Multiple sequence alignment - TraesCS3D01G466300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G466300 chr3D 100.000 3420 0 0 1 3420 569899230 569902649 0.000000e+00 6316.0
1 TraesCS3D01G466300 chr3D 93.301 418 26 2 568 985 25941911 25941496 1.740000e-172 616.0
2 TraesCS3D01G466300 chr3D 87.856 527 29 17 941 1438 567400226 567399706 1.370000e-163 586.0
3 TraesCS3D01G466300 chr3D 91.603 262 11 4 124 377 567408313 567408055 5.430000e-93 351.0
4 TraesCS3D01G466300 chr3D 90.411 219 18 3 565 782 567404303 567404087 5.590000e-73 285.0
5 TraesCS3D01G466300 chr3D 90.291 103 9 1 1 102 567408406 567408304 2.140000e-27 134.0
6 TraesCS3D01G466300 chr3A 90.982 1985 142 20 939 2907 702553673 702555636 0.000000e+00 2639.0
7 TraesCS3D01G466300 chr3A 88.679 424 39 7 424 839 702553183 702553605 3.040000e-140 508.0
8 TraesCS3D01G466300 chr3A 93.651 315 20 0 63 377 702552751 702553065 3.990000e-129 472.0
9 TraesCS3D01G466300 chr3A 90.323 124 7 3 3074 3196 61800146 61800265 1.270000e-34 158.0
10 TraesCS3D01G466300 chrUn 86.374 1776 188 33 1328 3071 287225064 287226817 0.000000e+00 1890.0
11 TraesCS3D01G466300 chrUn 86.374 1776 188 33 1328 3071 287476962 287478715 0.000000e+00 1890.0
12 TraesCS3D01G466300 chrUn 86.282 1786 189 35 1328 3080 323542291 323540529 0.000000e+00 1890.0
13 TraesCS3D01G466300 chrUn 87.829 1635 156 25 1328 2932 341148701 341147080 0.000000e+00 1877.0
14 TraesCS3D01G466300 chrUn 90.780 705 55 6 1171 1866 311734908 311735611 0.000000e+00 933.0
15 TraesCS3D01G466300 chrUn 90.780 705 55 6 1171 1866 311738782 311739485 0.000000e+00 933.0
16 TraesCS3D01G466300 chrUn 80.983 773 92 35 430 1191 311734142 311734870 2.300000e-156 562.0
17 TraesCS3D01G466300 chrUn 80.983 773 92 35 430 1191 311738016 311738744 2.300000e-156 562.0
18 TraesCS3D01G466300 chrUn 83.114 533 64 18 567 1088 474549687 474549170 2.400000e-126 462.0
19 TraesCS3D01G466300 chrUn 81.081 370 36 11 1 368 311737484 311737821 7.280000e-67 265.0
20 TraesCS3D01G466300 chrUn 80.811 370 37 10 1 368 311733611 311733948 3.390000e-65 259.0
21 TraesCS3D01G466300 chr3B 87.611 1582 151 29 1224 2795 756613654 756615200 0.000000e+00 1794.0
22 TraesCS3D01G466300 chr3B 81.673 562 85 15 557 1110 756612791 756613342 5.200000e-123 451.0
23 TraesCS3D01G466300 chr3B 78.100 379 41 22 1 377 756612215 756612553 5.790000e-48 202.0
24 TraesCS3D01G466300 chr3B 96.429 56 2 0 3141 3196 499987607 499987662 3.630000e-15 93.5
25 TraesCS3D01G466300 chr7D 91.282 390 25 3 596 985 435723429 435723049 1.090000e-144 523.0
26 TraesCS3D01G466300 chr7D 96.923 195 5 1 3223 3416 409485809 409486003 3.290000e-85 326.0
27 TraesCS3D01G466300 chr7A 98.446 193 2 1 3223 3414 159552215 159552407 4.230000e-89 339.0
28 TraesCS3D01G466300 chr7A 96.970 198 6 0 3223 3420 468939415 468939218 1.970000e-87 333.0
29 TraesCS3D01G466300 chr7A 89.516 124 8 3 3074 3196 720591252 720591133 5.910000e-33 152.0
30 TraesCS3D01G466300 chr7A 94.318 88 4 1 3074 3160 10809896 10809983 2.140000e-27 134.0
31 TraesCS3D01G466300 chr6D 96.970 198 6 0 3223 3420 371534988 371535185 1.970000e-87 333.0
32 TraesCS3D01G466300 chr6B 97.436 195 4 1 3223 3416 506267238 506267432 7.070000e-87 331.0
33 TraesCS3D01G466300 chr6B 96.465 198 7 0 3223 3420 694442522 694442325 9.150000e-86 327.0
34 TraesCS3D01G466300 chr5D 96.923 195 6 0 3226 3420 398907367 398907173 9.150000e-86 327.0
35 TraesCS3D01G466300 chr5D 95.960 198 8 0 3223 3420 398424304 398424501 4.260000e-84 322.0
36 TraesCS3D01G466300 chr2D 96.465 198 7 0 3223 3420 413780174 413780371 9.150000e-86 327.0
37 TraesCS3D01G466300 chr1A 91.129 124 6 3 3074 3196 388493174 388493055 2.730000e-36 163.0
38 TraesCS3D01G466300 chr1A 90.323 124 7 3 3074 3196 331637186 331637067 1.270000e-34 158.0
39 TraesCS3D01G466300 chr5A 95.455 88 3 1 3074 3160 405466189 405466276 4.600000e-29 139.0
40 TraesCS3D01G466300 chr2B 98.214 56 1 0 3141 3196 22979134 22979189 7.810000e-17 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G466300 chr3D 569899230 569902649 3419 False 6316.000000 6316 100.000000 1 3420 1 chr3D.!!$F1 3419
1 TraesCS3D01G466300 chr3D 567399706 567408406 8700 True 339.000000 586 90.040250 1 1438 4 chr3D.!!$R2 1437
2 TraesCS3D01G466300 chr3A 702552751 702555636 2885 False 1206.333333 2639 91.104000 63 2907 3 chr3A.!!$F2 2844
3 TraesCS3D01G466300 chrUn 287225064 287226817 1753 False 1890.000000 1890 86.374000 1328 3071 1 chrUn.!!$F1 1743
4 TraesCS3D01G466300 chrUn 287476962 287478715 1753 False 1890.000000 1890 86.374000 1328 3071 1 chrUn.!!$F2 1743
5 TraesCS3D01G466300 chrUn 323540529 323542291 1762 True 1890.000000 1890 86.282000 1328 3080 1 chrUn.!!$R1 1752
6 TraesCS3D01G466300 chrUn 341147080 341148701 1621 True 1877.000000 1877 87.829000 1328 2932 1 chrUn.!!$R2 1604
7 TraesCS3D01G466300 chrUn 311733611 311739485 5874 False 585.666667 933 84.236333 1 1866 6 chrUn.!!$F3 1865
8 TraesCS3D01G466300 chrUn 474549170 474549687 517 True 462.000000 462 83.114000 567 1088 1 chrUn.!!$R3 521
9 TraesCS3D01G466300 chr3B 756612215 756615200 2985 False 815.666667 1794 82.461333 1 2795 3 chr3B.!!$F2 2794

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
841 8490 0.449388 GCCCGAGCTTTGAATCAGTG 59.551 55.0 0.0 0.0 35.5 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2440 14254 1.027357 AAGCAAAGCAGTCACACCAG 58.973 50.0 0.0 0.0 0.0 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 1.508088 GTGCTCCTTTTCGCCATGG 59.492 57.895 7.63 7.63 0.00 3.66
79 81 1.129437 GAGAGCTCATGGTTTTCGTGC 59.871 52.381 17.77 0.00 32.54 5.34
84 94 2.476854 GCTCATGGTTTTCGTGCTGATC 60.477 50.000 0.00 0.00 32.54 2.92
96 106 2.159043 CGTGCTGATCATACTCCTGGTT 60.159 50.000 0.00 0.00 0.00 3.67
101 111 5.604231 TGCTGATCATACTCCTGGTTAGAAT 59.396 40.000 0.00 0.00 0.00 2.40
161 171 6.929625 AGGTGATTAAGATATGATCAGACCG 58.070 40.000 0.09 0.00 34.97 4.79
199 209 7.453752 TCATGATCAGATCATCCTTCTACATCA 59.546 37.037 21.30 0.00 46.62 3.07
229 239 1.205460 ACCGTGCCTTCCATAGGGTT 61.205 55.000 0.00 0.00 44.91 4.11
266 276 2.245159 TTCACACCACTCTTCAGCTG 57.755 50.000 7.63 7.63 0.00 4.24
330 349 6.899393 TCAAATAGATGTCCTTTTGCTTGT 57.101 33.333 0.00 0.00 0.00 3.16
331 350 7.994425 TCAAATAGATGTCCTTTTGCTTGTA 57.006 32.000 0.00 0.00 0.00 2.41
363 382 4.637977 TGCAGTGTGAATGTTCTTTACACA 59.362 37.500 13.29 0.00 42.93 3.72
614 4475 8.917088 CCACTCCCAATAAGAATAAAATGTGAT 58.083 33.333 0.00 0.00 0.00 3.06
765 4629 6.000219 ACATGTCTGCTGATCTAAAACAACT 59.000 36.000 0.00 0.00 0.00 3.16
770 4634 8.364894 TGTCTGCTGATCTAAAACAACTACTAA 58.635 33.333 0.00 0.00 0.00 2.24
795 8430 4.758165 AGTGACGGGTTGTTAAACTATTGG 59.242 41.667 0.00 0.00 36.48 3.16
798 8433 3.253921 ACGGGTTGTTAAACTATTGGCAC 59.746 43.478 0.00 0.00 36.48 5.01
808 8443 8.052748 TGTTAAACTATTGGCACATCCTTATCT 58.947 33.333 0.00 0.00 39.30 1.98
822 8457 8.400947 CACATCCTTATCTGTAGTTGAATTTGG 58.599 37.037 0.00 0.00 0.00 3.28
825 8460 5.067805 CCTTATCTGTAGTTGAATTTGGCCC 59.932 44.000 0.00 0.00 0.00 5.80
826 8461 2.432444 TCTGTAGTTGAATTTGGCCCG 58.568 47.619 0.00 0.00 0.00 6.13
841 8490 0.449388 GCCCGAGCTTTGAATCAGTG 59.551 55.000 0.00 0.00 35.50 3.66
842 8491 1.089920 CCCGAGCTTTGAATCAGTGG 58.910 55.000 0.00 0.00 0.00 4.00
846 8495 3.125316 CCGAGCTTTGAATCAGTGGTTAC 59.875 47.826 0.00 0.00 0.00 2.50
850 8499 6.568462 CGAGCTTTGAATCAGTGGTTACATTT 60.568 38.462 0.00 0.00 0.00 2.32
851 8500 7.360861 CGAGCTTTGAATCAGTGGTTACATTTA 60.361 37.037 0.00 0.00 0.00 1.40
852 8501 8.177119 AGCTTTGAATCAGTGGTTACATTTAA 57.823 30.769 0.00 0.00 0.00 1.52
853 8502 8.637986 AGCTTTGAATCAGTGGTTACATTTAAA 58.362 29.630 0.00 0.00 0.00 1.52
855 8504 9.965824 CTTTGAATCAGTGGTTACATTTAAAGT 57.034 29.630 9.07 0.00 31.79 2.66
861 8510 8.570068 TCAGTGGTTACATTTAAAGTATTCCC 57.430 34.615 0.00 0.01 0.00 3.97
863 8512 8.674607 CAGTGGTTACATTTAAAGTATTCCCTC 58.325 37.037 0.00 0.75 0.00 4.30
864 8513 7.551617 AGTGGTTACATTTAAAGTATTCCCTCG 59.448 37.037 0.00 0.00 0.00 4.63
866 8515 6.825213 GGTTACATTTAAAGTATTCCCTCGGT 59.175 38.462 0.00 0.00 0.00 4.69
867 8516 7.337689 GGTTACATTTAAAGTATTCCCTCGGTT 59.662 37.037 0.00 0.00 0.00 4.44
868 8517 6.753107 ACATTTAAAGTATTCCCTCGGTTG 57.247 37.500 0.00 0.00 0.00 3.77
869 8518 6.243148 ACATTTAAAGTATTCCCTCGGTTGT 58.757 36.000 0.00 0.00 0.00 3.32
870 8519 6.717997 ACATTTAAAGTATTCCCTCGGTTGTT 59.282 34.615 0.00 0.00 0.00 2.83
871 8520 7.231925 ACATTTAAAGTATTCCCTCGGTTGTTT 59.768 33.333 0.00 0.00 0.00 2.83
872 8521 8.732531 CATTTAAAGTATTCCCTCGGTTGTTTA 58.267 33.333 0.00 0.00 0.00 2.01
873 8522 8.688747 TTTAAAGTATTCCCTCGGTTGTTTAA 57.311 30.769 0.00 0.00 0.00 1.52
874 8523 8.688747 TTAAAGTATTCCCTCGGTTGTTTAAA 57.311 30.769 0.00 0.00 0.00 1.52
875 8524 6.812879 AAGTATTCCCTCGGTTGTTTAAAG 57.187 37.500 0.00 0.00 0.00 1.85
876 8525 6.117975 AGTATTCCCTCGGTTGTTTAAAGA 57.882 37.500 0.00 0.00 0.00 2.52
877 8526 6.718294 AGTATTCCCTCGGTTGTTTAAAGAT 58.282 36.000 0.00 0.00 0.00 2.40
878 8527 6.822170 AGTATTCCCTCGGTTGTTTAAAGATC 59.178 38.462 0.00 0.00 0.00 2.75
891 8540 0.627451 AAAGATCAGCAGCCATCCCA 59.373 50.000 0.00 0.00 0.00 4.37
894 8543 0.822532 GATCAGCAGCCATCCCAAGG 60.823 60.000 0.00 0.00 0.00 3.61
918 8567 4.837972 AGCAGAGGGAAATAAGAACTGAC 58.162 43.478 0.00 0.00 0.00 3.51
922 8571 6.395629 CAGAGGGAAATAAGAACTGACGTTA 58.604 40.000 0.00 0.00 32.39 3.18
924 8573 7.549488 CAGAGGGAAATAAGAACTGACGTTAAT 59.451 37.037 0.00 0.00 32.39 1.40
938 8587 7.265673 ACTGACGTTAATGTACATCATTAGCT 58.734 34.615 9.23 0.00 45.80 3.32
944 8593 2.917933 TGTACATCATTAGCTGTGGCC 58.082 47.619 0.00 0.00 39.73 5.36
948 8597 1.134007 CATCATTAGCTGTGGCCTCCA 60.134 52.381 3.32 0.00 39.73 3.86
963 8612 3.481453 GCCTCCAAATCTGGTTCTATCC 58.519 50.000 0.00 0.00 43.97 2.59
999 8649 0.673644 GCCTCGCTCTAACCAAAGCA 60.674 55.000 0.00 0.00 38.45 3.91
1012 8662 1.259609 CAAAGCAATGGCCTCCAAGA 58.740 50.000 3.32 0.00 42.56 3.02
1050 8700 1.889170 CAAGGACAAGGGGAAAGAAGC 59.111 52.381 0.00 0.00 0.00 3.86
1093 8743 9.832445 GTATTCAGGTATCCTATTCTTTGACAA 57.168 33.333 0.00 0.00 29.64 3.18
1150 8822 7.960738 TGTTCATAATGTAGTTTTTCTTAGCGC 59.039 33.333 0.00 0.00 0.00 5.92
1167 9030 3.318017 AGCGCGAGTTCATAATATGACC 58.682 45.455 12.10 0.00 39.39 4.02
1168 9031 3.005897 AGCGCGAGTTCATAATATGACCT 59.994 43.478 12.10 0.73 39.39 3.85
1169 9032 4.217767 AGCGCGAGTTCATAATATGACCTA 59.782 41.667 12.10 0.00 39.39 3.08
1212 9133 6.573712 AGGAGAATTGAGGAAGCTAAGAAT 57.426 37.500 0.00 0.00 0.00 2.40
1467 13275 2.113139 CAGCCACCACCGGAACTT 59.887 61.111 9.46 0.00 0.00 2.66
1485 13293 3.541632 ACTTTGTGTGTTCCTCAACGAT 58.458 40.909 0.00 0.00 34.95 3.73
1601 13409 4.312443 TCGTTTTACGAGAGGCTTTTCAT 58.688 39.130 0.00 0.00 46.73 2.57
1660 13468 1.860484 GCACTGGCTCTCAAAGGTGC 61.860 60.000 0.00 0.00 42.04 5.01
1683 13495 0.897621 TGTGACACTGCTCGATGGAT 59.102 50.000 7.20 0.00 0.00 3.41
1684 13496 1.134995 TGTGACACTGCTCGATGGATC 60.135 52.381 7.20 0.00 0.00 3.36
1737 13549 5.453567 ACCAAAACCTTTATCTTGACAGC 57.546 39.130 0.00 0.00 0.00 4.40
1781 13593 2.028930 CCAGATCCCGGCTTACTACATC 60.029 54.545 0.00 0.00 0.00 3.06
1847 13659 5.105756 GGCTTATGCACAACAGTTTAGGAAT 60.106 40.000 2.72 0.00 41.91 3.01
1850 13662 7.629222 GCTTATGCACAACAGTTTAGGAATGAT 60.629 37.037 0.00 0.00 39.41 2.45
2003 13815 2.975489 CCTTATGGCCTCAGAGGTACAT 59.025 50.000 23.86 23.86 37.80 2.29
2006 13818 3.567478 ATGGCCTCAGAGGTACATTTC 57.433 47.619 18.37 0.00 37.80 2.17
2007 13819 1.207089 TGGCCTCAGAGGTACATTTCG 59.793 52.381 18.37 0.00 37.80 3.46
2009 13821 2.541556 GCCTCAGAGGTACATTTCGTC 58.458 52.381 18.37 0.00 37.80 4.20
2051 13865 9.961265 AATTTTATCACTGCTAATGATCACATG 57.039 29.630 0.00 0.00 37.89 3.21
2055 13869 5.354767 TCACTGCTAATGATCACATGAGTC 58.645 41.667 0.00 0.00 37.33 3.36
2056 13870 4.510711 CACTGCTAATGATCACATGAGTCC 59.489 45.833 0.00 0.00 37.33 3.85
2065 13879 5.668471 TGATCACATGAGTCCTTGATCTTC 58.332 41.667 17.62 0.66 43.21 2.87
2075 13889 4.163078 AGTCCTTGATCTTCCGTGATGATT 59.837 41.667 0.00 0.00 0.00 2.57
2078 13892 5.061853 CCTTGATCTTCCGTGATGATTGAT 58.938 41.667 0.00 0.00 0.00 2.57
2440 14254 1.571460 GATTGATGATCGTGGCCGC 59.429 57.895 6.11 6.11 0.00 6.53
2517 14333 3.614870 GCCGTTGATTTCTTCAAGGCAAT 60.615 43.478 16.76 0.00 46.66 3.56
2608 14481 7.077605 ACAACATGTTCACACTTCATTAATCG 58.922 34.615 8.48 0.00 0.00 3.34
2613 14486 9.986833 CATGTTCACACTTCATTAATCGATTTA 57.013 29.630 17.19 7.76 0.00 1.40
2636 14509 2.683211 ATTGGAGTGGGCTTTCTTGT 57.317 45.000 0.00 0.00 0.00 3.16
2768 14641 2.224185 TGTCCAAGTACATGTTCACGCT 60.224 45.455 2.30 0.00 0.00 5.07
2771 14644 3.006003 TCCAAGTACATGTTCACGCTACA 59.994 43.478 2.30 0.00 0.00 2.74
2788 14661 6.037172 CACGCTACAACCATATTCTAGCTTTT 59.963 38.462 0.00 0.00 0.00 2.27
2868 14741 0.034477 ACCTTAATTCAGGCCCGTGG 60.034 55.000 5.55 0.00 37.47 4.94
2884 14757 2.263077 CGTGGCTGTCACTGTATTCTC 58.737 52.381 11.02 0.00 43.94 2.87
2886 14759 3.257393 GTGGCTGTCACTGTATTCTCAG 58.743 50.000 4.90 0.00 42.86 3.35
2896 14769 5.465390 TCACTGTATTCTCAGTTTTTGTCCG 59.535 40.000 0.00 0.00 44.92 4.79
2920 14795 1.552337 TCATGCTCCTGACTCTGTTCC 59.448 52.381 0.00 0.00 0.00 3.62
2931 14806 1.271597 ACTCTGTTCCATCAGCCCAAC 60.272 52.381 0.00 0.00 35.63 3.77
2932 14807 1.004044 CTCTGTTCCATCAGCCCAACT 59.996 52.381 0.00 0.00 35.63 3.16
2933 14808 2.237143 CTCTGTTCCATCAGCCCAACTA 59.763 50.000 0.00 0.00 35.63 2.24
2934 14809 2.027192 TCTGTTCCATCAGCCCAACTAC 60.027 50.000 0.00 0.00 35.63 2.73
2935 14810 1.985159 TGTTCCATCAGCCCAACTACT 59.015 47.619 0.00 0.00 0.00 2.57
2936 14811 3.178046 TGTTCCATCAGCCCAACTACTA 58.822 45.455 0.00 0.00 0.00 1.82
2937 14812 3.055385 TGTTCCATCAGCCCAACTACTAC 60.055 47.826 0.00 0.00 0.00 2.73
2938 14813 1.754803 TCCATCAGCCCAACTACTACG 59.245 52.381 0.00 0.00 0.00 3.51
2939 14814 1.571919 CATCAGCCCAACTACTACGC 58.428 55.000 0.00 0.00 0.00 4.42
2940 14815 1.137086 CATCAGCCCAACTACTACGCT 59.863 52.381 0.00 0.00 0.00 5.07
2941 14816 2.133281 TCAGCCCAACTACTACGCTA 57.867 50.000 0.00 0.00 0.00 4.26
2942 14817 1.747355 TCAGCCCAACTACTACGCTAC 59.253 52.381 0.00 0.00 0.00 3.58
2943 14818 1.475280 CAGCCCAACTACTACGCTACA 59.525 52.381 0.00 0.00 0.00 2.74
2944 14819 1.749634 AGCCCAACTACTACGCTACAG 59.250 52.381 0.00 0.00 0.00 2.74
2945 14820 1.475682 GCCCAACTACTACGCTACAGT 59.524 52.381 0.00 0.00 0.00 3.55
2946 14821 2.094338 GCCCAACTACTACGCTACAGTT 60.094 50.000 0.00 0.00 0.00 3.16
2947 14822 3.615834 GCCCAACTACTACGCTACAGTTT 60.616 47.826 0.00 0.00 0.00 2.66
2948 14823 4.563061 CCCAACTACTACGCTACAGTTTT 58.437 43.478 0.00 0.00 0.00 2.43
2949 14824 4.387862 CCCAACTACTACGCTACAGTTTTG 59.612 45.833 0.00 0.00 0.00 2.44
2968 14843 1.139654 TGCATAGTGATCAGGGTCAGC 59.860 52.381 0.00 0.00 0.00 4.26
2971 14846 0.970427 TAGTGATCAGGGTCAGCGCA 60.970 55.000 11.47 0.00 0.00 6.09
2972 14847 2.103042 GTGATCAGGGTCAGCGCAC 61.103 63.158 11.47 0.00 0.00 5.34
2973 14848 2.285773 TGATCAGGGTCAGCGCACT 61.286 57.895 11.47 0.00 0.00 4.40
2974 14849 1.812922 GATCAGGGTCAGCGCACTG 60.813 63.158 11.47 9.86 45.95 3.66
2975 14850 2.513026 GATCAGGGTCAGCGCACTGT 62.513 60.000 11.47 1.14 44.77 3.55
2978 14866 1.893808 AGGGTCAGCGCACTGTTTG 60.894 57.895 11.47 0.00 44.77 2.93
2987 14875 2.629656 GCACTGTTTGGGCGATGCT 61.630 57.895 0.00 0.00 34.27 3.79
3002 14890 2.738521 GCTCGCAAGGTGCTCGAA 60.739 61.111 0.00 0.00 42.25 3.71
3003 14891 3.016474 GCTCGCAAGGTGCTCGAAC 62.016 63.158 0.00 0.00 42.25 3.95
3005 14893 1.621301 CTCGCAAGGTGCTCGAACAG 61.621 60.000 0.00 0.00 42.25 3.16
3015 14903 0.174389 GCTCGAACAGATGCCAGAGA 59.826 55.000 0.00 0.00 0.00 3.10
3016 14904 1.802136 GCTCGAACAGATGCCAGAGAG 60.802 57.143 0.00 0.00 0.00 3.20
3024 14912 4.327680 ACAGATGCCAGAGAGTAAAAACC 58.672 43.478 0.00 0.00 0.00 3.27
3036 14924 6.013812 AGAGAGTAAAAACCTGAAGATGCTCT 60.014 38.462 0.00 0.00 33.02 4.09
3051 14939 6.998968 AGATGCTCTTCAGGTAATTGAAAG 57.001 37.500 0.00 0.00 36.69 2.62
3057 14945 6.294176 GCTCTTCAGGTAATTGAAAGCTTTCA 60.294 38.462 32.86 32.86 44.78 2.69
3064 14952 2.818130 TTGAAAGCTTTCACCATGGC 57.182 45.000 35.54 11.76 45.99 4.40
3065 14953 0.597568 TGAAAGCTTTCACCATGGCG 59.402 50.000 32.86 1.26 41.88 5.69
3067 14955 0.539438 AAAGCTTTCACCATGGCGGA 60.539 50.000 13.04 7.19 38.63 5.54
3068 14956 0.323725 AAGCTTTCACCATGGCGGAT 60.324 50.000 13.04 0.00 38.63 4.18
3069 14957 1.033746 AGCTTTCACCATGGCGGATG 61.034 55.000 13.04 2.13 38.63 3.51
3076 14964 3.122850 CATGGCGGATGGGAAAGC 58.877 61.111 0.00 0.00 0.00 3.51
3077 14965 1.454479 CATGGCGGATGGGAAAGCT 60.454 57.895 0.00 0.00 0.00 3.74
3078 14966 1.454479 ATGGCGGATGGGAAAGCTG 60.454 57.895 0.00 0.00 0.00 4.24
3079 14967 2.830370 GGCGGATGGGAAAGCTGG 60.830 66.667 0.00 0.00 0.00 4.85
3080 14968 2.830370 GCGGATGGGAAAGCTGGG 60.830 66.667 0.00 0.00 0.00 4.45
3081 14969 2.998097 CGGATGGGAAAGCTGGGA 59.002 61.111 0.00 0.00 0.00 4.37
3082 14970 1.153086 CGGATGGGAAAGCTGGGAG 60.153 63.158 0.00 0.00 0.00 4.30
3083 14971 1.228510 GGATGGGAAAGCTGGGAGG 59.771 63.158 0.00 0.00 0.00 4.30
3084 14972 1.281925 GGATGGGAAAGCTGGGAGGA 61.282 60.000 0.00 0.00 0.00 3.71
3085 14973 0.849417 GATGGGAAAGCTGGGAGGAT 59.151 55.000 0.00 0.00 0.00 3.24
3086 14974 0.554792 ATGGGAAAGCTGGGAGGATG 59.445 55.000 0.00 0.00 0.00 3.51
3087 14975 0.549902 TGGGAAAGCTGGGAGGATGA 60.550 55.000 0.00 0.00 0.00 2.92
3088 14976 0.182299 GGGAAAGCTGGGAGGATGAG 59.818 60.000 0.00 0.00 0.00 2.90
3089 14977 1.207791 GGAAAGCTGGGAGGATGAGA 58.792 55.000 0.00 0.00 0.00 3.27
3090 14978 1.140652 GGAAAGCTGGGAGGATGAGAG 59.859 57.143 0.00 0.00 0.00 3.20
3091 14979 2.114616 GAAAGCTGGGAGGATGAGAGA 58.885 52.381 0.00 0.00 0.00 3.10
3092 14980 2.260639 AAGCTGGGAGGATGAGAGAA 57.739 50.000 0.00 0.00 0.00 2.87
3093 14981 1.494960 AGCTGGGAGGATGAGAGAAC 58.505 55.000 0.00 0.00 0.00 3.01
3094 14982 0.467804 GCTGGGAGGATGAGAGAACC 59.532 60.000 0.00 0.00 0.00 3.62
3095 14983 1.871418 CTGGGAGGATGAGAGAACCA 58.129 55.000 0.00 0.00 0.00 3.67
3096 14984 2.191400 CTGGGAGGATGAGAGAACCAA 58.809 52.381 0.00 0.00 0.00 3.67
3097 14985 2.573462 CTGGGAGGATGAGAGAACCAAA 59.427 50.000 0.00 0.00 0.00 3.28
3098 14986 2.573462 TGGGAGGATGAGAGAACCAAAG 59.427 50.000 0.00 0.00 0.00 2.77
3099 14987 2.092699 GGGAGGATGAGAGAACCAAAGG 60.093 54.545 0.00 0.00 0.00 3.11
3100 14988 2.840651 GGAGGATGAGAGAACCAAAGGA 59.159 50.000 0.00 0.00 0.00 3.36
3101 14989 3.118445 GGAGGATGAGAGAACCAAAGGAG 60.118 52.174 0.00 0.00 0.00 3.69
3102 14990 2.843113 AGGATGAGAGAACCAAAGGAGG 59.157 50.000 0.00 0.00 0.00 4.30
3103 14991 2.092699 GGATGAGAGAACCAAAGGAGGG 60.093 54.545 0.00 0.00 0.00 4.30
3115 15003 0.846870 AAGGAGGGGGAAGAAGTGGG 60.847 60.000 0.00 0.00 0.00 4.61
3116 15004 1.541620 GGAGGGGGAAGAAGTGGGT 60.542 63.158 0.00 0.00 0.00 4.51
3117 15005 0.253020 GGAGGGGGAAGAAGTGGGTA 60.253 60.000 0.00 0.00 0.00 3.69
3118 15006 1.628327 GGAGGGGGAAGAAGTGGGTAT 60.628 57.143 0.00 0.00 0.00 2.73
3119 15007 1.490910 GAGGGGGAAGAAGTGGGTATG 59.509 57.143 0.00 0.00 0.00 2.39
3120 15008 0.106669 GGGGGAAGAAGTGGGTATGC 60.107 60.000 0.00 0.00 0.00 3.14
3121 15009 0.463833 GGGGAAGAAGTGGGTATGCG 60.464 60.000 0.00 0.00 0.00 4.73
3122 15010 1.095807 GGGAAGAAGTGGGTATGCGC 61.096 60.000 0.00 0.00 0.00 6.09
3123 15011 1.095807 GGAAGAAGTGGGTATGCGCC 61.096 60.000 4.18 0.00 0.00 6.53
3124 15012 0.107654 GAAGAAGTGGGTATGCGCCT 60.108 55.000 4.18 0.00 0.00 5.52
3125 15013 0.392998 AAGAAGTGGGTATGCGCCTG 60.393 55.000 4.18 0.00 0.00 4.85
3126 15014 1.078426 GAAGTGGGTATGCGCCTGT 60.078 57.895 4.18 0.00 0.00 4.00
3127 15015 1.369091 GAAGTGGGTATGCGCCTGTG 61.369 60.000 4.18 0.00 0.00 3.66
3128 15016 2.046314 GTGGGTATGCGCCTGTGT 60.046 61.111 4.18 0.00 0.00 3.72
3129 15017 1.674322 GTGGGTATGCGCCTGTGTT 60.674 57.895 4.18 0.00 0.00 3.32
3130 15018 1.074072 TGGGTATGCGCCTGTGTTT 59.926 52.632 4.18 0.00 0.00 2.83
3131 15019 1.240641 TGGGTATGCGCCTGTGTTTG 61.241 55.000 4.18 0.00 0.00 2.93
3132 15020 0.958382 GGGTATGCGCCTGTGTTTGA 60.958 55.000 4.18 0.00 0.00 2.69
3133 15021 1.094785 GGTATGCGCCTGTGTTTGAT 58.905 50.000 4.18 0.00 0.00 2.57
3134 15022 2.285083 GGTATGCGCCTGTGTTTGATA 58.715 47.619 4.18 0.00 0.00 2.15
3135 15023 2.031683 GGTATGCGCCTGTGTTTGATAC 59.968 50.000 4.18 2.37 0.00 2.24
3136 15024 1.819928 ATGCGCCTGTGTTTGATACA 58.180 45.000 4.18 0.00 0.00 2.29
3137 15025 1.598882 TGCGCCTGTGTTTGATACAA 58.401 45.000 4.18 0.00 38.80 2.41
3138 15026 1.950216 TGCGCCTGTGTTTGATACAAA 59.050 42.857 4.18 0.00 38.80 2.83
3139 15027 2.359214 TGCGCCTGTGTTTGATACAAAA 59.641 40.909 4.18 0.00 38.80 2.44
3140 15028 2.979813 GCGCCTGTGTTTGATACAAAAG 59.020 45.455 0.00 0.00 38.80 2.27
3141 15029 3.550030 GCGCCTGTGTTTGATACAAAAGT 60.550 43.478 0.00 0.00 38.80 2.66
3142 15030 4.606961 CGCCTGTGTTTGATACAAAAGTT 58.393 39.130 0.00 0.00 38.80 2.66
3143 15031 5.040635 CGCCTGTGTTTGATACAAAAGTTT 58.959 37.500 0.00 0.00 38.80 2.66
3144 15032 5.518487 CGCCTGTGTTTGATACAAAAGTTTT 59.482 36.000 0.00 0.00 38.80 2.43
3145 15033 6.507771 CGCCTGTGTTTGATACAAAAGTTTTG 60.508 38.462 23.65 23.65 38.80 2.44
3146 15034 6.704819 CCTGTGTTTGATACAAAAGTTTTGC 58.295 36.000 24.86 11.76 38.80 3.68
3147 15035 6.534793 CCTGTGTTTGATACAAAAGTTTTGCT 59.465 34.615 24.86 14.44 38.80 3.91
3148 15036 7.288317 TGTGTTTGATACAAAAGTTTTGCTG 57.712 32.000 24.86 6.27 38.80 4.41
3149 15037 7.093354 TGTGTTTGATACAAAAGTTTTGCTGA 58.907 30.769 24.86 13.01 38.80 4.26
3150 15038 7.763528 TGTGTTTGATACAAAAGTTTTGCTGAT 59.236 29.630 24.86 16.58 38.80 2.90
3151 15039 8.603181 GTGTTTGATACAAAAGTTTTGCTGATT 58.397 29.630 24.86 10.26 38.80 2.57
3152 15040 8.602328 TGTTTGATACAAAAGTTTTGCTGATTG 58.398 29.630 24.86 4.16 32.64 2.67
3153 15041 8.816144 GTTTGATACAAAAGTTTTGCTGATTGA 58.184 29.630 24.86 6.50 32.43 2.57
3154 15042 8.578308 TTGATACAAAAGTTTTGCTGATTGAG 57.422 30.769 24.86 2.14 32.43 3.02
3155 15043 7.715657 TGATACAAAAGTTTTGCTGATTGAGT 58.284 30.769 24.86 7.68 32.43 3.41
3156 15044 8.196771 TGATACAAAAGTTTTGCTGATTGAGTT 58.803 29.630 24.86 7.04 32.43 3.01
3157 15045 8.947055 ATACAAAAGTTTTGCTGATTGAGTTT 57.053 26.923 24.86 6.59 32.43 2.66
3158 15046 7.064060 ACAAAAGTTTTGCTGATTGAGTTTG 57.936 32.000 24.86 0.97 32.43 2.93
3159 15047 6.873076 ACAAAAGTTTTGCTGATTGAGTTTGA 59.127 30.769 24.86 0.00 32.43 2.69
3160 15048 7.550196 ACAAAAGTTTTGCTGATTGAGTTTGAT 59.450 29.630 24.86 0.45 32.43 2.57
3161 15049 9.033481 CAAAAGTTTTGCTGATTGAGTTTGATA 57.967 29.630 15.06 0.00 30.69 2.15
3162 15050 8.579682 AAAGTTTTGCTGATTGAGTTTGATAC 57.420 30.769 0.00 0.00 0.00 2.24
3163 15051 7.516198 AGTTTTGCTGATTGAGTTTGATACT 57.484 32.000 0.00 0.00 40.71 2.12
3164 15052 7.365741 AGTTTTGCTGATTGAGTTTGATACTG 58.634 34.615 0.00 0.00 37.17 2.74
3165 15053 7.229306 AGTTTTGCTGATTGAGTTTGATACTGA 59.771 33.333 0.00 0.00 37.17 3.41
3166 15054 7.509141 TTTGCTGATTGAGTTTGATACTGAA 57.491 32.000 0.00 0.00 37.17 3.02
3167 15055 6.732531 TGCTGATTGAGTTTGATACTGAAG 57.267 37.500 0.00 0.00 37.17 3.02
3168 15056 6.233434 TGCTGATTGAGTTTGATACTGAAGT 58.767 36.000 0.00 0.00 37.17 3.01
3169 15057 6.712095 TGCTGATTGAGTTTGATACTGAAGTT 59.288 34.615 0.00 0.00 37.17 2.66
3170 15058 7.229306 TGCTGATTGAGTTTGATACTGAAGTTT 59.771 33.333 0.00 0.00 37.17 2.66
3171 15059 8.078596 GCTGATTGAGTTTGATACTGAAGTTTT 58.921 33.333 0.00 0.00 37.17 2.43
3172 15060 9.956720 CTGATTGAGTTTGATACTGAAGTTTTT 57.043 29.630 0.00 0.00 37.17 1.94
3173 15061 9.950680 TGATTGAGTTTGATACTGAAGTTTTTC 57.049 29.630 0.00 0.00 37.17 2.29
3175 15063 9.956720 ATTGAGTTTGATACTGAAGTTTTTCTG 57.043 29.630 0.00 0.00 37.17 3.02
3176 15064 8.731275 TGAGTTTGATACTGAAGTTTTTCTGA 57.269 30.769 1.91 0.00 37.17 3.27
3177 15065 8.830580 TGAGTTTGATACTGAAGTTTTTCTGAG 58.169 33.333 1.91 0.00 37.17 3.35
3178 15066 8.738645 AGTTTGATACTGAAGTTTTTCTGAGT 57.261 30.769 1.91 0.00 35.19 3.41
3179 15067 9.832445 AGTTTGATACTGAAGTTTTTCTGAGTA 57.168 29.630 1.91 0.00 35.19 2.59
3185 15073 7.118422 ACTGAAGTTTTTCTGAGTATTACGC 57.882 36.000 1.91 0.00 36.21 4.42
3186 15074 6.704493 ACTGAAGTTTTTCTGAGTATTACGCA 59.296 34.615 0.27 0.27 36.21 5.24
3187 15075 7.225931 ACTGAAGTTTTTCTGAGTATTACGCAA 59.774 33.333 1.89 0.00 36.21 4.85
3188 15076 7.349711 TGAAGTTTTTCTGAGTATTACGCAAC 58.650 34.615 1.89 0.00 34.31 4.17
3189 15077 6.237313 AGTTTTTCTGAGTATTACGCAACC 57.763 37.500 1.89 0.00 0.00 3.77
3190 15078 5.180680 AGTTTTTCTGAGTATTACGCAACCC 59.819 40.000 1.89 0.00 0.00 4.11
3191 15079 4.546829 TTTCTGAGTATTACGCAACCCT 57.453 40.909 1.89 0.00 0.00 4.34
3192 15080 4.546829 TTCTGAGTATTACGCAACCCTT 57.453 40.909 1.89 0.00 0.00 3.95
3193 15081 4.119442 TCTGAGTATTACGCAACCCTTC 57.881 45.455 1.89 0.00 0.00 3.46
3194 15082 3.767673 TCTGAGTATTACGCAACCCTTCT 59.232 43.478 1.89 0.00 0.00 2.85
3195 15083 4.222145 TCTGAGTATTACGCAACCCTTCTT 59.778 41.667 1.89 0.00 0.00 2.52
3196 15084 4.501071 TGAGTATTACGCAACCCTTCTTC 58.499 43.478 0.00 0.00 0.00 2.87
3197 15085 4.222145 TGAGTATTACGCAACCCTTCTTCT 59.778 41.667 0.00 0.00 0.00 2.85
3198 15086 5.161943 AGTATTACGCAACCCTTCTTCTT 57.838 39.130 0.00 0.00 0.00 2.52
3199 15087 5.557866 AGTATTACGCAACCCTTCTTCTTT 58.442 37.500 0.00 0.00 0.00 2.52
3200 15088 6.002082 AGTATTACGCAACCCTTCTTCTTTT 58.998 36.000 0.00 0.00 0.00 2.27
3201 15089 5.784578 ATTACGCAACCCTTCTTCTTTTT 57.215 34.783 0.00 0.00 0.00 1.94
3220 15108 4.050313 TGAGAATCACCGGGGGAG 57.950 61.111 2.42 0.00 42.56 4.30
3221 15109 1.689233 TGAGAATCACCGGGGGAGG 60.689 63.158 2.42 0.00 42.56 4.30
3222 15110 2.471084 TGAGAATCACCGGGGGAGGT 62.471 60.000 2.42 0.00 42.56 3.85
3223 15111 0.398098 GAGAATCACCGGGGGAGGTA 60.398 60.000 2.42 0.00 43.89 3.08
3224 15112 0.690077 AGAATCACCGGGGGAGGTAC 60.690 60.000 2.42 0.00 43.89 3.34
3225 15113 0.690077 GAATCACCGGGGGAGGTACT 60.690 60.000 2.42 0.00 43.89 2.73
3240 15128 4.862641 AGGTACTCAAAGTGGCCATTAT 57.137 40.909 9.72 0.00 30.42 1.28
3241 15129 4.526970 AGGTACTCAAAGTGGCCATTATG 58.473 43.478 9.72 8.60 30.42 1.90
3242 15130 3.066760 GGTACTCAAAGTGGCCATTATGC 59.933 47.826 9.72 0.00 0.00 3.14
3252 15140 1.602311 GCCATTATGCCAGGAGAGTG 58.398 55.000 0.00 0.00 0.00 3.51
3253 15141 1.141657 GCCATTATGCCAGGAGAGTGA 59.858 52.381 0.00 0.00 0.00 3.41
3254 15142 2.224719 GCCATTATGCCAGGAGAGTGAT 60.225 50.000 0.00 0.00 0.00 3.06
3255 15143 3.672808 CCATTATGCCAGGAGAGTGATC 58.327 50.000 0.00 0.00 0.00 2.92
3256 15144 3.558746 CCATTATGCCAGGAGAGTGATCC 60.559 52.174 0.00 0.00 39.89 3.36
3257 15145 2.477104 TATGCCAGGAGAGTGATCCA 57.523 50.000 0.00 0.00 42.26 3.41
3258 15146 1.129917 ATGCCAGGAGAGTGATCCAG 58.870 55.000 0.00 0.00 42.26 3.86
3259 15147 0.252421 TGCCAGGAGAGTGATCCAGT 60.252 55.000 0.00 0.00 42.26 4.00
3260 15148 0.908198 GCCAGGAGAGTGATCCAGTT 59.092 55.000 0.00 0.00 42.26 3.16
3261 15149 1.280421 GCCAGGAGAGTGATCCAGTTT 59.720 52.381 0.00 0.00 42.26 2.66
3262 15150 2.501723 GCCAGGAGAGTGATCCAGTTTA 59.498 50.000 0.00 0.00 42.26 2.01
3263 15151 3.135530 GCCAGGAGAGTGATCCAGTTTAT 59.864 47.826 0.00 0.00 42.26 1.40
3264 15152 4.345257 GCCAGGAGAGTGATCCAGTTTATA 59.655 45.833 0.00 0.00 42.26 0.98
3265 15153 5.163301 GCCAGGAGAGTGATCCAGTTTATAA 60.163 44.000 0.00 0.00 42.26 0.98
3266 15154 6.520272 CCAGGAGAGTGATCCAGTTTATAAG 58.480 44.000 0.00 0.00 42.26 1.73
3267 15155 6.463614 CCAGGAGAGTGATCCAGTTTATAAGG 60.464 46.154 0.00 0.00 42.26 2.69
3268 15156 5.604650 AGGAGAGTGATCCAGTTTATAAGGG 59.395 44.000 0.00 0.00 42.26 3.95
3269 15157 5.602978 GGAGAGTGATCCAGTTTATAAGGGA 59.397 44.000 5.41 5.41 39.34 4.20
3270 15158 6.099845 GGAGAGTGATCCAGTTTATAAGGGAA 59.900 42.308 6.67 0.00 39.34 3.97
3271 15159 7.365652 GGAGAGTGATCCAGTTTATAAGGGAAA 60.366 40.741 6.67 0.00 39.34 3.13
3272 15160 7.339482 AGAGTGATCCAGTTTATAAGGGAAAC 58.661 38.462 6.67 8.05 37.11 2.78
3285 15173 0.806868 GGGAAACCGGATCGAAAACC 59.193 55.000 9.46 0.00 43.64 3.27
3286 15174 1.612462 GGGAAACCGGATCGAAAACCT 60.612 52.381 9.46 0.00 43.64 3.50
3287 15175 2.355007 GGGAAACCGGATCGAAAACCTA 60.355 50.000 9.46 0.00 43.64 3.08
3288 15176 3.337358 GGAAACCGGATCGAAAACCTAA 58.663 45.455 9.46 0.00 0.00 2.69
3289 15177 3.752747 GGAAACCGGATCGAAAACCTAAA 59.247 43.478 9.46 0.00 0.00 1.85
3290 15178 4.378770 GGAAACCGGATCGAAAACCTAAAC 60.379 45.833 9.46 0.00 0.00 2.01
3291 15179 3.405823 ACCGGATCGAAAACCTAAACA 57.594 42.857 9.46 0.00 0.00 2.83
3292 15180 3.742385 ACCGGATCGAAAACCTAAACAA 58.258 40.909 9.46 0.00 0.00 2.83
3293 15181 3.749609 ACCGGATCGAAAACCTAAACAAG 59.250 43.478 9.46 0.00 0.00 3.16
3294 15182 3.749609 CCGGATCGAAAACCTAAACAAGT 59.250 43.478 0.00 0.00 0.00 3.16
3295 15183 4.214758 CCGGATCGAAAACCTAAACAAGTT 59.785 41.667 0.00 0.00 0.00 2.66
3296 15184 5.144359 CGGATCGAAAACCTAAACAAGTTG 58.856 41.667 0.00 0.00 0.00 3.16
3297 15185 5.049954 CGGATCGAAAACCTAAACAAGTTGA 60.050 40.000 10.54 0.00 0.00 3.18
3298 15186 6.140786 GGATCGAAAACCTAAACAAGTTGAC 58.859 40.000 10.54 0.00 0.00 3.18
3299 15187 5.488645 TCGAAAACCTAAACAAGTTGACC 57.511 39.130 10.54 0.00 0.00 4.02
3300 15188 4.336153 TCGAAAACCTAAACAAGTTGACCC 59.664 41.667 10.54 0.00 0.00 4.46
3301 15189 4.603985 GAAAACCTAAACAAGTTGACCCG 58.396 43.478 10.54 0.00 0.00 5.28
3302 15190 3.286329 AACCTAAACAAGTTGACCCGT 57.714 42.857 10.54 0.00 0.00 5.28
3303 15191 3.286329 ACCTAAACAAGTTGACCCGTT 57.714 42.857 10.54 0.00 0.00 4.44
3304 15192 3.623703 ACCTAAACAAGTTGACCCGTTT 58.376 40.909 10.54 1.80 35.79 3.60
3305 15193 4.779696 ACCTAAACAAGTTGACCCGTTTA 58.220 39.130 10.54 2.92 33.79 2.01
3306 15194 5.379187 ACCTAAACAAGTTGACCCGTTTAT 58.621 37.500 10.54 0.00 34.35 1.40
3307 15195 6.532826 ACCTAAACAAGTTGACCCGTTTATA 58.467 36.000 10.54 0.00 34.35 0.98
3308 15196 6.997476 ACCTAAACAAGTTGACCCGTTTATAA 59.003 34.615 10.54 0.00 34.35 0.98
3309 15197 7.173735 ACCTAAACAAGTTGACCCGTTTATAAG 59.826 37.037 10.54 0.00 34.35 1.73
3310 15198 5.952526 AACAAGTTGACCCGTTTATAAGG 57.047 39.130 10.54 0.00 0.00 2.69
3326 15214 2.598099 GGGAAACCGGGCCGAAAA 60.598 61.111 30.79 0.00 43.64 2.29
3327 15215 2.646719 GGAAACCGGGCCGAAAAC 59.353 61.111 30.79 15.50 0.00 2.43
3328 15216 2.646719 GAAACCGGGCCGAAAACC 59.353 61.111 30.79 8.55 0.00 3.27
3333 15221 2.357275 CGGGCCGAAAACCGTACA 60.357 61.111 24.41 0.00 44.85 2.90
3334 15222 1.960250 CGGGCCGAAAACCGTACAA 60.960 57.895 24.41 0.00 44.85 2.41
3335 15223 1.575922 GGGCCGAAAACCGTACAAC 59.424 57.895 0.00 0.00 36.31 3.32
3336 15224 1.165284 GGGCCGAAAACCGTACAACA 61.165 55.000 0.00 0.00 36.31 3.33
3337 15225 0.662085 GGCCGAAAACCGTACAACAA 59.338 50.000 0.00 0.00 36.31 2.83
3338 15226 1.334329 GGCCGAAAACCGTACAACAAG 60.334 52.381 0.00 0.00 36.31 3.16
3339 15227 1.334329 GCCGAAAACCGTACAACAAGG 60.334 52.381 0.00 0.00 36.31 3.61
3340 15228 1.941975 CCGAAAACCGTACAACAAGGT 59.058 47.619 0.00 0.00 41.27 3.50
3342 15230 3.559242 CCGAAAACCGTACAACAAGGTTA 59.441 43.478 2.98 0.00 46.84 2.85
3343 15231 4.517287 CGAAAACCGTACAACAAGGTTAC 58.483 43.478 2.98 1.40 46.84 2.50
3344 15232 4.033817 CGAAAACCGTACAACAAGGTTACA 59.966 41.667 2.98 0.00 46.84 2.41
3345 15233 5.447010 CGAAAACCGTACAACAAGGTTACAA 60.447 40.000 2.98 0.00 46.84 2.41
3346 15234 5.488645 AAACCGTACAACAAGGTTACAAG 57.511 39.130 2.98 0.00 46.84 3.16
3347 15235 3.469739 ACCGTACAACAAGGTTACAAGG 58.530 45.455 0.00 0.00 35.13 3.61
3348 15236 3.134442 ACCGTACAACAAGGTTACAAGGA 59.866 43.478 0.00 0.00 35.13 3.36
3349 15237 3.744426 CCGTACAACAAGGTTACAAGGAG 59.256 47.826 0.00 0.00 0.00 3.69
3350 15238 4.501915 CCGTACAACAAGGTTACAAGGAGA 60.502 45.833 0.00 0.00 0.00 3.71
3351 15239 5.051816 CGTACAACAAGGTTACAAGGAGAA 58.948 41.667 0.00 0.00 0.00 2.87
3352 15240 5.176958 CGTACAACAAGGTTACAAGGAGAAG 59.823 44.000 0.00 0.00 0.00 2.85
3353 15241 5.367945 ACAACAAGGTTACAAGGAGAAGA 57.632 39.130 0.00 0.00 0.00 2.87
3354 15242 5.368989 ACAACAAGGTTACAAGGAGAAGAG 58.631 41.667 0.00 0.00 0.00 2.85
3355 15243 5.130477 ACAACAAGGTTACAAGGAGAAGAGA 59.870 40.000 0.00 0.00 0.00 3.10
3356 15244 5.888982 ACAAGGTTACAAGGAGAAGAGAA 57.111 39.130 0.00 0.00 0.00 2.87
3357 15245 5.859495 ACAAGGTTACAAGGAGAAGAGAAG 58.141 41.667 0.00 0.00 0.00 2.85
3358 15246 5.602978 ACAAGGTTACAAGGAGAAGAGAAGA 59.397 40.000 0.00 0.00 0.00 2.87
3359 15247 6.099845 ACAAGGTTACAAGGAGAAGAGAAGAA 59.900 38.462 0.00 0.00 0.00 2.52
3360 15248 6.104146 AGGTTACAAGGAGAAGAGAAGAAC 57.896 41.667 0.00 0.00 0.00 3.01
3361 15249 5.602978 AGGTTACAAGGAGAAGAGAAGAACA 59.397 40.000 0.00 0.00 0.00 3.18
3362 15250 6.099845 AGGTTACAAGGAGAAGAGAAGAACAA 59.900 38.462 0.00 0.00 0.00 2.83
3363 15251 6.425417 GGTTACAAGGAGAAGAGAAGAACAAG 59.575 42.308 0.00 0.00 0.00 3.16
3364 15252 5.878406 ACAAGGAGAAGAGAAGAACAAGA 57.122 39.130 0.00 0.00 0.00 3.02
3365 15253 5.606505 ACAAGGAGAAGAGAAGAACAAGAC 58.393 41.667 0.00 0.00 0.00 3.01
3366 15254 5.129485 ACAAGGAGAAGAGAAGAACAAGACA 59.871 40.000 0.00 0.00 0.00 3.41
3367 15255 5.208463 AGGAGAAGAGAAGAACAAGACAC 57.792 43.478 0.00 0.00 0.00 3.67
3368 15256 4.039852 AGGAGAAGAGAAGAACAAGACACC 59.960 45.833 0.00 0.00 0.00 4.16
3369 15257 4.311606 GAGAAGAGAAGAACAAGACACCC 58.688 47.826 0.00 0.00 0.00 4.61
3370 15258 3.711704 AGAAGAGAAGAACAAGACACCCA 59.288 43.478 0.00 0.00 0.00 4.51
3371 15259 4.164221 AGAAGAGAAGAACAAGACACCCAA 59.836 41.667 0.00 0.00 0.00 4.12
3372 15260 3.809905 AGAGAAGAACAAGACACCCAAC 58.190 45.455 0.00 0.00 0.00 3.77
3373 15261 3.199946 AGAGAAGAACAAGACACCCAACA 59.800 43.478 0.00 0.00 0.00 3.33
3374 15262 3.945285 GAGAAGAACAAGACACCCAACAA 59.055 43.478 0.00 0.00 0.00 2.83
3375 15263 3.947834 AGAAGAACAAGACACCCAACAAG 59.052 43.478 0.00 0.00 0.00 3.16
3376 15264 2.654863 AGAACAAGACACCCAACAAGG 58.345 47.619 0.00 0.00 37.03 3.61
3385 15273 3.966543 CCAACAAGGGCGGGACCT 61.967 66.667 0.00 0.00 44.56 3.85
3386 15274 2.598787 CCAACAAGGGCGGGACCTA 61.599 63.158 0.00 0.00 40.87 3.08
3387 15275 1.078426 CAACAAGGGCGGGACCTAG 60.078 63.158 0.00 0.00 40.87 3.02
3388 15276 2.967946 AACAAGGGCGGGACCTAGC 61.968 63.158 0.00 4.26 40.87 3.42
3389 15277 3.083997 CAAGGGCGGGACCTAGCT 61.084 66.667 11.24 0.00 40.87 3.32
3390 15278 1.760875 CAAGGGCGGGACCTAGCTA 60.761 63.158 11.24 0.00 40.87 3.32
3391 15279 1.457831 AAGGGCGGGACCTAGCTAG 60.458 63.158 14.20 14.20 40.87 3.42
3392 15280 3.617735 GGGCGGGACCTAGCTAGC 61.618 72.222 15.74 6.62 39.10 3.42
3393 15281 2.838225 GGCGGGACCTAGCTAGCA 60.838 66.667 18.83 1.89 34.51 3.49
3394 15282 2.731374 GCGGGACCTAGCTAGCAG 59.269 66.667 18.83 11.93 0.00 4.24
3395 15283 1.828660 GCGGGACCTAGCTAGCAGA 60.829 63.158 18.83 3.05 0.00 4.26
3396 15284 2.034607 CGGGACCTAGCTAGCAGAC 58.965 63.158 18.83 5.47 0.00 3.51
3397 15285 0.466555 CGGGACCTAGCTAGCAGACT 60.467 60.000 18.83 0.00 0.00 3.24
3398 15286 1.202782 CGGGACCTAGCTAGCAGACTA 60.203 57.143 18.83 0.00 0.00 2.59
3399 15287 2.748798 CGGGACCTAGCTAGCAGACTAA 60.749 54.545 18.83 0.00 0.00 2.24
3400 15288 3.297736 GGGACCTAGCTAGCAGACTAAA 58.702 50.000 18.83 0.00 0.00 1.85
3401 15289 3.705072 GGGACCTAGCTAGCAGACTAAAA 59.295 47.826 18.83 0.00 0.00 1.52
3402 15290 4.202172 GGGACCTAGCTAGCAGACTAAAAG 60.202 50.000 18.83 0.16 0.00 2.27
3403 15291 4.202172 GGACCTAGCTAGCAGACTAAAAGG 60.202 50.000 18.83 11.66 32.00 3.11
3404 15292 4.611367 ACCTAGCTAGCAGACTAAAAGGA 58.389 43.478 18.83 0.00 31.01 3.36
3405 15293 4.403113 ACCTAGCTAGCAGACTAAAAGGAC 59.597 45.833 18.83 0.00 31.01 3.85
3406 15294 3.897141 AGCTAGCAGACTAAAAGGACC 57.103 47.619 18.83 0.00 0.00 4.46
3407 15295 3.173965 AGCTAGCAGACTAAAAGGACCA 58.826 45.455 18.83 0.00 0.00 4.02
3408 15296 3.777522 AGCTAGCAGACTAAAAGGACCAT 59.222 43.478 18.83 0.00 0.00 3.55
3409 15297 4.123506 GCTAGCAGACTAAAAGGACCATC 58.876 47.826 10.63 0.00 0.00 3.51
3410 15298 4.383118 GCTAGCAGACTAAAAGGACCATCA 60.383 45.833 10.63 0.00 0.00 3.07
3411 15299 3.944087 AGCAGACTAAAAGGACCATCAC 58.056 45.455 0.00 0.00 0.00 3.06
3412 15300 3.010420 GCAGACTAAAAGGACCATCACC 58.990 50.000 0.00 0.00 0.00 4.02
3413 15301 3.559171 GCAGACTAAAAGGACCATCACCA 60.559 47.826 0.00 0.00 0.00 4.17
3414 15302 4.003648 CAGACTAAAAGGACCATCACCAC 58.996 47.826 0.00 0.00 0.00 4.16
3415 15303 3.000727 GACTAAAAGGACCATCACCACG 58.999 50.000 0.00 0.00 0.00 4.94
3416 15304 2.635915 ACTAAAAGGACCATCACCACGA 59.364 45.455 0.00 0.00 0.00 4.35
3417 15305 2.649531 AAAAGGACCATCACCACGAA 57.350 45.000 0.00 0.00 0.00 3.85
3418 15306 2.649531 AAAGGACCATCACCACGAAA 57.350 45.000 0.00 0.00 0.00 3.46
3419 15307 2.185004 AAGGACCATCACCACGAAAG 57.815 50.000 0.00 0.00 0.00 2.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 1.244019 ACCATGGCGAAAAGGAGCAC 61.244 55.000 13.04 0.00 34.54 4.40
199 209 0.182775 AGGCACGGTCCAAAGTCTTT 59.817 50.000 0.00 0.00 0.00 2.52
229 239 6.370166 GGTGTGAAAATTTTGGTCAACTTTCA 59.630 34.615 8.47 9.09 0.00 2.69
266 276 7.284034 AGGTGATATGAATCAATCAAGAACCAC 59.716 37.037 8.79 0.00 43.69 4.16
305 315 7.899973 ACAAGCAAAAGGACATCTATTTGAAT 58.100 30.769 11.54 0.00 35.34 2.57
330 349 6.875948 ACATTCACACTGCATAAAGTTGTA 57.124 33.333 0.00 0.00 0.00 2.41
331 350 5.772825 ACATTCACACTGCATAAAGTTGT 57.227 34.783 0.00 0.00 0.00 3.32
387 439 1.379916 CAGGGATGGCACTGGTTGA 59.620 57.895 0.00 0.00 41.99 3.18
538 690 7.225784 TGCACAGAGGATTTTATTTTGCTAA 57.774 32.000 0.00 0.00 0.00 3.09
539 691 6.625740 GCTGCACAGAGGATTTTATTTTGCTA 60.626 38.462 0.81 0.00 0.00 3.49
540 692 5.717119 CTGCACAGAGGATTTTATTTTGCT 58.283 37.500 0.00 0.00 0.00 3.91
541 693 4.328169 GCTGCACAGAGGATTTTATTTTGC 59.672 41.667 0.81 0.00 0.00 3.68
542 694 4.866486 GGCTGCACAGAGGATTTTATTTTG 59.134 41.667 0.50 0.00 0.00 2.44
543 695 4.527816 TGGCTGCACAGAGGATTTTATTTT 59.472 37.500 0.50 0.00 0.00 1.82
547 706 2.040278 AGTGGCTGCACAGAGGATTTTA 59.960 45.455 0.50 0.00 0.00 1.52
551 712 1.298993 CAGTGGCTGCACAGAGGAT 59.701 57.895 0.50 0.00 0.00 3.24
555 716 1.047801 TTCTACAGTGGCTGCACAGA 58.952 50.000 0.50 0.00 34.37 3.41
744 4608 6.759272 AGTAGTTGTTTTAGATCAGCAGACA 58.241 36.000 0.00 0.00 0.00 3.41
765 4629 7.895759 AGTTTAACAACCCGTCACTATTAGTA 58.104 34.615 0.00 0.00 32.70 1.82
770 4634 6.596497 CCAATAGTTTAACAACCCGTCACTAT 59.404 38.462 0.00 0.00 32.70 2.12
795 8430 7.559590 AATTCAACTACAGATAAGGATGTGC 57.440 36.000 0.00 0.00 29.24 4.57
798 8433 7.420800 GCCAAATTCAACTACAGATAAGGATG 58.579 38.462 0.00 0.00 0.00 3.51
808 8443 2.432444 CTCGGGCCAAATTCAACTACA 58.568 47.619 4.39 0.00 0.00 2.74
822 8457 0.449388 CACTGATTCAAAGCTCGGGC 59.551 55.000 0.00 0.00 39.06 6.13
825 8460 3.745975 TGTAACCACTGATTCAAAGCTCG 59.254 43.478 0.00 0.00 0.00 5.03
826 8461 5.886960 ATGTAACCACTGATTCAAAGCTC 57.113 39.130 0.00 0.00 0.00 4.09
841 8490 6.825213 ACCGAGGGAATACTTTAAATGTAACC 59.175 38.462 0.00 3.16 0.00 2.85
842 8491 7.854557 ACCGAGGGAATACTTTAAATGTAAC 57.145 36.000 0.00 0.00 0.00 2.50
846 8495 6.753107 ACAACCGAGGGAATACTTTAAATG 57.247 37.500 0.00 0.00 0.00 2.32
850 8499 8.156165 TCTTTAAACAACCGAGGGAATACTTTA 58.844 33.333 0.00 0.00 0.00 1.85
851 8500 6.999871 TCTTTAAACAACCGAGGGAATACTTT 59.000 34.615 0.00 0.00 0.00 2.66
852 8501 6.536447 TCTTTAAACAACCGAGGGAATACTT 58.464 36.000 0.00 0.00 0.00 2.24
853 8502 6.117975 TCTTTAAACAACCGAGGGAATACT 57.882 37.500 0.00 0.00 0.00 2.12
855 8504 6.713276 TGATCTTTAAACAACCGAGGGAATA 58.287 36.000 0.00 0.00 0.00 1.75
856 8505 5.566469 TGATCTTTAAACAACCGAGGGAAT 58.434 37.500 0.00 0.00 0.00 3.01
857 8506 4.975631 TGATCTTTAAACAACCGAGGGAA 58.024 39.130 0.00 0.00 0.00 3.97
859 8508 3.127030 GCTGATCTTTAAACAACCGAGGG 59.873 47.826 0.00 0.00 0.00 4.30
860 8509 3.751175 TGCTGATCTTTAAACAACCGAGG 59.249 43.478 0.00 0.00 0.00 4.63
861 8510 4.670221 GCTGCTGATCTTTAAACAACCGAG 60.670 45.833 0.00 0.00 0.00 4.63
863 8512 3.492313 GCTGCTGATCTTTAAACAACCG 58.508 45.455 0.00 0.00 0.00 4.44
864 8513 3.255642 TGGCTGCTGATCTTTAAACAACC 59.744 43.478 0.00 0.00 0.00 3.77
866 8515 4.158394 GGATGGCTGCTGATCTTTAAACAA 59.842 41.667 0.00 0.00 0.00 2.83
867 8516 3.696051 GGATGGCTGCTGATCTTTAAACA 59.304 43.478 0.00 0.00 0.00 2.83
868 8517 3.067320 GGGATGGCTGCTGATCTTTAAAC 59.933 47.826 0.00 0.00 0.00 2.01
869 8518 3.290710 GGGATGGCTGCTGATCTTTAAA 58.709 45.455 0.00 0.00 0.00 1.52
870 8519 2.241941 TGGGATGGCTGCTGATCTTTAA 59.758 45.455 0.00 0.00 0.00 1.52
871 8520 1.845791 TGGGATGGCTGCTGATCTTTA 59.154 47.619 0.00 0.00 0.00 1.85
872 8521 0.627451 TGGGATGGCTGCTGATCTTT 59.373 50.000 0.00 0.00 0.00 2.52
873 8522 0.627451 TTGGGATGGCTGCTGATCTT 59.373 50.000 0.00 0.00 0.00 2.40
874 8523 0.183014 CTTGGGATGGCTGCTGATCT 59.817 55.000 0.00 0.00 0.00 2.75
875 8524 0.822532 CCTTGGGATGGCTGCTGATC 60.823 60.000 0.00 1.68 0.00 2.92
876 8525 1.229359 CCTTGGGATGGCTGCTGAT 59.771 57.895 0.00 0.00 0.00 2.90
877 8526 0.913934 TACCTTGGGATGGCTGCTGA 60.914 55.000 0.00 0.00 0.00 4.26
878 8527 0.465097 CTACCTTGGGATGGCTGCTG 60.465 60.000 0.00 0.00 0.00 4.41
891 8540 5.489278 AGTTCTTATTTCCCTCTGCTACCTT 59.511 40.000 0.00 0.00 0.00 3.50
894 8543 5.813157 GTCAGTTCTTATTTCCCTCTGCTAC 59.187 44.000 0.00 0.00 0.00 3.58
918 8567 6.649436 CCACAGCTAATGATGTACATTAACG 58.351 40.000 10.30 0.35 46.51 3.18
922 8571 3.885297 GGCCACAGCTAATGATGTACATT 59.115 43.478 10.30 0.00 41.28 2.71
924 8573 2.505407 AGGCCACAGCTAATGATGTACA 59.495 45.455 5.01 0.00 41.28 2.90
948 8597 5.648092 CAGAAAACCGGATAGAACCAGATTT 59.352 40.000 9.46 0.00 0.00 2.17
963 8612 1.003233 AGGCTAACCTCCAGAAAACCG 59.997 52.381 0.00 0.00 46.34 4.44
999 8649 1.642762 ACCATCTTCTTGGAGGCCATT 59.357 47.619 5.01 0.00 39.25 3.16
1012 8662 3.956199 CCTTGGTTCATATGCACCATCTT 59.044 43.478 25.01 0.00 40.82 2.40
1050 8700 2.871182 TACCAGAGTTGCGAGCATAG 57.129 50.000 0.00 0.00 0.00 2.23
1093 8743 2.373169 TGGACAGTTCTGAGAAGCCAAT 59.627 45.455 6.83 0.00 0.00 3.16
1134 8801 4.149396 TGAACTCGCGCTAAGAAAAACTAC 59.851 41.667 5.56 0.00 0.00 2.73
1143 8810 5.061064 GGTCATATTATGAACTCGCGCTAAG 59.939 44.000 13.42 5.37 43.61 2.18
1146 8818 3.318017 GGTCATATTATGAACTCGCGCT 58.682 45.455 13.42 0.00 43.61 5.92
1191 9112 7.520292 GCATGATTCTTAGCTTCCTCAATTCTC 60.520 40.741 0.00 0.00 0.00 2.87
1196 9117 5.108187 AGCATGATTCTTAGCTTCCTCAA 57.892 39.130 0.00 0.00 32.52 3.02
1467 13275 3.130633 CAGATCGTTGAGGAACACACAA 58.869 45.455 0.00 0.00 31.78 3.33
1485 13293 0.750249 TGAAGTCGTTGTCAGGCAGA 59.250 50.000 0.00 0.00 0.00 4.26
1551 13359 1.663702 GACACCCGTCAAGACCACG 60.664 63.158 0.00 0.00 42.13 4.94
1554 13362 2.737376 GCGACACCCGTCAAGACC 60.737 66.667 0.00 0.00 42.74 3.85
1596 13404 3.603158 TGCACGGAGCTACTAATGAAA 57.397 42.857 0.00 0.00 45.94 2.69
1601 13409 2.496070 ACAAGATGCACGGAGCTACTAA 59.504 45.455 0.00 0.00 45.94 2.24
1660 13468 3.834350 CGAGCAGTGTCACACTCG 58.166 61.111 24.77 24.77 43.43 4.18
1696 13508 9.051679 GTTTTGGTTAAAGAATTGGCAAGTTAT 57.948 29.630 5.96 0.00 0.00 1.89
1712 13524 7.430441 GCTGTCAAGATAAAGGTTTTGGTTAA 58.570 34.615 0.00 0.00 0.00 2.01
1716 13528 4.524328 AGGCTGTCAAGATAAAGGTTTTGG 59.476 41.667 0.00 0.00 0.00 3.28
1732 13544 3.591023 GTTAGAACTTCAGGAGGCTGTC 58.409 50.000 0.00 0.00 0.00 3.51
1737 13549 3.090037 TCCTCGTTAGAACTTCAGGAGG 58.910 50.000 9.90 9.90 40.67 4.30
1781 13593 1.300465 ACGCCTAGCATGCTCATCG 60.300 57.895 26.57 25.14 0.00 3.84
1805 13617 1.428869 CCTCAAGGACCATAGGGAGG 58.571 60.000 0.00 0.00 37.39 4.30
1847 13659 3.609853 CTCCAGGAAATGTCGGAAATCA 58.390 45.455 0.00 0.00 0.00 2.57
1850 13662 1.351017 AGCTCCAGGAAATGTCGGAAA 59.649 47.619 0.00 0.00 0.00 3.13
1854 13666 1.205655 TCTCAGCTCCAGGAAATGTCG 59.794 52.381 0.00 0.00 0.00 4.35
2003 13815 8.547967 AATTCTATGCTAGAAAACTGACGAAA 57.452 30.769 8.92 0.00 46.81 3.46
2035 13848 4.958509 AGGACTCATGTGATCATTAGCAG 58.041 43.478 0.00 0.00 30.83 4.24
2040 13854 6.249911 AGATCAAGGACTCATGTGATCATT 57.750 37.500 18.57 7.56 45.77 2.57
2042 13856 5.396101 GGAAGATCAAGGACTCATGTGATCA 60.396 44.000 18.57 0.00 45.77 2.92
2045 13859 3.118992 CGGAAGATCAAGGACTCATGTGA 60.119 47.826 0.94 0.00 0.00 3.58
2046 13860 3.193263 CGGAAGATCAAGGACTCATGTG 58.807 50.000 0.00 0.00 0.00 3.21
2047 13861 2.834549 ACGGAAGATCAAGGACTCATGT 59.165 45.455 0.00 0.00 0.00 3.21
2050 13864 2.525368 TCACGGAAGATCAAGGACTCA 58.475 47.619 0.00 0.00 0.00 3.41
2051 13865 3.131223 TCATCACGGAAGATCAAGGACTC 59.869 47.826 0.00 0.00 0.00 3.36
2055 13869 4.445453 TCAATCATCACGGAAGATCAAGG 58.555 43.478 0.00 0.00 0.00 3.61
2056 13870 6.368243 CCTATCAATCATCACGGAAGATCAAG 59.632 42.308 0.00 0.00 0.00 3.02
2065 13879 3.475566 ACACCCTATCAATCATCACGG 57.524 47.619 0.00 0.00 0.00 4.94
2075 13889 3.181469 GCCTTGTCGATTACACCCTATCA 60.181 47.826 0.00 0.00 38.00 2.15
2078 13892 1.135527 CGCCTTGTCGATTACACCCTA 59.864 52.381 0.00 0.00 38.00 3.53
2152 13966 3.939042 ACCCTCATCTTGGATGATCTCT 58.061 45.455 10.12 0.00 0.00 3.10
2167 13981 3.500289 CCTTGATGGAAAAGGAACCCTCA 60.500 47.826 0.00 0.00 46.08 3.86
2346 14160 2.032681 GCAAGCTTCCGTCCAGGT 59.967 61.111 0.00 0.00 41.99 4.00
2440 14254 1.027357 AAGCAAAGCAGTCACACCAG 58.973 50.000 0.00 0.00 0.00 4.00
2463 14277 1.883275 CAAATGTGGCGTACCTTTGGA 59.117 47.619 11.75 0.00 39.65 3.53
2517 14333 8.352201 CAAGATCAAAGGAAACTGTTGACATTA 58.648 33.333 0.00 0.00 42.68 1.90
2564 14380 1.175983 TTGCCTTGTAAACCGGCCAG 61.176 55.000 0.00 0.00 43.12 4.85
2608 14481 6.547510 AGAAAGCCCACTCCAATATGTAAATC 59.452 38.462 0.00 0.00 0.00 2.17
2613 14486 4.019174 CAAGAAAGCCCACTCCAATATGT 58.981 43.478 0.00 0.00 0.00 2.29
2636 14509 7.117285 AGAGAAGCAATCACATAGTATGACA 57.883 36.000 17.13 2.94 0.00 3.58
2735 14608 5.620206 TGTACTTGGACAAATGAGTCACAT 58.380 37.500 0.00 0.00 40.29 3.21
2744 14617 4.320202 GCGTGAACATGTACTTGGACAAAT 60.320 41.667 12.86 0.00 31.83 2.32
2771 14644 8.989980 GCGATAACTAAAAGCTAGAATATGGTT 58.010 33.333 0.00 0.00 0.00 3.67
2884 14757 5.046910 AGCATGATTACGGACAAAAACTG 57.953 39.130 0.00 0.00 0.00 3.16
2886 14759 4.156008 AGGAGCATGATTACGGACAAAAAC 59.844 41.667 0.00 0.00 0.00 2.43
2887 14760 4.155826 CAGGAGCATGATTACGGACAAAAA 59.844 41.667 0.00 0.00 0.00 1.94
2896 14769 4.399004 ACAGAGTCAGGAGCATGATTAC 57.601 45.455 0.00 0.00 0.00 1.89
2920 14795 1.137086 AGCGTAGTAGTTGGGCTGATG 59.863 52.381 0.00 0.00 31.74 3.07
2931 14806 6.497939 CTATGCAAAACTGTAGCGTAGTAG 57.502 41.667 15.30 4.97 40.96 2.57
2935 14810 4.811908 TCACTATGCAAAACTGTAGCGTA 58.188 39.130 0.00 0.00 0.00 4.42
2936 14811 3.659786 TCACTATGCAAAACTGTAGCGT 58.340 40.909 0.00 0.00 0.00 5.07
2937 14812 4.329801 TGATCACTATGCAAAACTGTAGCG 59.670 41.667 0.00 0.00 0.00 4.26
2938 14813 5.220739 CCTGATCACTATGCAAAACTGTAGC 60.221 44.000 0.00 0.00 0.00 3.58
2939 14814 5.295292 CCCTGATCACTATGCAAAACTGTAG 59.705 44.000 0.00 0.00 0.00 2.74
2940 14815 5.185454 CCCTGATCACTATGCAAAACTGTA 58.815 41.667 0.00 0.00 0.00 2.74
2941 14816 4.012374 CCCTGATCACTATGCAAAACTGT 58.988 43.478 0.00 0.00 0.00 3.55
2942 14817 4.012374 ACCCTGATCACTATGCAAAACTG 58.988 43.478 0.00 0.00 0.00 3.16
2943 14818 4.263462 TGACCCTGATCACTATGCAAAACT 60.263 41.667 0.00 0.00 0.00 2.66
2944 14819 4.009675 TGACCCTGATCACTATGCAAAAC 58.990 43.478 0.00 0.00 0.00 2.43
2945 14820 4.264253 CTGACCCTGATCACTATGCAAAA 58.736 43.478 0.00 0.00 0.00 2.44
2946 14821 3.877559 CTGACCCTGATCACTATGCAAA 58.122 45.455 0.00 0.00 0.00 3.68
2947 14822 2.420547 GCTGACCCTGATCACTATGCAA 60.421 50.000 0.00 0.00 0.00 4.08
2948 14823 1.139654 GCTGACCCTGATCACTATGCA 59.860 52.381 0.00 0.00 0.00 3.96
2949 14824 1.871408 CGCTGACCCTGATCACTATGC 60.871 57.143 0.00 0.00 0.00 3.14
2971 14846 3.987404 GAGCATCGCCCAAACAGT 58.013 55.556 0.00 0.00 0.00 3.55
2992 14880 1.078848 GGCATCTGTTCGAGCACCT 60.079 57.895 0.00 0.00 0.00 4.00
2993 14881 1.364626 CTGGCATCTGTTCGAGCACC 61.365 60.000 0.00 0.00 0.00 5.01
2995 14883 0.108472 CTCTGGCATCTGTTCGAGCA 60.108 55.000 0.88 0.88 0.00 4.26
3002 14890 4.042187 AGGTTTTTACTCTCTGGCATCTGT 59.958 41.667 0.00 0.00 0.00 3.41
3003 14891 4.394300 CAGGTTTTTACTCTCTGGCATCTG 59.606 45.833 0.00 0.00 0.00 2.90
3005 14893 4.579869 TCAGGTTTTTACTCTCTGGCATC 58.420 43.478 0.00 0.00 0.00 3.91
3047 14935 0.109132 CCGCCATGGTGAAAGCTTTC 60.109 55.000 28.61 28.61 37.69 2.62
3051 14939 1.434696 CATCCGCCATGGTGAAAGC 59.565 57.895 27.12 2.84 39.52 3.51
3064 14952 1.153086 CTCCCAGCTTTCCCATCCG 60.153 63.158 0.00 0.00 0.00 4.18
3065 14953 1.228510 CCTCCCAGCTTTCCCATCC 59.771 63.158 0.00 0.00 0.00 3.51
3067 14955 0.554792 CATCCTCCCAGCTTTCCCAT 59.445 55.000 0.00 0.00 0.00 4.00
3068 14956 0.549902 TCATCCTCCCAGCTTTCCCA 60.550 55.000 0.00 0.00 0.00 4.37
3069 14957 0.182299 CTCATCCTCCCAGCTTTCCC 59.818 60.000 0.00 0.00 0.00 3.97
3070 14958 1.140652 CTCTCATCCTCCCAGCTTTCC 59.859 57.143 0.00 0.00 0.00 3.13
3071 14959 2.114616 TCTCTCATCCTCCCAGCTTTC 58.885 52.381 0.00 0.00 0.00 2.62
3072 14960 2.238395 GTTCTCTCATCCTCCCAGCTTT 59.762 50.000 0.00 0.00 0.00 3.51
3073 14961 1.836802 GTTCTCTCATCCTCCCAGCTT 59.163 52.381 0.00 0.00 0.00 3.74
3074 14962 1.494960 GTTCTCTCATCCTCCCAGCT 58.505 55.000 0.00 0.00 0.00 4.24
3075 14963 0.467804 GGTTCTCTCATCCTCCCAGC 59.532 60.000 0.00 0.00 0.00 4.85
3076 14964 1.871418 TGGTTCTCTCATCCTCCCAG 58.129 55.000 0.00 0.00 0.00 4.45
3077 14965 2.342406 TTGGTTCTCTCATCCTCCCA 57.658 50.000 0.00 0.00 0.00 4.37
3078 14966 2.092699 CCTTTGGTTCTCTCATCCTCCC 60.093 54.545 0.00 0.00 0.00 4.30
3079 14967 2.840651 TCCTTTGGTTCTCTCATCCTCC 59.159 50.000 0.00 0.00 0.00 4.30
3080 14968 3.118445 CCTCCTTTGGTTCTCTCATCCTC 60.118 52.174 0.00 0.00 0.00 3.71
3081 14969 2.843113 CCTCCTTTGGTTCTCTCATCCT 59.157 50.000 0.00 0.00 0.00 3.24
3082 14970 2.092699 CCCTCCTTTGGTTCTCTCATCC 60.093 54.545 0.00 0.00 0.00 3.51
3083 14971 2.092699 CCCCTCCTTTGGTTCTCTCATC 60.093 54.545 0.00 0.00 0.00 2.92
3084 14972 1.918957 CCCCTCCTTTGGTTCTCTCAT 59.081 52.381 0.00 0.00 0.00 2.90
3085 14973 1.362224 CCCCTCCTTTGGTTCTCTCA 58.638 55.000 0.00 0.00 0.00 3.27
3086 14974 0.621082 CCCCCTCCTTTGGTTCTCTC 59.379 60.000 0.00 0.00 0.00 3.20
3087 14975 0.196118 TCCCCCTCCTTTGGTTCTCT 59.804 55.000 0.00 0.00 0.00 3.10
3088 14976 1.004862 CTTCCCCCTCCTTTGGTTCTC 59.995 57.143 0.00 0.00 0.00 2.87
3089 14977 1.076438 CTTCCCCCTCCTTTGGTTCT 58.924 55.000 0.00 0.00 0.00 3.01
3090 14978 1.073098 TCTTCCCCCTCCTTTGGTTC 58.927 55.000 0.00 0.00 0.00 3.62
3091 14979 1.429299 CTTCTTCCCCCTCCTTTGGTT 59.571 52.381 0.00 0.00 0.00 3.67
3092 14980 1.076438 CTTCTTCCCCCTCCTTTGGT 58.924 55.000 0.00 0.00 0.00 3.67
3093 14981 1.076438 ACTTCTTCCCCCTCCTTTGG 58.924 55.000 0.00 0.00 0.00 3.28
3094 14982 1.272147 CCACTTCTTCCCCCTCCTTTG 60.272 57.143 0.00 0.00 0.00 2.77
3095 14983 1.076438 CCACTTCTTCCCCCTCCTTT 58.924 55.000 0.00 0.00 0.00 3.11
3096 14984 0.846870 CCCACTTCTTCCCCCTCCTT 60.847 60.000 0.00 0.00 0.00 3.36
3097 14985 1.229984 CCCACTTCTTCCCCCTCCT 60.230 63.158 0.00 0.00 0.00 3.69
3098 14986 0.253020 TACCCACTTCTTCCCCCTCC 60.253 60.000 0.00 0.00 0.00 4.30
3099 14987 1.490910 CATACCCACTTCTTCCCCCTC 59.509 57.143 0.00 0.00 0.00 4.30
3100 14988 1.596496 CATACCCACTTCTTCCCCCT 58.404 55.000 0.00 0.00 0.00 4.79
3101 14989 0.106669 GCATACCCACTTCTTCCCCC 60.107 60.000 0.00 0.00 0.00 5.40
3102 14990 0.463833 CGCATACCCACTTCTTCCCC 60.464 60.000 0.00 0.00 0.00 4.81
3103 14991 1.095807 GCGCATACCCACTTCTTCCC 61.096 60.000 0.30 0.00 0.00 3.97
3115 15003 2.675844 TGTATCAAACACAGGCGCATAC 59.324 45.455 10.83 5.75 31.43 2.39
3116 15004 2.979240 TGTATCAAACACAGGCGCATA 58.021 42.857 10.83 0.00 31.43 3.14
3117 15005 1.819928 TGTATCAAACACAGGCGCAT 58.180 45.000 10.83 0.00 31.43 4.73
3118 15006 1.598882 TTGTATCAAACACAGGCGCA 58.401 45.000 10.83 0.00 38.00 6.09
3119 15007 2.697431 TTTGTATCAAACACAGGCGC 57.303 45.000 0.00 0.00 38.00 6.53
3120 15008 4.223320 ACTTTTGTATCAAACACAGGCG 57.777 40.909 0.00 0.00 38.00 5.52
3121 15009 6.704819 CAAAACTTTTGTATCAAACACAGGC 58.295 36.000 6.14 0.00 38.00 4.85
3122 15010 6.534793 AGCAAAACTTTTGTATCAAACACAGG 59.465 34.615 14.36 0.00 38.00 4.00
3123 15011 7.275341 TCAGCAAAACTTTTGTATCAAACACAG 59.725 33.333 14.36 0.00 38.00 3.66
3124 15012 7.093354 TCAGCAAAACTTTTGTATCAAACACA 58.907 30.769 14.36 0.00 38.00 3.72
3125 15013 7.518731 TCAGCAAAACTTTTGTATCAAACAC 57.481 32.000 14.36 0.00 38.00 3.32
3126 15014 8.602328 CAATCAGCAAAACTTTTGTATCAAACA 58.398 29.630 14.36 0.00 35.88 2.83
3127 15015 8.816144 TCAATCAGCAAAACTTTTGTATCAAAC 58.184 29.630 14.36 0.00 0.00 2.93
3128 15016 8.939201 TCAATCAGCAAAACTTTTGTATCAAA 57.061 26.923 14.36 0.00 0.00 2.69
3129 15017 8.196771 ACTCAATCAGCAAAACTTTTGTATCAA 58.803 29.630 14.36 0.00 0.00 2.57
3130 15018 7.715657 ACTCAATCAGCAAAACTTTTGTATCA 58.284 30.769 14.36 0.00 0.00 2.15
3131 15019 8.579682 AACTCAATCAGCAAAACTTTTGTATC 57.420 30.769 14.36 0.41 0.00 2.24
3132 15020 8.819974 CAAACTCAATCAGCAAAACTTTTGTAT 58.180 29.630 14.36 5.08 0.00 2.29
3133 15021 8.031864 TCAAACTCAATCAGCAAAACTTTTGTA 58.968 29.630 14.36 3.24 0.00 2.41
3134 15022 6.873076 TCAAACTCAATCAGCAAAACTTTTGT 59.127 30.769 14.36 1.10 0.00 2.83
3135 15023 7.293402 TCAAACTCAATCAGCAAAACTTTTG 57.707 32.000 9.54 9.54 0.00 2.44
3136 15024 9.034544 GTATCAAACTCAATCAGCAAAACTTTT 57.965 29.630 0.00 0.00 0.00 2.27
3137 15025 8.416329 AGTATCAAACTCAATCAGCAAAACTTT 58.584 29.630 0.00 0.00 30.33 2.66
3138 15026 7.864379 CAGTATCAAACTCAATCAGCAAAACTT 59.136 33.333 0.00 0.00 35.76 2.66
3139 15027 7.229306 TCAGTATCAAACTCAATCAGCAAAACT 59.771 33.333 0.00 0.00 35.76 2.66
3140 15028 7.362662 TCAGTATCAAACTCAATCAGCAAAAC 58.637 34.615 0.00 0.00 35.76 2.43
3141 15029 7.509141 TCAGTATCAAACTCAATCAGCAAAA 57.491 32.000 0.00 0.00 35.76 2.44
3142 15030 7.229306 ACTTCAGTATCAAACTCAATCAGCAAA 59.771 33.333 0.00 0.00 35.76 3.68
3143 15031 6.712095 ACTTCAGTATCAAACTCAATCAGCAA 59.288 34.615 0.00 0.00 35.76 3.91
3144 15032 6.233434 ACTTCAGTATCAAACTCAATCAGCA 58.767 36.000 0.00 0.00 35.76 4.41
3145 15033 6.734104 ACTTCAGTATCAAACTCAATCAGC 57.266 37.500 0.00 0.00 35.76 4.26
3146 15034 9.956720 AAAAACTTCAGTATCAAACTCAATCAG 57.043 29.630 0.00 0.00 35.76 2.90
3147 15035 9.950680 GAAAAACTTCAGTATCAAACTCAATCA 57.049 29.630 0.00 0.00 35.76 2.57
3149 15037 9.956720 CAGAAAAACTTCAGTATCAAACTCAAT 57.043 29.630 0.00 0.00 35.76 2.57
3150 15038 9.173021 TCAGAAAAACTTCAGTATCAAACTCAA 57.827 29.630 0.00 0.00 35.76 3.02
3151 15039 8.731275 TCAGAAAAACTTCAGTATCAAACTCA 57.269 30.769 0.00 0.00 35.76 3.41
3152 15040 8.831550 ACTCAGAAAAACTTCAGTATCAAACTC 58.168 33.333 0.00 0.00 35.76 3.01
3153 15041 8.738645 ACTCAGAAAAACTTCAGTATCAAACT 57.261 30.769 0.00 0.00 39.81 2.66
3159 15047 8.870879 GCGTAATACTCAGAAAAACTTCAGTAT 58.129 33.333 0.00 0.00 0.00 2.12
3160 15048 7.868922 TGCGTAATACTCAGAAAAACTTCAGTA 59.131 33.333 0.00 0.00 0.00 2.74
3161 15049 6.704493 TGCGTAATACTCAGAAAAACTTCAGT 59.296 34.615 0.00 0.00 0.00 3.41
3162 15050 7.117241 TGCGTAATACTCAGAAAAACTTCAG 57.883 36.000 0.00 0.00 0.00 3.02
3163 15051 7.349711 GTTGCGTAATACTCAGAAAAACTTCA 58.650 34.615 0.00 0.00 0.00 3.02
3164 15052 6.795593 GGTTGCGTAATACTCAGAAAAACTTC 59.204 38.462 0.00 0.00 0.00 3.01
3165 15053 6.293790 GGGTTGCGTAATACTCAGAAAAACTT 60.294 38.462 0.00 0.00 0.00 2.66
3166 15054 5.180680 GGGTTGCGTAATACTCAGAAAAACT 59.819 40.000 0.00 0.00 0.00 2.66
3167 15055 5.180680 AGGGTTGCGTAATACTCAGAAAAAC 59.819 40.000 0.00 0.00 0.00 2.43
3168 15056 5.310451 AGGGTTGCGTAATACTCAGAAAAA 58.690 37.500 0.00 0.00 0.00 1.94
3169 15057 4.901868 AGGGTTGCGTAATACTCAGAAAA 58.098 39.130 0.00 0.00 0.00 2.29
3170 15058 4.546829 AGGGTTGCGTAATACTCAGAAA 57.453 40.909 0.00 0.00 0.00 2.52
3171 15059 4.222145 AGAAGGGTTGCGTAATACTCAGAA 59.778 41.667 0.00 0.00 0.00 3.02
3172 15060 3.767673 AGAAGGGTTGCGTAATACTCAGA 59.232 43.478 0.00 0.00 0.00 3.27
3173 15061 4.124851 AGAAGGGTTGCGTAATACTCAG 57.875 45.455 0.00 0.00 0.00 3.35
3174 15062 4.222145 AGAAGAAGGGTTGCGTAATACTCA 59.778 41.667 0.00 0.00 0.00 3.41
3175 15063 4.756502 AGAAGAAGGGTTGCGTAATACTC 58.243 43.478 0.00 0.00 0.00 2.59
3176 15064 4.820894 AGAAGAAGGGTTGCGTAATACT 57.179 40.909 0.00 0.00 0.00 2.12
3177 15065 5.874895 AAAGAAGAAGGGTTGCGTAATAC 57.125 39.130 0.00 0.00 0.00 1.89
3178 15066 6.887626 AAAAAGAAGAAGGGTTGCGTAATA 57.112 33.333 0.00 0.00 0.00 0.98
3179 15067 5.784578 AAAAAGAAGAAGGGTTGCGTAAT 57.215 34.783 0.00 0.00 0.00 1.89
3199 15087 1.425831 TCCCCCGGTGATTCTCAAAAA 59.574 47.619 0.00 0.00 0.00 1.94
3200 15088 1.004277 CTCCCCCGGTGATTCTCAAAA 59.996 52.381 0.00 0.00 0.00 2.44
3201 15089 0.618458 CTCCCCCGGTGATTCTCAAA 59.382 55.000 0.00 0.00 0.00 2.69
3202 15090 1.271840 CCTCCCCCGGTGATTCTCAA 61.272 60.000 0.00 0.00 0.00 3.02
3203 15091 1.689233 CCTCCCCCGGTGATTCTCA 60.689 63.158 0.00 0.00 0.00 3.27
3204 15092 0.398098 TACCTCCCCCGGTGATTCTC 60.398 60.000 0.00 0.00 37.93 2.87
3205 15093 0.690077 GTACCTCCCCCGGTGATTCT 60.690 60.000 0.00 0.00 37.93 2.40
3206 15094 0.690077 AGTACCTCCCCCGGTGATTC 60.690 60.000 0.00 0.00 37.93 2.52
3207 15095 0.690077 GAGTACCTCCCCCGGTGATT 60.690 60.000 0.00 0.00 37.93 2.57
3208 15096 1.075450 GAGTACCTCCCCCGGTGAT 60.075 63.158 0.00 0.00 37.93 3.06
3209 15097 2.096707 TTGAGTACCTCCCCCGGTGA 62.097 60.000 0.00 0.00 37.93 4.02
3210 15098 1.196104 TTTGAGTACCTCCCCCGGTG 61.196 60.000 0.00 0.00 37.93 4.94
3211 15099 0.908180 CTTTGAGTACCTCCCCCGGT 60.908 60.000 0.00 0.00 41.10 5.28
3212 15100 0.908180 ACTTTGAGTACCTCCCCCGG 60.908 60.000 0.00 0.00 0.00 5.73
3213 15101 0.249398 CACTTTGAGTACCTCCCCCG 59.751 60.000 0.00 0.00 0.00 5.73
3214 15102 0.618981 CCACTTTGAGTACCTCCCCC 59.381 60.000 0.00 0.00 0.00 5.40
3215 15103 0.035343 GCCACTTTGAGTACCTCCCC 60.035 60.000 0.00 0.00 0.00 4.81
3216 15104 0.035343 GGCCACTTTGAGTACCTCCC 60.035 60.000 0.00 0.00 0.00 4.30
3217 15105 0.690762 TGGCCACTTTGAGTACCTCC 59.309 55.000 0.00 0.00 0.00 4.30
3218 15106 2.789409 ATGGCCACTTTGAGTACCTC 57.211 50.000 8.16 0.00 0.00 3.85
3219 15107 4.526970 CATAATGGCCACTTTGAGTACCT 58.473 43.478 8.16 0.00 0.00 3.08
3220 15108 3.066760 GCATAATGGCCACTTTGAGTACC 59.933 47.826 8.16 0.00 0.00 3.34
3221 15109 4.292977 GCATAATGGCCACTTTGAGTAC 57.707 45.455 8.16 0.00 0.00 2.73
3233 15121 1.141657 TCACTCTCCTGGCATAATGGC 59.858 52.381 0.00 0.00 44.03 4.40
3234 15122 3.558746 GGATCACTCTCCTGGCATAATGG 60.559 52.174 0.00 0.00 32.18 3.16
3235 15123 3.072038 TGGATCACTCTCCTGGCATAATG 59.928 47.826 0.00 0.00 36.20 1.90
3236 15124 3.321039 TGGATCACTCTCCTGGCATAAT 58.679 45.455 0.00 0.00 36.20 1.28
3237 15125 2.702478 CTGGATCACTCTCCTGGCATAA 59.298 50.000 0.00 0.00 36.20 1.90
3238 15126 2.323599 CTGGATCACTCTCCTGGCATA 58.676 52.381 0.00 0.00 36.20 3.14
3239 15127 1.129917 CTGGATCACTCTCCTGGCAT 58.870 55.000 0.00 0.00 36.20 4.40
3240 15128 0.252421 ACTGGATCACTCTCCTGGCA 60.252 55.000 0.00 0.00 38.27 4.92
3241 15129 0.908198 AACTGGATCACTCTCCTGGC 59.092 55.000 0.00 0.00 38.27 4.85
3242 15130 6.463614 CCTTATAAACTGGATCACTCTCCTGG 60.464 46.154 0.00 0.00 38.27 4.45
3243 15131 6.463614 CCCTTATAAACTGGATCACTCTCCTG 60.464 46.154 0.00 0.00 39.46 3.86
3244 15132 5.604650 CCCTTATAAACTGGATCACTCTCCT 59.395 44.000 0.00 0.00 36.20 3.69
3245 15133 5.602978 TCCCTTATAAACTGGATCACTCTCC 59.397 44.000 0.00 0.00 35.74 3.71
3246 15134 6.732896 TCCCTTATAAACTGGATCACTCTC 57.267 41.667 0.00 0.00 0.00 3.20
3247 15135 7.339482 GTTTCCCTTATAAACTGGATCACTCT 58.661 38.462 0.00 0.00 34.66 3.24
3248 15136 6.542735 GGTTTCCCTTATAAACTGGATCACTC 59.457 42.308 0.00 0.00 37.09 3.51
3249 15137 6.424032 GGTTTCCCTTATAAACTGGATCACT 58.576 40.000 0.00 0.00 37.09 3.41
3250 15138 5.296035 CGGTTTCCCTTATAAACTGGATCAC 59.704 44.000 0.00 1.58 38.82 3.06
3251 15139 5.433526 CGGTTTCCCTTATAAACTGGATCA 58.566 41.667 0.00 0.00 38.82 2.92
3256 15144 4.510340 CGATCCGGTTTCCCTTATAAACTG 59.490 45.833 0.00 0.00 41.06 3.16
3257 15145 4.406649 TCGATCCGGTTTCCCTTATAAACT 59.593 41.667 0.00 0.00 37.09 2.66
3258 15146 4.696455 TCGATCCGGTTTCCCTTATAAAC 58.304 43.478 0.00 0.00 36.34 2.01
3259 15147 5.356291 TTCGATCCGGTTTCCCTTATAAA 57.644 39.130 0.00 0.00 0.00 1.40
3260 15148 5.356291 TTTCGATCCGGTTTCCCTTATAA 57.644 39.130 0.00 0.00 0.00 0.98
3261 15149 5.118286 GTTTTCGATCCGGTTTCCCTTATA 58.882 41.667 0.00 0.00 0.00 0.98
3262 15150 3.918294 TTTCGATCCGGTTTCCCTTAT 57.082 42.857 0.00 0.00 0.00 1.73
3263 15151 3.337358 GTTTTCGATCCGGTTTCCCTTA 58.663 45.455 0.00 0.00 0.00 2.69
3264 15152 2.156917 GTTTTCGATCCGGTTTCCCTT 58.843 47.619 0.00 0.00 0.00 3.95
3265 15153 1.612462 GGTTTTCGATCCGGTTTCCCT 60.612 52.381 0.00 0.00 0.00 4.20
3266 15154 0.806868 GGTTTTCGATCCGGTTTCCC 59.193 55.000 0.00 0.00 0.00 3.97
3267 15155 1.817357 AGGTTTTCGATCCGGTTTCC 58.183 50.000 0.00 0.00 0.00 3.13
3268 15156 4.213906 TGTTTAGGTTTTCGATCCGGTTTC 59.786 41.667 0.00 0.00 0.00 2.78
3269 15157 4.136051 TGTTTAGGTTTTCGATCCGGTTT 58.864 39.130 0.00 0.00 0.00 3.27
3270 15158 3.742385 TGTTTAGGTTTTCGATCCGGTT 58.258 40.909 0.00 0.00 0.00 4.44
3271 15159 3.405823 TGTTTAGGTTTTCGATCCGGT 57.594 42.857 0.00 0.00 0.00 5.28
3272 15160 3.749609 ACTTGTTTAGGTTTTCGATCCGG 59.250 43.478 0.00 0.00 0.00 5.14
3273 15161 5.049954 TCAACTTGTTTAGGTTTTCGATCCG 60.050 40.000 0.00 0.00 0.00 4.18
3274 15162 6.140786 GTCAACTTGTTTAGGTTTTCGATCC 58.859 40.000 0.00 0.00 0.00 3.36
3275 15163 6.140786 GGTCAACTTGTTTAGGTTTTCGATC 58.859 40.000 0.00 0.00 0.00 3.69
3276 15164 5.009310 GGGTCAACTTGTTTAGGTTTTCGAT 59.991 40.000 0.00 0.00 0.00 3.59
3277 15165 4.336153 GGGTCAACTTGTTTAGGTTTTCGA 59.664 41.667 0.00 0.00 0.00 3.71
3278 15166 4.603985 GGGTCAACTTGTTTAGGTTTTCG 58.396 43.478 0.00 0.00 0.00 3.46
3279 15167 4.096833 ACGGGTCAACTTGTTTAGGTTTTC 59.903 41.667 0.00 0.00 0.00 2.29
3280 15168 4.018490 ACGGGTCAACTTGTTTAGGTTTT 58.982 39.130 0.00 0.00 0.00 2.43
3281 15169 3.623703 ACGGGTCAACTTGTTTAGGTTT 58.376 40.909 0.00 0.00 0.00 3.27
3282 15170 3.286329 ACGGGTCAACTTGTTTAGGTT 57.714 42.857 0.00 0.00 0.00 3.50
3283 15171 3.286329 AACGGGTCAACTTGTTTAGGT 57.714 42.857 0.00 0.00 0.00 3.08
3284 15172 5.952526 ATAAACGGGTCAACTTGTTTAGG 57.047 39.130 12.48 0.00 39.37 2.69
3285 15173 7.361457 CCCTTATAAACGGGTCAACTTGTTTAG 60.361 40.741 2.21 5.27 39.37 1.85
3286 15174 6.430616 CCCTTATAAACGGGTCAACTTGTTTA 59.569 38.462 2.21 10.58 40.04 2.01
3287 15175 5.242171 CCCTTATAAACGGGTCAACTTGTTT 59.758 40.000 2.21 7.87 38.10 2.83
3288 15176 4.763279 CCCTTATAAACGGGTCAACTTGTT 59.237 41.667 2.21 0.00 35.65 2.83
3289 15177 4.041938 TCCCTTATAAACGGGTCAACTTGT 59.958 41.667 9.12 0.00 41.40 3.16
3290 15178 4.581868 TCCCTTATAAACGGGTCAACTTG 58.418 43.478 9.12 0.00 41.40 3.16
3291 15179 4.914177 TCCCTTATAAACGGGTCAACTT 57.086 40.909 9.12 0.00 41.40 2.66
3292 15180 4.914177 TTCCCTTATAAACGGGTCAACT 57.086 40.909 9.12 0.00 41.40 3.16
3293 15181 4.156556 GGTTTCCCTTATAAACGGGTCAAC 59.843 45.833 9.12 11.76 41.40 3.18
3294 15182 4.334552 GGTTTCCCTTATAAACGGGTCAA 58.665 43.478 9.12 2.70 41.40 3.18
3295 15183 3.619487 CGGTTTCCCTTATAAACGGGTCA 60.619 47.826 9.12 0.00 41.40 4.02
3296 15184 2.938451 CGGTTTCCCTTATAAACGGGTC 59.062 50.000 9.12 3.17 41.40 4.46
3297 15185 2.356022 CCGGTTTCCCTTATAAACGGGT 60.356 50.000 13.91 0.00 45.28 5.28
3298 15186 2.291365 CCGGTTTCCCTTATAAACGGG 58.709 52.381 9.84 9.84 45.16 5.28
3299 15187 2.291365 CCCGGTTTCCCTTATAAACGG 58.709 52.381 0.00 4.42 37.64 4.44
3300 15188 1.672363 GCCCGGTTTCCCTTATAAACG 59.328 52.381 0.00 0.00 37.64 3.60
3301 15189 2.026641 GGCCCGGTTTCCCTTATAAAC 58.973 52.381 0.00 0.00 36.34 2.01
3302 15190 1.408544 CGGCCCGGTTTCCCTTATAAA 60.409 52.381 0.00 0.00 0.00 1.40
3303 15191 0.180878 CGGCCCGGTTTCCCTTATAA 59.819 55.000 0.00 0.00 0.00 0.98
3304 15192 0.690411 TCGGCCCGGTTTCCCTTATA 60.690 55.000 1.90 0.00 0.00 0.98
3305 15193 1.564483 TTCGGCCCGGTTTCCCTTAT 61.564 55.000 1.90 0.00 0.00 1.73
3306 15194 1.776975 TTTCGGCCCGGTTTCCCTTA 61.777 55.000 1.90 0.00 0.00 2.69
3307 15195 2.643788 TTTTCGGCCCGGTTTCCCTT 62.644 55.000 1.90 0.00 0.00 3.95
3308 15196 3.136043 TTTTCGGCCCGGTTTCCCT 62.136 57.895 1.90 0.00 0.00 4.20
3309 15197 2.598099 TTTTCGGCCCGGTTTCCC 60.598 61.111 1.90 0.00 0.00 3.97
3310 15198 2.646719 GTTTTCGGCCCGGTTTCC 59.353 61.111 1.90 0.00 0.00 3.13
3311 15199 2.646719 GGTTTTCGGCCCGGTTTC 59.353 61.111 1.90 0.00 0.00 2.78
3312 15200 3.289062 CGGTTTTCGGCCCGGTTT 61.289 61.111 1.90 0.00 40.54 3.27
3317 15205 1.165284 TGTTGTACGGTTTTCGGCCC 61.165 55.000 0.00 0.00 44.45 5.80
3318 15206 0.662085 TTGTTGTACGGTTTTCGGCC 59.338 50.000 0.00 0.00 44.45 6.13
3319 15207 1.334329 CCTTGTTGTACGGTTTTCGGC 60.334 52.381 0.00 0.00 44.45 5.54
3320 15208 1.941975 ACCTTGTTGTACGGTTTTCGG 59.058 47.619 0.00 0.00 44.45 4.30
3321 15209 3.678915 AACCTTGTTGTACGGTTTTCG 57.321 42.857 0.00 0.00 37.76 3.46
3322 15210 5.482686 TGTAACCTTGTTGTACGGTTTTC 57.517 39.130 7.33 3.61 41.09 2.29
3323 15211 5.163632 CCTTGTAACCTTGTTGTACGGTTTT 60.164 40.000 7.33 0.00 41.09 2.43
3324 15212 4.336153 CCTTGTAACCTTGTTGTACGGTTT 59.664 41.667 7.33 0.00 41.09 3.27
3325 15213 3.878699 CCTTGTAACCTTGTTGTACGGTT 59.121 43.478 7.21 7.21 43.10 4.44
3326 15214 3.134442 TCCTTGTAACCTTGTTGTACGGT 59.866 43.478 0.00 0.00 0.00 4.83
3327 15215 3.731089 TCCTTGTAACCTTGTTGTACGG 58.269 45.455 0.00 0.00 0.00 4.02
3328 15216 4.624015 TCTCCTTGTAACCTTGTTGTACG 58.376 43.478 0.00 0.00 0.00 3.67
3329 15217 6.285990 TCTTCTCCTTGTAACCTTGTTGTAC 58.714 40.000 0.00 0.00 0.00 2.90
3330 15218 6.325545 TCTCTTCTCCTTGTAACCTTGTTGTA 59.674 38.462 0.00 0.00 0.00 2.41
3331 15219 5.130477 TCTCTTCTCCTTGTAACCTTGTTGT 59.870 40.000 0.00 0.00 0.00 3.32
3332 15220 5.611374 TCTCTTCTCCTTGTAACCTTGTTG 58.389 41.667 0.00 0.00 0.00 3.33
3333 15221 5.888982 TCTCTTCTCCTTGTAACCTTGTT 57.111 39.130 0.00 0.00 0.00 2.83
3334 15222 5.602978 TCTTCTCTTCTCCTTGTAACCTTGT 59.397 40.000 0.00 0.00 0.00 3.16
3335 15223 6.102897 TCTTCTCTTCTCCTTGTAACCTTG 57.897 41.667 0.00 0.00 0.00 3.61
3336 15224 6.099845 TGTTCTTCTCTTCTCCTTGTAACCTT 59.900 38.462 0.00 0.00 0.00 3.50
3337 15225 5.602978 TGTTCTTCTCTTCTCCTTGTAACCT 59.397 40.000 0.00 0.00 0.00 3.50
3338 15226 5.855045 TGTTCTTCTCTTCTCCTTGTAACC 58.145 41.667 0.00 0.00 0.00 2.85
3339 15227 7.170151 GTCTTGTTCTTCTCTTCTCCTTGTAAC 59.830 40.741 0.00 0.00 0.00 2.50
3340 15228 7.147724 TGTCTTGTTCTTCTCTTCTCCTTGTAA 60.148 37.037 0.00 0.00 0.00 2.41
3341 15229 6.323996 TGTCTTGTTCTTCTCTTCTCCTTGTA 59.676 38.462 0.00 0.00 0.00 2.41
3342 15230 5.129485 TGTCTTGTTCTTCTCTTCTCCTTGT 59.871 40.000 0.00 0.00 0.00 3.16
3343 15231 5.465056 GTGTCTTGTTCTTCTCTTCTCCTTG 59.535 44.000 0.00 0.00 0.00 3.61
3344 15232 5.454045 GGTGTCTTGTTCTTCTCTTCTCCTT 60.454 44.000 0.00 0.00 0.00 3.36
3345 15233 4.039852 GGTGTCTTGTTCTTCTCTTCTCCT 59.960 45.833 0.00 0.00 0.00 3.69
3346 15234 4.311606 GGTGTCTTGTTCTTCTCTTCTCC 58.688 47.826 0.00 0.00 0.00 3.71
3347 15235 4.202264 TGGGTGTCTTGTTCTTCTCTTCTC 60.202 45.833 0.00 0.00 0.00 2.87
3348 15236 3.711704 TGGGTGTCTTGTTCTTCTCTTCT 59.288 43.478 0.00 0.00 0.00 2.85
3349 15237 4.073293 TGGGTGTCTTGTTCTTCTCTTC 57.927 45.455 0.00 0.00 0.00 2.87
3350 15238 4.200092 GTTGGGTGTCTTGTTCTTCTCTT 58.800 43.478 0.00 0.00 0.00 2.85
3351 15239 3.199946 TGTTGGGTGTCTTGTTCTTCTCT 59.800 43.478 0.00 0.00 0.00 3.10
3352 15240 3.541632 TGTTGGGTGTCTTGTTCTTCTC 58.458 45.455 0.00 0.00 0.00 2.87
3353 15241 3.644966 TGTTGGGTGTCTTGTTCTTCT 57.355 42.857 0.00 0.00 0.00 2.85
3354 15242 3.066760 CCTTGTTGGGTGTCTTGTTCTTC 59.933 47.826 0.00 0.00 0.00 2.87
3355 15243 3.023832 CCTTGTTGGGTGTCTTGTTCTT 58.976 45.455 0.00 0.00 0.00 2.52
3356 15244 2.654863 CCTTGTTGGGTGTCTTGTTCT 58.345 47.619 0.00 0.00 0.00 3.01
3368 15256 2.536997 CTAGGTCCCGCCCTTGTTGG 62.537 65.000 0.00 0.00 38.26 3.77
3369 15257 1.078426 CTAGGTCCCGCCCTTGTTG 60.078 63.158 0.00 0.00 38.26 3.33
3370 15258 2.967946 GCTAGGTCCCGCCCTTGTT 61.968 63.158 0.00 0.00 38.26 2.83
3371 15259 2.525284 TAGCTAGGTCCCGCCCTTGT 62.525 60.000 0.00 0.00 38.26 3.16
3372 15260 1.749334 CTAGCTAGGTCCCGCCCTTG 61.749 65.000 13.32 0.00 38.26 3.61
3373 15261 1.457831 CTAGCTAGGTCCCGCCCTT 60.458 63.158 13.32 0.00 38.26 3.95
3374 15262 2.198980 CTAGCTAGGTCCCGCCCT 59.801 66.667 13.32 0.00 38.26 5.19
3375 15263 3.617735 GCTAGCTAGGTCCCGCCC 61.618 72.222 22.10 0.00 38.26 6.13
3376 15264 2.838225 TGCTAGCTAGGTCCCGCC 60.838 66.667 22.10 4.24 37.58 6.13
3377 15265 1.828660 TCTGCTAGCTAGGTCCCGC 60.829 63.158 22.10 8.11 0.00 6.13
3378 15266 0.466555 AGTCTGCTAGCTAGGTCCCG 60.467 60.000 22.10 2.73 0.00 5.14
3379 15267 2.660670 TAGTCTGCTAGCTAGGTCCC 57.339 55.000 22.10 6.04 0.00 4.46
3380 15268 4.202172 CCTTTTAGTCTGCTAGCTAGGTCC 60.202 50.000 22.10 6.41 0.00 4.46
3381 15269 4.645588 TCCTTTTAGTCTGCTAGCTAGGTC 59.354 45.833 22.10 7.13 0.00 3.85
3382 15270 4.403113 GTCCTTTTAGTCTGCTAGCTAGGT 59.597 45.833 22.10 0.00 0.00 3.08
3383 15271 4.202172 GGTCCTTTTAGTCTGCTAGCTAGG 60.202 50.000 22.10 6.77 0.00 3.02
3384 15272 4.402793 TGGTCCTTTTAGTCTGCTAGCTAG 59.597 45.833 16.84 16.84 0.00 3.42
3385 15273 4.350245 TGGTCCTTTTAGTCTGCTAGCTA 58.650 43.478 17.23 0.72 0.00 3.32
3386 15274 3.173965 TGGTCCTTTTAGTCTGCTAGCT 58.826 45.455 17.23 0.00 0.00 3.32
3387 15275 3.611766 TGGTCCTTTTAGTCTGCTAGC 57.388 47.619 8.10 8.10 0.00 3.42
3388 15276 5.112686 GTGATGGTCCTTTTAGTCTGCTAG 58.887 45.833 0.00 0.00 0.00 3.42
3389 15277 4.081087 GGTGATGGTCCTTTTAGTCTGCTA 60.081 45.833 0.00 0.00 0.00 3.49
3390 15278 3.307762 GGTGATGGTCCTTTTAGTCTGCT 60.308 47.826 0.00 0.00 0.00 4.24
3391 15279 3.010420 GGTGATGGTCCTTTTAGTCTGC 58.990 50.000 0.00 0.00 0.00 4.26
3392 15280 4.003648 GTGGTGATGGTCCTTTTAGTCTG 58.996 47.826 0.00 0.00 0.00 3.51
3393 15281 3.306780 CGTGGTGATGGTCCTTTTAGTCT 60.307 47.826 0.00 0.00 0.00 3.24
3394 15282 3.000727 CGTGGTGATGGTCCTTTTAGTC 58.999 50.000 0.00 0.00 0.00 2.59
3395 15283 2.635915 TCGTGGTGATGGTCCTTTTAGT 59.364 45.455 0.00 0.00 0.00 2.24
3396 15284 3.328382 TCGTGGTGATGGTCCTTTTAG 57.672 47.619 0.00 0.00 0.00 1.85
3397 15285 3.773418 TTCGTGGTGATGGTCCTTTTA 57.227 42.857 0.00 0.00 0.00 1.52
3398 15286 2.649531 TTCGTGGTGATGGTCCTTTT 57.350 45.000 0.00 0.00 0.00 2.27
3399 15287 2.504367 CTTTCGTGGTGATGGTCCTTT 58.496 47.619 0.00 0.00 0.00 3.11
3400 15288 2.185004 CTTTCGTGGTGATGGTCCTT 57.815 50.000 0.00 0.00 0.00 3.36
3401 15289 3.935993 CTTTCGTGGTGATGGTCCT 57.064 52.632 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.