.38 0.00 39.08 3.10
2813 12395 8.015658 GCACGTGTAAACAAGATTTAATCTCTT 58.984 33.333 18.38 5.29 39.08 2.85
2814 12396 9.530129 CACGTGTAAACAAGATTTAATCTCTTC 57.470 33.333 7.58 0.00 39.08 2.87
2815 12397 9.268268 ACGTGTAAACAAGATTTAATCTCTTCA 57.732 29.630 8.00 0.77 39.08 3.02
2845 12427 2.950781 TGGAACAACAATAACAGGCCA 58.049 42.857 5.01 0.00 31.92 5.36
2846 12428 2.890311 TGGAACAACAATAACAGGCCAG 59.110 45.455 5.01 0.00 31.92 4.85
2847 12429 3.153919 GGAACAACAATAACAGGCCAGA 58.846 45.455 5.01 0.00 0.00 3.86
2848 12430 3.191371 GGAACAACAATAACAGGCCAGAG 59.809 47.826 5.01 0.00 0.00 3.35
2849 12431 3.508845 ACAACAATAACAGGCCAGAGT 57.491 42.857 5.01 0.00 0.00 3.24
2850 12432 3.149196 ACAACAATAACAGGCCAGAGTG 58.851 45.455 5.01 0.00 0.00 3.51
2851 12433 3.181445 ACAACAATAACAGGCCAGAGTGA 60.181 43.478 5.01 0.00 0.00 3.41
2852 12434 3.788227 ACAATAACAGGCCAGAGTGAA 57.212 42.857 5.01 0.00 0.00 3.18
2853 12435 3.412386 ACAATAACAGGCCAGAGTGAAC 58.588 45.455 5.01 0.00 0.00 3.18
2854 12436 3.073062 ACAATAACAGGCCAGAGTGAACT 59.927 43.478 5.01 0.00 0.00 3.01
2855 12437 4.286032 ACAATAACAGGCCAGAGTGAACTA 59.714 41.667 5.01 0.00 0.00 2.24
2856 12438 4.744795 ATAACAGGCCAGAGTGAACTAG 57.255 45.455 5.01 0.00 0.00 2.57
2857 12439 2.310779 ACAGGCCAGAGTGAACTAGA 57.689 50.000 5.01 0.00 0.00 2.43
2858 12440 2.175202 ACAGGCCAGAGTGAACTAGAG 58.825 52.381 5.01 0.00 0.00 2.43
2859 12441 1.480137 CAGGCCAGAGTGAACTAGAGG 59.520 57.143 5.01 0.00 0.00 3.69
2860 12442 1.359474 AGGCCAGAGTGAACTAGAGGA 59.641 52.381 5.01 0.00 0.00 3.71
2861 12443 2.180276 GGCCAGAGTGAACTAGAGGAA 58.820 52.381 0.00 0.00 0.00 3.36
2862 12444 2.167487 GGCCAGAGTGAACTAGAGGAAG 59.833 54.545 0.00 0.00 0.00 3.46
2863 12445 2.418060 GCCAGAGTGAACTAGAGGAAGC 60.418 54.545 0.00 0.00 0.00 3.86
2864 12446 3.096092 CCAGAGTGAACTAGAGGAAGCT 58.904 50.000 0.00 0.00 0.00 3.74
2865 12447 3.119173 CCAGAGTGAACTAGAGGAAGCTG 60.119 52.174 0.00 0.00 0.00 4.24
2866 12448 2.495669 AGAGTGAACTAGAGGAAGCTGC 59.504 50.000 0.00 0.00 0.00 5.25
2867 12449 1.552792 AGTGAACTAGAGGAAGCTGCC 59.447 52.381 0.73 0.73 0.00 4.85
2868 12450 1.276421 GTGAACTAGAGGAAGCTGCCA 59.724 52.381 15.05 0.00 0.00 4.92
2869 12451 1.977854 TGAACTAGAGGAAGCTGCCAA 59.022 47.619 15.05 0.00 0.00 4.52
2870 12452 2.027745 TGAACTAGAGGAAGCTGCCAAG 60.028 50.000 15.05 9.86 0.00 3.61
2871 12453 0.908198 ACTAGAGGAAGCTGCCAAGG 59.092 55.000 15.05 2.37 0.00 3.61
2872 12454 1.198713 CTAGAGGAAGCTGCCAAGGA 58.801 55.000 15.05 0.00 0.00 3.36
2873 12455 1.767681 CTAGAGGAAGCTGCCAAGGAT 59.232 52.381 15.05 0.00 0.00 3.24
2874 12456 0.998145 AGAGGAAGCTGCCAAGGATT 59.002 50.000 15.05 0.00 0.00 3.01
2875 12457 1.357079 AGAGGAAGCTGCCAAGGATTT 59.643 47.619 15.05 0.00 0.00 2.17
2876 12458 2.174360 GAGGAAGCTGCCAAGGATTTT 58.826 47.619 15.05 0.00 0.00 1.82
2877 12459 2.564504 GAGGAAGCTGCCAAGGATTTTT 59.435 45.455 15.05 0.00 0.00 1.94
2878 12460 3.763897 GAGGAAGCTGCCAAGGATTTTTA 59.236 43.478 15.05 0.00 0.00 1.52
2879 12461 4.356436 AGGAAGCTGCCAAGGATTTTTAT 58.644 39.130 15.05 0.00 0.00 1.40
2880 12462 4.403752 AGGAAGCTGCCAAGGATTTTTATC 59.596 41.667 15.05 0.00 0.00 1.75
2881 12463 4.160252 GGAAGCTGCCAAGGATTTTTATCA 59.840 41.667 5.59 0.00 0.00 2.15
2882 12464 4.996788 AGCTGCCAAGGATTTTTATCAG 57.003 40.909 0.00 0.00 0.00 2.90
2883 12465 4.347607 AGCTGCCAAGGATTTTTATCAGT 58.652 39.130 0.00 0.00 0.00 3.41
2884 12466 4.400567 AGCTGCCAAGGATTTTTATCAGTC 59.599 41.667 0.00 0.00 0.00 3.51
2885 12467 4.440663 GCTGCCAAGGATTTTTATCAGTCC 60.441 45.833 0.00 0.00 0.00 3.85
2886 12468 4.934356 TGCCAAGGATTTTTATCAGTCCT 58.066 39.130 0.00 0.00 42.73 3.85
2894 12476 9.588096 AAGGATTTTTATCAGTCCTTGTTTACT 57.412 29.630 4.81 0.00 46.43 2.24
2895 12477 9.588096 AGGATTTTTATCAGTCCTTGTTTACTT 57.412 29.630 0.00 0.00 37.84 2.24
2896 12478 9.841880 GGATTTTTATCAGTCCTTGTTTACTTC 57.158 33.333 0.00 0.00 0.00 3.01
2899 12481 9.621629 TTTTTATCAGTCCTTGTTTACTTCAGA 57.378 29.630 0.00 0.00 0.00 3.27
2900 12482 8.833231 TTTATCAGTCCTTGTTTACTTCAGAG 57.167 34.615 0.00 0.00 0.00 3.35
2901 12483 5.215252 TCAGTCCTTGTTTACTTCAGAGG 57.785 43.478 0.00 0.00 0.00 3.69
2902 12484 4.654262 TCAGTCCTTGTTTACTTCAGAGGT 59.346 41.667 0.00 0.00 0.00 3.85
2903 12485 4.752101 CAGTCCTTGTTTACTTCAGAGGTG 59.248 45.833 0.00 0.00 0.00 4.00
2904 12486 4.654262 AGTCCTTGTTTACTTCAGAGGTGA 59.346 41.667 0.00 0.00 0.00 4.02
2905 12487 5.130477 AGTCCTTGTTTACTTCAGAGGTGAA 59.870 40.000 0.00 0.00 40.55 3.18
2906 12488 5.998363 GTCCTTGTTTACTTCAGAGGTGAAT 59.002 40.000 0.00 0.00 41.96 2.57
2907 12489 7.016268 AGTCCTTGTTTACTTCAGAGGTGAATA 59.984 37.037 0.00 0.00 41.96 1.75
2908 12490 7.117956 GTCCTTGTTTACTTCAGAGGTGAATAC 59.882 40.741 0.00 0.00 41.96 1.89
2909 12491 7.016268 TCCTTGTTTACTTCAGAGGTGAATACT 59.984 37.037 0.00 0.00 41.96 2.12
2910 12492 7.332182 CCTTGTTTACTTCAGAGGTGAATACTC 59.668 40.741 0.00 0.00 41.96 2.59
2911 12493 7.297936 TGTTTACTTCAGAGGTGAATACTCA 57.702 36.000 0.00 0.00 41.96 3.41
2912 12494 7.378966 TGTTTACTTCAGAGGTGAATACTCAG 58.621 38.462 0.00 0.00 41.96 3.35
2919 12501 1.661341 GGTGAATACTCAGCCTGCTG 58.339 55.000 12.91 12.91 43.05 4.41
2929 12511 2.569059 TCAGCCTGCTGAGATTATTGC 58.431 47.619 17.46 0.00 46.80 3.56
2930 12512 2.172082 TCAGCCTGCTGAGATTATTGCT 59.828 45.455 17.46 0.00 46.80 3.91
2931 12513 2.950309 CAGCCTGCTGAGATTATTGCTT 59.050 45.455 13.85 0.00 46.30 3.91
2932 12514 4.132336 CAGCCTGCTGAGATTATTGCTTA 58.868 43.478 13.85 0.00 46.30 3.09
2933 12515 4.760715 CAGCCTGCTGAGATTATTGCTTAT 59.239 41.667 13.85 0.00 46.30 1.73
2934 12516 4.760715 AGCCTGCTGAGATTATTGCTTATG 59.239 41.667 0.00 0.00 0.00 1.90
2935 12517 4.518211 GCCTGCTGAGATTATTGCTTATGT 59.482 41.667 0.00 0.00 0.00 2.29
2936 12518 5.562307 GCCTGCTGAGATTATTGCTTATGTG 60.562 44.000 0.00 0.00 0.00 3.21
2937 12519 5.428496 TGCTGAGATTATTGCTTATGTGC 57.572 39.130 0.00 0.00 0.00 4.57
2938 12520 4.883006 TGCTGAGATTATTGCTTATGTGCA 59.117 37.500 0.00 0.00 41.65 4.57
2946 12528 1.255882 TGCTTATGTGCAACCCAAGG 58.744 50.000 0.00 0.00 40.29 3.61
2947 12529 1.256812 GCTTATGTGCAACCCAAGGT 58.743 50.000 0.00 0.00 37.65 3.50
2949 12531 2.823154 GCTTATGTGCAACCCAAGGTTA 59.177 45.455 0.00 0.00 45.01 2.85
2950 12532 3.366985 GCTTATGTGCAACCCAAGGTTAC 60.367 47.826 0.00 0.00 45.01 2.50
2951 12533 2.675658 ATGTGCAACCCAAGGTTACT 57.324 45.000 0.00 0.00 45.01 2.24
2952 12534 1.686355 TGTGCAACCCAAGGTTACTG 58.314 50.000 0.00 0.00 45.01 2.74
2953 12535 1.213182 TGTGCAACCCAAGGTTACTGA 59.787 47.619 0.00 0.00 45.01 3.41
2954 12536 2.303175 GTGCAACCCAAGGTTACTGAA 58.697 47.619 0.00 0.00 45.01 3.02
2955 12537 2.890945 GTGCAACCCAAGGTTACTGAAT 59.109 45.455 0.00 0.00 45.01 2.57
2956 12538 3.320826 GTGCAACCCAAGGTTACTGAATT 59.679 43.478 0.00 0.00 45.01 2.17
2957 12539 4.521256 GTGCAACCCAAGGTTACTGAATTA 59.479 41.667 0.00 0.00 45.01 1.40
2958 12540 5.010213 GTGCAACCCAAGGTTACTGAATTAA 59.990 40.000 0.00 0.00 45.01 1.40
2959 12541 5.777732 TGCAACCCAAGGTTACTGAATTAAT 59.222 36.000 0.00 0.00 45.01 1.40
2960 12542 6.099341 GCAACCCAAGGTTACTGAATTAATG 58.901 40.000 0.00 0.00 45.01 1.90
2961 12543 6.071616 GCAACCCAAGGTTACTGAATTAATGA 60.072 38.462 0.00 0.00 45.01 2.57
2962 12544 7.524698 GCAACCCAAGGTTACTGAATTAATGAA 60.525 37.037 0.00 0.00 45.01 2.57
2963 12545 8.531146 CAACCCAAGGTTACTGAATTAATGAAT 58.469 33.333 0.00 0.00 45.01 2.57
2964 12546 8.066612 ACCCAAGGTTACTGAATTAATGAATG 57.933 34.615 0.00 0.00 27.29 2.67
2965 12547 7.893302 ACCCAAGGTTACTGAATTAATGAATGA 59.107 33.333 0.00 0.00 27.29 2.57
2966 12548 8.408601 CCCAAGGTTACTGAATTAATGAATGAG 58.591 37.037 0.00 0.00 0.00 2.90
2967 12549 7.917505 CCAAGGTTACTGAATTAATGAATGAGC 59.082 37.037 0.00 0.00 0.00 4.26
2968 12550 8.461222 CAAGGTTACTGAATTAATGAATGAGCA 58.539 33.333 0.00 0.00 0.00 4.26
2969 12551 8.218338 AGGTTACTGAATTAATGAATGAGCAG 57.782 34.615 0.00 0.00 0.00 4.24
2970 12552 7.831193 AGGTTACTGAATTAATGAATGAGCAGT 59.169 33.333 0.00 0.00 36.98 4.40
2971 12553 8.462016 GGTTACTGAATTAATGAATGAGCAGTT 58.538 33.333 10.03 0.00 35.78 3.16
2972 12554 9.282247 GTTACTGAATTAATGAATGAGCAGTTG 57.718 33.333 10.03 0.00 35.78 3.16
2973 12555 7.458409 ACTGAATTAATGAATGAGCAGTTGT 57.542 32.000 0.00 0.00 32.90 3.32
2974 12556 7.310664 ACTGAATTAATGAATGAGCAGTTGTG 58.689 34.615 0.00 0.00 32.90 3.33
2975 12557 7.040201 ACTGAATTAATGAATGAGCAGTTGTGT 60.040 33.333 0.00 0.00 32.90 3.72
2976 12558 7.085746 TGAATTAATGAATGAGCAGTTGTGTG 58.914 34.615 0.00 0.00 0.00 3.82
2977 12559 3.293311 AATGAATGAGCAGTTGTGTGC 57.707 42.857 0.00 0.00 44.35 4.57
2981 12563 1.893335 TGAGCAGTTGTGTGCGCAT 60.893 52.632 15.91 0.00 46.63 4.73
2982 12564 2.120355 TGAGCAGTTGTGTGCGCATG 62.120 55.000 15.91 7.88 46.63 4.06
2983 12565 2.332514 GCAGTTGTGTGCGCATGT 59.667 55.556 15.91 0.00 32.74 3.21
2984 12566 1.573932 GCAGTTGTGTGCGCATGTA 59.426 52.632 15.91 0.00 32.74 2.29
2985 12567 0.040514 GCAGTTGTGTGCGCATGTAA 60.041 50.000 15.91 6.19 32.74 2.41
2986 12568 1.673760 CAGTTGTGTGCGCATGTAAC 58.326 50.000 15.91 18.26 0.00 2.50
2987 12569 0.591170 AGTTGTGTGCGCATGTAACC 59.409 50.000 15.91 0.00 0.00 2.85
2988 12570 0.724453 GTTGTGTGCGCATGTAACCG 60.724 55.000 15.91 0.00 0.00 4.44
2989 12571 0.880718 TTGTGTGCGCATGTAACCGA 60.881 50.000 15.91 0.00 0.00 4.69
2990 12572 1.131826 GTGTGCGCATGTAACCGAC 59.868 57.895 15.91 0.00 0.00 4.79
2991 12573 2.376538 TGTGCGCATGTAACCGACG 61.377 57.895 15.91 0.00 0.00 5.12
2992 12574 2.048970 TGCGCATGTAACCGACGT 60.049 55.556 5.66 0.00 0.00 4.34
2993 12575 2.376538 TGCGCATGTAACCGACGTG 61.377 57.895 5.66 0.00 46.36 4.49
2994 12576 3.077705 CGCATGTAACCGACGTGG 58.922 61.111 0.00 0.00 44.16 4.94
2995 12577 1.444724 CGCATGTAACCGACGTGGA 60.445 57.895 10.46 0.00 44.16 4.02
2996 12578 1.009903 CGCATGTAACCGACGTGGAA 61.010 55.000 10.46 0.00 44.16 3.53
2997 12579 1.149987 GCATGTAACCGACGTGGAAA 58.850 50.000 10.46 0.00 44.16 3.13
2998 12580 1.735571 GCATGTAACCGACGTGGAAAT 59.264 47.619 10.46 0.79 44.16 2.17
2999 12581 2.931325 GCATGTAACCGACGTGGAAATA 59.069 45.455 10.46 0.02 44.16 1.40
3000 12582 3.000925 GCATGTAACCGACGTGGAAATAG 59.999 47.826 10.46 0.00 44.16 1.73
3001 12583 4.426416 CATGTAACCGACGTGGAAATAGA 58.574 43.478 10.46 1.65 40.83 1.98
3002 12584 4.100707 TGTAACCGACGTGGAAATAGAG 57.899 45.455 10.46 0.00 42.00 2.43
3003 12585 2.005971 AACCGACGTGGAAATAGAGC 57.994 50.000 10.46 0.00 42.00 4.09
3004 12586 0.892755 ACCGACGTGGAAATAGAGCA 59.107 50.000 10.46 0.00 42.00 4.26
3005 12587 1.135083 ACCGACGTGGAAATAGAGCAG 60.135 52.381 10.46 0.00 42.00 4.24
3006 12588 1.560923 CGACGTGGAAATAGAGCAGG 58.439 55.000 0.00 0.00 0.00 4.85
3007 12589 1.291132 GACGTGGAAATAGAGCAGGC 58.709 55.000 0.00 0.00 0.00 4.85
3008 12590 0.107654 ACGTGGAAATAGAGCAGGCC 60.108 55.000 0.00 0.00 0.00 5.19
3009 12591 0.815615 CGTGGAAATAGAGCAGGCCC 60.816 60.000 0.00 0.00 0.00 5.80
3010 12592 0.548510 GTGGAAATAGAGCAGGCCCT 59.451 55.000 0.00 0.00 0.00 5.19
3011 12593 1.064389 GTGGAAATAGAGCAGGCCCTT 60.064 52.381 0.00 0.00 0.00 3.95
3012 12594 1.640670 TGGAAATAGAGCAGGCCCTTT 59.359 47.619 0.00 0.00 0.00 3.11
3013 12595 2.042979 TGGAAATAGAGCAGGCCCTTTT 59.957 45.455 0.00 0.00 0.00 2.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 20 1.832366 GTCCCTCAGTCTTTAGTCCCC 59.168 57.143 0.00 0.00 0.00 4.81
31 34 6.180472 TGTCCTTCATTAGATTTTGTCCCTC 58.820 40.000 0.00 0.00 0.00 4.30
42 48 9.912634 GTTTTTCATTTGATGTCCTTCATTAGA 57.087 29.630 0.00 0.00 36.83 2.10
227 233 1.748493 GTGTTTTGGGTTCAGCAGTCA 59.252 47.619 0.00 0.00 0.00 3.41
292 4400 3.141398 TCAGGGCTAGTATTACGTACCG 58.859 50.000 0.00 0.00 33.58 4.02
332 4565 1.885887 GCCACCATGAACTGCAGTTTA 59.114 47.619 31.58 27.87 38.56 2.01
363 4596 5.047377 TGGCATAGTCCTTGATTGGTTTTTC 60.047 40.000 0.00 0.00 0.00 2.29
376 4610 4.716784 TGTAACTGAAGATGGCATAGTCCT 59.283 41.667 0.00 0.00 0.00 3.85
488 4722 9.629878 TTTCAGTAACTTGTTATGTCCCTTTTA 57.370 29.630 0.00 0.00 0.00 1.52
515 4749 4.941263 AGAAAGCCCCAACTTTTTCAAAAC 59.059 37.500 0.00 0.00 39.93 2.43
527 4761 1.039856 GTTGCAGAAGAAAGCCCCAA 58.960 50.000 0.00 0.00 0.00 4.12
538 4774 0.383949 GAAAACAGCCCGTTGCAGAA 59.616 50.000 0.00 0.00 44.83 3.02
575 4854 0.548031 TCTCCCCAGCAGCAAATAGG 59.452 55.000 0.00 0.00 0.00 2.57
587 4866 2.587060 ATTACCAGGTCATCTCCCCA 57.413 50.000 0.00 0.00 0.00 4.96
602 4881 3.303395 GCTTCTGCCGCAGACAATATTAC 60.303 47.826 22.82 2.98 40.46 1.89
604 4883 1.672881 GCTTCTGCCGCAGACAATATT 59.327 47.619 22.82 0.00 40.46 1.28
607 4886 0.607489 AAGCTTCTGCCGCAGACAAT 60.607 50.000 22.82 8.45 40.46 2.71
659 6480 2.358247 GTGCACGACCCAACGGAT 60.358 61.111 0.00 0.00 37.61 4.18
660 6481 4.953868 CGTGCACGACCCAACGGA 62.954 66.667 34.93 0.00 43.02 4.69
662 6483 3.995669 CACGTGCACGACCCAACG 61.996 66.667 42.94 16.86 43.02 4.10
664 6485 3.800685 CTCCACGTGCACGACCCAA 62.801 63.158 42.94 21.83 43.02 4.12
665 6486 4.293648 CTCCACGTGCACGACCCA 62.294 66.667 42.94 22.38 43.02 4.51
678 6722 4.671590 TCCACCGCTCGTCCTCCA 62.672 66.667 0.00 0.00 0.00 3.86
708 6752 1.755393 AACTTGGCCCGTCGTCTCTT 61.755 55.000 0.00 0.00 0.00 2.85
725 6769 2.589442 TGCACGACCCAACGGAAC 60.589 61.111 0.00 0.00 37.61 3.62
748 6839 0.179234 TTGTGTCACATGGACCACGT 59.821 50.000 6.48 0.00 46.38 4.49
749 6840 1.197492 CATTGTGTCACATGGACCACG 59.803 52.381 6.48 0.00 46.38 4.94
750 6841 2.229792 ACATTGTGTCACATGGACCAC 58.770 47.619 6.48 7.62 46.38 4.16
751 6842 2.655090 ACATTGTGTCACATGGACCA 57.345 45.000 6.48 0.00 46.38 4.02
752 6843 2.415168 CGTACATTGTGTCACATGGACC 59.585 50.000 17.79 4.64 46.38 4.46
758 6849 0.946700 CCGCCGTACATTGTGTCACA 60.947 55.000 0.18 0.18 0.00 3.58
762 6853 3.115892 CGCCGCCGTACATTGTGT 61.116 61.111 0.00 0.00 0.00 3.72
808 7738 4.499183 CTGACGAGAGCCAATCTTTAACT 58.501 43.478 0.00 0.00 38.84 2.24
843 8175 3.135994 GTTTCTTTTCTGGCGACCACTA 58.864 45.455 0.00 0.00 0.00 2.74
844 8176 1.947456 GTTTCTTTTCTGGCGACCACT 59.053 47.619 0.00 0.00 0.00 4.00
845 8177 1.001706 GGTTTCTTTTCTGGCGACCAC 60.002 52.381 0.00 0.00 0.00 4.16
874 8206 3.038280 TCCTTTCATTGGATCGCTAGGA 58.962 45.455 0.00 0.00 0.00 2.94
876 8208 4.327982 TCTCCTTTCATTGGATCGCTAG 57.672 45.455 0.00 0.00 32.56 3.42
877 8209 4.081142 TGTTCTCCTTTCATTGGATCGCTA 60.081 41.667 0.00 0.00 32.56 4.26
878 8210 3.274288 GTTCTCCTTTCATTGGATCGCT 58.726 45.455 0.00 0.00 32.56 4.93
880 8212 6.283694 TCTATGTTCTCCTTTCATTGGATCG 58.716 40.000 0.00 0.00 32.56 3.69
881 8213 9.956640 ATATCTATGTTCTCCTTTCATTGGATC 57.043 33.333 0.00 0.00 32.56 3.36
916 8268 2.691409 TGAATCGAGTTCATCCCCAC 57.309 50.000 6.28 0.00 41.79 4.61
964 8385 3.499157 CCAACAAAGGAAACGAACCGATA 59.501 43.478 0.00 0.00 0.00 2.92
966 8387 1.671845 CCAACAAAGGAAACGAACCGA 59.328 47.619 0.00 0.00 0.00 4.69
967 8388 1.268845 CCCAACAAAGGAAACGAACCG 60.269 52.381 0.00 0.00 0.00 4.44
968 8389 1.067974 CCCCAACAAAGGAAACGAACC 59.932 52.381 0.00 0.00 0.00 3.62
969 8390 2.025898 TCCCCAACAAAGGAAACGAAC 58.974 47.619 0.00 0.00 0.00 3.95
972 8393 0.309612 CGTCCCCAACAAAGGAAACG 59.690 55.000 0.00 0.00 32.81 3.60
973 8394 1.682740 TCGTCCCCAACAAAGGAAAC 58.317 50.000 0.00 0.00 32.81 2.78
975 8396 2.613474 CGTATCGTCCCCAACAAAGGAA 60.613 50.000 0.00 0.00 32.81 3.36
976 8397 1.066716 CGTATCGTCCCCAACAAAGGA 60.067 52.381 0.00 0.00 0.00 3.36
977 8398 1.066716 TCGTATCGTCCCCAACAAAGG 60.067 52.381 0.00 0.00 0.00 3.11
978 8399 1.997606 GTCGTATCGTCCCCAACAAAG 59.002 52.381 0.00 0.00 0.00 2.77
979 8400 1.338011 GGTCGTATCGTCCCCAACAAA 60.338 52.381 0.00 0.00 0.00 2.83
980 8401 0.247185 GGTCGTATCGTCCCCAACAA 59.753 55.000 0.00 0.00 0.00 2.83
982 8403 0.462789 ATGGTCGTATCGTCCCCAAC 59.537 55.000 3.47 0.00 34.44 3.77
983 8404 0.462375 CATGGTCGTATCGTCCCCAA 59.538 55.000 3.47 0.00 34.44 4.12
985 8406 1.111116 TCCATGGTCGTATCGTCCCC 61.111 60.000 12.58 0.00 34.44 4.81
986 8407 0.031721 GTCCATGGTCGTATCGTCCC 59.968 60.000 12.58 0.00 34.44 4.46
987 8408 1.001597 GAGTCCATGGTCGTATCGTCC 60.002 57.143 12.58 0.00 35.78 4.79
1038 8539 0.962855 CTCTGGTCGGCAGACTCAGA 60.963 60.000 24.86 24.86 44.57 3.27
1324 10657 1.039856 ACAGGCCAATTTTTGACGCT 58.960 45.000 5.01 0.00 0.00 5.07
1414 10747 2.769095 TGCCATACATGTGCCAGTAGTA 59.231 45.455 9.11 0.00 0.00 1.82
1566 10899 2.590092 GCGGCATAGGGGAACAGT 59.410 61.111 0.00 0.00 0.00 3.55
1654 10996 0.968901 AGTATCCTGTTCGGCGACCA 60.969 55.000 10.16 8.40 0.00 4.02
1662 11004 5.892568 ACGTCAATCACTAGTATCCTGTTC 58.107 41.667 0.00 0.00 0.00 3.18
1688 11030 3.927548 TGCAGTGTGCCTCGCTCA 61.928 61.111 0.00 0.00 44.23 4.26
1728 11071 1.807165 CATGGCCTGACTCGTCGTG 60.807 63.158 3.32 0.00 0.00 4.35
1828 11171 0.988832 TGGAGGTGTGGACCCAATAC 59.011 55.000 0.00 0.00 44.40 1.89
1829 11172 1.563879 CATGGAGGTGTGGACCCAATA 59.436 52.381 0.00 0.00 44.40 1.90
1886 11412 7.221259 CCATGTCGTCGATGTAAAAGTTGTATA 59.779 37.037 4.21 0.00 0.00 1.47
1887 11413 6.035650 CCATGTCGTCGATGTAAAAGTTGTAT 59.964 38.462 4.21 0.00 0.00 2.29
1924 11450 1.483316 GGCTGGTTGCGTTTGTTTAC 58.517 50.000 0.00 0.00 44.05 2.01
2013 11539 6.601613 TCTTATTCTTGTGTTTGTTGGTGTCT 59.398 34.615 0.00 0.00 0.00 3.41
2026 11552 4.806247 CCCTAGTCGCTTCTTATTCTTGTG 59.194 45.833 0.00 0.00 0.00 3.33
2254 11818 0.517316 AAGTGGCGTTTCTTCGATGC 59.483 50.000 0.00 0.00 0.00 3.91
2286 11850 0.747644 CTGTGCCATCGGTGCCATTA 60.748 55.000 0.00 0.00 0.00 1.90
2337 11908 1.700739 AGGTTGGATTACCGTGTTGGA 59.299 47.619 0.00 0.00 43.21 3.53
2408 11986 9.862149 AAGAAAGAGAAAGGGTGAATAGTTTTA 57.138 29.630 0.00 0.00 0.00 1.52
2411 11989 7.445707 GTCAAGAAAGAGAAAGGGTGAATAGTT 59.554 37.037 0.00 0.00 0.00 2.24
2426 12004 8.807667 AAATGTAAAATGCTGTCAAGAAAGAG 57.192 30.769 0.00 0.00 0.00 2.85
2526 12108 4.651778 ACCTGTACTTGTGTGCATAATGT 58.348 39.130 0.00 0.00 38.09 2.71
2544 12126 2.496470 GGAGTACTAGACCACCAACCTG 59.504 54.545 0.00 0.00 0.00 4.00
2601 12183 8.391222 GAGTTTGCTCAATCATCTCGTCGATG 62.391 46.154 0.00 0.00 44.13 3.84
2602 12184 3.443099 TTGCTCAATCATCTCGTCGAT 57.557 42.857 0.00 0.00 0.00 3.59
2603 12185 2.923655 GTTTGCTCAATCATCTCGTCGA 59.076 45.455 0.00 0.00 0.00 4.20
2604 12186 2.926200 AGTTTGCTCAATCATCTCGTCG 59.074 45.455 0.00 0.00 0.00 5.12
2605 12187 3.000277 CGAGTTTGCTCAATCATCTCGTC 60.000 47.826 0.00 0.00 41.71 4.20
2606 12188 2.926200 CGAGTTTGCTCAATCATCTCGT 59.074 45.455 0.00 0.00 41.71 4.18
2607 12189 2.285486 GCGAGTTTGCTCAATCATCTCG 60.285 50.000 0.00 0.00 41.71 4.04
2608 12190 2.935201 AGCGAGTTTGCTCAATCATCTC 59.065 45.455 0.00 0.00 42.95 2.75
2609 12191 2.983229 AGCGAGTTTGCTCAATCATCT 58.017 42.857 0.00 0.00 42.95 2.90
2610 12192 3.754188 AAGCGAGTTTGCTCAATCATC 57.246 42.857 0.00 0.00 46.60 2.92
2611 12193 3.366679 CCAAAGCGAGTTTGCTCAATCAT 60.367 43.478 5.40 0.00 46.60 2.45
2612 12194 2.030893 CCAAAGCGAGTTTGCTCAATCA 60.031 45.455 5.40 0.00 46.60 2.57
2613 12195 2.226437 TCCAAAGCGAGTTTGCTCAATC 59.774 45.455 5.40 0.00 46.60 2.67
2614 12196 2.229792 TCCAAAGCGAGTTTGCTCAAT 58.770 42.857 5.40 0.00 46.60 2.57
2615 12197 1.674359 TCCAAAGCGAGTTTGCTCAA 58.326 45.000 5.40 0.00 46.60 3.02
2616 12198 1.603802 CTTCCAAAGCGAGTTTGCTCA 59.396 47.619 5.40 0.00 46.60 4.26
2617 12199 1.068954 CCTTCCAAAGCGAGTTTGCTC 60.069 52.381 5.40 0.00 46.60 4.26
2619 12201 0.039165 CCCTTCCAAAGCGAGTTTGC 60.039 55.000 5.40 0.00 43.82 3.68
2620 12202 1.266989 GTCCCTTCCAAAGCGAGTTTG 59.733 52.381 4.19 4.19 44.64 2.93
2621 12203 1.605753 GTCCCTTCCAAAGCGAGTTT 58.394 50.000 0.00 0.00 0.00 2.66
2622 12204 0.250770 GGTCCCTTCCAAAGCGAGTT 60.251 55.000 0.00 0.00 0.00 3.01
2623 12205 1.375326 GGTCCCTTCCAAAGCGAGT 59.625 57.895 0.00 0.00 0.00 4.18
2624 12206 1.741770 CGGTCCCTTCCAAAGCGAG 60.742 63.158 0.00 0.00 36.07 5.03
2625 12207 2.345991 CGGTCCCTTCCAAAGCGA 59.654 61.111 0.00 0.00 36.07 4.93
2626 12208 2.032071 ACGGTCCCTTCCAAAGCG 59.968 61.111 0.00 0.00 39.60 4.68
2627 12209 2.033194 CGACGGTCCCTTCCAAAGC 61.033 63.158 1.91 0.00 0.00 3.51
2628 12210 1.375523 CCGACGGTCCCTTCCAAAG 60.376 63.158 5.48 0.00 0.00 2.77
2629 12211 1.698067 AACCGACGGTCCCTTCCAAA 61.698 55.000 22.00 0.00 33.12 3.28
2630 12212 2.142104 AACCGACGGTCCCTTCCAA 61.142 57.895 22.00 0.00 33.12 3.53
2631 12213 2.524887 AACCGACGGTCCCTTCCA 60.525 61.111 22.00 0.00 33.12 3.53
2632 12214 2.047560 CAACCGACGGTCCCTTCC 60.048 66.667 22.00 0.00 33.12 3.46
2633 12215 1.080025 CTCAACCGACGGTCCCTTC 60.080 63.158 22.00 0.00 33.12 3.46
2634 12216 2.580601 CCTCAACCGACGGTCCCTT 61.581 63.158 22.00 0.51 33.12 3.95
2635 12217 2.995574 CCTCAACCGACGGTCCCT 60.996 66.667 22.00 0.96 33.12 4.20
2636 12218 2.993264 TCCTCAACCGACGGTCCC 60.993 66.667 22.00 0.00 33.12 4.46
2637 12219 1.530013 TTCTCCTCAACCGACGGTCC 61.530 60.000 22.00 0.00 33.12 4.46
2638 12220 0.316204 TTTCTCCTCAACCGACGGTC 59.684 55.000 22.00 0.00 33.12 4.79
2639 12221 0.754472 TTTTCTCCTCAACCGACGGT 59.246 50.000 15.37 15.37 37.65 4.83
2640 12222 1.429463 CTTTTCTCCTCAACCGACGG 58.571 55.000 13.61 13.61 0.00 4.79
2641 12223 1.270147 ACCTTTTCTCCTCAACCGACG 60.270 52.381 0.00 0.00 0.00 5.12
2642 12224 2.545537 ACCTTTTCTCCTCAACCGAC 57.454 50.000 0.00 0.00 0.00 4.79
2643 12225 3.644738 ACTAACCTTTTCTCCTCAACCGA 59.355 43.478 0.00 0.00 0.00 4.69
2644 12226 3.995048 GACTAACCTTTTCTCCTCAACCG 59.005 47.826 0.00 0.00 0.00 4.44
2645 12227 4.969484 TGACTAACCTTTTCTCCTCAACC 58.031 43.478 0.00 0.00 0.00 3.77
2646 12228 6.231211 TCATGACTAACCTTTTCTCCTCAAC 58.769 40.000 0.00 0.00 0.00 3.18
2647 12229 6.270000 TCTCATGACTAACCTTTTCTCCTCAA 59.730 38.462 0.00 0.00 0.00 3.02
2648 12230 5.780282 TCTCATGACTAACCTTTTCTCCTCA 59.220 40.000 0.00 0.00 0.00 3.86
2649 12231 6.287589 TCTCATGACTAACCTTTTCTCCTC 57.712 41.667 0.00 0.00 0.00 3.71
2650 12232 6.688073 TTCTCATGACTAACCTTTTCTCCT 57.312 37.500 0.00 0.00 0.00 3.69
2651 12233 9.267084 GATATTCTCATGACTAACCTTTTCTCC 57.733 37.037 0.00 0.00 0.00 3.71
2653 12235 9.829507 CAGATATTCTCATGACTAACCTTTTCT 57.170 33.333 0.00 0.00 0.00 2.52
2654 12236 9.823647 TCAGATATTCTCATGACTAACCTTTTC 57.176 33.333 0.00 0.00 0.00 2.29
2656 12238 9.606631 GTTCAGATATTCTCATGACTAACCTTT 57.393 33.333 0.00 0.00 0.00 3.11
2657 12239 8.986991 AGTTCAGATATTCTCATGACTAACCTT 58.013 33.333 0.00 0.00 0.00 3.50
2658 12240 8.546083 AGTTCAGATATTCTCATGACTAACCT 57.454 34.615 0.00 0.00 0.00 3.50
2663 12245 7.877097 GCCAATAGTTCAGATATTCTCATGACT 59.123 37.037 0.00 0.00 0.00 3.41
2664 12246 7.658982 TGCCAATAGTTCAGATATTCTCATGAC 59.341 37.037 0.00 0.00 0.00 3.06
2665 12247 7.738847 TGCCAATAGTTCAGATATTCTCATGA 58.261 34.615 0.00 0.00 0.00 3.07
2666 12248 7.974482 TGCCAATAGTTCAGATATTCTCATG 57.026 36.000 0.00 0.00 0.00 3.07
2667 12249 7.664731 CCTTGCCAATAGTTCAGATATTCTCAT 59.335 37.037 0.00 0.00 0.00 2.90
2668 12250 6.994496 CCTTGCCAATAGTTCAGATATTCTCA 59.006 38.462 0.00 0.00 0.00 3.27
2669 12251 6.429385 CCCTTGCCAATAGTTCAGATATTCTC 59.571 42.308 0.00 0.00 0.00 2.87
2670 12252 6.101734 TCCCTTGCCAATAGTTCAGATATTCT 59.898 38.462 0.00 0.00 0.00 2.40
2671 12253 6.299141 TCCCTTGCCAATAGTTCAGATATTC 58.701 40.000 0.00 0.00 0.00 1.75
2672 12254 6.266131 TCCCTTGCCAATAGTTCAGATATT 57.734 37.500 0.00 0.00 0.00 1.28
2673 12255 5.222007 CCTCCCTTGCCAATAGTTCAGATAT 60.222 44.000 0.00 0.00 0.00 1.63
2674 12256 4.103153 CCTCCCTTGCCAATAGTTCAGATA 59.897 45.833 0.00 0.00 0.00 1.98
2675 12257 3.117738 CCTCCCTTGCCAATAGTTCAGAT 60.118 47.826 0.00 0.00 0.00 2.90
2676 12258 2.239654 CCTCCCTTGCCAATAGTTCAGA 59.760 50.000 0.00 0.00 0.00 3.27
2677 12259 2.239654 TCCTCCCTTGCCAATAGTTCAG 59.760 50.000 0.00 0.00 0.00 3.02
2678 12260 2.274542 TCCTCCCTTGCCAATAGTTCA 58.725 47.619 0.00 0.00 0.00 3.18
2679 12261 3.282885 CTTCCTCCCTTGCCAATAGTTC 58.717 50.000 0.00 0.00 0.00 3.01
2680 12262 2.621668 GCTTCCTCCCTTGCCAATAGTT 60.622 50.000 0.00 0.00 0.00 2.24
2681 12263 1.064389 GCTTCCTCCCTTGCCAATAGT 60.064 52.381 0.00 0.00 0.00 2.12
2682 12264 1.064463 TGCTTCCTCCCTTGCCAATAG 60.064 52.381 0.00 0.00 0.00 1.73
2683 12265 0.998928 TGCTTCCTCCCTTGCCAATA 59.001 50.000 0.00 0.00 0.00 1.90
2684 12266 0.114954 TTGCTTCCTCCCTTGCCAAT 59.885 50.000 0.00 0.00 0.00 3.16
2685 12267 0.114954 ATTGCTTCCTCCCTTGCCAA 59.885 50.000 0.00 0.00 0.00 4.52
2686 12268 0.612732 CATTGCTTCCTCCCTTGCCA 60.613 55.000 0.00 0.00 0.00 4.92
2687 12269 1.325476 CCATTGCTTCCTCCCTTGCC 61.325 60.000 0.00 0.00 0.00 4.52
2688 12270 0.323725 TCCATTGCTTCCTCCCTTGC 60.324 55.000 0.00 0.00 0.00 4.01
2689 12271 2.220653 TTCCATTGCTTCCTCCCTTG 57.779 50.000 0.00 0.00 0.00 3.61
2690 12272 2.999185 TTTCCATTGCTTCCTCCCTT 57.001 45.000 0.00 0.00 0.00 3.95
2691 12273 2.999185 TTTTCCATTGCTTCCTCCCT 57.001 45.000 0.00 0.00 0.00 4.20
2692 12274 5.419542 GTTATTTTTCCATTGCTTCCTCCC 58.580 41.667 0.00 0.00 0.00 4.30
2693 12275 5.102313 CGTTATTTTTCCATTGCTTCCTCC 58.898 41.667 0.00 0.00 0.00 4.30
2694 12276 5.709966 ACGTTATTTTTCCATTGCTTCCTC 58.290 37.500 0.00 0.00 0.00 3.71
2695 12277 5.722021 ACGTTATTTTTCCATTGCTTCCT 57.278 34.783 0.00 0.00 0.00 3.36
2696 12278 5.347635 GGAACGTTATTTTTCCATTGCTTCC 59.652 40.000 0.00 0.00 41.01 3.46
2697 12279 5.347635 GGGAACGTTATTTTTCCATTGCTTC 59.652 40.000 0.00 0.00 42.85 3.86
2698 12280 5.234752 GGGAACGTTATTTTTCCATTGCTT 58.765 37.500 0.00 0.00 42.85 3.91
2699 12281 4.816392 GGGAACGTTATTTTTCCATTGCT 58.184 39.130 0.00 0.00 42.85 3.91
2716 12298 2.750237 GCCACATCACCCGGGAAC 60.750 66.667 32.02 2.59 0.00 3.62
2717 12299 2.933287 AGCCACATCACCCGGGAA 60.933 61.111 32.02 15.97 0.00 3.97
2718 12300 3.399181 GAGCCACATCACCCGGGA 61.399 66.667 32.02 5.69 0.00 5.14
2719 12301 3.391665 GAGAGCCACATCACCCGGG 62.392 68.421 22.25 22.25 0.00 5.73
2720 12302 2.187946 GAGAGCCACATCACCCGG 59.812 66.667 0.00 0.00 0.00 5.73
2721 12303 1.153489 CAGAGAGCCACATCACCCG 60.153 63.158 0.00 0.00 0.00 5.28
2722 12304 0.177604 CTCAGAGAGCCACATCACCC 59.822 60.000 0.00 0.00 0.00 4.61
2723 12305 0.177604 CCTCAGAGAGCCACATCACC 59.822 60.000 0.00 0.00 0.00 4.02
2724 12306 0.177604 CCCTCAGAGAGCCACATCAC 59.822 60.000 0.00 0.00 0.00 3.06
2725 12307 0.252421 ACCCTCAGAGAGCCACATCA 60.252 55.000 0.00 0.00 0.00 3.07
2726 12308 0.177604 CACCCTCAGAGAGCCACATC 59.822 60.000 0.00 0.00 0.00 3.06
2727 12309 0.252421 TCACCCTCAGAGAGCCACAT 60.252 55.000 0.00 0.00 0.00 3.21
2728 12310 1.156095 TCACCCTCAGAGAGCCACA 59.844 57.895 0.00 0.00 0.00 4.17
2729 12311 1.594310 GTCACCCTCAGAGAGCCAC 59.406 63.158 0.00 0.00 0.00 5.01
2730 12312 1.610673 GGTCACCCTCAGAGAGCCA 60.611 63.158 0.00 0.00 0.00 4.75
2731 12313 2.716017 CGGTCACCCTCAGAGAGCC 61.716 68.421 0.00 0.00 0.00 4.70
2732 12314 0.680280 TACGGTCACCCTCAGAGAGC 60.680 60.000 0.00 0.00 0.00 4.09
2733 12315 1.473278 GTTACGGTCACCCTCAGAGAG 59.527 57.143 0.00 0.00 0.00 3.20
2734 12316 1.202964 TGTTACGGTCACCCTCAGAGA 60.203 52.381 0.00 0.00 0.00 3.10
2735 12317 1.067776 GTGTTACGGTCACCCTCAGAG 60.068 57.143 0.00 0.00 0.00 3.35
2736 12318 0.963962 GTGTTACGGTCACCCTCAGA 59.036 55.000 0.00 0.00 0.00 3.27
2737 12319 0.388134 CGTGTTACGGTCACCCTCAG 60.388 60.000 0.00 0.00 38.08 3.35
2738 12320 1.661480 CGTGTTACGGTCACCCTCA 59.339 57.895 0.00 0.00 38.08 3.86
2739 12321 4.565531 CGTGTTACGGTCACCCTC 57.434 61.111 0.00 0.00 38.08 4.30
2748 12330 1.504359 TGAAAGAAGCCCGTGTTACG 58.496 50.000 0.00 0.00 42.11 3.18
2749 12331 2.414161 GCATGAAAGAAGCCCGTGTTAC 60.414 50.000 0.00 0.00 0.00 2.50
2750 12332 1.810151 GCATGAAAGAAGCCCGTGTTA 59.190 47.619 0.00 0.00 0.00 2.41
2751 12333 0.598065 GCATGAAAGAAGCCCGTGTT 59.402 50.000 0.00 0.00 0.00 3.32
2752 12334 1.577328 CGCATGAAAGAAGCCCGTGT 61.577 55.000 0.00 0.00 0.00 4.49
2753 12335 1.135315 CGCATGAAAGAAGCCCGTG 59.865 57.895 0.00 0.00 0.00 4.94
2754 12336 2.690778 GCGCATGAAAGAAGCCCGT 61.691 57.895 0.30 0.00 0.00 5.28
2755 12337 2.100991 GCGCATGAAAGAAGCCCG 59.899 61.111 0.30 0.00 0.00 6.13
2756 12338 0.038343 TTTGCGCATGAAAGAAGCCC 60.038 50.000 12.75 0.00 0.00 5.19
2757 12339 1.063031 GTTTGCGCATGAAAGAAGCC 58.937 50.000 12.75 0.00 0.00 4.35
2758 12340 1.769733 TGTTTGCGCATGAAAGAAGC 58.230 45.000 12.75 0.00 0.00 3.86
2759 12341 3.182972 CCTTTGTTTGCGCATGAAAGAAG 59.817 43.478 25.94 17.92 0.00 2.85
2760 12342 3.122297 CCTTTGTTTGCGCATGAAAGAA 58.878 40.909 25.94 15.35 0.00 2.52
2761 12343 2.360483 TCCTTTGTTTGCGCATGAAAGA 59.640 40.909 25.94 10.91 0.00 2.52
2762 12344 2.741612 TCCTTTGTTTGCGCATGAAAG 58.258 42.857 12.75 18.43 0.00 2.62
2763 12345 2.879002 TCCTTTGTTTGCGCATGAAA 57.121 40.000 12.75 9.79 0.00 2.69
2764 12346 2.879002 TTCCTTTGTTTGCGCATGAA 57.121 40.000 12.75 0.00 0.00 2.57
2765 12347 2.545532 CCTTTCCTTTGTTTGCGCATGA 60.546 45.455 12.75 0.00 0.00 3.07
2766 12348 1.794116 CCTTTCCTTTGTTTGCGCATG 59.206 47.619 12.75 0.00 0.00 4.06
2767 12349 1.270252 CCCTTTCCTTTGTTTGCGCAT 60.270 47.619 12.75 0.00 0.00 4.73
2768 12350 0.103937 CCCTTTCCTTTGTTTGCGCA 59.896 50.000 5.66 5.66 0.00 6.09
2769 12351 1.221466 GCCCTTTCCTTTGTTTGCGC 61.221 55.000 0.00 0.00 0.00 6.09
2770 12352 0.103937 TGCCCTTTCCTTTGTTTGCG 59.896 50.000 0.00 0.00 0.00 4.85
2771 12353 1.581934 GTGCCCTTTCCTTTGTTTGC 58.418 50.000 0.00 0.00 0.00 3.68
2772 12354 1.136110 ACGTGCCCTTTCCTTTGTTTG 59.864 47.619 0.00 0.00 0.00 2.93
2773 12355 1.136110 CACGTGCCCTTTCCTTTGTTT 59.864 47.619 0.82 0.00 0.00 2.83
2774 12356 0.744281 CACGTGCCCTTTCCTTTGTT 59.256 50.000 0.82 0.00 0.00 2.83
2775 12357 0.395173 ACACGTGCCCTTTCCTTTGT 60.395 50.000 17.22 0.00 0.00 2.83
2776 12358 1.600023 TACACGTGCCCTTTCCTTTG 58.400 50.000 17.22 0.00 0.00 2.77
2777 12359 2.351706 TTACACGTGCCCTTTCCTTT 57.648 45.000 17.22 0.00 0.00 3.11
2778 12360 1.951602 GTTTACACGTGCCCTTTCCTT 59.048 47.619 17.22 0.00 0.00 3.36
2779 12361 1.134037 TGTTTACACGTGCCCTTTCCT 60.134 47.619 17.22 0.00 0.00 3.36
2780 12362 1.310904 TGTTTACACGTGCCCTTTCC 58.689 50.000 17.22 0.00 0.00 3.13
2781 12363 2.614983 TCTTGTTTACACGTGCCCTTTC 59.385 45.455 17.22 2.36 0.00 2.62
2782 12364 2.645802 TCTTGTTTACACGTGCCCTTT 58.354 42.857 17.22 0.00 0.00 3.11
2783 12365 2.335316 TCTTGTTTACACGTGCCCTT 57.665 45.000 17.22 0.00 0.00 3.95
2784 12366 2.561478 ATCTTGTTTACACGTGCCCT 57.439 45.000 17.22 0.00 0.00 5.19
2785 12367 3.636282 AAATCTTGTTTACACGTGCCC 57.364 42.857 17.22 1.19 0.00 5.36
2786 12368 6.608610 AGATTAAATCTTGTTTACACGTGCC 58.391 36.000 17.22 1.58 35.76 5.01
2787 12369 7.519002 AGAGATTAAATCTTGTTTACACGTGC 58.481 34.615 17.22 0.00 40.38 5.34
2788 12370 9.530129 GAAGAGATTAAATCTTGTTTACACGTG 57.470 33.333 15.48 15.48 40.38 4.49
2789 12371 9.268268 TGAAGAGATTAAATCTTGTTTACACGT 57.732 29.630 10.18 0.00 40.38 4.49
2805 12387 9.919416 TGTTCCATTATCCAATTGAAGAGATTA 57.081 29.630 7.12 0.00 29.17 1.75
2806 12388 8.827832 TGTTCCATTATCCAATTGAAGAGATT 57.172 30.769 7.12 0.00 29.17 2.40
2807 12389 8.689972 GTTGTTCCATTATCCAATTGAAGAGAT 58.310 33.333 7.12 3.63 29.17 2.75
2808 12390 7.669304 TGTTGTTCCATTATCCAATTGAAGAGA 59.331 33.333 7.12 0.00 29.17 3.10
2809 12391 7.829725 TGTTGTTCCATTATCCAATTGAAGAG 58.170 34.615 7.12 0.00 29.17 2.85
2810 12392 7.773489 TGTTGTTCCATTATCCAATTGAAGA 57.227 32.000 7.12 0.00 29.17 2.87
2813 12395 9.868277 GTTATTGTTGTTCCATTATCCAATTGA 57.132 29.630 7.12 0.00 0.00 2.57
2814 12396 9.650539 TGTTATTGTTGTTCCATTATCCAATTG 57.349 29.630 0.00 0.00 0.00 2.32
2815 12397 9.874205 CTGTTATTGTTGTTCCATTATCCAATT 57.126 29.630 0.00 0.00 0.00 2.32
2816 12398 8.477256 CCTGTTATTGTTGTTCCATTATCCAAT 58.523 33.333 0.00 0.00 0.00 3.16
2817 12399 7.578571 GCCTGTTATTGTTGTTCCATTATCCAA 60.579 37.037 0.00 0.00 0.00 3.53
2818 12400 6.127479 GCCTGTTATTGTTGTTCCATTATCCA 60.127 38.462 0.00 0.00 0.00 3.41
2819 12401 6.273071 GCCTGTTATTGTTGTTCCATTATCC 58.727 40.000 0.00 0.00 0.00 2.59
2820 12402 6.127479 TGGCCTGTTATTGTTGTTCCATTATC 60.127 38.462 3.32 0.00 0.00 1.75
2821 12403 5.719085 TGGCCTGTTATTGTTGTTCCATTAT 59.281 36.000 3.32 0.00 0.00 1.28
2822 12404 5.080337 TGGCCTGTTATTGTTGTTCCATTA 58.920 37.500 3.32 0.00 0.00 1.90
2823 12405 3.900601 TGGCCTGTTATTGTTGTTCCATT 59.099 39.130 3.32 0.00 0.00 3.16
2824 12406 3.505386 TGGCCTGTTATTGTTGTTCCAT 58.495 40.909 3.32 0.00 0.00 3.41
2825 12407 2.890311 CTGGCCTGTTATTGTTGTTCCA 59.110 45.455 3.32 0.00 0.00 3.53
2826 12408 3.153919 TCTGGCCTGTTATTGTTGTTCC 58.846 45.455 3.32 0.00 0.00 3.62
2827 12409 3.821033 ACTCTGGCCTGTTATTGTTGTTC 59.179 43.478 3.32 0.00 0.00 3.18
2828 12410 3.569701 CACTCTGGCCTGTTATTGTTGTT 59.430 43.478 3.32 0.00 0.00 2.83
2829 12411 3.149196 CACTCTGGCCTGTTATTGTTGT 58.851 45.455 3.32 0.00 0.00 3.32
2830 12412 3.411446 TCACTCTGGCCTGTTATTGTTG 58.589 45.455 3.32 0.00 0.00 3.33
2831 12413 3.788227 TCACTCTGGCCTGTTATTGTT 57.212 42.857 3.32 0.00 0.00 2.83
2832 12414 3.073062 AGTTCACTCTGGCCTGTTATTGT 59.927 43.478 3.32 0.00 0.00 2.71
2833 12415 3.679389 AGTTCACTCTGGCCTGTTATTG 58.321 45.455 3.32 0.43 0.00 1.90
2834 12416 4.777896 TCTAGTTCACTCTGGCCTGTTATT 59.222 41.667 3.32 0.00 0.00 1.40
2835 12417 4.353777 TCTAGTTCACTCTGGCCTGTTAT 58.646 43.478 3.32 0.00 0.00 1.89
2836 12418 3.764434 CTCTAGTTCACTCTGGCCTGTTA 59.236 47.826 3.32 0.00 0.00 2.41
2837 12419 2.564947 CTCTAGTTCACTCTGGCCTGTT 59.435 50.000 3.32 0.00 0.00 3.16
2838 12420 2.175202 CTCTAGTTCACTCTGGCCTGT 58.825 52.381 3.32 0.00 0.00 4.00
2839 12421 1.480137 CCTCTAGTTCACTCTGGCCTG 59.520 57.143 3.32 2.92 0.00 4.85
2840 12422 1.359474 TCCTCTAGTTCACTCTGGCCT 59.641 52.381 3.32 0.00 0.00 5.19
2841 12423 1.853963 TCCTCTAGTTCACTCTGGCC 58.146 55.000 0.00 0.00 0.00 5.36
2842 12424 2.418060 GCTTCCTCTAGTTCACTCTGGC 60.418 54.545 0.00 0.00 0.00 4.85
2843 12425 3.096092 AGCTTCCTCTAGTTCACTCTGG 58.904 50.000 0.00 0.00 0.00 3.86
2844 12426 3.675775 GCAGCTTCCTCTAGTTCACTCTG 60.676 52.174 0.00 0.00 0.00 3.35
2845 12427 2.495669 GCAGCTTCCTCTAGTTCACTCT 59.504 50.000 0.00 0.00 0.00 3.24
2846 12428 2.418060 GGCAGCTTCCTCTAGTTCACTC 60.418 54.545 0.00 0.00 0.00 3.51
2847 12429 1.552792 GGCAGCTTCCTCTAGTTCACT 59.447 52.381 0.00 0.00 0.00 3.41
2848 12430 1.276421 TGGCAGCTTCCTCTAGTTCAC 59.724 52.381 3.45 0.00 0.00 3.18
2849 12431 1.644509 TGGCAGCTTCCTCTAGTTCA 58.355 50.000 3.45 0.00 0.00 3.18
2850 12432 2.626840 CTTGGCAGCTTCCTCTAGTTC 58.373 52.381 3.45 0.00 0.00 3.01
2851 12433 1.280421 CCTTGGCAGCTTCCTCTAGTT 59.720 52.381 3.45 0.00 0.00 2.24
2852 12434 0.908198 CCTTGGCAGCTTCCTCTAGT 59.092 55.000 3.45 0.00 0.00 2.57
2853 12435 1.198713 TCCTTGGCAGCTTCCTCTAG 58.801 55.000 3.45 0.00 0.00 2.43
2854 12436 1.885049 ATCCTTGGCAGCTTCCTCTA 58.115 50.000 3.45 0.00 0.00 2.43
2855 12437 0.998145 AATCCTTGGCAGCTTCCTCT 59.002 50.000 3.45 0.00 0.00 3.69
2856 12438 1.844687 AAATCCTTGGCAGCTTCCTC 58.155 50.000 3.45 0.00 0.00 3.71
2857 12439 2.315720 AAAATCCTTGGCAGCTTCCT 57.684 45.000 3.45 0.00 0.00 3.36
2858 12440 4.160252 TGATAAAAATCCTTGGCAGCTTCC 59.840 41.667 0.00 0.00 0.00 3.46
2859 12441 5.105595 ACTGATAAAAATCCTTGGCAGCTTC 60.106 40.000 0.00 0.00 0.00 3.86
2860 12442 4.774200 ACTGATAAAAATCCTTGGCAGCTT 59.226 37.500 0.00 0.00 0.00 3.74
2861 12443 4.347607 ACTGATAAAAATCCTTGGCAGCT 58.652 39.130 0.00 0.00 0.00 4.24
2862 12444 4.440663 GGACTGATAAAAATCCTTGGCAGC 60.441 45.833 0.00 0.00 0.00 5.25
2863 12445 4.952335 AGGACTGATAAAAATCCTTGGCAG 59.048 41.667 0.00 0.00 38.47 4.85
2864 12446 4.934356 AGGACTGATAAAAATCCTTGGCA 58.066 39.130 0.00 0.00 38.47 4.92
2869 12451 9.588096 AAGTAAACAAGGACTGATAAAAATCCT 57.412 29.630 0.00 0.00 43.66 3.24
2870 12452 9.841880 GAAGTAAACAAGGACTGATAAAAATCC 57.158 33.333 0.00 0.00 0.00 3.01
2873 12455 9.621629 TCTGAAGTAAACAAGGACTGATAAAAA 57.378 29.630 0.00 0.00 0.00 1.94
2874 12456 9.273016 CTCTGAAGTAAACAAGGACTGATAAAA 57.727 33.333 0.00 0.00 0.00 1.52
2875 12457 7.878127 CCTCTGAAGTAAACAAGGACTGATAAA 59.122 37.037 0.00 0.00 0.00 1.40
2876 12458 7.016268 ACCTCTGAAGTAAACAAGGACTGATAA 59.984 37.037 0.00 0.00 0.00 1.75
2877 12459 6.497259 ACCTCTGAAGTAAACAAGGACTGATA 59.503 38.462 0.00 0.00 0.00 2.15
2878 12460 5.308237 ACCTCTGAAGTAAACAAGGACTGAT 59.692 40.000 0.00 0.00 0.00 2.90
2879 12461 4.654262 ACCTCTGAAGTAAACAAGGACTGA 59.346 41.667 0.00 0.00 0.00 3.41
2880 12462 4.752101 CACCTCTGAAGTAAACAAGGACTG 59.248 45.833 0.00 0.00 0.00 3.51
2881 12463 4.654262 TCACCTCTGAAGTAAACAAGGACT 59.346 41.667 0.00 0.00 0.00 3.85
2882 12464 4.957296 TCACCTCTGAAGTAAACAAGGAC 58.043 43.478 0.00 0.00 0.00 3.85
2883 12465 5.623956 TTCACCTCTGAAGTAAACAAGGA 57.376 39.130 0.00 0.00 32.33 3.36
2884 12466 7.162082 AGTATTCACCTCTGAAGTAAACAAGG 58.838 38.462 0.00 0.00 39.83 3.61
2885 12467 7.872993 TGAGTATTCACCTCTGAAGTAAACAAG 59.127 37.037 0.00 0.00 39.83 3.16
2886 12468 7.732025 TGAGTATTCACCTCTGAAGTAAACAA 58.268 34.615 0.00 0.00 39.83 2.83
2887 12469 7.297936 TGAGTATTCACCTCTGAAGTAAACA 57.702 36.000 0.00 0.00 39.83 2.83
2888 12470 6.311690 GCTGAGTATTCACCTCTGAAGTAAAC 59.688 42.308 0.00 0.00 39.83 2.01
2889 12471 6.398918 GCTGAGTATTCACCTCTGAAGTAAA 58.601 40.000 0.00 0.00 39.83 2.01
2890 12472 5.105310 GGCTGAGTATTCACCTCTGAAGTAA 60.105 44.000 0.00 0.00 39.83 2.24
2891 12473 4.402793 GGCTGAGTATTCACCTCTGAAGTA 59.597 45.833 0.00 0.00 39.83 2.24
2892 12474 3.196685 GGCTGAGTATTCACCTCTGAAGT 59.803 47.826 0.00 0.00 39.83 3.01
2893 12475 3.450457 AGGCTGAGTATTCACCTCTGAAG 59.550 47.826 0.00 0.00 39.83 3.02
2894 12476 3.196469 CAGGCTGAGTATTCACCTCTGAA 59.804 47.826 9.42 0.00 40.77 3.02
2895 12477 2.762887 CAGGCTGAGTATTCACCTCTGA 59.237 50.000 9.42 0.00 34.60 3.27
2896 12478 2.741228 GCAGGCTGAGTATTCACCTCTG 60.741 54.545 20.86 5.39 34.60 3.35
2897 12479 1.484240 GCAGGCTGAGTATTCACCTCT 59.516 52.381 20.86 0.00 34.60 3.69
2898 12480 1.484240 AGCAGGCTGAGTATTCACCTC 59.516 52.381 20.86 0.00 34.60 3.85
2899 12481 1.209019 CAGCAGGCTGAGTATTCACCT 59.791 52.381 20.86 0.00 46.30 4.00
2900 12482 1.208052 TCAGCAGGCTGAGTATTCACC 59.792 52.381 20.86 0.00 46.80 4.02
2901 12483 2.680312 TCAGCAGGCTGAGTATTCAC 57.320 50.000 20.86 0.00 46.80 3.18
2910 12492 2.573369 AGCAATAATCTCAGCAGGCTG 58.427 47.619 14.97 14.97 44.86 4.85
2911 12493 3.294038 AAGCAATAATCTCAGCAGGCT 57.706 42.857 0.00 0.00 0.00 4.58
2912 12494 4.518211 ACATAAGCAATAATCTCAGCAGGC 59.482 41.667 0.00 0.00 0.00 4.85
2913 12495 5.562307 GCACATAAGCAATAATCTCAGCAGG 60.562 44.000 0.00 0.00 0.00 4.85
2914 12496 5.008316 TGCACATAAGCAATAATCTCAGCAG 59.992 40.000 0.00 0.00 42.46 4.24
2915 12497 4.883006 TGCACATAAGCAATAATCTCAGCA 59.117 37.500 0.00 0.00 42.46 4.41
2916 12498 5.428496 TGCACATAAGCAATAATCTCAGC 57.572 39.130 0.00 0.00 42.46 4.26
2927 12509 1.255882 CCTTGGGTTGCACATAAGCA 58.744 50.000 0.00 0.00 43.99 3.91
2928 12510 1.256812 ACCTTGGGTTGCACATAAGC 58.743 50.000 0.00 0.00 27.29 3.09
2929 12511 4.434713 GTAACCTTGGGTTGCACATAAG 57.565 45.455 11.68 0.00 46.35 1.73
2936 12518 5.715434 TTAATTCAGTAACCTTGGGTTGC 57.285 39.130 11.68 10.31 46.35 4.17
2937 12519 7.461182 TCATTAATTCAGTAACCTTGGGTTG 57.539 36.000 11.68 0.00 46.35 3.77
2939 12521 7.893302 TCATTCATTAATTCAGTAACCTTGGGT 59.107 33.333 0.00 0.00 37.65 4.51
2940 12522 8.292444 TCATTCATTAATTCAGTAACCTTGGG 57.708 34.615 0.00 0.00 0.00 4.12
2941 12523 7.917505 GCTCATTCATTAATTCAGTAACCTTGG 59.082 37.037 0.00 0.00 0.00 3.61
2942 12524 8.461222 TGCTCATTCATTAATTCAGTAACCTTG 58.539 33.333 0.00 0.00 0.00 3.61
2943 12525 8.579850 TGCTCATTCATTAATTCAGTAACCTT 57.420 30.769 0.00 0.00 0.00 3.50
2944 12526 7.831193 ACTGCTCATTCATTAATTCAGTAACCT 59.169 33.333 0.00 0.00 31.29 3.50
2945 12527 7.989826 ACTGCTCATTCATTAATTCAGTAACC 58.010 34.615 0.00 0.00 31.29 2.85
2946 12528 9.282247 CAACTGCTCATTCATTAATTCAGTAAC 57.718 33.333 0.00 0.00 32.09 2.50
2947 12529 9.013229 ACAACTGCTCATTCATTAATTCAGTAA 57.987 29.630 0.00 0.00 32.09 2.24
2948 12530 8.453320 CACAACTGCTCATTCATTAATTCAGTA 58.547 33.333 0.00 0.00 32.09 2.74
2949 12531 7.040201 ACACAACTGCTCATTCATTAATTCAGT 60.040 33.333 0.00 0.00 32.95 3.41
2950 12532 7.272731 CACACAACTGCTCATTCATTAATTCAG 59.727 37.037 0.00 0.00 0.00 3.02
2951 12533 7.085746 CACACAACTGCTCATTCATTAATTCA 58.914 34.615 0.00 0.00 0.00 2.57
2952 12534 6.034256 GCACACAACTGCTCATTCATTAATTC 59.966 38.462 0.00 0.00 34.06 2.17
2953 12535 5.865552 GCACACAACTGCTCATTCATTAATT 59.134 36.000 0.00 0.00 34.06 1.40
2954 12536 5.404946 GCACACAACTGCTCATTCATTAAT 58.595 37.500 0.00 0.00 34.06 1.40
2955 12537 4.613394 CGCACACAACTGCTCATTCATTAA 60.613 41.667 0.00 0.00 34.77 1.40
2956 12538 3.120234 CGCACACAACTGCTCATTCATTA 60.120 43.478 0.00 0.00 34.77 1.90
2957 12539 2.351060 CGCACACAACTGCTCATTCATT 60.351 45.455 0.00 0.00 34.77 2.57
2958 12540 1.198408 CGCACACAACTGCTCATTCAT 59.802 47.619 0.00 0.00 34.77 2.57
2959 12541 0.587768 CGCACACAACTGCTCATTCA 59.412 50.000 0.00 0.00 34.77 2.57
2960 12542 0.727122 GCGCACACAACTGCTCATTC 60.727 55.000 0.30 0.00 34.77 2.67
2961 12543 1.283793 GCGCACACAACTGCTCATT 59.716 52.632 0.30 0.00 34.77 2.57
2962 12544 1.239296 ATGCGCACACAACTGCTCAT 61.239 50.000 14.90 0.00 37.69 2.90
2963 12545 1.893335 ATGCGCACACAACTGCTCA 60.893 52.632 14.90 0.00 36.37 4.26
2964 12546 1.441515 CATGCGCACACAACTGCTC 60.442 57.895 14.90 0.00 34.77 4.26
2965 12547 0.884259 TACATGCGCACACAACTGCT 60.884 50.000 14.90 0.00 34.77 4.24
2966 12548 0.040514 TTACATGCGCACACAACTGC 60.041 50.000 14.90 0.00 0.00 4.40
2967 12549 1.662876 GGTTACATGCGCACACAACTG 60.663 52.381 14.90 8.89 0.00 3.16
2968 12550 0.591170 GGTTACATGCGCACACAACT 59.409 50.000 14.90 0.00 0.00 3.16
2969 12551 0.724453 CGGTTACATGCGCACACAAC 60.724 55.000 14.90 16.39 0.00 3.32
2970 12552 0.880718 TCGGTTACATGCGCACACAA 60.881 50.000 14.90 3.32 0.00 3.33
2971 12553 1.301009 TCGGTTACATGCGCACACA 60.301 52.632 14.90 0.00 0.00 3.72
2972 12554 1.131826 GTCGGTTACATGCGCACAC 59.868 57.895 14.90 7.33 0.00 3.82
2973 12555 2.376538 CGTCGGTTACATGCGCACA 61.377 57.895 14.90 0.00 0.00 4.57
2974 12556 2.377310 ACGTCGGTTACATGCGCAC 61.377 57.895 14.90 0.00 0.00 5.34
2975 12557 2.048970 ACGTCGGTTACATGCGCA 60.049 55.556 14.96 14.96 0.00 6.09
2976 12558 2.394136 CACGTCGGTTACATGCGC 59.606 61.111 0.00 0.00 0.00 6.09
2977 12559 1.009903 TTCCACGTCGGTTACATGCG 61.010 55.000 0.00 0.00 35.57 4.73
2978 12560 1.149987 TTTCCACGTCGGTTACATGC 58.850 50.000 0.00 0.00 35.57 4.06
2979 12561 4.426416 TCTATTTCCACGTCGGTTACATG 58.574 43.478 0.00 0.00 35.57 3.21
2980 12562 4.679662 CTCTATTTCCACGTCGGTTACAT 58.320 43.478 0.00 0.00 35.57 2.29
2981 12563 3.674138 GCTCTATTTCCACGTCGGTTACA 60.674 47.826 0.00 0.00 35.57 2.41
2982 12564 2.856557 GCTCTATTTCCACGTCGGTTAC 59.143 50.000 0.00 0.00 35.57 2.50
2983 12565 2.492881 TGCTCTATTTCCACGTCGGTTA 59.507 45.455 0.00 0.00 35.57 2.85
2984 12566 1.274167 TGCTCTATTTCCACGTCGGTT 59.726 47.619 0.00 0.00 35.57 4.44
2985 12567 0.892755 TGCTCTATTTCCACGTCGGT 59.107 50.000 0.00 0.00 35.57 4.69
2986 12568 1.560923 CTGCTCTATTTCCACGTCGG 58.439 55.000 0.00 0.00 0.00 4.79
2987 12569 1.560923 CCTGCTCTATTTCCACGTCG 58.439 55.000 0.00 0.00 0.00 5.12
2988 12570 1.291132 GCCTGCTCTATTTCCACGTC 58.709 55.000 0.00 0.00 0.00 4.34
2989 12571 0.107654 GGCCTGCTCTATTTCCACGT 60.108 55.000 0.00 0.00 0.00 4.49
2990 12572 0.815615 GGGCCTGCTCTATTTCCACG 60.816 60.000 0.84 0.00 0.00 4.94
2991 12573 0.548510 AGGGCCTGCTCTATTTCCAC 59.451 55.000 4.50 0.00 0.00 4.02
2992 12574 1.298953 AAGGGCCTGCTCTATTTCCA 58.701 50.000 6.92 0.00 0.00 3.53
2993 12575 2.443958 AAAGGGCCTGCTCTATTTCC 57.556 50.000 6.92 0.00 0.00 3.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.