Multiple sequence alignment - TraesCS3D01G471000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G471000 chr3D 100.000 4139 0 0 1 4139 573401446 573405584 0.000000e+00 7644
1 TraesCS3D01G471000 chr3D 81.056 2122 356 25 1016 3110 581514906 581512804 0.000000e+00 1650
2 TraesCS3D01G471000 chr3D 78.376 2081 385 42 1045 3079 581507695 581505634 0.000000e+00 1290
3 TraesCS3D01G471000 chr3D 78.258 1826 327 36 1309 3086 581458710 581456907 0.000000e+00 1109
4 TraesCS3D01G471000 chr3D 79.023 839 158 10 1043 1875 581421129 581420303 3.610000e-155 558
5 TraesCS3D01G471000 chr3D 81.967 122 20 2 1344 1464 581516167 581516047 7.320000e-18 102
6 TraesCS3D01G471000 chr3B 92.793 2886 174 18 975 3843 762802230 762805098 0.000000e+00 4146
7 TraesCS3D01G471000 chr3B 79.240 2105 348 51 1016 3083 777001077 777003129 0.000000e+00 1384
8 TraesCS3D01G471000 chr3B 79.903 1234 213 21 1911 3122 776997248 776998468 0.000000e+00 872
9 TraesCS3D01G471000 chr3B 78.620 1188 221 19 1921 3086 777034038 777035214 0.000000e+00 756
10 TraesCS3D01G471000 chr3B 90.529 454 17 13 519 963 762801810 762802246 9.980000e-161 577
11 TraesCS3D01G471000 chr3B 95.669 254 11 0 270 523 762797502 762797755 3.850000e-110 409
12 TraesCS3D01G471000 chr3B 76.275 451 88 11 1105 1551 777000211 777000646 5.390000e-54 222
13 TraesCS3D01G471000 chr3A 80.923 2123 357 29 1016 3110 716586824 716588926 0.000000e+00 1633
14 TraesCS3D01G471000 chr3A 93.727 1084 64 4 2539 3620 707997251 707998332 0.000000e+00 1622
15 TraesCS3D01G471000 chr3A 77.408 2014 370 50 1132 3086 716597695 716599682 0.000000e+00 1120
16 TraesCS3D01G471000 chr3A 77.788 1049 191 26 1020 2040 716563603 716564637 3.540000e-170 608
17 TraesCS3D01G471000 chr3A 87.473 471 27 7 3679 4139 707998326 707998774 7.930000e-142 514
18 TraesCS3D01G471000 chr3A 79.073 626 113 11 2465 3081 716566753 716567369 8.280000e-112 414
19 TraesCS3D01G471000 chr3A 96.296 108 4 0 14 121 707997146 707997253 1.180000e-40 178
20 TraesCS3D01G471000 chr2B 79.269 1177 208 23 1932 3083 26573082 26571917 0.000000e+00 789
21 TraesCS3D01G471000 chr2A 79.062 1194 209 22 1920 3083 16870847 16869665 0.000000e+00 782
22 TraesCS3D01G471000 chr2D 78.864 1197 212 22 1920 3083 14777368 14776180 0.000000e+00 771
23 TraesCS3D01G471000 chr6A 90.283 247 20 3 272 518 591337145 591336903 1.860000e-83 320


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G471000 chr3D 573401446 573405584 4138 False 7644.000000 7644 100.000000 1 4139 1 chr3D.!!$F1 4138
1 TraesCS3D01G471000 chr3D 581505634 581507695 2061 True 1290.000000 1290 78.376000 1045 3079 1 chr3D.!!$R3 2034
2 TraesCS3D01G471000 chr3D 581456907 581458710 1803 True 1109.000000 1109 78.258000 1309 3086 1 chr3D.!!$R2 1777
3 TraesCS3D01G471000 chr3D 581512804 581516167 3363 True 876.000000 1650 81.511500 1016 3110 2 chr3D.!!$R4 2094
4 TraesCS3D01G471000 chr3D 581420303 581421129 826 True 558.000000 558 79.023000 1043 1875 1 chr3D.!!$R1 832
5 TraesCS3D01G471000 chr3B 762801810 762805098 3288 False 2361.500000 4146 91.661000 519 3843 2 chr3B.!!$F3 3324
6 TraesCS3D01G471000 chr3B 776997248 777003129 5881 False 826.000000 1384 78.472667 1016 3122 3 chr3B.!!$F4 2106
7 TraesCS3D01G471000 chr3B 777034038 777035214 1176 False 756.000000 756 78.620000 1921 3086 1 chr3B.!!$F2 1165
8 TraesCS3D01G471000 chr3A 716586824 716588926 2102 False 1633.000000 1633 80.923000 1016 3110 1 chr3A.!!$F1 2094
9 TraesCS3D01G471000 chr3A 716597695 716599682 1987 False 1120.000000 1120 77.408000 1132 3086 1 chr3A.!!$F2 1954
10 TraesCS3D01G471000 chr3A 707997146 707998774 1628 False 771.333333 1622 92.498667 14 4139 3 chr3A.!!$F3 4125
11 TraesCS3D01G471000 chr3A 716563603 716567369 3766 False 511.000000 608 78.430500 1020 3081 2 chr3A.!!$F4 2061
12 TraesCS3D01G471000 chr2B 26571917 26573082 1165 True 789.000000 789 79.269000 1932 3083 1 chr2B.!!$R1 1151
13 TraesCS3D01G471000 chr2A 16869665 16870847 1182 True 782.000000 782 79.062000 1920 3083 1 chr2A.!!$R1 1163
14 TraesCS3D01G471000 chr2D 14776180 14777368 1188 True 771.000000 771 78.864000 1920 3083 1 chr2D.!!$R1 1163

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
399 400 0.034896 ACGAACATGGTGGTGAGTCC 59.965 55.0 0.00 0.0 0.00 3.85 F
464 465 0.108138 GCTCTCGGGTATGCAGTGTT 60.108 55.0 0.00 0.0 0.00 3.32 F
933 943 0.597118 GCTGTTCGTTTGCATTGCCA 60.597 50.0 6.12 0.0 0.00 4.92 F
2019 5583 0.807667 AGCCATACAAAGCTCTCGCG 60.808 55.0 0.00 0.0 42.32 5.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1958 5522 0.032952 TCGACGGACTCCAACAAAGG 59.967 55.000 0.00 0.0 0.00 3.11 R
2265 7311 1.153289 CAGGTTCCTCTGGCCATCG 60.153 63.158 5.51 0.0 0.00 3.84 R
2879 8159 0.755698 GTCTACGGCCTCCAGGATCA 60.756 60.000 0.00 0.0 37.39 2.92 R
3995 9358 0.105039 CCAGCTACATTCGACCTCCC 59.895 60.000 0.00 0.0 0.00 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.205587 ACATAGTCTAACAGTACTCGGGG 58.794 47.826 0.00 0.00 0.00 5.73
24 25 1.472188 AGTCTAACAGTACTCGGGGC 58.528 55.000 0.00 0.00 0.00 5.80
27 28 0.179108 CTAACAGTACTCGGGGCTGC 60.179 60.000 8.74 0.00 33.87 5.25
29 30 1.764571 AACAGTACTCGGGGCTGCAA 61.765 55.000 8.74 0.00 33.87 4.08
30 31 1.741770 CAGTACTCGGGGCTGCAAC 60.742 63.158 0.50 0.00 0.00 4.17
31 32 2.436115 GTACTCGGGGCTGCAACC 60.436 66.667 0.50 0.00 0.00 3.77
40 41 3.056328 GCTGCAACCCCGACCTTC 61.056 66.667 0.00 0.00 0.00 3.46
44 45 2.742372 CAACCCCGACCTTCGCAG 60.742 66.667 0.00 0.00 38.82 5.18
45 46 4.699522 AACCCCGACCTTCGCAGC 62.700 66.667 0.00 0.00 38.82 5.25
47 48 4.473520 CCCCGACCTTCGCAGCAT 62.474 66.667 0.00 0.00 38.82 3.79
48 49 3.197790 CCCGACCTTCGCAGCATG 61.198 66.667 0.00 0.00 38.82 4.06
49 50 2.125552 CCGACCTTCGCAGCATGA 60.126 61.111 0.00 0.00 38.82 3.07
50 51 1.741401 CCGACCTTCGCAGCATGAA 60.741 57.895 0.00 0.00 38.82 2.57
51 52 1.699656 CCGACCTTCGCAGCATGAAG 61.700 60.000 0.00 3.64 41.95 3.02
52 53 1.427020 GACCTTCGCAGCATGAAGC 59.573 57.895 0.00 0.00 41.16 3.86
74 75 4.435436 CCCGCGCTAGTGTGCTGA 62.435 66.667 11.43 0.00 46.58 4.26
75 76 2.882777 CCGCGCTAGTGTGCTGAG 60.883 66.667 11.43 0.00 46.58 3.35
76 77 3.549150 CGCGCTAGTGTGCTGAGC 61.549 66.667 5.56 0.00 46.58 4.26
77 78 3.191539 GCGCTAGTGTGCTGAGCC 61.192 66.667 0.23 0.00 45.43 4.70
79 80 2.573869 GCTAGTGTGCTGAGCCGA 59.426 61.111 0.23 0.00 0.00 5.54
81 82 1.355066 GCTAGTGTGCTGAGCCGAAC 61.355 60.000 0.23 0.00 0.00 3.95
82 83 0.244994 CTAGTGTGCTGAGCCGAACT 59.755 55.000 0.23 5.49 0.00 3.01
83 84 0.243907 TAGTGTGCTGAGCCGAACTC 59.756 55.000 0.23 0.00 46.45 3.01
94 95 2.338620 CGAACTCGGCTGACCACA 59.661 61.111 0.00 0.00 34.57 4.17
95 96 1.079819 CGAACTCGGCTGACCACAT 60.080 57.895 0.00 0.00 34.57 3.21
96 97 1.354337 CGAACTCGGCTGACCACATG 61.354 60.000 0.00 0.00 34.57 3.21
97 98 0.037326 GAACTCGGCTGACCACATGA 60.037 55.000 0.00 0.00 34.57 3.07
98 99 0.036952 AACTCGGCTGACCACATGAG 60.037 55.000 0.00 0.00 34.57 2.90
101 102 1.191489 TCGGCTGACCACATGAGGAA 61.191 55.000 16.78 2.85 34.57 3.36
103 104 0.036732 GGCTGACCACATGAGGAACA 59.963 55.000 16.78 13.43 35.26 3.18
105 106 1.543208 GCTGACCACATGAGGAACACA 60.543 52.381 16.78 9.00 0.00 3.72
106 107 2.420642 CTGACCACATGAGGAACACAG 58.579 52.381 16.78 13.90 29.06 3.66
107 108 1.160137 GACCACATGAGGAACACAGC 58.840 55.000 16.78 0.00 29.06 4.40
108 109 0.603707 ACCACATGAGGAACACAGCG 60.604 55.000 16.78 0.00 29.06 5.18
109 110 0.603707 CCACATGAGGAACACAGCGT 60.604 55.000 2.50 0.00 29.06 5.07
110 111 0.792640 CACATGAGGAACACAGCGTC 59.207 55.000 0.00 0.00 29.06 5.19
111 112 0.392706 ACATGAGGAACACAGCGTCA 59.607 50.000 0.00 0.00 35.03 4.35
112 113 1.002430 ACATGAGGAACACAGCGTCAT 59.998 47.619 0.00 0.00 40.36 3.06
114 115 0.392706 TGAGGAACACAGCGTCATGT 59.607 50.000 0.00 0.00 0.00 3.21
119 120 3.566261 CACAGCGTCATGTGGGAC 58.434 61.111 8.97 0.00 45.53 4.46
125 126 3.388841 GTCATGTGGGACGGGTCT 58.611 61.111 0.00 0.00 0.00 3.85
126 127 1.079127 GTCATGTGGGACGGGTCTG 60.079 63.158 0.00 0.00 0.00 3.51
127 128 2.436646 CATGTGGGACGGGTCTGC 60.437 66.667 0.00 0.00 0.00 4.26
128 129 2.607750 ATGTGGGACGGGTCTGCT 60.608 61.111 0.00 0.00 0.00 4.24
129 130 2.660064 ATGTGGGACGGGTCTGCTC 61.660 63.158 0.00 0.00 0.00 4.26
131 132 2.997315 TGGGACGGGTCTGCTCTG 60.997 66.667 0.00 0.00 0.00 3.35
132 133 4.459089 GGGACGGGTCTGCTCTGC 62.459 72.222 0.00 0.00 0.00 4.26
133 134 3.695606 GGACGGGTCTGCTCTGCA 61.696 66.667 0.00 0.00 36.92 4.41
144 145 4.093952 CTCTGCAGCCGCCGTTTG 62.094 66.667 9.47 0.00 37.32 2.93
156 157 2.127758 CGTTTGCACGGAAGCGAC 60.128 61.111 1.45 0.00 43.16 5.19
157 158 2.594962 CGTTTGCACGGAAGCGACT 61.595 57.895 1.45 0.00 43.16 4.18
159 160 1.522806 TTTGCACGGAAGCGACTGT 60.523 52.632 0.00 0.00 37.31 3.55
160 161 1.771073 TTTGCACGGAAGCGACTGTG 61.771 55.000 16.77 16.77 46.27 3.66
161 162 2.355837 GCACGGAAGCGACTGTGA 60.356 61.111 22.53 0.00 46.40 3.58
164 165 1.148310 CACGGAAGCGACTGTGATTT 58.852 50.000 16.31 0.00 46.40 2.17
165 166 1.136252 CACGGAAGCGACTGTGATTTG 60.136 52.381 16.31 0.00 46.40 2.32
167 168 1.798223 CGGAAGCGACTGTGATTTGAA 59.202 47.619 0.00 0.00 0.00 2.69
168 169 2.159787 CGGAAGCGACTGTGATTTGAAG 60.160 50.000 0.00 0.00 0.00 3.02
169 170 3.067106 GGAAGCGACTGTGATTTGAAGA 58.933 45.455 0.00 0.00 0.00 2.87
170 171 3.686726 GGAAGCGACTGTGATTTGAAGAT 59.313 43.478 0.00 0.00 0.00 2.40
171 172 4.436584 GGAAGCGACTGTGATTTGAAGATG 60.437 45.833 0.00 0.00 0.00 2.90
172 173 3.005554 AGCGACTGTGATTTGAAGATGG 58.994 45.455 0.00 0.00 0.00 3.51
175 176 4.095483 GCGACTGTGATTTGAAGATGGAAT 59.905 41.667 0.00 0.00 0.00 3.01
177 178 6.510799 GCGACTGTGATTTGAAGATGGAATAG 60.511 42.308 0.00 0.00 0.00 1.73
178 179 6.510799 CGACTGTGATTTGAAGATGGAATAGC 60.511 42.308 0.00 0.00 0.00 2.97
179 180 5.295292 ACTGTGATTTGAAGATGGAATAGCG 59.705 40.000 0.00 0.00 0.00 4.26
180 181 5.427378 TGTGATTTGAAGATGGAATAGCGA 58.573 37.500 0.00 0.00 0.00 4.93
181 182 5.879777 TGTGATTTGAAGATGGAATAGCGAA 59.120 36.000 0.00 0.00 0.00 4.70
183 184 6.258727 GTGATTTGAAGATGGAATAGCGAAGA 59.741 38.462 0.00 0.00 0.00 2.87
184 185 6.994496 TGATTTGAAGATGGAATAGCGAAGAT 59.006 34.615 0.00 0.00 0.00 2.40
185 186 8.150296 TGATTTGAAGATGGAATAGCGAAGATA 58.850 33.333 0.00 0.00 0.00 1.98
186 187 7.953158 TTTGAAGATGGAATAGCGAAGATAG 57.047 36.000 0.00 0.00 0.00 2.08
188 189 7.290110 TGAAGATGGAATAGCGAAGATAGAA 57.710 36.000 0.00 0.00 0.00 2.10
189 190 7.901029 TGAAGATGGAATAGCGAAGATAGAAT 58.099 34.615 0.00 0.00 0.00 2.40
190 191 9.025041 TGAAGATGGAATAGCGAAGATAGAATA 57.975 33.333 0.00 0.00 0.00 1.75
191 192 9.296400 GAAGATGGAATAGCGAAGATAGAATAC 57.704 37.037 0.00 0.00 0.00 1.89
192 193 7.777095 AGATGGAATAGCGAAGATAGAATACC 58.223 38.462 0.00 0.00 0.00 2.73
193 194 6.282199 TGGAATAGCGAAGATAGAATACCC 57.718 41.667 0.00 0.00 0.00 3.69
195 196 7.179966 TGGAATAGCGAAGATAGAATACCCTA 58.820 38.462 0.00 0.00 0.00 3.53
196 197 7.339721 TGGAATAGCGAAGATAGAATACCCTAG 59.660 40.741 0.00 0.00 0.00 3.02
197 198 6.702716 ATAGCGAAGATAGAATACCCTAGC 57.297 41.667 0.00 0.00 0.00 3.42
200 201 3.128938 CGAAGATAGAATACCCTAGCCCG 59.871 52.174 0.00 0.00 0.00 6.13
201 202 3.829728 AGATAGAATACCCTAGCCCGT 57.170 47.619 0.00 0.00 0.00 5.28
202 203 3.432378 AGATAGAATACCCTAGCCCGTG 58.568 50.000 0.00 0.00 0.00 4.94
203 204 3.075582 AGATAGAATACCCTAGCCCGTGA 59.924 47.826 0.00 0.00 0.00 4.35
205 206 1.971357 AGAATACCCTAGCCCGTGATG 59.029 52.381 0.00 0.00 0.00 3.07
206 207 0.396811 AATACCCTAGCCCGTGATGC 59.603 55.000 0.00 0.00 0.00 3.91
208 209 1.682451 TACCCTAGCCCGTGATGCAC 61.682 60.000 0.00 0.00 0.00 4.57
209 210 2.735772 CCCTAGCCCGTGATGCACT 61.736 63.158 0.00 0.00 31.34 4.40
211 212 1.517361 CTAGCCCGTGATGCACTGA 59.483 57.895 0.00 0.00 31.34 3.41
212 213 0.105593 CTAGCCCGTGATGCACTGAT 59.894 55.000 0.00 0.00 31.34 2.90
214 215 1.746615 GCCCGTGATGCACTGATGT 60.747 57.895 0.00 0.00 31.34 3.06
215 216 0.461870 GCCCGTGATGCACTGATGTA 60.462 55.000 0.00 0.00 31.34 2.29
216 217 1.811558 GCCCGTGATGCACTGATGTAT 60.812 52.381 0.00 0.00 33.25 2.29
218 219 3.727726 CCCGTGATGCACTGATGTATAA 58.272 45.455 0.00 0.00 30.29 0.98
219 220 3.742882 CCCGTGATGCACTGATGTATAAG 59.257 47.826 0.00 0.00 30.29 1.73
221 222 5.049828 CCGTGATGCACTGATGTATAAGAA 58.950 41.667 0.00 0.00 30.29 2.52
222 223 5.523552 CCGTGATGCACTGATGTATAAGAAA 59.476 40.000 0.00 0.00 30.29 2.52
246 247 6.493449 AAAACCACACATTGTTTTTGAAGG 57.507 33.333 0.00 0.00 40.71 3.46
247 248 3.530535 ACCACACATTGTTTTTGAAGGC 58.469 40.909 0.00 0.00 0.00 4.35
249 250 3.556775 CCACACATTGTTTTTGAAGGCAG 59.443 43.478 0.00 0.00 0.00 4.85
250 251 4.183101 CACACATTGTTTTTGAAGGCAGT 58.817 39.130 0.00 0.00 0.00 4.40
251 252 4.268405 CACACATTGTTTTTGAAGGCAGTC 59.732 41.667 0.00 0.00 0.00 3.51
252 253 3.803778 CACATTGTTTTTGAAGGCAGTCC 59.196 43.478 0.00 0.00 0.00 3.85
255 256 3.731652 TGTTTTTGAAGGCAGTCCATG 57.268 42.857 0.00 0.00 33.74 3.66
256 257 3.030291 TGTTTTTGAAGGCAGTCCATGT 58.970 40.909 0.00 0.00 33.74 3.21
258 259 4.832266 TGTTTTTGAAGGCAGTCCATGTAT 59.168 37.500 0.00 0.00 33.74 2.29
259 260 5.304101 TGTTTTTGAAGGCAGTCCATGTATT 59.696 36.000 0.00 0.00 33.74 1.89
260 261 6.183360 TGTTTTTGAAGGCAGTCCATGTATTT 60.183 34.615 0.00 0.00 33.74 1.40
263 264 4.406456 TGAAGGCAGTCCATGTATTTTGT 58.594 39.130 0.00 0.00 33.74 2.83
264 265 4.218200 TGAAGGCAGTCCATGTATTTTGTG 59.782 41.667 0.00 0.00 33.74 3.33
266 267 4.406456 AGGCAGTCCATGTATTTTGTGAA 58.594 39.130 0.00 0.00 33.74 3.18
267 268 4.460382 AGGCAGTCCATGTATTTTGTGAAG 59.540 41.667 0.00 0.00 33.74 3.02
268 269 4.168760 GCAGTCCATGTATTTTGTGAAGC 58.831 43.478 0.00 0.00 0.00 3.86
269 270 4.406069 CAGTCCATGTATTTTGTGAAGCG 58.594 43.478 0.00 0.00 0.00 4.68
271 272 3.081061 TCCATGTATTTTGTGAAGCGCT 58.919 40.909 2.64 2.64 0.00 5.92
273 274 3.366273 CCATGTATTTTGTGAAGCGCTGT 60.366 43.478 12.58 0.03 0.00 4.40
274 275 4.142708 CCATGTATTTTGTGAAGCGCTGTA 60.143 41.667 12.58 0.00 0.00 2.74
275 276 4.398549 TGTATTTTGTGAAGCGCTGTAC 57.601 40.909 12.58 14.30 0.00 2.90
276 277 4.062293 TGTATTTTGTGAAGCGCTGTACT 58.938 39.130 12.58 0.00 0.00 2.73
277 278 4.513692 TGTATTTTGTGAAGCGCTGTACTT 59.486 37.500 12.58 0.00 0.00 2.24
278 279 4.568152 ATTTTGTGAAGCGCTGTACTTT 57.432 36.364 12.58 0.00 0.00 2.66
279 280 4.364415 TTTTGTGAAGCGCTGTACTTTT 57.636 36.364 12.58 0.00 0.00 2.27
280 281 5.487153 TTTTGTGAAGCGCTGTACTTTTA 57.513 34.783 12.58 0.00 0.00 1.52
281 282 5.682943 TTTGTGAAGCGCTGTACTTTTAT 57.317 34.783 12.58 0.00 0.00 1.40
282 283 5.682943 TTGTGAAGCGCTGTACTTTTATT 57.317 34.783 12.58 0.00 0.00 1.40
283 284 5.277601 TGTGAAGCGCTGTACTTTTATTC 57.722 39.130 12.58 0.06 0.00 1.75
284 285 4.994852 TGTGAAGCGCTGTACTTTTATTCT 59.005 37.500 12.58 0.00 0.00 2.40
286 287 6.816640 TGTGAAGCGCTGTACTTTTATTCTAT 59.183 34.615 12.58 0.00 0.00 1.98
287 288 7.977293 TGTGAAGCGCTGTACTTTTATTCTATA 59.023 33.333 12.58 0.00 0.00 1.31
288 289 8.979574 GTGAAGCGCTGTACTTTTATTCTATAT 58.020 33.333 12.58 0.00 0.00 0.86
289 290 8.978539 TGAAGCGCTGTACTTTTATTCTATATG 58.021 33.333 12.58 0.00 0.00 1.78
291 292 8.522178 AGCGCTGTACTTTTATTCTATATGTC 57.478 34.615 10.39 0.00 0.00 3.06
293 294 8.979574 GCGCTGTACTTTTATTCTATATGTCTT 58.020 33.333 0.00 0.00 0.00 3.01
320 321 9.177608 TGATAGATTGTAACTTCTTTTGGATGG 57.822 33.333 0.00 0.00 0.00 3.51
323 324 8.336801 AGATTGTAACTTCTTTTGGATGGTAC 57.663 34.615 0.00 0.00 40.53 3.34
324 325 7.942341 AGATTGTAACTTCTTTTGGATGGTACA 59.058 33.333 0.00 5.65 44.84 2.90
325 326 8.650143 ATTGTAACTTCTTTTGGATGGTACAT 57.350 30.769 9.20 0.00 45.39 2.29
326 327 8.472007 TTGTAACTTCTTTTGGATGGTACATT 57.528 30.769 9.20 0.00 45.39 2.71
327 328 8.919145 TTGTAACTTCTTTTGGATGGTACATTT 58.081 29.630 9.20 0.00 45.39 2.32
373 374 8.990163 AAACTAAACTCCATTTTTACTCCAGA 57.010 30.769 0.00 0.00 0.00 3.86
374 375 8.622948 AACTAAACTCCATTTTTACTCCAGAG 57.377 34.615 0.00 0.00 0.00 3.35
376 377 8.606830 ACTAAACTCCATTTTTACTCCAGAGAT 58.393 33.333 0.70 0.00 0.00 2.75
377 378 9.454859 CTAAACTCCATTTTTACTCCAGAGATT 57.545 33.333 0.70 0.00 0.00 2.40
378 379 7.929941 AACTCCATTTTTACTCCAGAGATTC 57.070 36.000 0.70 0.00 0.00 2.52
379 380 6.418946 ACTCCATTTTTACTCCAGAGATTCC 58.581 40.000 0.70 0.00 0.00 3.01
380 381 6.012508 ACTCCATTTTTACTCCAGAGATTCCA 60.013 38.462 0.70 0.00 0.00 3.53
381 382 6.180472 TCCATTTTTACTCCAGAGATTCCAC 58.820 40.000 0.70 0.00 0.00 4.02
382 383 5.065218 CCATTTTTACTCCAGAGATTCCACG 59.935 44.000 0.70 0.00 0.00 4.94
383 384 5.477607 TTTTTACTCCAGAGATTCCACGA 57.522 39.130 0.70 0.00 0.00 4.35
385 386 4.451629 TTACTCCAGAGATTCCACGAAC 57.548 45.455 0.70 0.00 0.00 3.95
386 387 2.248248 ACTCCAGAGATTCCACGAACA 58.752 47.619 0.70 0.00 0.00 3.18
388 389 3.193263 CTCCAGAGATTCCACGAACATG 58.807 50.000 0.00 0.00 0.00 3.21
389 390 2.093500 TCCAGAGATTCCACGAACATGG 60.093 50.000 0.00 0.00 41.57 3.66
391 392 2.674852 CAGAGATTCCACGAACATGGTG 59.325 50.000 0.00 0.00 40.95 4.17
397 398 3.305709 CACGAACATGGTGGTGAGT 57.694 52.632 20.13 0.00 32.23 3.41
398 399 1.148310 CACGAACATGGTGGTGAGTC 58.852 55.000 20.13 0.00 32.23 3.36
399 400 0.034896 ACGAACATGGTGGTGAGTCC 59.965 55.000 0.00 0.00 0.00 3.85
400 401 0.673644 CGAACATGGTGGTGAGTCCC 60.674 60.000 0.00 0.00 34.77 4.46
401 402 0.400213 GAACATGGTGGTGAGTCCCA 59.600 55.000 0.00 0.00 34.77 4.37
404 405 0.401738 CATGGTGGTGAGTCCCAAGT 59.598 55.000 2.30 0.00 35.92 3.16
405 406 1.149101 ATGGTGGTGAGTCCCAAGTT 58.851 50.000 2.30 0.00 35.92 2.66
406 407 0.923358 TGGTGGTGAGTCCCAAGTTT 59.077 50.000 2.30 0.00 35.92 2.66
407 408 1.133915 TGGTGGTGAGTCCCAAGTTTC 60.134 52.381 2.30 0.00 35.92 2.78
409 410 2.222027 GTGGTGAGTCCCAAGTTTCAG 58.778 52.381 2.30 0.00 35.92 3.02
410 411 1.843851 TGGTGAGTCCCAAGTTTCAGT 59.156 47.619 0.00 0.00 34.77 3.41
413 414 3.323979 GGTGAGTCCCAAGTTTCAGTAGA 59.676 47.826 0.00 0.00 0.00 2.59
414 415 4.020128 GGTGAGTCCCAAGTTTCAGTAGAT 60.020 45.833 0.00 0.00 0.00 1.98
415 416 4.932200 GTGAGTCCCAAGTTTCAGTAGATG 59.068 45.833 0.00 0.00 0.00 2.90
416 417 4.593206 TGAGTCCCAAGTTTCAGTAGATGT 59.407 41.667 0.00 0.00 0.00 3.06
417 418 5.778241 TGAGTCCCAAGTTTCAGTAGATGTA 59.222 40.000 0.00 0.00 0.00 2.29
420 421 5.046520 GTCCCAAGTTTCAGTAGATGTACCT 60.047 44.000 0.00 0.00 0.00 3.08
421 422 5.187186 TCCCAAGTTTCAGTAGATGTACCTC 59.813 44.000 0.00 0.00 0.00 3.85
422 423 5.187967 CCCAAGTTTCAGTAGATGTACCTCT 59.812 44.000 5.94 5.94 0.00 3.69
423 424 6.102663 CCAAGTTTCAGTAGATGTACCTCTG 58.897 44.000 10.60 2.99 0.00 3.35
425 426 4.772624 AGTTTCAGTAGATGTACCTCTGCA 59.227 41.667 16.24 0.00 31.05 4.41
426 427 5.246203 AGTTTCAGTAGATGTACCTCTGCAA 59.754 40.000 16.24 2.92 31.05 4.08
429 430 3.195610 CAGTAGATGTACCTCTGCAACCA 59.804 47.826 16.24 0.00 31.05 3.67
431 432 3.550437 AGATGTACCTCTGCAACCATC 57.450 47.619 0.00 0.00 0.00 3.51
433 434 4.290093 AGATGTACCTCTGCAACCATCTA 58.710 43.478 0.00 0.00 37.76 1.98
435 436 4.406648 TGTACCTCTGCAACCATCTATG 57.593 45.455 0.00 0.00 0.00 2.23
451 452 4.686839 TCTATGGACATATTCGCTCTCG 57.313 45.455 0.00 0.00 0.00 4.04
456 457 2.492484 GGACATATTCGCTCTCGGGTAT 59.508 50.000 0.00 0.00 36.13 2.73
457 458 3.502920 GACATATTCGCTCTCGGGTATG 58.497 50.000 0.00 0.00 38.33 2.39
459 460 1.324383 TATTCGCTCTCGGGTATGCA 58.676 50.000 0.00 0.00 36.13 3.96
461 462 1.320344 TTCGCTCTCGGGTATGCAGT 61.320 55.000 0.00 0.00 36.13 4.40
462 463 1.589993 CGCTCTCGGGTATGCAGTG 60.590 63.158 0.00 0.00 0.00 3.66
464 465 0.108138 GCTCTCGGGTATGCAGTGTT 60.108 55.000 0.00 0.00 0.00 3.32
465 466 1.645034 CTCTCGGGTATGCAGTGTTG 58.355 55.000 0.00 0.00 0.00 3.33
466 467 0.973632 TCTCGGGTATGCAGTGTTGT 59.026 50.000 0.00 0.00 0.00 3.32
468 469 0.973632 TCGGGTATGCAGTGTTGTCT 59.026 50.000 0.00 0.00 0.00 3.41
469 470 1.346395 TCGGGTATGCAGTGTTGTCTT 59.654 47.619 0.00 0.00 0.00 3.01
470 471 1.464608 CGGGTATGCAGTGTTGTCTTG 59.535 52.381 0.00 0.00 0.00 3.02
472 473 2.884639 GGGTATGCAGTGTTGTCTTGTT 59.115 45.455 0.00 0.00 0.00 2.83
473 474 3.304659 GGGTATGCAGTGTTGTCTTGTTG 60.305 47.826 0.00 0.00 0.00 3.33
475 476 4.036262 GGTATGCAGTGTTGTCTTGTTGAA 59.964 41.667 0.00 0.00 0.00 2.69
477 478 3.342719 TGCAGTGTTGTCTTGTTGAAGA 58.657 40.909 0.00 0.00 35.75 2.87
478 479 3.947196 TGCAGTGTTGTCTTGTTGAAGAT 59.053 39.130 0.00 0.00 40.40 2.40
479 480 4.035558 TGCAGTGTTGTCTTGTTGAAGATC 59.964 41.667 0.00 0.00 40.40 2.75
480 481 4.274459 GCAGTGTTGTCTTGTTGAAGATCT 59.726 41.667 0.00 0.00 40.40 2.75
481 482 5.220931 GCAGTGTTGTCTTGTTGAAGATCTT 60.221 40.000 7.95 7.95 40.40 2.40
482 483 6.678900 GCAGTGTTGTCTTGTTGAAGATCTTT 60.679 38.462 9.87 0.00 40.40 2.52
483 484 6.690098 CAGTGTTGTCTTGTTGAAGATCTTTG 59.310 38.462 9.87 0.00 40.40 2.77
485 486 7.029563 GTGTTGTCTTGTTGAAGATCTTTGTT 58.970 34.615 9.87 0.00 40.40 2.83
486 487 8.181573 GTGTTGTCTTGTTGAAGATCTTTGTTA 58.818 33.333 9.87 0.00 40.40 2.41
487 488 8.735315 TGTTGTCTTGTTGAAGATCTTTGTTAA 58.265 29.630 9.87 3.14 40.40 2.01
492 493 9.748708 TCTTGTTGAAGATCTTTGTTAATTTGG 57.251 29.630 9.87 0.00 32.98 3.28
493 494 9.533253 CTTGTTGAAGATCTTTGTTAATTTGGT 57.467 29.630 9.87 0.00 0.00 3.67
494 495 9.883142 TTGTTGAAGATCTTTGTTAATTTGGTT 57.117 25.926 9.87 0.00 0.00 3.67
495 496 9.311916 TGTTGAAGATCTTTGTTAATTTGGTTG 57.688 29.630 9.87 0.00 0.00 3.77
496 497 8.764287 GTTGAAGATCTTTGTTAATTTGGTTGG 58.236 33.333 9.87 0.00 0.00 3.77
497 498 7.441017 TGAAGATCTTTGTTAATTTGGTTGGG 58.559 34.615 9.87 0.00 0.00 4.12
498 499 7.288852 TGAAGATCTTTGTTAATTTGGTTGGGA 59.711 33.333 9.87 0.00 0.00 4.37
501 502 6.800072 TCTTTGTTAATTTGGTTGGGAGTT 57.200 33.333 0.00 0.00 0.00 3.01
503 504 4.839668 TGTTAATTTGGTTGGGAGTTCG 57.160 40.909 0.00 0.00 0.00 3.95
504 505 3.570550 TGTTAATTTGGTTGGGAGTTCGG 59.429 43.478 0.00 0.00 0.00 4.30
505 506 2.375014 AATTTGGTTGGGAGTTCGGT 57.625 45.000 0.00 0.00 0.00 4.69
506 507 2.375014 ATTTGGTTGGGAGTTCGGTT 57.625 45.000 0.00 0.00 0.00 4.44
507 508 1.682740 TTTGGTTGGGAGTTCGGTTC 58.317 50.000 0.00 0.00 0.00 3.62
508 509 0.841289 TTGGTTGGGAGTTCGGTTCT 59.159 50.000 0.00 0.00 0.00 3.01
510 511 1.202722 TGGTTGGGAGTTCGGTTCTTC 60.203 52.381 0.00 0.00 0.00 2.87
511 512 1.520494 GTTGGGAGTTCGGTTCTTCC 58.480 55.000 0.00 0.00 0.00 3.46
512 513 1.133363 TTGGGAGTTCGGTTCTTCCA 58.867 50.000 0.00 0.00 38.66 3.53
513 514 1.358152 TGGGAGTTCGGTTCTTCCAT 58.642 50.000 0.00 0.00 35.83 3.41
514 515 1.702957 TGGGAGTTCGGTTCTTCCATT 59.297 47.619 0.00 0.00 35.83 3.16
515 516 2.084546 GGGAGTTCGGTTCTTCCATTG 58.915 52.381 0.00 0.00 35.57 2.82
516 517 2.084546 GGAGTTCGGTTCTTCCATTGG 58.915 52.381 0.00 0.00 35.57 3.16
517 518 2.084546 GAGTTCGGTTCTTCCATTGGG 58.915 52.381 2.09 0.00 35.57 4.12
520 521 3.007635 GTTCGGTTCTTCCATTGGGTAG 58.992 50.000 2.09 1.30 35.57 3.18
521 522 2.542550 TCGGTTCTTCCATTGGGTAGA 58.457 47.619 2.09 3.75 38.66 2.59
522 523 2.907696 TCGGTTCTTCCATTGGGTAGAA 59.092 45.455 13.74 13.74 45.15 2.10
540 541 6.768381 GGGTAGAATTAAATGTTGAGGAGGAG 59.232 42.308 0.00 0.00 0.00 3.69
541 542 6.768381 GGTAGAATTAAATGTTGAGGAGGAGG 59.232 42.308 0.00 0.00 0.00 4.30
544 545 7.059156 AGAATTAAATGTTGAGGAGGAGGATG 58.941 38.462 0.00 0.00 0.00 3.51
620 621 2.606551 GCAGAAAGAGGCAGCAAAAGTC 60.607 50.000 0.00 0.00 0.00 3.01
650 651 4.947645 AGAATCAAACACCACAAACATGG 58.052 39.130 0.00 0.00 46.10 3.66
673 674 1.487452 GCGTGCACTTGACGTCAGAA 61.487 55.000 19.11 3.84 39.08 3.02
674 675 1.139989 CGTGCACTTGACGTCAGAAT 58.860 50.000 19.11 5.40 32.06 2.40
699 709 4.463186 ACATAGAGGTTACGCTTCAGACTT 59.537 41.667 0.00 0.00 0.00 3.01
700 710 3.305398 AGAGGTTACGCTTCAGACTTG 57.695 47.619 0.00 0.00 0.00 3.16
731 741 5.068329 CAGATAGACTTGGTCAGATAGCACA 59.932 44.000 0.52 0.00 34.69 4.57
732 742 3.601443 AGACTTGGTCAGATAGCACAC 57.399 47.619 0.52 0.00 34.69 3.82
733 743 2.899900 AGACTTGGTCAGATAGCACACA 59.100 45.455 0.52 0.00 34.69 3.72
799 809 4.250464 CAGAAAGGCGTTGTTGAGGTATA 58.750 43.478 0.00 0.00 0.00 1.47
800 810 4.876107 CAGAAAGGCGTTGTTGAGGTATAT 59.124 41.667 0.00 0.00 0.00 0.86
801 811 6.046593 CAGAAAGGCGTTGTTGAGGTATATA 58.953 40.000 0.00 0.00 0.00 0.86
802 812 6.706270 CAGAAAGGCGTTGTTGAGGTATATAT 59.294 38.462 0.00 0.00 0.00 0.86
857 867 6.377996 TGTTTAGCGGACATTACTAGAGGTTA 59.622 38.462 0.00 0.00 0.00 2.85
865 875 3.996150 TTACTAGAGGTTAATCCGGCG 57.004 47.619 0.00 0.00 41.99 6.46
888 898 2.387309 CACTGGATGTGCGTGGATC 58.613 57.895 0.00 0.00 40.06 3.36
895 905 4.077184 GTGCGTGGATCGTCCCCA 62.077 66.667 2.23 0.00 42.13 4.96
933 943 0.597118 GCTGTTCGTTTGCATTGCCA 60.597 50.000 6.12 0.00 0.00 4.92
966 976 7.912056 TTGAAGATTTCGAGATCACAAATCT 57.088 32.000 17.33 15.60 44.94 2.40
967 977 7.299787 TGAAGATTTCGAGATCACAAATCTG 57.700 36.000 17.33 0.00 43.14 2.90
968 978 6.314648 TGAAGATTTCGAGATCACAAATCTGG 59.685 38.462 17.33 0.00 43.14 3.86
969 979 4.574013 AGATTTCGAGATCACAAATCTGGC 59.426 41.667 17.33 1.52 42.61 4.85
970 980 3.616956 TTCGAGATCACAAATCTGGCT 57.383 42.857 0.00 0.00 0.00 4.75
972 982 4.313277 TCGAGATCACAAATCTGGCTAG 57.687 45.455 0.00 0.00 0.00 3.42
973 983 3.068732 TCGAGATCACAAATCTGGCTAGG 59.931 47.826 0.00 0.00 0.00 3.02
975 985 4.630111 GAGATCACAAATCTGGCTAGGAG 58.370 47.826 0.00 0.00 0.00 3.69
976 986 4.293494 AGATCACAAATCTGGCTAGGAGA 58.707 43.478 0.00 0.00 0.00 3.71
977 987 4.906664 AGATCACAAATCTGGCTAGGAGAT 59.093 41.667 0.00 0.00 0.00 2.75
978 988 5.369110 AGATCACAAATCTGGCTAGGAGATT 59.631 40.000 0.00 0.00 41.07 2.40
979 989 5.441718 TCACAAATCTGGCTAGGAGATTT 57.558 39.130 0.00 5.07 46.47 2.17
980 990 5.431765 TCACAAATCTGGCTAGGAGATTTC 58.568 41.667 7.37 0.00 44.65 2.17
981 991 4.272018 CACAAATCTGGCTAGGAGATTTCG 59.728 45.833 7.37 6.70 44.65 3.46
982 992 4.162320 ACAAATCTGGCTAGGAGATTTCGA 59.838 41.667 7.37 0.00 44.65 3.71
983 993 4.599047 AATCTGGCTAGGAGATTTCGAG 57.401 45.455 0.00 0.00 36.91 4.04
984 994 3.298686 TCTGGCTAGGAGATTTCGAGA 57.701 47.619 0.00 0.00 0.00 4.04
985 995 3.838565 TCTGGCTAGGAGATTTCGAGAT 58.161 45.455 0.00 0.00 0.00 2.75
986 996 4.219115 TCTGGCTAGGAGATTTCGAGATT 58.781 43.478 0.00 0.00 0.00 2.40
987 997 5.386060 TCTGGCTAGGAGATTTCGAGATTA 58.614 41.667 0.00 0.00 0.00 1.75
988 998 5.241949 TCTGGCTAGGAGATTTCGAGATTAC 59.758 44.000 0.00 0.00 0.00 1.89
989 999 4.893524 TGGCTAGGAGATTTCGAGATTACA 59.106 41.667 0.00 0.00 0.00 2.41
990 1000 5.362717 TGGCTAGGAGATTTCGAGATTACAA 59.637 40.000 0.00 0.00 0.00 2.41
991 1001 5.692654 GGCTAGGAGATTTCGAGATTACAAC 59.307 44.000 0.00 0.00 0.00 3.32
1033 4539 2.146342 AGGTGTTTGCTGACGATCTTG 58.854 47.619 0.00 0.00 0.00 3.02
1089 4598 2.983907 TTTCCCGCCGAATACACATA 57.016 45.000 0.00 0.00 0.00 2.29
1090 4599 2.228138 TTCCCGCCGAATACACATAC 57.772 50.000 0.00 0.00 0.00 2.39
1101 4613 5.176406 CCGAATACACATACTCATGCTTCTG 59.824 44.000 0.00 0.00 35.39 3.02
1102 4614 5.750547 CGAATACACATACTCATGCTTCTGT 59.249 40.000 0.00 0.00 35.39 3.41
1103 4615 6.918022 CGAATACACATACTCATGCTTCTGTA 59.082 38.462 0.00 0.00 35.39 2.74
1341 4862 1.118965 TGTGGGATGTCGACACTGGT 61.119 55.000 22.71 4.38 36.16 4.00
1755 5295 2.416836 CGACGTCACCTACCATGTGAAT 60.417 50.000 17.16 0.00 43.82 2.57
1916 5477 7.054491 AGATTTTGTGGAAACAAATAGCAGT 57.946 32.000 4.98 0.00 46.06 4.40
1958 5522 3.485877 GGAGTTATTGCAATCGTGTGCTC 60.486 47.826 16.86 13.85 45.17 4.26
2019 5583 0.807667 AGCCATACAAAGCTCTCGCG 60.808 55.000 0.00 0.00 42.32 5.87
2040 6914 3.304391 CGAATGGCCGTAAACATATTGGG 60.304 47.826 0.00 0.00 0.00 4.12
2067 6941 3.276091 CTGGCACGTGCGACCAAA 61.276 61.111 32.35 13.34 43.26 3.28
2134 7008 3.257127 TGTTTATCGGGGCCTTTTGAAAG 59.743 43.478 0.84 0.00 35.79 2.62
2170 7050 6.017523 GGCTATAAAGAGATTCAAGCTGGTTC 60.018 42.308 0.00 0.00 32.32 3.62
2265 7311 2.939103 CAAGTTGATAGGCTGGTGCTAC 59.061 50.000 0.00 0.00 39.59 3.58
2295 7341 3.339141 GAGGAACCTGGTTGAGTTCATC 58.661 50.000 18.42 5.57 43.76 2.92
2463 7724 6.257423 TCACATCGCTGCAACTTAATTTATG 58.743 36.000 0.00 0.00 0.00 1.90
2627 7901 7.535489 GTAACATATTACTTGGCTCTTCGTT 57.465 36.000 0.00 0.00 38.15 3.85
2630 7904 5.938125 ACATATTACTTGGCTCTTCGTTTGT 59.062 36.000 0.00 0.00 0.00 2.83
2664 7938 3.009723 TGACTTCGGATTGGCAAGATTC 58.990 45.455 5.96 0.00 0.00 2.52
2879 8159 3.579586 TGGAGTAAGTACAACGGGAATGT 59.420 43.478 0.00 0.00 34.81 2.71
2993 8273 4.329545 GCACCAGGACCCGAGCAA 62.330 66.667 0.00 0.00 0.00 3.91
3086 8366 1.460504 CTAGAGGCGGTGACACACTA 58.539 55.000 8.08 2.53 34.40 2.74
3089 8369 1.006571 AGGCGGTGACACACTAACG 60.007 57.895 8.08 2.36 34.40 3.18
3106 8386 4.814771 ACTAACGGCCATTATCTTTGTAGC 59.185 41.667 2.24 0.00 0.00 3.58
3188 8469 7.239763 TGTGTCAGGTCATAAATCACTTCTA 57.760 36.000 0.00 0.00 0.00 2.10
3192 8473 8.762645 TGTCAGGTCATAAATCACTTCTAGAAT 58.237 33.333 5.44 0.00 0.00 2.40
3212 8493 4.762956 ATAATCGTCTAAGCCGACTACC 57.237 45.455 0.00 0.00 37.12 3.18
3224 8505 1.093159 CGACTACCTTCACCTACGCT 58.907 55.000 0.00 0.00 0.00 5.07
3238 8519 2.484417 CCTACGCTGAGAGCCAAATCAT 60.484 50.000 0.00 0.00 38.18 2.45
3261 8542 5.603596 TGAAAGCTCGGTAAAGACTGTTTA 58.396 37.500 0.00 0.00 33.26 2.01
3275 8556 4.389077 AGACTGTTTAAAGCGAGTACATGC 59.611 41.667 0.00 0.00 0.00 4.06
3314 8595 5.340439 AAACGGTAGAGATAGTCCTTTGG 57.660 43.478 0.00 0.00 0.00 3.28
3354 8635 4.002906 ACTCGGCAAAGATGAAACACTA 57.997 40.909 0.00 0.00 0.00 2.74
3362 8643 6.426937 GGCAAAGATGAAACACTAGACTTACA 59.573 38.462 0.00 0.00 0.00 2.41
3480 8762 1.420138 ACTCCATTGTTTGGGACTCGT 59.580 47.619 0.00 0.00 46.45 4.18
3500 8782 5.350633 TCGTCAAAGAGTCGTTCCTTTTTA 58.649 37.500 0.00 0.00 30.89 1.52
3588 8870 7.275560 GCATAATTTTCATAGGTTCAACCACAC 59.724 37.037 9.90 0.00 41.95 3.82
3613 8895 2.919228 CCACTTCATACAACCCTAGGC 58.081 52.381 2.05 0.00 0.00 3.93
3614 8896 2.421529 CCACTTCATACAACCCTAGGCC 60.422 54.545 2.05 0.00 0.00 5.19
3615 8897 1.485066 ACTTCATACAACCCTAGGCCG 59.515 52.381 2.05 0.00 0.00 6.13
3616 8898 0.179468 TTCATACAACCCTAGGCCGC 59.821 55.000 2.05 0.00 0.00 6.53
3617 8899 1.227853 CATACAACCCTAGGCCGCC 60.228 63.158 2.05 0.00 0.00 6.13
3618 8900 2.803817 ATACAACCCTAGGCCGCCG 61.804 63.158 2.05 0.00 0.00 6.46
3625 8907 4.625781 CTAGGCCGCCGCGTCTAC 62.626 72.222 12.58 0.00 34.31 2.59
3631 8913 4.564116 CGCCGCGTCTACCCGAAT 62.564 66.667 4.92 0.00 0.00 3.34
3632 8914 2.202837 GCCGCGTCTACCCGAATT 60.203 61.111 4.92 0.00 0.00 2.17
3633 8915 1.066257 GCCGCGTCTACCCGAATTA 59.934 57.895 4.92 0.00 0.00 1.40
3634 8916 0.319297 GCCGCGTCTACCCGAATTAT 60.319 55.000 4.92 0.00 0.00 1.28
3635 8917 1.870993 GCCGCGTCTACCCGAATTATT 60.871 52.381 4.92 0.00 0.00 1.40
3636 8918 2.476821 CCGCGTCTACCCGAATTATTT 58.523 47.619 4.92 0.00 0.00 1.40
3637 8919 2.867975 CCGCGTCTACCCGAATTATTTT 59.132 45.455 4.92 0.00 0.00 1.82
3638 8920 3.310501 CCGCGTCTACCCGAATTATTTTT 59.689 43.478 4.92 0.00 0.00 1.94
3655 8937 2.951229 TTTTCCCTGTCACCTTCCTC 57.049 50.000 0.00 0.00 0.00 3.71
3656 8938 1.064825 TTTCCCTGTCACCTTCCTCC 58.935 55.000 0.00 0.00 0.00 4.30
3657 8939 1.192146 TTCCCTGTCACCTTCCTCCG 61.192 60.000 0.00 0.00 0.00 4.63
3658 8940 2.266055 CCTGTCACCTTCCTCCGC 59.734 66.667 0.00 0.00 0.00 5.54
3659 8941 2.266055 CTGTCACCTTCCTCCGCC 59.734 66.667 0.00 0.00 0.00 6.13
3660 8942 3.649277 CTGTCACCTTCCTCCGCCG 62.649 68.421 0.00 0.00 0.00 6.46
3674 8956 2.746277 GCCGCCGTTCCTCACATT 60.746 61.111 0.00 0.00 0.00 2.71
3675 8957 3.039202 GCCGCCGTTCCTCACATTG 62.039 63.158 0.00 0.00 0.00 2.82
3676 8958 1.671054 CCGCCGTTCCTCACATTGT 60.671 57.895 0.00 0.00 0.00 2.71
3677 8959 0.390603 CCGCCGTTCCTCACATTGTA 60.391 55.000 0.00 0.00 0.00 2.41
3787 9140 5.906113 TGGACTAGAAACTTTTTGTGCAA 57.094 34.783 0.00 0.00 0.00 4.08
3788 9141 5.890334 TGGACTAGAAACTTTTTGTGCAAG 58.110 37.500 0.00 0.00 0.00 4.01
3789 9142 5.163561 TGGACTAGAAACTTTTTGTGCAAGG 60.164 40.000 0.00 0.00 0.00 3.61
3791 9144 6.136541 ACTAGAAACTTTTTGTGCAAGGAG 57.863 37.500 0.00 0.00 0.00 3.69
3843 9205 3.660970 TCTGCCCACCTGCAATATTTA 57.339 42.857 0.00 0.00 41.51 1.40
3846 9208 3.953612 CTGCCCACCTGCAATATTTAAGA 59.046 43.478 0.00 0.00 41.51 2.10
3877 9239 7.593875 TTGCATTTCTATGGTTTTAATGTGC 57.406 32.000 0.00 0.00 32.15 4.57
3910 9272 5.603170 AGGTGGCCAAATGAAATCATTAG 57.397 39.130 7.24 5.62 45.06 1.73
3916 9279 5.163478 GGCCAAATGAAATCATTAGCAGAGT 60.163 40.000 22.29 2.39 45.06 3.24
3919 9282 7.201767 GCCAAATGAAATCATTAGCAGAGTAGT 60.202 37.037 18.72 0.00 45.06 2.73
3941 9304 9.865484 GTAGTTTGAAAAGTTCTATCTGTTGTC 57.135 33.333 0.00 0.00 0.00 3.18
3970 9333 0.544357 TGTGTAGGCCCTGTACAGCT 60.544 55.000 17.86 11.58 31.00 4.24
3981 9344 0.178903 TGTACAGCTGAAGGAGGGGT 60.179 55.000 23.35 0.00 0.00 4.95
4011 9374 4.732106 CGGGAGGTCGAATGTAGC 57.268 61.111 0.00 0.00 0.00 3.58
4012 9375 2.116383 CGGGAGGTCGAATGTAGCT 58.884 57.895 0.00 0.00 0.00 3.32
4013 9376 0.249073 CGGGAGGTCGAATGTAGCTG 60.249 60.000 0.00 0.00 0.00 4.24
4014 9377 0.105039 GGGAGGTCGAATGTAGCTGG 59.895 60.000 0.00 0.00 0.00 4.85
4015 9378 0.530870 GGAGGTCGAATGTAGCTGGC 60.531 60.000 0.00 0.00 0.00 4.85
4016 9379 0.872021 GAGGTCGAATGTAGCTGGCG 60.872 60.000 0.00 0.00 0.00 5.69
4017 9380 1.141019 GGTCGAATGTAGCTGGCGA 59.859 57.895 0.00 0.00 0.00 5.54
4018 9381 0.249489 GGTCGAATGTAGCTGGCGAT 60.249 55.000 0.00 0.00 33.30 4.58
4042 9405 3.568007 TGCCGGATGTAGCCATTTAAATC 59.432 43.478 5.05 0.00 0.00 2.17
4084 9447 1.275291 GGAAATCCACACGAGACCTGA 59.725 52.381 0.00 0.00 35.64 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 1.134560 CAGCCCCGAGTACTGTTAGAC 59.865 57.143 0.00 0.00 0.00 2.59
8 9 0.179108 GCAGCCCCGAGTACTGTTAG 60.179 60.000 0.00 0.00 33.87 2.34
13 14 2.663196 GTTGCAGCCCCGAGTACT 59.337 61.111 0.00 0.00 0.00 2.73
15 16 3.712907 GGGTTGCAGCCCCGAGTA 61.713 66.667 27.46 0.00 42.89 2.59
22 23 4.660938 AAGGTCGGGGTTGCAGCC 62.661 66.667 11.82 11.82 34.31 4.85
23 24 3.056328 GAAGGTCGGGGTTGCAGC 61.056 66.667 0.00 0.00 0.00 5.25
24 25 2.742372 CGAAGGTCGGGGTTGCAG 60.742 66.667 0.00 0.00 36.00 4.41
27 28 2.742372 CTGCGAAGGTCGGGGTTG 60.742 66.667 0.00 0.00 40.84 3.77
30 31 4.473520 ATGCTGCGAAGGTCGGGG 62.474 66.667 0.00 0.00 40.84 5.73
31 32 3.197790 CATGCTGCGAAGGTCGGG 61.198 66.667 0.00 0.00 40.84 5.14
32 33 1.699656 CTTCATGCTGCGAAGGTCGG 61.700 60.000 8.79 0.00 40.84 4.79
33 34 1.712081 CTTCATGCTGCGAAGGTCG 59.288 57.895 8.79 0.00 43.89 4.79
34 35 1.427020 GCTTCATGCTGCGAAGGTC 59.573 57.895 15.79 1.11 40.23 3.85
35 36 2.042831 GGCTTCATGCTGCGAAGGT 61.043 57.895 15.79 0.00 40.23 3.50
37 38 2.796651 GGGCTTCATGCTGCGAAG 59.203 61.111 11.46 11.46 42.31 3.79
38 39 3.126879 CGGGCTTCATGCTGCGAA 61.127 61.111 0.00 0.00 42.39 4.70
57 58 4.435436 TCAGCACACTAGCGCGGG 62.435 66.667 8.83 0.61 40.15 6.13
59 60 3.549150 GCTCAGCACACTAGCGCG 61.549 66.667 0.00 0.00 40.15 6.86
60 61 3.191539 GGCTCAGCACACTAGCGC 61.192 66.667 0.00 0.00 40.15 5.92
61 62 2.819117 TTCGGCTCAGCACACTAGCG 62.819 60.000 0.00 0.00 40.15 4.26
62 63 1.079819 TTCGGCTCAGCACACTAGC 60.080 57.895 0.00 0.00 35.47 3.42
63 64 0.244994 AGTTCGGCTCAGCACACTAG 59.755 55.000 0.00 0.00 0.00 2.57
65 66 1.005630 GAGTTCGGCTCAGCACACT 60.006 57.895 0.00 0.00 43.58 3.55
67 68 2.049156 CGAGTTCGGCTCAGCACA 60.049 61.111 0.00 0.00 44.33 4.57
77 78 1.079819 ATGTGGTCAGCCGAGTTCG 60.080 57.895 0.00 0.00 37.67 3.95
79 80 0.036952 CTCATGTGGTCAGCCGAGTT 60.037 55.000 0.00 0.00 37.67 3.01
81 82 1.153489 CCTCATGTGGTCAGCCGAG 60.153 63.158 5.61 0.00 37.67 4.63
82 83 1.191489 TTCCTCATGTGGTCAGCCGA 61.191 55.000 13.34 0.00 37.67 5.54
83 84 1.021390 GTTCCTCATGTGGTCAGCCG 61.021 60.000 13.34 0.00 37.67 5.52
85 86 1.160137 GTGTTCCTCATGTGGTCAGC 58.840 55.000 13.34 0.00 0.00 4.26
86 87 2.420642 CTGTGTTCCTCATGTGGTCAG 58.579 52.381 13.34 12.77 0.00 3.51
87 88 1.543208 GCTGTGTTCCTCATGTGGTCA 60.543 52.381 13.34 10.94 0.00 4.02
90 91 0.603707 ACGCTGTGTTCCTCATGTGG 60.604 55.000 7.52 7.52 0.00 4.17
91 92 0.792640 GACGCTGTGTTCCTCATGTG 59.207 55.000 0.00 0.00 0.00 3.21
92 93 0.392706 TGACGCTGTGTTCCTCATGT 59.607 50.000 0.00 0.00 0.00 3.21
93 94 1.395954 CATGACGCTGTGTTCCTCATG 59.604 52.381 6.42 6.42 0.00 3.07
94 95 1.002430 ACATGACGCTGTGTTCCTCAT 59.998 47.619 0.00 0.00 0.00 2.90
95 96 0.392706 ACATGACGCTGTGTTCCTCA 59.607 50.000 0.00 0.00 0.00 3.86
96 97 0.792640 CACATGACGCTGTGTTCCTC 59.207 55.000 0.00 0.00 41.29 3.71
97 98 0.603707 CCACATGACGCTGTGTTCCT 60.604 55.000 0.00 0.00 44.04 3.36
98 99 1.577328 CCCACATGACGCTGTGTTCC 61.577 60.000 0.00 0.00 44.04 3.62
101 102 1.301716 GTCCCACATGACGCTGTGT 60.302 57.895 0.00 0.00 44.04 3.72
108 109 1.079127 CAGACCCGTCCCACATGAC 60.079 63.158 0.00 0.00 0.00 3.06
109 110 2.954684 GCAGACCCGTCCCACATGA 61.955 63.158 0.00 0.00 0.00 3.07
110 111 2.436646 GCAGACCCGTCCCACATG 60.437 66.667 0.00 0.00 0.00 3.21
111 112 2.607750 AGCAGACCCGTCCCACAT 60.608 61.111 0.00 0.00 0.00 3.21
112 113 3.311110 GAGCAGACCCGTCCCACA 61.311 66.667 0.00 0.00 0.00 4.17
114 115 2.997315 CAGAGCAGACCCGTCCCA 60.997 66.667 0.00 0.00 0.00 4.37
116 117 3.695606 TGCAGAGCAGACCCGTCC 61.696 66.667 0.00 0.00 33.32 4.79
127 128 4.093952 CAAACGGCGGCTGCAGAG 62.094 66.667 24.97 14.49 45.35 3.35
139 140 2.127758 GTCGCTTCCGTGCAAACG 60.128 61.111 0.00 0.00 35.54 3.60
140 141 1.082756 CAGTCGCTTCCGTGCAAAC 60.083 57.895 0.00 0.00 35.54 2.93
142 143 2.108157 ACAGTCGCTTCCGTGCAA 59.892 55.556 0.00 0.00 35.54 4.08
143 144 2.434658 ATCACAGTCGCTTCCGTGCA 62.435 55.000 0.00 0.00 35.54 4.57
144 145 1.291877 AATCACAGTCGCTTCCGTGC 61.292 55.000 0.00 0.00 35.54 5.34
145 146 1.136252 CAAATCACAGTCGCTTCCGTG 60.136 52.381 0.00 0.00 35.54 4.94
146 147 1.148310 CAAATCACAGTCGCTTCCGT 58.852 50.000 0.00 0.00 35.54 4.69
147 148 1.428448 TCAAATCACAGTCGCTTCCG 58.572 50.000 0.00 0.00 0.00 4.30
148 149 3.067106 TCTTCAAATCACAGTCGCTTCC 58.933 45.455 0.00 0.00 0.00 3.46
150 151 3.438087 CCATCTTCAAATCACAGTCGCTT 59.562 43.478 0.00 0.00 0.00 4.68
151 152 3.005554 CCATCTTCAAATCACAGTCGCT 58.994 45.455 0.00 0.00 0.00 4.93
152 153 3.002791 TCCATCTTCAAATCACAGTCGC 58.997 45.455 0.00 0.00 0.00 5.19
154 155 6.510799 CGCTATTCCATCTTCAAATCACAGTC 60.511 42.308 0.00 0.00 0.00 3.51
156 157 5.525012 TCGCTATTCCATCTTCAAATCACAG 59.475 40.000 0.00 0.00 0.00 3.66
157 158 5.427378 TCGCTATTCCATCTTCAAATCACA 58.573 37.500 0.00 0.00 0.00 3.58
159 160 6.348498 TCTTCGCTATTCCATCTTCAAATCA 58.652 36.000 0.00 0.00 0.00 2.57
160 161 6.851222 TCTTCGCTATTCCATCTTCAAATC 57.149 37.500 0.00 0.00 0.00 2.17
161 162 8.370940 TCTATCTTCGCTATTCCATCTTCAAAT 58.629 33.333 0.00 0.00 0.00 2.32
164 165 6.901081 TCTATCTTCGCTATTCCATCTTCA 57.099 37.500 0.00 0.00 0.00 3.02
165 166 9.296400 GTATTCTATCTTCGCTATTCCATCTTC 57.704 37.037 0.00 0.00 0.00 2.87
167 168 7.147811 GGGTATTCTATCTTCGCTATTCCATCT 60.148 40.741 0.00 0.00 0.00 2.90
168 169 6.981559 GGGTATTCTATCTTCGCTATTCCATC 59.018 42.308 0.00 0.00 0.00 3.51
169 170 6.670027 AGGGTATTCTATCTTCGCTATTCCAT 59.330 38.462 0.00 0.00 0.00 3.41
170 171 6.017192 AGGGTATTCTATCTTCGCTATTCCA 58.983 40.000 0.00 0.00 0.00 3.53
171 172 6.532988 AGGGTATTCTATCTTCGCTATTCC 57.467 41.667 0.00 0.00 0.00 3.01
172 173 7.197703 GCTAGGGTATTCTATCTTCGCTATTC 58.802 42.308 0.00 0.00 0.00 1.75
175 176 4.948621 GGCTAGGGTATTCTATCTTCGCTA 59.051 45.833 0.00 0.00 0.00 4.26
177 178 3.119065 GGGCTAGGGTATTCTATCTTCGC 60.119 52.174 0.00 0.00 0.00 4.70
178 179 3.128938 CGGGCTAGGGTATTCTATCTTCG 59.871 52.174 0.00 0.00 0.00 3.79
179 180 4.082136 CACGGGCTAGGGTATTCTATCTTC 60.082 50.000 0.00 0.00 0.00 2.87
180 181 3.833070 CACGGGCTAGGGTATTCTATCTT 59.167 47.826 0.00 0.00 0.00 2.40
181 182 3.075582 TCACGGGCTAGGGTATTCTATCT 59.924 47.826 0.00 0.00 0.00 1.98
183 184 3.537795 TCACGGGCTAGGGTATTCTAT 57.462 47.619 0.00 0.00 0.00 1.98
184 185 3.162666 CATCACGGGCTAGGGTATTCTA 58.837 50.000 0.00 0.00 0.00 2.10
185 186 1.971357 CATCACGGGCTAGGGTATTCT 59.029 52.381 0.00 0.00 0.00 2.40
186 187 1.608283 GCATCACGGGCTAGGGTATTC 60.608 57.143 0.00 0.00 0.00 1.75
188 189 0.762842 TGCATCACGGGCTAGGGTAT 60.763 55.000 0.00 0.00 0.00 2.73
189 190 1.382009 TGCATCACGGGCTAGGGTA 60.382 57.895 0.00 0.00 0.00 3.69
190 191 2.687200 TGCATCACGGGCTAGGGT 60.687 61.111 0.00 0.00 0.00 4.34
191 192 2.203070 GTGCATCACGGGCTAGGG 60.203 66.667 0.00 0.00 0.00 3.53
192 193 1.522355 CAGTGCATCACGGGCTAGG 60.522 63.158 0.00 0.00 39.64 3.02
193 194 0.105593 ATCAGTGCATCACGGGCTAG 59.894 55.000 0.00 0.00 39.64 3.42
195 196 1.450848 CATCAGTGCATCACGGGCT 60.451 57.895 0.00 0.00 39.64 5.19
196 197 0.461870 TACATCAGTGCATCACGGGC 60.462 55.000 0.00 0.00 39.64 6.13
197 198 2.245159 ATACATCAGTGCATCACGGG 57.755 50.000 0.00 0.00 39.64 5.28
225 226 3.938334 GCCTTCAAAAACAATGTGTGGTT 59.062 39.130 0.00 0.00 39.53 3.67
226 227 3.055530 TGCCTTCAAAAACAATGTGTGGT 60.056 39.130 0.00 0.00 0.00 4.16
230 231 3.803778 GGACTGCCTTCAAAAACAATGTG 59.196 43.478 0.00 0.00 0.00 3.21
231 232 3.450457 TGGACTGCCTTCAAAAACAATGT 59.550 39.130 0.00 0.00 34.31 2.71
232 233 4.057406 TGGACTGCCTTCAAAAACAATG 57.943 40.909 0.00 0.00 34.31 2.82
234 235 3.450457 ACATGGACTGCCTTCAAAAACAA 59.550 39.130 0.00 0.00 34.31 2.83
235 236 3.030291 ACATGGACTGCCTTCAAAAACA 58.970 40.909 0.00 0.00 34.31 2.83
236 237 3.733443 ACATGGACTGCCTTCAAAAAC 57.267 42.857 0.00 0.00 34.31 2.43
237 238 6.418057 AAATACATGGACTGCCTTCAAAAA 57.582 33.333 0.00 0.00 34.31 1.94
238 239 6.183360 ACAAAATACATGGACTGCCTTCAAAA 60.183 34.615 0.00 0.00 34.31 2.44
239 240 5.304101 ACAAAATACATGGACTGCCTTCAAA 59.696 36.000 0.00 0.00 34.31 2.69
241 242 4.218200 CACAAAATACATGGACTGCCTTCA 59.782 41.667 0.00 0.00 34.31 3.02
243 244 4.406456 TCACAAAATACATGGACTGCCTT 58.594 39.130 0.00 0.00 34.31 4.35
244 245 4.032960 TCACAAAATACATGGACTGCCT 57.967 40.909 0.00 0.00 34.31 4.75
245 246 4.737054 CTTCACAAAATACATGGACTGCC 58.263 43.478 0.00 0.00 0.00 4.85
246 247 4.168760 GCTTCACAAAATACATGGACTGC 58.831 43.478 0.00 0.00 0.00 4.40
247 248 4.406069 CGCTTCACAAAATACATGGACTG 58.594 43.478 0.00 0.00 0.00 3.51
249 250 3.119849 AGCGCTTCACAAAATACATGGAC 60.120 43.478 2.64 0.00 0.00 4.02
250 251 3.081061 AGCGCTTCACAAAATACATGGA 58.919 40.909 2.64 0.00 0.00 3.41
251 252 3.173599 CAGCGCTTCACAAAATACATGG 58.826 45.455 7.50 0.00 0.00 3.66
252 253 3.825308 ACAGCGCTTCACAAAATACATG 58.175 40.909 7.50 0.00 0.00 3.21
255 256 4.663636 AGTACAGCGCTTCACAAAATAC 57.336 40.909 7.50 0.58 0.00 1.89
256 257 5.682943 AAAGTACAGCGCTTCACAAAATA 57.317 34.783 7.50 0.00 0.00 1.40
258 259 4.364415 AAAAGTACAGCGCTTCACAAAA 57.636 36.364 7.50 0.00 0.00 2.44
259 260 5.682943 ATAAAAGTACAGCGCTTCACAAA 57.317 34.783 7.50 0.00 0.00 2.83
260 261 5.468746 AGAATAAAAGTACAGCGCTTCACAA 59.531 36.000 7.50 0.00 0.00 3.33
263 264 8.978539 CATATAGAATAAAAGTACAGCGCTTCA 58.021 33.333 7.50 0.00 0.00 3.02
264 265 8.979574 ACATATAGAATAAAAGTACAGCGCTTC 58.020 33.333 7.50 0.75 0.00 3.86
266 267 8.361139 AGACATATAGAATAAAAGTACAGCGCT 58.639 33.333 2.64 2.64 0.00 5.92
267 268 8.522178 AGACATATAGAATAAAAGTACAGCGC 57.478 34.615 0.00 0.00 0.00 5.92
294 295 9.177608 CCATCCAAAAGAAGTTACAATCTATCA 57.822 33.333 0.00 0.00 0.00 2.15
297 298 9.444600 GTACCATCCAAAAGAAGTTACAATCTA 57.555 33.333 0.00 0.00 0.00 1.98
298 299 7.942341 TGTACCATCCAAAAGAAGTTACAATCT 59.058 33.333 0.00 0.00 0.00 2.40
301 302 8.472007 AATGTACCATCCAAAAGAAGTTACAA 57.528 30.769 0.00 0.00 0.00 2.41
302 303 8.472007 AAATGTACCATCCAAAAGAAGTTACA 57.528 30.769 0.00 0.00 0.00 2.41
303 304 9.758651 AAAAATGTACCATCCAAAAGAAGTTAC 57.241 29.630 0.00 0.00 0.00 2.50
348 349 8.990163 TCTGGAGTAAAAATGGAGTTTAGTTT 57.010 30.769 0.00 0.00 0.00 2.66
350 351 7.974504 TCTCTGGAGTAAAAATGGAGTTTAGT 58.025 34.615 0.00 0.00 0.00 2.24
351 352 9.454859 AATCTCTGGAGTAAAAATGGAGTTTAG 57.545 33.333 0.00 0.00 0.00 1.85
353 354 7.394641 GGAATCTCTGGAGTAAAAATGGAGTTT 59.605 37.037 0.00 0.00 0.00 2.66
354 355 6.887002 GGAATCTCTGGAGTAAAAATGGAGTT 59.113 38.462 0.00 0.00 0.00 3.01
355 356 6.012508 TGGAATCTCTGGAGTAAAAATGGAGT 60.013 38.462 0.00 0.00 0.00 3.85
356 357 6.317391 GTGGAATCTCTGGAGTAAAAATGGAG 59.683 42.308 0.00 0.00 0.00 3.86
357 358 6.180472 GTGGAATCTCTGGAGTAAAAATGGA 58.820 40.000 0.00 0.00 0.00 3.41
359 360 5.874810 TCGTGGAATCTCTGGAGTAAAAATG 59.125 40.000 0.00 0.00 0.00 2.32
361 362 5.477607 TCGTGGAATCTCTGGAGTAAAAA 57.522 39.130 0.00 0.00 0.00 1.94
362 363 5.221561 TGTTCGTGGAATCTCTGGAGTAAAA 60.222 40.000 0.00 0.00 0.00 1.52
363 364 4.282449 TGTTCGTGGAATCTCTGGAGTAAA 59.718 41.667 0.00 0.00 0.00 2.01
365 366 3.427573 TGTTCGTGGAATCTCTGGAGTA 58.572 45.455 0.00 0.00 0.00 2.59
366 367 2.248248 TGTTCGTGGAATCTCTGGAGT 58.752 47.619 0.00 0.00 0.00 3.85
367 368 3.193263 CATGTTCGTGGAATCTCTGGAG 58.807 50.000 0.00 0.00 0.00 3.86
368 369 2.093500 CCATGTTCGTGGAATCTCTGGA 60.093 50.000 5.20 0.00 42.02 3.86
369 370 2.283298 CCATGTTCGTGGAATCTCTGG 58.717 52.381 5.20 0.00 42.02 3.86
370 371 2.674852 CACCATGTTCGTGGAATCTCTG 59.325 50.000 16.70 1.26 42.02 3.35
379 380 1.148310 GACTCACCACCATGTTCGTG 58.852 55.000 0.00 0.00 0.00 4.35
380 381 0.034896 GGACTCACCACCATGTTCGT 59.965 55.000 0.00 0.00 38.79 3.85
381 382 0.673644 GGGACTCACCACCATGTTCG 60.674 60.000 0.00 0.00 41.20 3.95
382 383 0.400213 TGGGACTCACCACCATGTTC 59.600 55.000 0.00 0.00 41.20 3.18
383 384 0.850100 TTGGGACTCACCACCATGTT 59.150 50.000 0.00 0.00 41.03 2.71
385 386 0.401738 ACTTGGGACTCACCACCATG 59.598 55.000 0.00 0.00 41.03 3.66
386 387 1.149101 AACTTGGGACTCACCACCAT 58.851 50.000 0.00 0.00 41.03 3.55
388 389 1.133915 TGAAACTTGGGACTCACCACC 60.134 52.381 0.00 0.00 41.03 4.61
389 390 2.222027 CTGAAACTTGGGACTCACCAC 58.778 52.381 0.00 0.00 41.03 4.16
391 392 2.640316 ACTGAAACTTGGGACTCACC 57.360 50.000 0.00 0.00 38.08 4.02
392 393 4.602340 TCTACTGAAACTTGGGACTCAC 57.398 45.455 0.00 0.00 0.00 3.51
393 394 4.593206 ACATCTACTGAAACTTGGGACTCA 59.407 41.667 0.00 0.00 0.00 3.41
394 395 5.153950 ACATCTACTGAAACTTGGGACTC 57.846 43.478 0.00 0.00 0.00 3.36
395 396 5.046520 GGTACATCTACTGAAACTTGGGACT 60.047 44.000 0.00 0.00 0.00 3.85
397 398 5.091552 AGGTACATCTACTGAAACTTGGGA 58.908 41.667 0.00 0.00 0.00 4.37
398 399 5.187967 AGAGGTACATCTACTGAAACTTGGG 59.812 44.000 8.58 0.00 0.00 4.12
399 400 6.102663 CAGAGGTACATCTACTGAAACTTGG 58.897 44.000 10.15 0.00 0.00 3.61
400 401 5.578727 GCAGAGGTACATCTACTGAAACTTG 59.421 44.000 10.15 0.00 0.00 3.16
401 402 5.246203 TGCAGAGGTACATCTACTGAAACTT 59.754 40.000 10.15 0.00 0.00 2.66
404 405 5.479306 GTTGCAGAGGTACATCTACTGAAA 58.521 41.667 10.15 0.00 0.00 2.69
405 406 4.081642 GGTTGCAGAGGTACATCTACTGAA 60.082 45.833 10.15 0.00 0.00 3.02
406 407 3.447586 GGTTGCAGAGGTACATCTACTGA 59.552 47.826 10.15 0.00 0.00 3.41
407 408 3.195610 TGGTTGCAGAGGTACATCTACTG 59.804 47.826 10.15 0.09 0.00 2.74
409 410 3.887621 TGGTTGCAGAGGTACATCTAC 57.112 47.619 10.15 5.16 0.00 2.59
410 411 4.290093 AGATGGTTGCAGAGGTACATCTA 58.710 43.478 10.15 0.00 42.12 1.98
413 414 4.202398 CCATAGATGGTTGCAGAGGTACAT 60.202 45.833 0.00 0.00 43.05 2.29
414 415 3.134623 CCATAGATGGTTGCAGAGGTACA 59.865 47.826 0.00 0.00 43.05 2.90
415 416 3.733337 CCATAGATGGTTGCAGAGGTAC 58.267 50.000 0.00 0.00 43.05 3.34
425 426 9.650013 CGAGAGCGAATATGTCCATAGATGGTT 62.650 44.444 8.40 0.00 43.79 3.67
426 427 8.282576 CGAGAGCGAATATGTCCATAGATGGT 62.283 46.154 8.40 0.00 43.79 3.55
429 430 4.097135 CCGAGAGCGAATATGTCCATAGAT 59.903 45.833 0.00 0.00 40.82 1.98
431 432 3.428180 CCCGAGAGCGAATATGTCCATAG 60.428 52.174 0.00 0.00 40.82 2.23
433 434 1.273606 CCCGAGAGCGAATATGTCCAT 59.726 52.381 0.00 0.00 40.82 3.41
435 436 0.674534 ACCCGAGAGCGAATATGTCC 59.325 55.000 0.00 0.00 40.82 4.02
436 437 3.502920 CATACCCGAGAGCGAATATGTC 58.497 50.000 0.00 0.00 40.82 3.06
437 438 2.352814 GCATACCCGAGAGCGAATATGT 60.353 50.000 0.00 0.00 40.82 2.29
438 439 2.263077 GCATACCCGAGAGCGAATATG 58.737 52.381 0.00 0.00 40.82 1.78
439 440 1.893137 TGCATACCCGAGAGCGAATAT 59.107 47.619 0.00 0.00 40.82 1.28
440 441 1.269723 CTGCATACCCGAGAGCGAATA 59.730 52.381 0.00 0.00 40.82 1.75
441 442 0.032678 CTGCATACCCGAGAGCGAAT 59.967 55.000 0.00 0.00 40.82 3.34
444 445 1.589993 CACTGCATACCCGAGAGCG 60.590 63.158 0.00 0.00 37.24 5.03
447 448 0.973632 ACAACACTGCATACCCGAGA 59.026 50.000 0.00 0.00 0.00 4.04
448 449 1.066858 AGACAACACTGCATACCCGAG 60.067 52.381 0.00 0.00 0.00 4.63
449 450 0.973632 AGACAACACTGCATACCCGA 59.026 50.000 0.00 0.00 0.00 5.14
450 451 1.464608 CAAGACAACACTGCATACCCG 59.535 52.381 0.00 0.00 0.00 5.28
451 452 2.504367 ACAAGACAACACTGCATACCC 58.496 47.619 0.00 0.00 0.00 3.69
456 457 3.342719 TCTTCAACAAGACAACACTGCA 58.657 40.909 0.00 0.00 33.38 4.41
457 458 4.274459 AGATCTTCAACAAGACAACACTGC 59.726 41.667 0.00 0.00 41.64 4.40
459 460 6.375455 ACAAAGATCTTCAACAAGACAACACT 59.625 34.615 8.78 0.00 41.64 3.55
461 462 6.757897 ACAAAGATCTTCAACAAGACAACA 57.242 33.333 8.78 0.00 41.64 3.33
462 463 9.736023 ATTAACAAAGATCTTCAACAAGACAAC 57.264 29.630 8.78 0.00 41.64 3.32
466 467 9.748708 CCAAATTAACAAAGATCTTCAACAAGA 57.251 29.630 8.78 0.00 43.06 3.02
468 469 9.883142 AACCAAATTAACAAAGATCTTCAACAA 57.117 25.926 8.78 1.98 0.00 2.83
469 470 9.311916 CAACCAAATTAACAAAGATCTTCAACA 57.688 29.630 8.78 0.00 0.00 3.33
470 471 8.764287 CCAACCAAATTAACAAAGATCTTCAAC 58.236 33.333 8.78 0.00 0.00 3.18
472 473 7.288852 TCCCAACCAAATTAACAAAGATCTTCA 59.711 33.333 8.78 0.00 0.00 3.02
473 474 7.666623 TCCCAACCAAATTAACAAAGATCTTC 58.333 34.615 8.78 0.00 0.00 2.87
475 476 6.782494 ACTCCCAACCAAATTAACAAAGATCT 59.218 34.615 0.00 0.00 0.00 2.75
477 478 6.994421 ACTCCCAACCAAATTAACAAAGAT 57.006 33.333 0.00 0.00 0.00 2.40
478 479 6.460399 CGAACTCCCAACCAAATTAACAAAGA 60.460 38.462 0.00 0.00 0.00 2.52
479 480 5.689961 CGAACTCCCAACCAAATTAACAAAG 59.310 40.000 0.00 0.00 0.00 2.77
480 481 5.452077 CCGAACTCCCAACCAAATTAACAAA 60.452 40.000 0.00 0.00 0.00 2.83
481 482 4.038162 CCGAACTCCCAACCAAATTAACAA 59.962 41.667 0.00 0.00 0.00 2.83
482 483 3.570550 CCGAACTCCCAACCAAATTAACA 59.429 43.478 0.00 0.00 0.00 2.41
483 484 3.570975 ACCGAACTCCCAACCAAATTAAC 59.429 43.478 0.00 0.00 0.00 2.01
485 486 3.512219 ACCGAACTCCCAACCAAATTA 57.488 42.857 0.00 0.00 0.00 1.40
486 487 2.375014 ACCGAACTCCCAACCAAATT 57.625 45.000 0.00 0.00 0.00 1.82
487 488 2.158519 AGAACCGAACTCCCAACCAAAT 60.159 45.455 0.00 0.00 0.00 2.32
489 490 0.841289 AGAACCGAACTCCCAACCAA 59.159 50.000 0.00 0.00 0.00 3.67
490 491 0.841289 AAGAACCGAACTCCCAACCA 59.159 50.000 0.00 0.00 0.00 3.67
491 492 1.520494 GAAGAACCGAACTCCCAACC 58.480 55.000 0.00 0.00 0.00 3.77
492 493 1.202722 TGGAAGAACCGAACTCCCAAC 60.203 52.381 0.00 0.00 42.61 3.77
493 494 1.133363 TGGAAGAACCGAACTCCCAA 58.867 50.000 0.00 0.00 42.61 4.12
494 495 1.358152 ATGGAAGAACCGAACTCCCA 58.642 50.000 0.00 0.00 42.61 4.37
495 496 2.084546 CAATGGAAGAACCGAACTCCC 58.915 52.381 0.00 0.00 42.61 4.30
496 497 2.084546 CCAATGGAAGAACCGAACTCC 58.915 52.381 0.00 0.00 42.61 3.85
497 498 2.084546 CCCAATGGAAGAACCGAACTC 58.915 52.381 0.00 0.00 42.61 3.01
498 499 1.423921 ACCCAATGGAAGAACCGAACT 59.576 47.619 0.00 0.00 42.61 3.01
501 502 2.542550 TCTACCCAATGGAAGAACCGA 58.457 47.619 0.00 0.00 42.61 4.69
503 504 7.712204 TTTAATTCTACCCAATGGAAGAACC 57.288 36.000 15.90 0.00 39.54 3.62
504 505 8.749354 ACATTTAATTCTACCCAATGGAAGAAC 58.251 33.333 15.90 0.00 30.29 3.01
505 506 8.893563 ACATTTAATTCTACCCAATGGAAGAA 57.106 30.769 15.91 15.91 30.29 2.52
506 507 8.748412 CAACATTTAATTCTACCCAATGGAAGA 58.252 33.333 0.00 0.00 30.29 2.87
507 508 8.748412 TCAACATTTAATTCTACCCAATGGAAG 58.252 33.333 0.00 0.00 30.29 3.46
508 509 8.657387 TCAACATTTAATTCTACCCAATGGAA 57.343 30.769 0.00 0.00 34.81 3.53
510 511 7.341769 TCCTCAACATTTAATTCTACCCAATGG 59.658 37.037 0.00 0.00 37.80 3.16
511 512 8.292444 TCCTCAACATTTAATTCTACCCAATG 57.708 34.615 0.00 0.00 0.00 2.82
512 513 7.561356 CCTCCTCAACATTTAATTCTACCCAAT 59.439 37.037 0.00 0.00 0.00 3.16
513 514 6.889722 CCTCCTCAACATTTAATTCTACCCAA 59.110 38.462 0.00 0.00 0.00 4.12
514 515 6.216662 TCCTCCTCAACATTTAATTCTACCCA 59.783 38.462 0.00 0.00 0.00 4.51
515 516 6.659824 TCCTCCTCAACATTTAATTCTACCC 58.340 40.000 0.00 0.00 0.00 3.69
516 517 6.768381 CCTCCTCCTCAACATTTAATTCTACC 59.232 42.308 0.00 0.00 0.00 3.18
517 518 7.565680 TCCTCCTCCTCAACATTTAATTCTAC 58.434 38.462 0.00 0.00 0.00 2.59
520 521 6.830838 ACATCCTCCTCCTCAACATTTAATTC 59.169 38.462 0.00 0.00 0.00 2.17
521 522 6.735556 ACATCCTCCTCCTCAACATTTAATT 58.264 36.000 0.00 0.00 0.00 1.40
522 523 6.332976 ACATCCTCCTCCTCAACATTTAAT 57.667 37.500 0.00 0.00 0.00 1.40
523 524 5.779241 ACATCCTCCTCCTCAACATTTAA 57.221 39.130 0.00 0.00 0.00 1.52
540 541 5.505654 CCCTTTTGCGAACATATGTACATCC 60.506 44.000 12.68 0.00 0.00 3.51
541 542 5.295787 TCCCTTTTGCGAACATATGTACATC 59.704 40.000 12.68 2.26 0.00 3.06
544 545 5.751243 ATCCCTTTTGCGAACATATGTAC 57.249 39.130 9.21 2.70 0.00 2.90
620 621 5.174395 TGTGGTGTTTGATTCTTTGTTTGG 58.826 37.500 0.00 0.00 0.00 3.28
650 651 1.945776 GACGTCAAGTGCACGCTAGC 61.946 60.000 11.55 4.06 41.10 3.42
673 674 6.321690 AGTCTGAAGCGTAACCTCTATGTTAT 59.678 38.462 0.00 0.00 33.58 1.89
674 675 5.651139 AGTCTGAAGCGTAACCTCTATGTTA 59.349 40.000 0.00 0.00 0.00 2.41
711 721 4.086457 TGTGTGCTATCTGACCAAGTCTA 58.914 43.478 0.00 0.00 33.15 2.59
749 759 2.375509 CTCCTAGGTGGGAAAACAAGGT 59.624 50.000 9.08 0.00 34.66 3.50
800 810 8.682710 GGTTAGAGCATAAACCAAATGACAATA 58.317 33.333 8.70 0.00 43.84 1.90
801 811 7.363793 GGGTTAGAGCATAAACCAAATGACAAT 60.364 37.037 10.14 0.00 45.79 2.71
802 812 6.071616 GGGTTAGAGCATAAACCAAATGACAA 60.072 38.462 10.14 0.00 45.79 3.18
818 828 3.371285 CGCTAAACAGAAAGGGTTAGAGC 59.629 47.826 2.36 0.00 35.56 4.09
857 867 0.968901 TCCAGTGTAGACGCCGGATT 60.969 55.000 5.05 0.00 0.00 3.01
963 973 3.838565 TCTCGAAATCTCCTAGCCAGAT 58.161 45.455 0.00 0.00 31.51 2.90
965 975 4.599047 AATCTCGAAATCTCCTAGCCAG 57.401 45.455 0.00 0.00 0.00 4.85
966 976 4.893524 TGTAATCTCGAAATCTCCTAGCCA 59.106 41.667 0.00 0.00 0.00 4.75
967 977 5.455056 TGTAATCTCGAAATCTCCTAGCC 57.545 43.478 0.00 0.00 0.00 3.93
968 978 6.508777 AGTTGTAATCTCGAAATCTCCTAGC 58.491 40.000 0.00 0.00 0.00 3.42
969 979 7.976734 ACAAGTTGTAATCTCGAAATCTCCTAG 59.023 37.037 6.75 0.00 0.00 3.02
970 980 7.837863 ACAAGTTGTAATCTCGAAATCTCCTA 58.162 34.615 6.75 0.00 0.00 2.94
972 982 6.969828 ACAAGTTGTAATCTCGAAATCTCC 57.030 37.500 6.75 0.00 0.00 3.71
973 983 8.690680 ACTACAAGTTGTAATCTCGAAATCTC 57.309 34.615 16.26 0.00 31.67 2.75
975 985 9.570488 AGTACTACAAGTTGTAATCTCGAAATC 57.430 33.333 16.26 0.45 31.67 2.17
986 996 8.703336 CGACGCTATATAGTACTACAAGTTGTA 58.297 37.037 14.85 14.85 0.00 2.41
987 997 7.439356 TCGACGCTATATAGTACTACAAGTTGT 59.561 37.037 14.05 14.05 0.00 3.32
988 998 7.790974 TCGACGCTATATAGTACTACAAGTTG 58.209 38.462 4.31 0.00 0.00 3.16
989 999 7.117523 CCTCGACGCTATATAGTACTACAAGTT 59.882 40.741 4.31 0.00 0.00 2.66
990 1000 6.589523 CCTCGACGCTATATAGTACTACAAGT 59.410 42.308 4.31 0.25 0.00 3.16
991 1001 6.589523 ACCTCGACGCTATATAGTACTACAAG 59.410 42.308 4.31 4.35 0.00 3.16
1008 1018 1.853319 GTCAGCAAACACCTCGACG 59.147 57.895 0.00 0.00 0.00 5.12
1033 4539 0.875474 ATTTGCTGCGGTGTGTTTGC 60.875 50.000 0.00 0.00 0.00 3.68
1089 4598 6.607600 TGGAATAGTAGTACAGAAGCATGAGT 59.392 38.462 2.52 0.00 0.00 3.41
1090 4599 7.043961 TGGAATAGTAGTACAGAAGCATGAG 57.956 40.000 2.52 0.00 0.00 2.90
1101 4613 7.176865 TGCAGAGACCATATGGAATAGTAGTAC 59.823 40.741 28.77 7.83 38.94 2.73
1102 4614 7.176865 GTGCAGAGACCATATGGAATAGTAGTA 59.823 40.741 28.77 8.15 38.94 1.82
1103 4615 6.015010 GTGCAGAGACCATATGGAATAGTAGT 60.015 42.308 28.77 2.49 38.94 2.73
1341 4862 2.741092 GTGAACCGGGTGAGCTCA 59.259 61.111 13.74 13.74 0.00 4.26
1755 5295 1.860676 GACGCAGGTCAACACTTGTA 58.139 50.000 0.00 0.00 42.91 2.41
1916 5477 3.370104 CCAATAATTGGCCCAGTTACCA 58.630 45.455 0.00 0.00 45.17 3.25
1958 5522 0.032952 TCGACGGACTCCAACAAAGG 59.967 55.000 0.00 0.00 0.00 3.11
2019 5583 3.634910 ACCCAATATGTTTACGGCCATTC 59.365 43.478 2.24 0.00 0.00 2.67
2040 6914 1.261619 GCACGTGCCAGCTTATGATAC 59.738 52.381 30.12 0.00 34.31 2.24
2067 6941 5.351458 AGCTTGTTTTCTTCTGCGAATTTT 58.649 33.333 0.00 0.00 0.00 1.82
2148 7028 6.957631 TGGAACCAGCTTGAATCTCTTTATA 58.042 36.000 0.00 0.00 0.00 0.98
2265 7311 1.153289 CAGGTTCCTCTGGCCATCG 60.153 63.158 5.51 0.00 0.00 3.84
2295 7341 2.674563 TTTCGTCCCACCACCAGCAG 62.675 60.000 0.00 0.00 0.00 4.24
2463 7724 9.057365 CATGTTTACCATTACGTATGAACAAAC 57.943 33.333 7.92 10.28 34.27 2.93
2630 7904 2.489971 CGAAGTCACCTAACTTGGCAA 58.510 47.619 0.00 0.00 39.55 4.52
2879 8159 0.755698 GTCTACGGCCTCCAGGATCA 60.756 60.000 0.00 0.00 37.39 2.92
2993 8273 3.755628 CGGTGATGGACGGTCGGT 61.756 66.667 1.43 0.00 0.00 4.69
3073 8353 2.664436 GCCGTTAGTGTGTCACCGC 61.664 63.158 0.00 0.00 34.49 5.68
3086 8366 3.877508 GAGCTACAAAGATAATGGCCGTT 59.122 43.478 16.02 16.02 0.00 4.44
3089 8369 6.404074 GCATATGAGCTACAAAGATAATGGCC 60.404 42.308 6.97 0.00 0.00 5.36
3106 8386 4.963318 TCCCCAACTAGAAGCATATGAG 57.037 45.455 6.97 0.00 0.00 2.90
3156 8437 5.521906 TTATGACCTGACACATAGCTCTC 57.478 43.478 0.00 0.00 31.95 3.20
3224 8505 3.693085 GAGCTTTCATGATTTGGCTCTCA 59.307 43.478 21.55 0.00 41.71 3.27
3238 8519 3.746045 ACAGTCTTTACCGAGCTTTCA 57.254 42.857 0.00 0.00 0.00 2.69
3275 8556 5.166398 ACCGTTTACTTAATGTTCTCGAGG 58.834 41.667 13.56 0.00 0.00 4.63
3307 8588 2.559698 TTGTCAATCTCGCCAAAGGA 57.440 45.000 0.00 0.00 0.00 3.36
3314 8595 2.808543 AGTTCACCTTTGTCAATCTCGC 59.191 45.455 0.00 0.00 0.00 5.03
3354 8635 5.066246 GTCTCGGCATAGTAAGTGTAAGTCT 59.934 44.000 0.00 0.00 0.00 3.24
3362 8643 3.890147 CCTTAGGTCTCGGCATAGTAAGT 59.110 47.826 0.00 0.00 0.00 2.24
3416 8698 2.432628 GGAGTCGTCAACCGCCAG 60.433 66.667 0.00 0.00 36.19 4.85
3434 8716 0.451783 CAAAGGGCGCCAACTATCAC 59.548 55.000 30.85 8.01 0.00 3.06
3588 8870 2.093658 AGGGTTGTATGAAGTGGCGTAG 60.094 50.000 0.00 0.00 0.00 3.51
3635 8917 2.158519 GGAGGAAGGTGACAGGGAAAAA 60.159 50.000 0.00 0.00 0.00 1.94
3636 8918 1.423921 GGAGGAAGGTGACAGGGAAAA 59.576 52.381 0.00 0.00 0.00 2.29
3637 8919 1.064825 GGAGGAAGGTGACAGGGAAA 58.935 55.000 0.00 0.00 0.00 3.13
3638 8920 1.192146 CGGAGGAAGGTGACAGGGAA 61.192 60.000 0.00 0.00 0.00 3.97
3639 8921 1.609501 CGGAGGAAGGTGACAGGGA 60.610 63.158 0.00 0.00 0.00 4.20
3640 8922 2.982130 CGGAGGAAGGTGACAGGG 59.018 66.667 0.00 0.00 0.00 4.45
3641 8923 2.266055 GCGGAGGAAGGTGACAGG 59.734 66.667 0.00 0.00 0.00 4.00
3642 8924 2.266055 GGCGGAGGAAGGTGACAG 59.734 66.667 0.00 0.00 0.00 3.51
3643 8925 3.691342 CGGCGGAGGAAGGTGACA 61.691 66.667 0.00 0.00 0.00 3.58
3657 8939 2.746277 AATGTGAGGAACGGCGGC 60.746 61.111 13.24 0.00 0.00 6.53
3658 8940 0.390603 TACAATGTGAGGAACGGCGG 60.391 55.000 13.24 0.00 0.00 6.13
3659 8941 0.719465 GTACAATGTGAGGAACGGCG 59.281 55.000 4.80 4.80 0.00 6.46
3660 8942 1.732259 CAGTACAATGTGAGGAACGGC 59.268 52.381 0.00 0.00 0.00 5.68
3661 8943 1.732259 GCAGTACAATGTGAGGAACGG 59.268 52.381 0.00 0.00 0.00 4.44
3662 8944 1.732259 GGCAGTACAATGTGAGGAACG 59.268 52.381 0.00 0.00 0.00 3.95
3663 8945 1.732259 CGGCAGTACAATGTGAGGAAC 59.268 52.381 0.00 0.00 0.00 3.62
3664 8946 1.943968 GCGGCAGTACAATGTGAGGAA 60.944 52.381 0.00 0.00 0.00 3.36
3665 8947 0.391130 GCGGCAGTACAATGTGAGGA 60.391 55.000 0.00 0.00 0.00 3.71
3666 8948 1.369091 GGCGGCAGTACAATGTGAGG 61.369 60.000 3.07 0.00 0.00 3.86
3667 8949 1.695893 CGGCGGCAGTACAATGTGAG 61.696 60.000 10.53 0.00 0.00 3.51
3668 8950 1.739929 CGGCGGCAGTACAATGTGA 60.740 57.895 10.53 0.00 0.00 3.58
3669 8951 2.784596 CGGCGGCAGTACAATGTG 59.215 61.111 10.53 0.00 0.00 3.21
3670 8952 3.124921 GCGGCGGCAGTACAATGT 61.125 61.111 9.78 0.00 39.62 2.71
3671 8953 3.876198 GGCGGCGGCAGTACAATG 61.876 66.667 29.41 0.00 42.47 2.82
3754 9107 4.586001 AGTTTCTAGTCCAACGGAGTAACA 59.414 41.667 0.00 0.00 45.00 2.41
3787 9140 0.753262 GCACGTCCCATATGACTCCT 59.247 55.000 3.65 0.00 32.97 3.69
3788 9141 0.249911 GGCACGTCCCATATGACTCC 60.250 60.000 3.65 0.00 32.97 3.85
3789 9142 0.464036 TGGCACGTCCCATATGACTC 59.536 55.000 3.65 0.00 32.97 3.36
3791 9144 1.160329 GCTGGCACGTCCCATATGAC 61.160 60.000 0.00 0.00 33.64 3.06
3827 9189 6.469782 AATGTCTTAAATATTGCAGGTGGG 57.530 37.500 0.00 0.00 0.00 4.61
3877 9239 5.298777 TCATTTGGCCACCTTTTGAATTTTG 59.701 36.000 3.88 0.00 0.00 2.44
3910 9272 8.439286 CAGATAGAACTTTTCAAACTACTCTGC 58.561 37.037 0.00 0.00 0.00 4.26
3916 9279 9.832445 AGACAACAGATAGAACTTTTCAAACTA 57.168 29.630 0.00 0.00 0.00 2.24
3927 9290 5.313712 TGGGGAAAAGACAACAGATAGAAC 58.686 41.667 0.00 0.00 0.00 3.01
3941 9304 1.474330 GGCCTACACATGGGGAAAAG 58.526 55.000 0.00 0.00 0.00 2.27
3945 9308 2.000701 CAGGGCCTACACATGGGGA 61.001 63.158 5.28 0.00 0.00 4.81
3970 9333 0.396695 CGTAGCCTACCCCTCCTTCA 60.397 60.000 0.00 0.00 0.00 3.02
3991 9354 0.669077 CTACATTCGACCTCCCGGAG 59.331 60.000 0.73 7.56 0.00 4.63
3992 9355 1.389609 GCTACATTCGACCTCCCGGA 61.390 60.000 0.73 0.00 0.00 5.14
3994 9357 0.249073 CAGCTACATTCGACCTCCCG 60.249 60.000 0.00 0.00 0.00 5.14
3995 9358 0.105039 CCAGCTACATTCGACCTCCC 59.895 60.000 0.00 0.00 0.00 4.30
3996 9359 0.530870 GCCAGCTACATTCGACCTCC 60.531 60.000 0.00 0.00 0.00 4.30
3997 9360 0.872021 CGCCAGCTACATTCGACCTC 60.872 60.000 0.00 0.00 0.00 3.85
3998 9361 1.141881 CGCCAGCTACATTCGACCT 59.858 57.895 0.00 0.00 0.00 3.85
3999 9362 0.249489 ATCGCCAGCTACATTCGACC 60.249 55.000 0.00 0.00 31.74 4.79
4000 9363 2.417339 TATCGCCAGCTACATTCGAC 57.583 50.000 0.00 0.00 31.74 4.20
4001 9364 2.926586 GCATATCGCCAGCTACATTCGA 60.927 50.000 0.00 0.00 32.94 3.71
4002 9365 1.391485 GCATATCGCCAGCTACATTCG 59.609 52.381 0.00 0.00 32.94 3.34
4014 9377 1.084370 GGCTACATCCGGCATATCGC 61.084 60.000 0.00 0.00 41.28 4.58
4015 9378 0.246360 TGGCTACATCCGGCATATCG 59.754 55.000 0.00 0.00 31.50 2.92
4016 9379 2.698855 ATGGCTACATCCGGCATATC 57.301 50.000 0.00 0.00 44.57 1.63
4017 9380 3.439857 AAATGGCTACATCCGGCATAT 57.560 42.857 0.00 0.00 45.50 1.78
4018 9381 2.949177 AAATGGCTACATCCGGCATA 57.051 45.000 0.00 0.00 45.50 3.14
4042 9405 4.495679 CCAACATCGTACGATTTTCCATGG 60.496 45.833 27.49 20.21 31.62 3.66
4084 9447 2.489619 GGGCCATATGATGACACCATGT 60.490 50.000 4.39 0.00 32.09 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.