Multiple sequence alignment - TraesCS3D01G465500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G465500 chr3D 100.000 2768 0 0 1 2768 569467911 569465144 0.000000e+00 5112.0
1 TraesCS3D01G465500 chr3D 87.602 1718 171 28 861 2546 567906257 567907964 0.000000e+00 1954.0
2 TraesCS3D01G465500 chr3D 80.043 1403 214 35 663 2033 569132434 569133802 0.000000e+00 979.0
3 TraesCS3D01G465500 chr3D 81.886 403 44 13 561 946 568181060 568181450 2.070000e-81 313.0
4 TraesCS3D01G465500 chr3D 81.949 277 35 4 664 940 520595057 520595318 1.290000e-53 220.0
5 TraesCS3D01G465500 chr3D 86.275 153 21 0 664 816 566608947 566609099 1.710000e-37 167.0
6 TraesCS3D01G465500 chr3D 83.007 153 14 6 664 816 568017515 568017655 8.050000e-26 128.0
7 TraesCS3D01G465500 chr3D 86.207 116 12 4 190 302 479744758 479744872 3.740000e-24 122.0
8 TraesCS3D01G465500 chrUn 88.536 2015 166 27 566 2544 319041040 319039055 0.000000e+00 2381.0
9 TraesCS3D01G465500 chrUn 88.437 2015 168 27 566 2544 250747455 250749440 0.000000e+00 2370.0
10 TraesCS3D01G465500 chrUn 88.437 2015 168 27 566 2544 258534255 258532270 0.000000e+00 2370.0
11 TraesCS3D01G465500 chrUn 89.058 1901 160 23 663 2544 357987049 357985178 0.000000e+00 2314.0
12 TraesCS3D01G465500 chrUn 88.038 1998 168 23 566 2544 217837239 217839184 0.000000e+00 2300.0
13 TraesCS3D01G465500 chrUn 87.470 1676 143 18 566 2223 227101507 227103133 0.000000e+00 1869.0
14 TraesCS3D01G465500 chrUn 91.002 1278 87 16 962 2213 314515987 314514712 0.000000e+00 1698.0
15 TraesCS3D01G465500 chrUn 92.065 1172 85 6 1381 2546 40931937 40930768 0.000000e+00 1642.0
16 TraesCS3D01G465500 chrUn 87.707 1326 109 15 566 1862 329510149 329511449 0.000000e+00 1496.0
17 TraesCS3D01G465500 chrUn 82.873 543 55 19 400 927 41060058 41059539 1.170000e-123 453.0
18 TraesCS3D01G465500 chrUn 86.087 230 21 3 2546 2767 250749500 250749726 1.280000e-58 237.0
19 TraesCS3D01G465500 chrUn 86.087 230 21 3 2546 2767 258532210 258531984 1.280000e-58 237.0
20 TraesCS3D01G465500 chrUn 84.848 231 22 4 2546 2767 305378401 305378627 1.290000e-53 220.0
21 TraesCS3D01G465500 chrUn 84.416 231 23 4 2546 2767 285856489 285856715 6.000000e-52 215.0
22 TraesCS3D01G465500 chrUn 84.416 231 23 4 2546 2767 298510646 298510420 6.000000e-52 215.0
23 TraesCS3D01G465500 chrUn 83.475 236 22 6 2546 2767 217839244 217839476 1.300000e-48 204.0
24 TraesCS3D01G465500 chrUn 83.475 236 22 6 2546 2767 297984317 297984549 1.300000e-48 204.0
25 TraesCS3D01G465500 chrUn 90.566 159 6 3 757 915 40995719 40995570 4.670000e-48 202.0
26 TraesCS3D01G465500 chr3A 88.099 2025 172 33 557 2546 702415088 702413098 0.000000e+00 2340.0
27 TraesCS3D01G465500 chr3A 80.645 403 49 8 561 946 700423501 700423111 4.510000e-73 285.0
28 TraesCS3D01G465500 chr3A 87.958 191 10 2 2581 2766 702412991 702412809 2.160000e-51 213.0
29 TraesCS3D01G465500 chr3A 84.821 112 16 1 193 303 728228774 728228663 8.100000e-21 111.0
30 TraesCS3D01G465500 chr3B 91.655 1450 110 9 1102 2544 756376898 756375453 0.000000e+00 1997.0
31 TraesCS3D01G465500 chr3B 80.530 755 75 28 395 1111 756379717 756378997 5.290000e-142 514.0
32 TraesCS3D01G465500 chr3B 85.714 231 21 4 2546 2767 756375393 756375166 1.660000e-57 233.0
33 TraesCS3D01G465500 chr3B 89.552 67 7 0 237 303 592646577 592646511 4.910000e-13 86.1
34 TraesCS3D01G465500 chr3B 88.406 69 8 0 234 302 521687733 521687801 1.770000e-12 84.2
35 TraesCS3D01G465500 chr3B 97.436 39 1 0 358 396 740890284 740890246 1.780000e-07 67.6
36 TraesCS3D01G465500 chr5D 91.304 138 10 1 158 295 463921909 463921774 1.310000e-43 187.0
37 TraesCS3D01G465500 chr5D 89.655 145 14 1 161 304 335792401 335792545 1.690000e-42 183.0
38 TraesCS3D01G465500 chr4B 86.179 123 12 5 187 306 580343609 580343729 8.050000e-26 128.0
39 TraesCS3D01G465500 chr4D 83.929 112 15 3 192 302 145593017 145592908 1.360000e-18 104.0
40 TraesCS3D01G465500 chr2B 90.909 66 6 0 237 302 539366693 539366628 3.800000e-14 89.8
41 TraesCS3D01G465500 chr7D 93.478 46 3 0 358 403 569401916 569401871 4.950000e-08 69.4
42 TraesCS3D01G465500 chr2A 95.122 41 0 2 357 396 522843304 522843265 2.300000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G465500 chr3D 569465144 569467911 2767 True 5112.000000 5112 100.000000 1 2768 1 chr3D.!!$R1 2767
1 TraesCS3D01G465500 chr3D 567906257 567907964 1707 False 1954.000000 1954 87.602000 861 2546 1 chr3D.!!$F4 1685
2 TraesCS3D01G465500 chr3D 569132434 569133802 1368 False 979.000000 979 80.043000 663 2033 1 chr3D.!!$F7 1370
3 TraesCS3D01G465500 chrUn 319039055 319041040 1985 True 2381.000000 2381 88.536000 566 2544 1 chrUn.!!$R6 1978
4 TraesCS3D01G465500 chrUn 357985178 357987049 1871 True 2314.000000 2314 89.058000 663 2544 1 chrUn.!!$R7 1881
5 TraesCS3D01G465500 chrUn 227101507 227103133 1626 False 1869.000000 1869 87.470000 566 2223 1 chrUn.!!$F1 1657
6 TraesCS3D01G465500 chrUn 314514712 314515987 1275 True 1698.000000 1698 91.002000 962 2213 1 chrUn.!!$R5 1251
7 TraesCS3D01G465500 chrUn 40930768 40931937 1169 True 1642.000000 1642 92.065000 1381 2546 1 chrUn.!!$R1 1165
8 TraesCS3D01G465500 chrUn 329510149 329511449 1300 False 1496.000000 1496 87.707000 566 1862 1 chrUn.!!$F5 1296
9 TraesCS3D01G465500 chrUn 250747455 250749726 2271 False 1303.500000 2370 87.262000 566 2767 2 chrUn.!!$F7 2201
10 TraesCS3D01G465500 chrUn 258531984 258534255 2271 True 1303.500000 2370 87.262000 566 2767 2 chrUn.!!$R8 2201
11 TraesCS3D01G465500 chrUn 217837239 217839476 2237 False 1252.000000 2300 85.756500 566 2767 2 chrUn.!!$F6 2201
12 TraesCS3D01G465500 chrUn 41059539 41060058 519 True 453.000000 453 82.873000 400 927 1 chrUn.!!$R3 527
13 TraesCS3D01G465500 chr3A 702412809 702415088 2279 True 1276.500000 2340 88.028500 557 2766 2 chr3A.!!$R3 2209
14 TraesCS3D01G465500 chr3B 756375166 756379717 4551 True 914.666667 1997 85.966333 395 2767 3 chr3B.!!$R3 2372

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
847 961 0.037697 TACAATCAGAAGTGCGGCGT 60.038 50.0 9.37 0.0 0.0 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2599 4968 1.167851 TAGTGGACCCAAGTCGTACG 58.832 55.0 9.53 9.53 44.54 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.111853 ACGAGCACCACACATATATGG 57.888 47.619 16.96 8.37 42.13 2.74
23 24 2.698274 ACGAGCACCACACATATATGGA 59.302 45.455 16.96 0.00 39.46 3.41
24 25 3.133901 ACGAGCACCACACATATATGGAA 59.866 43.478 16.96 0.00 39.46 3.53
25 26 3.742882 CGAGCACCACACATATATGGAAG 59.257 47.826 16.96 8.73 39.46 3.46
26 27 3.480470 AGCACCACACATATATGGAAGC 58.520 45.455 16.96 11.00 39.46 3.86
27 28 3.117926 AGCACCACACATATATGGAAGCA 60.118 43.478 16.96 0.00 40.53 3.91
28 29 3.631686 GCACCACACATATATGGAAGCAA 59.368 43.478 16.96 0.00 39.46 3.91
29 30 4.498009 GCACCACACATATATGGAAGCAAC 60.498 45.833 16.96 0.00 39.46 4.17
30 31 4.639755 CACCACACATATATGGAAGCAACA 59.360 41.667 16.96 0.00 39.46 3.33
31 32 5.300034 CACCACACATATATGGAAGCAACAT 59.700 40.000 16.96 0.00 39.46 2.71
32 33 6.486320 CACCACACATATATGGAAGCAACATA 59.514 38.462 16.96 0.00 39.46 2.29
33 34 7.013178 CACCACACATATATGGAAGCAACATAA 59.987 37.037 16.96 0.00 39.46 1.90
34 35 7.559533 ACCACACATATATGGAAGCAACATAAA 59.440 33.333 16.96 0.00 39.46 1.40
35 36 7.862372 CCACACATATATGGAAGCAACATAAAC 59.138 37.037 16.96 0.00 38.34 2.01
36 37 8.404765 CACACATATATGGAAGCAACATAAACA 58.595 33.333 16.96 0.00 34.75 2.83
37 38 8.965819 ACACATATATGGAAGCAACATAAACAA 58.034 29.630 16.96 0.00 34.75 2.83
38 39 9.454585 CACATATATGGAAGCAACATAAACAAG 57.545 33.333 16.96 0.00 34.75 3.16
39 40 8.632679 ACATATATGGAAGCAACATAAACAAGG 58.367 33.333 16.96 0.00 34.75 3.61
40 41 8.849168 CATATATGGAAGCAACATAAACAAGGA 58.151 33.333 4.68 0.00 34.75 3.36
41 42 7.716799 ATATGGAAGCAACATAAACAAGGAA 57.283 32.000 0.00 0.00 34.75 3.36
42 43 6.610075 ATGGAAGCAACATAAACAAGGAAT 57.390 33.333 0.00 0.00 0.00 3.01
43 44 6.418057 TGGAAGCAACATAAACAAGGAATT 57.582 33.333 0.00 0.00 0.00 2.17
44 45 6.825610 TGGAAGCAACATAAACAAGGAATTT 58.174 32.000 0.00 0.00 0.00 1.82
45 46 7.278875 TGGAAGCAACATAAACAAGGAATTTT 58.721 30.769 0.00 0.00 0.00 1.82
46 47 7.772757 TGGAAGCAACATAAACAAGGAATTTTT 59.227 29.630 0.00 0.00 0.00 1.94
67 68 1.859302 TTGGAAACTGCCAAGGTTGT 58.141 45.000 0.00 0.00 42.75 3.32
68 69 1.859302 TGGAAACTGCCAAGGTTGTT 58.141 45.000 0.00 0.00 31.79 2.83
69 70 3.019799 TGGAAACTGCCAAGGTTGTTA 57.980 42.857 0.00 0.00 31.79 2.41
70 71 3.571590 TGGAAACTGCCAAGGTTGTTAT 58.428 40.909 0.00 0.00 31.79 1.89
71 72 3.320541 TGGAAACTGCCAAGGTTGTTATG 59.679 43.478 0.00 0.00 31.79 1.90
72 73 3.572255 GGAAACTGCCAAGGTTGTTATGA 59.428 43.478 0.00 0.00 31.79 2.15
73 74 4.038642 GGAAACTGCCAAGGTTGTTATGAA 59.961 41.667 0.00 0.00 31.79 2.57
74 75 4.853924 AACTGCCAAGGTTGTTATGAAG 57.146 40.909 0.00 0.00 0.00 3.02
75 76 3.832527 ACTGCCAAGGTTGTTATGAAGT 58.167 40.909 0.00 0.00 0.00 3.01
76 77 4.215109 ACTGCCAAGGTTGTTATGAAGTT 58.785 39.130 0.00 0.00 0.00 2.66
77 78 5.381757 ACTGCCAAGGTTGTTATGAAGTTA 58.618 37.500 0.00 0.00 0.00 2.24
78 79 6.010219 ACTGCCAAGGTTGTTATGAAGTTAT 58.990 36.000 0.00 0.00 0.00 1.89
79 80 6.493458 ACTGCCAAGGTTGTTATGAAGTTATT 59.507 34.615 0.00 0.00 0.00 1.40
80 81 7.668052 ACTGCCAAGGTTGTTATGAAGTTATTA 59.332 33.333 0.00 0.00 0.00 0.98
81 82 8.588290 TGCCAAGGTTGTTATGAAGTTATTAT 57.412 30.769 0.00 0.00 0.00 1.28
82 83 8.465999 TGCCAAGGTTGTTATGAAGTTATTATG 58.534 33.333 0.00 0.00 0.00 1.90
83 84 7.435192 GCCAAGGTTGTTATGAAGTTATTATGC 59.565 37.037 0.00 0.00 0.00 3.14
84 85 7.643764 CCAAGGTTGTTATGAAGTTATTATGCG 59.356 37.037 0.00 0.00 0.00 4.73
85 86 7.859325 AGGTTGTTATGAAGTTATTATGCGT 57.141 32.000 0.00 0.00 0.00 5.24
86 87 7.693952 AGGTTGTTATGAAGTTATTATGCGTG 58.306 34.615 0.00 0.00 0.00 5.34
87 88 7.551262 AGGTTGTTATGAAGTTATTATGCGTGA 59.449 33.333 0.00 0.00 0.00 4.35
88 89 8.342634 GGTTGTTATGAAGTTATTATGCGTGAT 58.657 33.333 0.00 0.00 0.00 3.06
89 90 9.716507 GTTGTTATGAAGTTATTATGCGTGATT 57.283 29.630 0.00 0.00 0.00 2.57
95 96 8.771920 TGAAGTTATTATGCGTGATTATAGGG 57.228 34.615 0.00 0.00 0.00 3.53
96 97 8.372459 TGAAGTTATTATGCGTGATTATAGGGT 58.628 33.333 0.00 0.00 0.00 4.34
97 98 8.773404 AAGTTATTATGCGTGATTATAGGGTC 57.227 34.615 0.00 0.00 0.00 4.46
98 99 7.328737 AGTTATTATGCGTGATTATAGGGTCC 58.671 38.462 0.00 0.00 0.00 4.46
99 100 7.180408 AGTTATTATGCGTGATTATAGGGTCCT 59.820 37.037 0.00 0.00 0.00 3.85
100 101 3.963428 ATGCGTGATTATAGGGTCCTC 57.037 47.619 0.00 0.00 0.00 3.71
101 102 2.673258 TGCGTGATTATAGGGTCCTCA 58.327 47.619 0.00 0.00 0.00 3.86
102 103 3.239449 TGCGTGATTATAGGGTCCTCAT 58.761 45.455 0.00 0.00 0.00 2.90
103 104 4.412843 TGCGTGATTATAGGGTCCTCATA 58.587 43.478 0.00 0.00 0.00 2.15
104 105 5.023452 TGCGTGATTATAGGGTCCTCATAT 58.977 41.667 0.00 0.00 0.00 1.78
105 106 6.192044 TGCGTGATTATAGGGTCCTCATATA 58.808 40.000 0.00 0.00 0.00 0.86
106 107 6.839134 TGCGTGATTATAGGGTCCTCATATAT 59.161 38.462 0.00 0.00 0.00 0.86
107 108 7.148641 GCGTGATTATAGGGTCCTCATATATG 58.851 42.308 6.36 6.36 0.00 1.78
108 109 7.661968 CGTGATTATAGGGTCCTCATATATGG 58.338 42.308 12.78 3.87 0.00 2.74
109 110 7.505923 CGTGATTATAGGGTCCTCATATATGGA 59.494 40.741 12.78 0.23 0.00 3.41
110 111 9.213777 GTGATTATAGGGTCCTCATATATGGAA 57.786 37.037 12.78 0.00 33.72 3.53
111 112 9.439461 TGATTATAGGGTCCTCATATATGGAAG 57.561 37.037 12.78 3.88 33.72 3.46
112 113 7.676683 TTATAGGGTCCTCATATATGGAAGC 57.323 40.000 12.78 7.91 33.72 3.86
113 114 4.153371 AGGGTCCTCATATATGGAAGCT 57.847 45.455 12.78 0.00 33.72 3.74
114 115 5.291100 AGGGTCCTCATATATGGAAGCTA 57.709 43.478 12.78 0.00 33.72 3.32
115 116 5.026790 AGGGTCCTCATATATGGAAGCTAC 58.973 45.833 12.78 5.16 33.72 3.58
116 117 4.777896 GGGTCCTCATATATGGAAGCTACA 59.222 45.833 12.78 0.00 33.72 2.74
117 118 5.426833 GGGTCCTCATATATGGAAGCTACAT 59.573 44.000 12.78 8.64 33.72 2.29
118 119 6.344500 GGTCCTCATATATGGAAGCTACATG 58.656 44.000 12.78 0.00 33.72 3.21
119 120 5.814705 GTCCTCATATATGGAAGCTACATGC 59.185 44.000 12.78 0.00 43.29 4.06
120 121 5.484998 TCCTCATATATGGAAGCTACATGCA 59.515 40.000 12.78 0.00 45.94 3.96
121 122 6.157471 TCCTCATATATGGAAGCTACATGCAT 59.843 38.462 12.78 0.00 45.94 3.96
122 123 7.345392 TCCTCATATATGGAAGCTACATGCATA 59.655 37.037 12.78 7.22 45.94 3.14
123 124 7.440556 CCTCATATATGGAAGCTACATGCATAC 59.559 40.741 12.78 0.00 45.94 2.39
124 125 7.850193 TCATATATGGAAGCTACATGCATACA 58.150 34.615 12.78 0.00 45.94 2.29
125 126 7.983484 TCATATATGGAAGCTACATGCATACAG 59.017 37.037 12.78 0.02 45.94 2.74
126 127 4.694760 ATGGAAGCTACATGCATACAGA 57.305 40.909 0.00 0.00 45.94 3.41
127 128 4.486125 TGGAAGCTACATGCATACAGAA 57.514 40.909 0.00 0.00 45.94 3.02
128 129 4.842574 TGGAAGCTACATGCATACAGAAA 58.157 39.130 0.00 0.00 45.94 2.52
129 130 4.877823 TGGAAGCTACATGCATACAGAAAG 59.122 41.667 0.00 0.00 45.94 2.62
130 131 4.878397 GGAAGCTACATGCATACAGAAAGT 59.122 41.667 0.00 0.00 45.94 2.66
131 132 5.355350 GGAAGCTACATGCATACAGAAAGTT 59.645 40.000 0.00 0.00 45.94 2.66
132 133 6.127897 GGAAGCTACATGCATACAGAAAGTTT 60.128 38.462 0.00 0.00 45.94 2.66
133 134 6.187125 AGCTACATGCATACAGAAAGTTTG 57.813 37.500 0.00 0.00 45.94 2.93
134 135 5.707298 AGCTACATGCATACAGAAAGTTTGT 59.293 36.000 0.00 0.00 45.94 2.83
135 136 6.207417 AGCTACATGCATACAGAAAGTTTGTT 59.793 34.615 0.00 0.00 45.94 2.83
136 137 6.863126 GCTACATGCATACAGAAAGTTTGTTT 59.137 34.615 0.00 0.00 42.31 2.83
137 138 7.382218 GCTACATGCATACAGAAAGTTTGTTTT 59.618 33.333 0.00 0.00 42.31 2.43
138 139 9.891828 CTACATGCATACAGAAAGTTTGTTTTA 57.108 29.630 0.00 0.00 32.52 1.52
140 141 9.593134 ACATGCATACAGAAAGTTTGTTTTAAA 57.407 25.926 0.00 0.00 32.52 1.52
143 144 9.646427 TGCATACAGAAAGTTTGTTTTAAAAGT 57.354 25.926 0.00 0.00 32.52 2.66
155 156 9.753669 GTTTGTTTTAAAAGTTGATGAAAGTGG 57.246 29.630 0.00 0.00 0.00 4.00
156 157 8.485976 TTGTTTTAAAAGTTGATGAAAGTGGG 57.514 30.769 0.00 0.00 0.00 4.61
157 158 7.616313 TGTTTTAAAAGTTGATGAAAGTGGGT 58.384 30.769 0.00 0.00 0.00 4.51
158 159 7.547370 TGTTTTAAAAGTTGATGAAAGTGGGTG 59.453 33.333 0.00 0.00 0.00 4.61
159 160 3.733443 AAAGTTGATGAAAGTGGGTGC 57.267 42.857 0.00 0.00 0.00 5.01
160 161 2.363306 AGTTGATGAAAGTGGGTGCA 57.637 45.000 0.00 0.00 0.00 4.57
161 162 2.880443 AGTTGATGAAAGTGGGTGCAT 58.120 42.857 0.00 0.00 0.00 3.96
162 163 4.032960 AGTTGATGAAAGTGGGTGCATA 57.967 40.909 0.00 0.00 0.00 3.14
163 164 3.758554 AGTTGATGAAAGTGGGTGCATAC 59.241 43.478 0.00 0.00 0.00 2.39
164 165 3.431673 TGATGAAAGTGGGTGCATACA 57.568 42.857 0.00 0.00 0.00 2.29
165 166 3.346315 TGATGAAAGTGGGTGCATACAG 58.654 45.455 0.00 0.00 0.00 2.74
166 167 3.008923 TGATGAAAGTGGGTGCATACAGA 59.991 43.478 0.00 0.00 0.00 3.41
167 168 3.500448 TGAAAGTGGGTGCATACAGAA 57.500 42.857 0.00 0.00 0.00 3.02
168 169 3.826524 TGAAAGTGGGTGCATACAGAAA 58.173 40.909 0.00 0.00 0.00 2.52
169 170 3.820467 TGAAAGTGGGTGCATACAGAAAG 59.180 43.478 0.00 0.00 0.00 2.62
170 171 3.508845 AAGTGGGTGCATACAGAAAGT 57.491 42.857 0.00 0.00 0.00 2.66
171 172 3.508845 AGTGGGTGCATACAGAAAGTT 57.491 42.857 0.00 0.00 0.00 2.66
172 173 3.832527 AGTGGGTGCATACAGAAAGTTT 58.167 40.909 0.00 0.00 0.00 2.66
173 174 3.569701 AGTGGGTGCATACAGAAAGTTTG 59.430 43.478 0.00 0.00 33.00 2.93
174 175 3.317993 GTGGGTGCATACAGAAAGTTTGT 59.682 43.478 0.00 0.00 32.52 2.83
175 176 3.957497 TGGGTGCATACAGAAAGTTTGTT 59.043 39.130 0.00 0.00 32.52 2.83
176 177 4.404073 TGGGTGCATACAGAAAGTTTGTTT 59.596 37.500 0.00 0.00 32.52 2.83
177 178 5.105146 TGGGTGCATACAGAAAGTTTGTTTT 60.105 36.000 0.00 0.00 32.52 2.43
178 179 6.096987 TGGGTGCATACAGAAAGTTTGTTTTA 59.903 34.615 0.00 0.00 32.52 1.52
179 180 6.981559 GGGTGCATACAGAAAGTTTGTTTTAA 59.018 34.615 0.00 0.00 32.52 1.52
180 181 7.492994 GGGTGCATACAGAAAGTTTGTTTTAAA 59.507 33.333 0.00 0.00 32.52 1.52
181 182 8.874816 GGTGCATACAGAAAGTTTGTTTTAAAA 58.125 29.630 0.00 0.00 32.52 1.52
195 196 9.767684 GTTTGTTTTAAAAATTGAGGAAAGTGG 57.232 29.630 1.31 0.00 0.00 4.00
196 197 8.499403 TTGTTTTAAAAATTGAGGAAAGTGGG 57.501 30.769 1.31 0.00 0.00 4.61
197 198 6.540551 TGTTTTAAAAATTGAGGAAAGTGGGC 59.459 34.615 1.31 0.00 0.00 5.36
198 199 3.385193 AAAAATTGAGGAAAGTGGGCG 57.615 42.857 0.00 0.00 0.00 6.13
199 200 0.603065 AAATTGAGGAAAGTGGGCGC 59.397 50.000 0.00 0.00 0.00 6.53
200 201 0.251341 AATTGAGGAAAGTGGGCGCT 60.251 50.000 7.64 0.00 0.00 5.92
201 202 0.962356 ATTGAGGAAAGTGGGCGCTG 60.962 55.000 7.64 0.00 0.00 5.18
202 203 2.032681 GAGGAAAGTGGGCGCTGT 59.967 61.111 7.64 0.00 0.00 4.40
203 204 1.600916 GAGGAAAGTGGGCGCTGTT 60.601 57.895 7.64 0.00 0.00 3.16
204 205 0.321298 GAGGAAAGTGGGCGCTGTTA 60.321 55.000 7.64 0.00 0.00 2.41
205 206 0.321653 AGGAAAGTGGGCGCTGTTAG 60.322 55.000 7.64 0.00 0.00 2.34
206 207 0.321298 GGAAAGTGGGCGCTGTTAGA 60.321 55.000 7.64 0.00 0.00 2.10
207 208 1.079503 GAAAGTGGGCGCTGTTAGAG 58.920 55.000 7.64 0.00 0.00 2.43
208 209 0.321653 AAAGTGGGCGCTGTTAGAGG 60.322 55.000 7.64 0.00 0.00 3.69
209 210 2.125106 GTGGGCGCTGTTAGAGGG 60.125 66.667 7.64 0.00 37.69 4.30
210 211 2.284331 TGGGCGCTGTTAGAGGGA 60.284 61.111 7.64 0.00 36.74 4.20
211 212 1.689233 TGGGCGCTGTTAGAGGGAT 60.689 57.895 7.64 0.00 36.74 3.85
212 213 1.227674 GGGCGCTGTTAGAGGGATG 60.228 63.158 7.64 0.00 36.74 3.51
213 214 1.889573 GGCGCTGTTAGAGGGATGC 60.890 63.158 7.64 0.00 36.74 3.91
214 215 1.153369 GCGCTGTTAGAGGGATGCA 60.153 57.895 0.00 0.00 36.74 3.96
215 216 0.533755 GCGCTGTTAGAGGGATGCAT 60.534 55.000 0.00 0.00 36.74 3.96
216 217 1.506493 CGCTGTTAGAGGGATGCATC 58.494 55.000 18.81 18.81 36.74 3.91
217 218 1.875576 CGCTGTTAGAGGGATGCATCC 60.876 57.143 33.90 33.90 46.41 3.51
231 232 1.900237 GCATCCAGCGATTCACAAAC 58.100 50.000 0.00 0.00 0.00 2.93
232 233 1.470098 GCATCCAGCGATTCACAAACT 59.530 47.619 0.00 0.00 0.00 2.66
233 234 2.095059 GCATCCAGCGATTCACAAACTT 60.095 45.455 0.00 0.00 0.00 2.66
234 235 3.612479 GCATCCAGCGATTCACAAACTTT 60.612 43.478 0.00 0.00 0.00 2.66
235 236 3.896648 TCCAGCGATTCACAAACTTTC 57.103 42.857 0.00 0.00 0.00 2.62
236 237 3.210227 TCCAGCGATTCACAAACTTTCA 58.790 40.909 0.00 0.00 0.00 2.69
237 238 3.820467 TCCAGCGATTCACAAACTTTCAT 59.180 39.130 0.00 0.00 0.00 2.57
238 239 4.083324 TCCAGCGATTCACAAACTTTCATC 60.083 41.667 0.00 0.00 0.00 2.92
239 240 4.161333 CAGCGATTCACAAACTTTCATCC 58.839 43.478 0.00 0.00 0.00 3.51
240 241 3.820467 AGCGATTCACAAACTTTCATCCA 59.180 39.130 0.00 0.00 0.00 3.41
241 242 4.278170 AGCGATTCACAAACTTTCATCCAA 59.722 37.500 0.00 0.00 0.00 3.53
242 243 4.382754 GCGATTCACAAACTTTCATCCAAC 59.617 41.667 0.00 0.00 0.00 3.77
243 244 4.612614 CGATTCACAAACTTTCATCCAACG 59.387 41.667 0.00 0.00 0.00 4.10
244 245 3.980646 TCACAAACTTTCATCCAACGG 57.019 42.857 0.00 0.00 0.00 4.44
245 246 2.034053 TCACAAACTTTCATCCAACGGC 59.966 45.455 0.00 0.00 0.00 5.68
246 247 1.339929 ACAAACTTTCATCCAACGGCC 59.660 47.619 0.00 0.00 0.00 6.13
247 248 1.339610 CAAACTTTCATCCAACGGCCA 59.660 47.619 2.24 0.00 0.00 5.36
248 249 1.923356 AACTTTCATCCAACGGCCAT 58.077 45.000 2.24 0.00 0.00 4.40
249 250 1.463674 ACTTTCATCCAACGGCCATC 58.536 50.000 2.24 0.00 0.00 3.51
250 251 0.740737 CTTTCATCCAACGGCCATCC 59.259 55.000 2.24 0.00 0.00 3.51
251 252 0.038890 TTTCATCCAACGGCCATCCA 59.961 50.000 2.24 0.00 0.00 3.41
252 253 0.394216 TTCATCCAACGGCCATCCAG 60.394 55.000 2.24 0.00 0.00 3.86
253 254 1.077501 CATCCAACGGCCATCCAGT 60.078 57.895 2.24 0.00 0.00 4.00
254 255 1.077501 ATCCAACGGCCATCCAGTG 60.078 57.895 2.24 0.00 0.00 3.66
262 263 4.919653 CCATCCAGTGGTCTGACG 57.080 61.111 9.54 0.00 43.76 4.35
263 264 1.219124 CCATCCAGTGGTCTGACGG 59.781 63.158 9.54 0.00 43.76 4.79
264 265 1.257750 CCATCCAGTGGTCTGACGGA 61.258 60.000 9.54 3.26 43.76 4.69
265 266 0.608130 CATCCAGTGGTCTGACGGAA 59.392 55.000 9.54 0.00 43.76 4.30
266 267 1.001974 CATCCAGTGGTCTGACGGAAA 59.998 52.381 9.54 0.00 43.76 3.13
267 268 0.679505 TCCAGTGGTCTGACGGAAAG 59.320 55.000 9.54 0.00 43.76 2.62
268 269 0.393077 CCAGTGGTCTGACGGAAAGT 59.607 55.000 0.00 0.00 43.76 2.66
269 270 1.202651 CCAGTGGTCTGACGGAAAGTT 60.203 52.381 0.00 0.00 43.76 2.66
270 271 2.036733 CCAGTGGTCTGACGGAAAGTTA 59.963 50.000 0.00 0.00 43.76 2.24
271 272 3.318017 CAGTGGTCTGACGGAAAGTTAG 58.682 50.000 1.07 0.00 43.76 2.34
272 273 2.299297 AGTGGTCTGACGGAAAGTTAGG 59.701 50.000 1.07 0.00 37.11 2.69
273 274 1.621814 TGGTCTGACGGAAAGTTAGGG 59.378 52.381 1.07 0.00 37.11 3.53
274 275 1.897802 GGTCTGACGGAAAGTTAGGGA 59.102 52.381 1.07 0.00 37.11 4.20
275 276 2.500504 GGTCTGACGGAAAGTTAGGGAT 59.499 50.000 1.07 0.00 37.11 3.85
276 277 3.430513 GGTCTGACGGAAAGTTAGGGATC 60.431 52.174 1.07 0.00 37.11 3.36
277 278 3.194968 GTCTGACGGAAAGTTAGGGATCA 59.805 47.826 0.00 0.00 37.11 2.92
278 279 3.447586 TCTGACGGAAAGTTAGGGATCAG 59.552 47.826 0.00 0.00 37.11 2.90
279 280 3.170717 TGACGGAAAGTTAGGGATCAGT 58.829 45.455 0.00 0.00 0.00 3.41
280 281 4.346730 TGACGGAAAGTTAGGGATCAGTA 58.653 43.478 0.00 0.00 0.00 2.74
281 282 4.401519 TGACGGAAAGTTAGGGATCAGTAG 59.598 45.833 0.00 0.00 0.00 2.57
282 283 4.351127 ACGGAAAGTTAGGGATCAGTAGT 58.649 43.478 0.00 0.00 0.00 2.73
283 284 4.401837 ACGGAAAGTTAGGGATCAGTAGTC 59.598 45.833 0.00 0.00 0.00 2.59
284 285 4.645588 CGGAAAGTTAGGGATCAGTAGTCT 59.354 45.833 0.00 0.00 0.00 3.24
285 286 5.450688 CGGAAAGTTAGGGATCAGTAGTCTG 60.451 48.000 0.00 0.00 42.54 3.51
296 297 4.171878 TCAGTAGTCTGATCCCTAGTGG 57.828 50.000 14.28 0.00 44.58 4.00
297 298 3.528078 TCAGTAGTCTGATCCCTAGTGGT 59.472 47.826 14.28 0.00 44.58 4.16
298 299 4.017407 TCAGTAGTCTGATCCCTAGTGGTT 60.017 45.833 14.28 0.00 44.58 3.67
299 300 4.339814 CAGTAGTCTGATCCCTAGTGGTTC 59.660 50.000 9.52 0.00 43.76 3.62
300 301 2.753247 AGTCTGATCCCTAGTGGTTCC 58.247 52.381 0.00 0.00 32.62 3.62
301 302 1.763545 GTCTGATCCCTAGTGGTTCCC 59.236 57.143 0.00 0.00 32.62 3.97
302 303 1.651770 TCTGATCCCTAGTGGTTCCCT 59.348 52.381 0.00 0.00 32.62 4.20
303 304 2.045885 TCTGATCCCTAGTGGTTCCCTT 59.954 50.000 0.00 0.00 32.62 3.95
304 305 2.846827 CTGATCCCTAGTGGTTCCCTTT 59.153 50.000 0.00 0.00 32.62 3.11
305 306 3.265489 TGATCCCTAGTGGTTCCCTTTT 58.735 45.455 0.00 0.00 32.62 2.27
306 307 3.010138 TGATCCCTAGTGGTTCCCTTTTG 59.990 47.826 0.00 0.00 32.62 2.44
307 308 1.074889 TCCCTAGTGGTTCCCTTTTGC 59.925 52.381 0.00 0.00 34.77 3.68
308 309 1.203001 CCCTAGTGGTTCCCTTTTGCA 60.203 52.381 0.00 0.00 0.00 4.08
309 310 2.557452 CCCTAGTGGTTCCCTTTTGCAT 60.557 50.000 0.00 0.00 0.00 3.96
310 311 3.165071 CCTAGTGGTTCCCTTTTGCATT 58.835 45.455 0.00 0.00 0.00 3.56
311 312 3.578282 CCTAGTGGTTCCCTTTTGCATTT 59.422 43.478 0.00 0.00 0.00 2.32
312 313 3.473923 AGTGGTTCCCTTTTGCATTTG 57.526 42.857 0.00 0.00 0.00 2.32
313 314 2.104622 AGTGGTTCCCTTTTGCATTTGG 59.895 45.455 0.00 0.00 0.00 3.28
314 315 2.103941 GTGGTTCCCTTTTGCATTTGGA 59.896 45.455 0.00 0.00 0.00 3.53
315 316 2.774234 TGGTTCCCTTTTGCATTTGGAA 59.226 40.909 0.00 0.00 32.87 3.53
316 317 3.181456 TGGTTCCCTTTTGCATTTGGAAG 60.181 43.478 7.51 0.00 35.86 3.46
317 318 3.181455 GGTTCCCTTTTGCATTTGGAAGT 60.181 43.478 7.51 0.00 35.86 3.01
318 319 4.450976 GTTCCCTTTTGCATTTGGAAGTT 58.549 39.130 7.51 0.00 35.86 2.66
319 320 4.335400 TCCCTTTTGCATTTGGAAGTTC 57.665 40.909 0.00 0.00 0.00 3.01
320 321 3.059166 CCCTTTTGCATTTGGAAGTTCG 58.941 45.455 0.00 0.00 0.00 3.95
321 322 3.243704 CCCTTTTGCATTTGGAAGTTCGA 60.244 43.478 0.00 0.00 0.00 3.71
322 323 4.559153 CCTTTTGCATTTGGAAGTTCGAT 58.441 39.130 0.00 0.00 0.00 3.59
323 324 5.336372 CCCTTTTGCATTTGGAAGTTCGATA 60.336 40.000 0.00 0.00 0.00 2.92
324 325 6.332630 CCTTTTGCATTTGGAAGTTCGATAT 58.667 36.000 0.00 0.00 0.00 1.63
325 326 6.473455 CCTTTTGCATTTGGAAGTTCGATATC 59.527 38.462 0.00 0.00 0.00 1.63
326 327 5.499139 TTGCATTTGGAAGTTCGATATCC 57.501 39.130 0.00 5.05 0.00 2.59
327 328 4.780815 TGCATTTGGAAGTTCGATATCCT 58.219 39.130 11.51 0.00 34.24 3.24
328 329 5.192927 TGCATTTGGAAGTTCGATATCCTT 58.807 37.500 11.51 0.00 34.24 3.36
329 330 5.296780 TGCATTTGGAAGTTCGATATCCTTC 59.703 40.000 10.23 10.23 34.24 3.46
334 335 4.402056 GAAGTTCGATATCCTTCCACCA 57.598 45.455 8.32 0.00 30.67 4.17
335 336 4.766375 GAAGTTCGATATCCTTCCACCAA 58.234 43.478 8.32 0.00 30.67 3.67
336 337 4.837093 AGTTCGATATCCTTCCACCAAA 57.163 40.909 0.00 0.00 0.00 3.28
337 338 4.514401 AGTTCGATATCCTTCCACCAAAC 58.486 43.478 0.00 0.00 0.00 2.93
338 339 4.019681 AGTTCGATATCCTTCCACCAAACA 60.020 41.667 0.00 0.00 0.00 2.83
339 340 4.771114 TCGATATCCTTCCACCAAACAT 57.229 40.909 0.00 0.00 0.00 2.71
340 341 5.110814 TCGATATCCTTCCACCAAACATT 57.889 39.130 0.00 0.00 0.00 2.71
341 342 5.505780 TCGATATCCTTCCACCAAACATTT 58.494 37.500 0.00 0.00 0.00 2.32
342 343 5.588648 TCGATATCCTTCCACCAAACATTTC 59.411 40.000 0.00 0.00 0.00 2.17
343 344 5.590259 CGATATCCTTCCACCAAACATTTCT 59.410 40.000 0.00 0.00 0.00 2.52
344 345 6.458751 CGATATCCTTCCACCAAACATTTCTG 60.459 42.308 0.00 0.00 0.00 3.02
345 346 3.909732 TCCTTCCACCAAACATTTCTGT 58.090 40.909 0.00 0.00 37.12 3.41
347 348 5.450453 TCCTTCCACCAAACATTTCTGTTA 58.550 37.500 0.00 0.00 44.83 2.41
348 349 5.300792 TCCTTCCACCAAACATTTCTGTTAC 59.699 40.000 0.00 0.00 44.83 2.50
349 350 5.301805 CCTTCCACCAAACATTTCTGTTACT 59.698 40.000 0.00 0.00 44.83 2.24
350 351 6.385649 TTCCACCAAACATTTCTGTTACTC 57.614 37.500 0.00 0.00 44.83 2.59
351 352 4.825085 TCCACCAAACATTTCTGTTACTCC 59.175 41.667 0.00 0.00 44.83 3.85
352 353 4.022329 CCACCAAACATTTCTGTTACTCCC 60.022 45.833 0.00 0.00 44.83 4.30
353 354 4.827284 CACCAAACATTTCTGTTACTCCCT 59.173 41.667 0.00 0.00 44.83 4.20
354 355 5.048713 CACCAAACATTTCTGTTACTCCCTC 60.049 44.000 0.00 0.00 44.83 4.30
355 356 4.459337 CCAAACATTTCTGTTACTCCCTCC 59.541 45.833 0.00 0.00 44.83 4.30
356 357 4.993705 AACATTTCTGTTACTCCCTCCA 57.006 40.909 0.00 0.00 43.77 3.86
357 358 5.520748 AACATTTCTGTTACTCCCTCCAT 57.479 39.130 0.00 0.00 43.77 3.41
358 359 6.636454 AACATTTCTGTTACTCCCTCCATA 57.364 37.500 0.00 0.00 43.77 2.74
359 360 5.990668 ACATTTCTGTTACTCCCTCCATAC 58.009 41.667 0.00 0.00 28.70 2.39
360 361 5.726793 ACATTTCTGTTACTCCCTCCATACT 59.273 40.000 0.00 0.00 28.70 2.12
361 362 6.901300 ACATTTCTGTTACTCCCTCCATACTA 59.099 38.462 0.00 0.00 28.70 1.82
362 363 7.070074 ACATTTCTGTTACTCCCTCCATACTAG 59.930 40.741 0.00 0.00 28.70 2.57
363 364 5.988865 TCTGTTACTCCCTCCATACTAGA 57.011 43.478 0.00 0.00 0.00 2.43
364 365 5.942961 TCTGTTACTCCCTCCATACTAGAG 58.057 45.833 0.00 0.00 0.00 2.43
365 366 4.471548 TGTTACTCCCTCCATACTAGAGC 58.528 47.826 0.00 0.00 0.00 4.09
366 367 4.168283 TGTTACTCCCTCCATACTAGAGCT 59.832 45.833 0.00 0.00 0.00 4.09
367 368 3.237268 ACTCCCTCCATACTAGAGCTG 57.763 52.381 0.00 0.00 0.00 4.24
368 369 1.892474 CTCCCTCCATACTAGAGCTGC 59.108 57.143 0.00 0.00 0.00 5.25
369 370 0.600557 CCCTCCATACTAGAGCTGCG 59.399 60.000 0.00 0.00 0.00 5.18
370 371 0.600557 CCTCCATACTAGAGCTGCGG 59.399 60.000 0.00 0.00 0.00 5.69
371 372 0.038709 CTCCATACTAGAGCTGCGGC 60.039 60.000 10.33 10.33 39.06 6.53
372 373 0.755327 TCCATACTAGAGCTGCGGCA 60.755 55.000 21.93 1.29 41.70 5.69
373 374 0.104855 CCATACTAGAGCTGCGGCAA 59.895 55.000 21.93 3.49 41.70 4.52
374 375 1.270518 CCATACTAGAGCTGCGGCAAT 60.271 52.381 21.93 10.16 41.70 3.56
375 376 2.487934 CATACTAGAGCTGCGGCAATT 58.512 47.619 21.93 6.99 41.70 2.32
376 377 3.554960 CCATACTAGAGCTGCGGCAATTA 60.555 47.826 21.93 7.83 41.70 1.40
377 378 2.691409 ACTAGAGCTGCGGCAATTAA 57.309 45.000 21.93 0.00 41.70 1.40
378 379 3.199880 ACTAGAGCTGCGGCAATTAAT 57.800 42.857 21.93 0.00 41.70 1.40
379 380 3.545703 ACTAGAGCTGCGGCAATTAATT 58.454 40.909 21.93 0.00 41.70 1.40
380 381 3.947834 ACTAGAGCTGCGGCAATTAATTT 59.052 39.130 21.93 0.00 41.70 1.82
381 382 3.155093 AGAGCTGCGGCAATTAATTTG 57.845 42.857 21.93 0.00 41.70 2.32
382 383 2.159198 AGAGCTGCGGCAATTAATTTGG 60.159 45.455 21.93 0.00 41.70 3.28
383 384 1.824230 AGCTGCGGCAATTAATTTGGA 59.176 42.857 21.93 0.00 41.70 3.53
384 385 2.431782 AGCTGCGGCAATTAATTTGGAT 59.568 40.909 21.93 0.00 41.70 3.41
385 386 3.118665 AGCTGCGGCAATTAATTTGGATT 60.119 39.130 21.93 0.00 41.70 3.01
386 387 3.001533 GCTGCGGCAATTAATTTGGATTG 59.998 43.478 14.08 0.00 38.54 2.67
387 388 3.529533 TGCGGCAATTAATTTGGATTGG 58.470 40.909 0.00 0.00 35.75 3.16
388 389 3.196469 TGCGGCAATTAATTTGGATTGGA 59.804 39.130 0.00 0.00 35.75 3.53
389 390 3.803778 GCGGCAATTAATTTGGATTGGAG 59.196 43.478 0.00 0.00 35.75 3.86
390 391 4.370917 CGGCAATTAATTTGGATTGGAGG 58.629 43.478 0.00 0.00 35.75 4.30
391 392 4.707105 GGCAATTAATTTGGATTGGAGGG 58.293 43.478 0.00 0.00 35.75 4.30
392 393 4.408596 GGCAATTAATTTGGATTGGAGGGA 59.591 41.667 0.00 0.00 35.75 4.20
393 394 5.453762 GGCAATTAATTTGGATTGGAGGGAG 60.454 44.000 0.00 0.00 35.75 4.30
394 395 5.129320 GCAATTAATTTGGATTGGAGGGAGT 59.871 40.000 0.00 0.00 35.75 3.85
395 396 6.323739 GCAATTAATTTGGATTGGAGGGAGTA 59.676 38.462 0.00 0.00 35.75 2.59
396 397 7.684428 GCAATTAATTTGGATTGGAGGGAGTAC 60.684 40.741 0.00 0.00 35.75 2.73
397 398 6.652205 TTAATTTGGATTGGAGGGAGTACT 57.348 37.500 0.00 0.00 0.00 2.73
398 399 5.536497 AATTTGGATTGGAGGGAGTACTT 57.464 39.130 0.00 0.00 0.00 2.24
469 471 3.435186 GCCAGCCCGTTTGAGAGC 61.435 66.667 0.00 0.00 0.00 4.09
471 473 1.596934 CCAGCCCGTTTGAGAGCTA 59.403 57.895 0.00 0.00 33.33 3.32
480 482 3.305964 CGTTTGAGAGCTAAGAACACGA 58.694 45.455 0.00 0.00 0.00 4.35
481 483 3.734231 CGTTTGAGAGCTAAGAACACGAA 59.266 43.478 0.00 0.00 0.00 3.85
509 516 1.889573 GCCCAGCTTAGATGCGTCC 60.890 63.158 1.23 0.00 38.13 4.79
510 517 1.592669 CCCAGCTTAGATGCGTCCG 60.593 63.158 1.23 0.00 38.13 4.79
511 518 1.141881 CCAGCTTAGATGCGTCCGT 59.858 57.895 1.23 0.00 38.13 4.69
512 519 0.872021 CCAGCTTAGATGCGTCCGTC 60.872 60.000 1.23 0.00 38.13 4.79
525 532 1.682982 GTCCGTCTGCGTTATATCCG 58.317 55.000 0.00 0.00 36.15 4.18
535 543 1.137513 GTTATATCCGCCAGCACGAC 58.862 55.000 0.00 0.00 34.06 4.34
546 555 1.004440 AGCACGACAAAGAGGGAGC 60.004 57.895 0.00 0.00 0.00 4.70
555 564 2.043227 CAAAGAGGGAGCCCTACCTAG 58.957 57.143 8.34 0.00 46.12 3.02
696 810 2.044352 TCGCCGTCTGGGAGATCA 60.044 61.111 0.00 0.00 39.97 2.92
700 814 1.006805 CCGTCTGGGAGATCATCGC 60.007 63.158 0.00 0.00 41.18 4.58
708 822 3.157217 GAGATCATCGCCCGCCTGT 62.157 63.158 0.00 0.00 0.00 4.00
827 941 2.491022 CCTCCCCCTCTTCTACGCG 61.491 68.421 3.53 3.53 0.00 6.01
845 959 0.370273 CGTACAATCAGAAGTGCGGC 59.630 55.000 8.40 0.00 39.61 6.53
846 960 0.370273 GTACAATCAGAAGTGCGGCG 59.630 55.000 0.51 0.51 0.00 6.46
847 961 0.037697 TACAATCAGAAGTGCGGCGT 60.038 50.000 9.37 0.00 0.00 5.68
848 962 1.291877 ACAATCAGAAGTGCGGCGTC 61.292 55.000 9.37 0.91 0.00 5.19
849 963 2.094659 AATCAGAAGTGCGGCGTCG 61.095 57.895 4.29 4.29 39.81 5.12
850 964 3.989698 ATCAGAAGTGCGGCGTCGG 62.990 63.158 13.05 0.00 36.79 4.79
890 1004 4.065321 GTCACTAGACATCATCCCCTTG 57.935 50.000 0.00 0.00 44.34 3.61
900 1020 1.540367 ATCCCCTTGGACCACCGAA 60.540 57.895 0.00 0.00 45.58 4.30
947 1070 2.888534 TCCGTCGCGCTAATTGGC 60.889 61.111 5.56 3.26 0.00 4.52
988 1111 1.788258 CATCTCGTGCGATGGCTTAT 58.212 50.000 0.15 0.00 40.82 1.73
1003 1126 3.055458 TGGCTTATTCGTCCTCAACATGA 60.055 43.478 0.00 0.00 0.00 3.07
1007 1130 1.014044 TTCGTCCTCAACATGAGCGC 61.014 55.000 0.00 0.00 42.98 5.92
1024 1147 1.375908 GCGGGTCAGTTCAGCATCA 60.376 57.895 0.00 0.00 0.00 3.07
1056 1179 3.108289 CGTCAGTGTGCTCGCCTG 61.108 66.667 0.00 0.00 0.00 4.85
1155 3394 4.102598 CCCATGATCCAGATGACTCCTAT 58.897 47.826 0.00 0.00 0.00 2.57
1225 3470 0.178992 TGGCCTTGTTGTGGAGGAAG 60.179 55.000 3.32 0.00 34.91 3.46
1257 3502 3.070018 CACACTTCTCCTGTTCCATCAC 58.930 50.000 0.00 0.00 0.00 3.06
1317 3562 2.806745 CGACACCACCACTGAGTCATTT 60.807 50.000 0.00 0.00 0.00 2.32
1404 3667 2.133281 TTGAGGTGGATGGAATGCTG 57.867 50.000 0.00 0.00 34.76 4.41
1423 3686 3.433598 GCTGGGCATGTCCTGTCTTAATA 60.434 47.826 22.50 0.00 34.39 0.98
1462 3725 2.104792 GGTATCTGGGCTATGCAGAACA 59.895 50.000 0.00 0.00 0.00 3.18
1512 3775 0.320683 GGGTTGAATTGCCAGTTGCC 60.321 55.000 0.00 0.00 40.16 4.52
1758 4027 4.485163 GTTATGTTGTCAATGCTTCACCC 58.515 43.478 0.00 0.00 0.00 4.61
2049 4329 4.919754 GTCATTTGGATCACTGTTTGAAGC 59.080 41.667 0.00 0.00 37.92 3.86
2156 4446 8.928270 TTAGTACTCAAAGTTAGCAATCTAGC 57.072 34.615 0.00 0.00 0.00 3.42
2321 4615 1.471684 CTGAAGGTGAAATGAGGCAGC 59.528 52.381 0.00 0.00 0.00 5.25
2370 4664 6.024552 TGCACCTGATTTTCATAAAAGGTC 57.975 37.500 0.00 0.00 33.95 3.85
2429 4723 3.632189 ACTTTCAAACGAAATGCTCTGC 58.368 40.909 0.00 0.00 32.10 4.26
2444 4738 2.159544 GCTCTGCTGCAGTTCATTCTTC 60.160 50.000 27.24 5.57 32.61 2.87
2445 4739 2.071540 TCTGCTGCAGTTCATTCTTCG 58.928 47.619 27.24 0.15 32.61 3.79
2484 4779 6.546395 CATCTGGTTAGCTGTTGAAACATAC 58.454 40.000 0.00 0.00 38.41 2.39
2512 4807 3.058708 ACAATTCTGTCTGTGTTGCATCG 60.059 43.478 0.00 0.00 0.00 3.84
2529 4824 7.860373 TGTTGCATCGCTTGGAATTATATTTAC 59.140 33.333 0.00 0.00 38.01 2.01
2570 4923 9.230122 TGAAATGAAACTTCTACTGATATGCAA 57.770 29.630 0.00 0.00 0.00 4.08
2599 4968 1.310933 CCCTGTGACTGGAGCAATGC 61.311 60.000 10.33 0.00 0.00 3.56
2606 4975 0.736325 ACTGGAGCAATGCGTACGAC 60.736 55.000 21.65 11.11 0.00 4.34
2665 5043 6.117975 TGTACTCCCTCCGTTTCTTTTTAT 57.882 37.500 0.00 0.00 0.00 1.40
2668 5046 6.971726 ACTCCCTCCGTTTCTTTTTATTTT 57.028 33.333 0.00 0.00 0.00 1.82
2686 5064 8.682128 TTTATTTTGCATATTTGGTTCGTCTC 57.318 30.769 0.00 0.00 0.00 3.36
2767 5152 7.866729 TCTTGCGTTAGATTTTGTTGAATGTA 58.133 30.769 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.526650 TCCATATATGTGTGGTGCTCGTAT 59.473 41.667 11.73 0.00 37.81 3.06
1 2 3.892588 TCCATATATGTGTGGTGCTCGTA 59.107 43.478 11.73 0.00 37.81 3.43
2 3 2.698274 TCCATATATGTGTGGTGCTCGT 59.302 45.455 11.73 0.00 37.81 4.18
3 4 3.385193 TCCATATATGTGTGGTGCTCG 57.615 47.619 11.73 0.00 37.81 5.03
4 5 3.499918 GCTTCCATATATGTGTGGTGCTC 59.500 47.826 11.73 0.00 37.81 4.26
5 6 3.117926 TGCTTCCATATATGTGTGGTGCT 60.118 43.478 18.92 0.00 37.81 4.40
6 7 3.213506 TGCTTCCATATATGTGTGGTGC 58.786 45.455 11.73 14.51 37.81 5.01
7 8 4.639755 TGTTGCTTCCATATATGTGTGGTG 59.360 41.667 11.73 1.81 37.81 4.17
8 9 4.854173 TGTTGCTTCCATATATGTGTGGT 58.146 39.130 11.73 0.00 37.81 4.16
9 10 7.509141 TTATGTTGCTTCCATATATGTGTGG 57.491 36.000 11.73 0.00 37.92 4.17
10 11 8.404765 TGTTTATGTTGCTTCCATATATGTGTG 58.595 33.333 11.73 2.52 0.00 3.82
11 12 8.518430 TGTTTATGTTGCTTCCATATATGTGT 57.482 30.769 11.73 0.00 0.00 3.72
12 13 9.454585 CTTGTTTATGTTGCTTCCATATATGTG 57.545 33.333 11.73 3.77 0.00 3.21
13 14 8.632679 CCTTGTTTATGTTGCTTCCATATATGT 58.367 33.333 11.73 0.00 0.00 2.29
14 15 8.849168 TCCTTGTTTATGTTGCTTCCATATATG 58.151 33.333 5.68 5.68 0.00 1.78
15 16 8.995027 TCCTTGTTTATGTTGCTTCCATATAT 57.005 30.769 0.00 0.00 0.00 0.86
16 17 8.815565 TTCCTTGTTTATGTTGCTTCCATATA 57.184 30.769 0.00 0.00 0.00 0.86
17 18 7.716799 TTCCTTGTTTATGTTGCTTCCATAT 57.283 32.000 0.00 0.00 0.00 1.78
18 19 7.716799 ATTCCTTGTTTATGTTGCTTCCATA 57.283 32.000 0.00 0.00 0.00 2.74
19 20 6.610075 ATTCCTTGTTTATGTTGCTTCCAT 57.390 33.333 0.00 0.00 0.00 3.41
20 21 6.418057 AATTCCTTGTTTATGTTGCTTCCA 57.582 33.333 0.00 0.00 0.00 3.53
21 22 7.728847 AAAATTCCTTGTTTATGTTGCTTCC 57.271 32.000 0.00 0.00 0.00 3.46
45 46 3.008485 ACAACCTTGGCAGTTTCCAAAAA 59.992 39.130 0.00 0.00 44.73 1.94
46 47 2.569404 ACAACCTTGGCAGTTTCCAAAA 59.431 40.909 0.00 0.00 44.73 2.44
47 48 2.183679 ACAACCTTGGCAGTTTCCAAA 58.816 42.857 0.00 0.00 44.73 3.28
48 49 1.859302 ACAACCTTGGCAGTTTCCAA 58.141 45.000 0.00 0.00 43.36 3.53
49 50 1.859302 AACAACCTTGGCAGTTTCCA 58.141 45.000 0.00 0.00 0.00 3.53
50 51 3.572255 TCATAACAACCTTGGCAGTTTCC 59.428 43.478 3.34 0.00 0.00 3.13
51 52 4.846779 TCATAACAACCTTGGCAGTTTC 57.153 40.909 3.34 0.00 0.00 2.78
52 53 4.649218 ACTTCATAACAACCTTGGCAGTTT 59.351 37.500 3.34 0.00 0.00 2.66
53 54 4.215109 ACTTCATAACAACCTTGGCAGTT 58.785 39.130 0.00 0.00 0.00 3.16
54 55 3.832527 ACTTCATAACAACCTTGGCAGT 58.167 40.909 0.00 0.00 0.00 4.40
55 56 4.853924 AACTTCATAACAACCTTGGCAG 57.146 40.909 0.00 0.00 0.00 4.85
56 57 6.909550 AATAACTTCATAACAACCTTGGCA 57.090 33.333 0.00 0.00 0.00 4.92
57 58 7.435192 GCATAATAACTTCATAACAACCTTGGC 59.565 37.037 0.00 0.00 0.00 4.52
58 59 7.643764 CGCATAATAACTTCATAACAACCTTGG 59.356 37.037 0.00 0.00 0.00 3.61
59 60 8.181573 ACGCATAATAACTTCATAACAACCTTG 58.818 33.333 0.00 0.00 0.00 3.61
60 61 8.181573 CACGCATAATAACTTCATAACAACCTT 58.818 33.333 0.00 0.00 0.00 3.50
61 62 7.551262 TCACGCATAATAACTTCATAACAACCT 59.449 33.333 0.00 0.00 0.00 3.50
62 63 7.690228 TCACGCATAATAACTTCATAACAACC 58.310 34.615 0.00 0.00 0.00 3.77
63 64 9.716507 AATCACGCATAATAACTTCATAACAAC 57.283 29.630 0.00 0.00 0.00 3.32
69 70 9.383519 CCCTATAATCACGCATAATAACTTCAT 57.616 33.333 0.00 0.00 0.00 2.57
70 71 8.372459 ACCCTATAATCACGCATAATAACTTCA 58.628 33.333 0.00 0.00 0.00 3.02
71 72 8.773404 ACCCTATAATCACGCATAATAACTTC 57.227 34.615 0.00 0.00 0.00 3.01
72 73 7.822822 GGACCCTATAATCACGCATAATAACTT 59.177 37.037 0.00 0.00 0.00 2.66
73 74 7.180408 AGGACCCTATAATCACGCATAATAACT 59.820 37.037 0.00 0.00 0.00 2.24
74 75 7.328737 AGGACCCTATAATCACGCATAATAAC 58.671 38.462 0.00 0.00 0.00 1.89
75 76 7.179516 TGAGGACCCTATAATCACGCATAATAA 59.820 37.037 0.00 0.00 0.00 1.40
76 77 6.666113 TGAGGACCCTATAATCACGCATAATA 59.334 38.462 0.00 0.00 0.00 0.98
77 78 5.483937 TGAGGACCCTATAATCACGCATAAT 59.516 40.000 0.00 0.00 0.00 1.28
78 79 4.836175 TGAGGACCCTATAATCACGCATAA 59.164 41.667 0.00 0.00 0.00 1.90
79 80 4.412843 TGAGGACCCTATAATCACGCATA 58.587 43.478 0.00 0.00 0.00 3.14
80 81 3.239449 TGAGGACCCTATAATCACGCAT 58.761 45.455 0.00 0.00 0.00 4.73
81 82 2.673258 TGAGGACCCTATAATCACGCA 58.327 47.619 0.00 0.00 0.00 5.24
82 83 3.963428 ATGAGGACCCTATAATCACGC 57.037 47.619 0.00 0.00 0.00 5.34
83 84 7.505923 TCCATATATGAGGACCCTATAATCACG 59.494 40.741 14.54 0.00 0.00 4.35
84 85 8.783660 TCCATATATGAGGACCCTATAATCAC 57.216 38.462 14.54 0.00 0.00 3.06
85 86 9.439461 CTTCCATATATGAGGACCCTATAATCA 57.561 37.037 14.54 0.00 32.62 2.57
86 87 8.371699 GCTTCCATATATGAGGACCCTATAATC 58.628 40.741 14.54 0.00 32.62 1.75
87 88 8.076881 AGCTTCCATATATGAGGACCCTATAAT 58.923 37.037 14.54 0.00 32.62 1.28
88 89 7.430844 AGCTTCCATATATGAGGACCCTATAA 58.569 38.462 14.54 0.00 32.62 0.98
89 90 6.998112 AGCTTCCATATATGAGGACCCTATA 58.002 40.000 14.54 0.00 32.62 1.31
90 91 5.859429 AGCTTCCATATATGAGGACCCTAT 58.141 41.667 14.54 0.00 32.62 2.57
91 92 5.291100 AGCTTCCATATATGAGGACCCTA 57.709 43.478 14.54 0.00 32.62 3.53
92 93 4.153371 AGCTTCCATATATGAGGACCCT 57.847 45.455 14.54 0.57 32.62 4.34
93 94 4.777896 TGTAGCTTCCATATATGAGGACCC 59.222 45.833 14.54 0.00 32.62 4.46
94 95 6.344500 CATGTAGCTTCCATATATGAGGACC 58.656 44.000 14.54 0.00 32.62 4.46
95 96 5.814705 GCATGTAGCTTCCATATATGAGGAC 59.185 44.000 14.54 4.26 41.15 3.85
96 97 5.484998 TGCATGTAGCTTCCATATATGAGGA 59.515 40.000 14.54 0.81 45.94 3.71
97 98 5.737860 TGCATGTAGCTTCCATATATGAGG 58.262 41.667 14.54 0.00 45.94 3.86
98 99 7.983484 TGTATGCATGTAGCTTCCATATATGAG 59.017 37.037 14.54 5.73 45.94 2.90
99 100 7.850193 TGTATGCATGTAGCTTCCATATATGA 58.150 34.615 14.54 0.00 45.94 2.15
100 101 7.983484 TCTGTATGCATGTAGCTTCCATATATG 59.017 37.037 10.16 5.68 45.94 1.78
101 102 8.082672 TCTGTATGCATGTAGCTTCCATATAT 57.917 34.615 10.16 0.00 45.94 0.86
102 103 7.480760 TCTGTATGCATGTAGCTTCCATATA 57.519 36.000 10.16 0.00 45.94 0.86
103 104 6.364568 TCTGTATGCATGTAGCTTCCATAT 57.635 37.500 10.16 0.00 45.94 1.78
104 105 5.806654 TCTGTATGCATGTAGCTTCCATA 57.193 39.130 10.16 0.00 45.94 2.74
105 106 4.694760 TCTGTATGCATGTAGCTTCCAT 57.305 40.909 10.16 0.00 45.94 3.41
106 107 4.486125 TTCTGTATGCATGTAGCTTCCA 57.514 40.909 10.16 0.00 45.94 3.53
107 108 4.878397 ACTTTCTGTATGCATGTAGCTTCC 59.122 41.667 10.16 0.00 45.94 3.46
108 109 6.428385 AACTTTCTGTATGCATGTAGCTTC 57.572 37.500 10.16 0.00 45.94 3.86
109 110 6.207417 ACAAACTTTCTGTATGCATGTAGCTT 59.793 34.615 10.16 0.00 45.94 3.74
110 111 5.707298 ACAAACTTTCTGTATGCATGTAGCT 59.293 36.000 10.16 0.00 45.94 3.32
111 112 5.942872 ACAAACTTTCTGTATGCATGTAGC 58.057 37.500 10.16 0.00 45.96 3.58
112 113 8.801715 AAAACAAACTTTCTGTATGCATGTAG 57.198 30.769 10.16 7.56 0.00 2.74
114 115 9.593134 TTTAAAACAAACTTTCTGTATGCATGT 57.407 25.926 10.16 0.00 0.00 3.21
117 118 9.646427 ACTTTTAAAACAAACTTTCTGTATGCA 57.354 25.926 0.00 0.00 0.00 3.96
129 130 9.753669 CCACTTTCATCAACTTTTAAAACAAAC 57.246 29.630 0.00 0.00 0.00 2.93
130 131 8.940952 CCCACTTTCATCAACTTTTAAAACAAA 58.059 29.630 0.00 0.00 0.00 2.83
131 132 8.097662 ACCCACTTTCATCAACTTTTAAAACAA 58.902 29.630 0.00 0.00 0.00 2.83
132 133 7.547370 CACCCACTTTCATCAACTTTTAAAACA 59.453 33.333 0.00 0.00 0.00 2.83
133 134 7.465379 GCACCCACTTTCATCAACTTTTAAAAC 60.465 37.037 0.00 0.00 0.00 2.43
134 135 6.536941 GCACCCACTTTCATCAACTTTTAAAA 59.463 34.615 0.00 0.00 0.00 1.52
135 136 6.045955 GCACCCACTTTCATCAACTTTTAAA 58.954 36.000 0.00 0.00 0.00 1.52
136 137 5.127845 TGCACCCACTTTCATCAACTTTTAA 59.872 36.000 0.00 0.00 0.00 1.52
137 138 4.646945 TGCACCCACTTTCATCAACTTTTA 59.353 37.500 0.00 0.00 0.00 1.52
138 139 3.450457 TGCACCCACTTTCATCAACTTTT 59.550 39.130 0.00 0.00 0.00 2.27
139 140 3.030291 TGCACCCACTTTCATCAACTTT 58.970 40.909 0.00 0.00 0.00 2.66
140 141 2.665165 TGCACCCACTTTCATCAACTT 58.335 42.857 0.00 0.00 0.00 2.66
141 142 2.363306 TGCACCCACTTTCATCAACT 57.637 45.000 0.00 0.00 0.00 3.16
142 143 3.505680 TGTATGCACCCACTTTCATCAAC 59.494 43.478 0.00 0.00 0.00 3.18
143 144 3.758023 CTGTATGCACCCACTTTCATCAA 59.242 43.478 0.00 0.00 0.00 2.57
144 145 3.008923 TCTGTATGCACCCACTTTCATCA 59.991 43.478 0.00 0.00 0.00 3.07
145 146 3.609853 TCTGTATGCACCCACTTTCATC 58.390 45.455 0.00 0.00 0.00 2.92
146 147 3.719268 TCTGTATGCACCCACTTTCAT 57.281 42.857 0.00 0.00 0.00 2.57
147 148 3.500448 TTCTGTATGCACCCACTTTCA 57.500 42.857 0.00 0.00 0.00 2.69
148 149 3.821033 ACTTTCTGTATGCACCCACTTTC 59.179 43.478 0.00 0.00 0.00 2.62
149 150 3.832527 ACTTTCTGTATGCACCCACTTT 58.167 40.909 0.00 0.00 0.00 2.66
150 151 3.508845 ACTTTCTGTATGCACCCACTT 57.491 42.857 0.00 0.00 0.00 3.16
151 152 3.508845 AACTTTCTGTATGCACCCACT 57.491 42.857 0.00 0.00 0.00 4.00
152 153 3.317993 ACAAACTTTCTGTATGCACCCAC 59.682 43.478 0.00 0.00 0.00 4.61
153 154 3.561143 ACAAACTTTCTGTATGCACCCA 58.439 40.909 0.00 0.00 0.00 4.51
154 155 4.584327 AACAAACTTTCTGTATGCACCC 57.416 40.909 0.00 0.00 0.00 4.61
155 156 7.995463 TTAAAACAAACTTTCTGTATGCACC 57.005 32.000 0.00 0.00 0.00 5.01
169 170 9.767684 CCACTTTCCTCAATTTTTAAAACAAAC 57.232 29.630 0.00 0.00 0.00 2.93
170 171 8.951243 CCCACTTTCCTCAATTTTTAAAACAAA 58.049 29.630 0.00 0.00 0.00 2.83
171 172 7.066404 GCCCACTTTCCTCAATTTTTAAAACAA 59.934 33.333 0.00 0.00 0.00 2.83
172 173 6.540551 GCCCACTTTCCTCAATTTTTAAAACA 59.459 34.615 0.00 0.00 0.00 2.83
173 174 6.292649 CGCCCACTTTCCTCAATTTTTAAAAC 60.293 38.462 0.00 0.00 0.00 2.43
174 175 5.755861 CGCCCACTTTCCTCAATTTTTAAAA 59.244 36.000 0.00 0.00 0.00 1.52
175 176 5.293560 CGCCCACTTTCCTCAATTTTTAAA 58.706 37.500 0.00 0.00 0.00 1.52
176 177 4.797933 GCGCCCACTTTCCTCAATTTTTAA 60.798 41.667 0.00 0.00 0.00 1.52
177 178 3.305744 GCGCCCACTTTCCTCAATTTTTA 60.306 43.478 0.00 0.00 0.00 1.52
178 179 2.547855 GCGCCCACTTTCCTCAATTTTT 60.548 45.455 0.00 0.00 0.00 1.94
179 180 1.000843 GCGCCCACTTTCCTCAATTTT 59.999 47.619 0.00 0.00 0.00 1.82
180 181 0.603065 GCGCCCACTTTCCTCAATTT 59.397 50.000 0.00 0.00 0.00 1.82
181 182 0.251341 AGCGCCCACTTTCCTCAATT 60.251 50.000 2.29 0.00 0.00 2.32
182 183 0.962356 CAGCGCCCACTTTCCTCAAT 60.962 55.000 2.29 0.00 0.00 2.57
183 184 1.600636 CAGCGCCCACTTTCCTCAA 60.601 57.895 2.29 0.00 0.00 3.02
184 185 2.032528 CAGCGCCCACTTTCCTCA 59.967 61.111 2.29 0.00 0.00 3.86
185 186 0.321298 TAACAGCGCCCACTTTCCTC 60.321 55.000 2.29 0.00 0.00 3.71
186 187 0.321653 CTAACAGCGCCCACTTTCCT 60.322 55.000 2.29 0.00 0.00 3.36
187 188 0.321298 TCTAACAGCGCCCACTTTCC 60.321 55.000 2.29 0.00 0.00 3.13
188 189 1.079503 CTCTAACAGCGCCCACTTTC 58.920 55.000 2.29 0.00 0.00 2.62
189 190 0.321653 CCTCTAACAGCGCCCACTTT 60.322 55.000 2.29 0.00 0.00 2.66
190 191 1.296715 CCTCTAACAGCGCCCACTT 59.703 57.895 2.29 0.00 0.00 3.16
191 192 2.660064 CCCTCTAACAGCGCCCACT 61.660 63.158 2.29 0.00 0.00 4.00
192 193 1.972660 ATCCCTCTAACAGCGCCCAC 61.973 60.000 2.29 0.00 0.00 4.61
193 194 1.689233 ATCCCTCTAACAGCGCCCA 60.689 57.895 2.29 0.00 0.00 5.36
194 195 1.227674 CATCCCTCTAACAGCGCCC 60.228 63.158 2.29 0.00 0.00 6.13
195 196 1.889573 GCATCCCTCTAACAGCGCC 60.890 63.158 2.29 0.00 0.00 6.53
196 197 0.533755 ATGCATCCCTCTAACAGCGC 60.534 55.000 0.00 0.00 0.00 5.92
197 198 1.506493 GATGCATCCCTCTAACAGCG 58.494 55.000 16.23 0.00 0.00 5.18
198 199 1.141657 TGGATGCATCCCTCTAACAGC 59.858 52.381 36.97 13.29 46.59 4.40
199 200 2.809665 GCTGGATGCATCCCTCTAACAG 60.810 54.545 36.97 26.98 46.59 3.16
200 201 1.141657 GCTGGATGCATCCCTCTAACA 59.858 52.381 36.97 19.26 46.59 2.41
201 202 1.875576 CGCTGGATGCATCCCTCTAAC 60.876 57.143 36.97 20.55 46.59 2.34
202 203 0.394192 CGCTGGATGCATCCCTCTAA 59.606 55.000 36.97 20.63 46.59 2.10
203 204 0.469892 TCGCTGGATGCATCCCTCTA 60.470 55.000 36.97 20.98 46.59 2.43
204 205 1.126329 ATCGCTGGATGCATCCCTCT 61.126 55.000 36.97 17.87 46.59 3.69
205 206 0.250640 AATCGCTGGATGCATCCCTC 60.251 55.000 36.97 27.32 46.59 4.30
206 207 0.250640 GAATCGCTGGATGCATCCCT 60.251 55.000 36.97 17.69 46.59 4.20
207 208 0.535780 TGAATCGCTGGATGCATCCC 60.536 55.000 36.97 23.94 46.59 3.85
208 209 0.590195 GTGAATCGCTGGATGCATCC 59.410 55.000 34.71 34.71 40.37 3.51
209 210 1.302366 TGTGAATCGCTGGATGCATC 58.698 50.000 18.81 18.81 40.37 3.91
210 211 1.753930 TTGTGAATCGCTGGATGCAT 58.246 45.000 0.00 0.00 40.37 3.96
211 212 1.199789 GTTTGTGAATCGCTGGATGCA 59.800 47.619 0.00 0.00 43.06 3.96
212 213 1.470098 AGTTTGTGAATCGCTGGATGC 59.530 47.619 0.00 0.00 38.57 3.91
213 214 3.837213 AAGTTTGTGAATCGCTGGATG 57.163 42.857 0.00 0.00 31.83 3.51
214 215 3.820467 TGAAAGTTTGTGAATCGCTGGAT 59.180 39.130 0.00 0.00 0.00 3.41
215 216 3.210227 TGAAAGTTTGTGAATCGCTGGA 58.790 40.909 0.00 0.00 0.00 3.86
216 217 3.624326 TGAAAGTTTGTGAATCGCTGG 57.376 42.857 0.00 0.00 0.00 4.85
217 218 4.161333 GGATGAAAGTTTGTGAATCGCTG 58.839 43.478 0.00 0.00 0.00 5.18
218 219 3.820467 TGGATGAAAGTTTGTGAATCGCT 59.180 39.130 0.00 0.00 0.00 4.93
219 220 4.159377 TGGATGAAAGTTTGTGAATCGC 57.841 40.909 0.00 0.00 0.00 4.58
220 221 4.612614 CGTTGGATGAAAGTTTGTGAATCG 59.387 41.667 0.00 0.00 0.00 3.34
221 222 4.917415 CCGTTGGATGAAAGTTTGTGAATC 59.083 41.667 0.00 0.00 0.00 2.52
222 223 4.795962 GCCGTTGGATGAAAGTTTGTGAAT 60.796 41.667 0.00 0.00 0.00 2.57
223 224 3.490078 GCCGTTGGATGAAAGTTTGTGAA 60.490 43.478 0.00 0.00 0.00 3.18
224 225 2.034053 GCCGTTGGATGAAAGTTTGTGA 59.966 45.455 0.00 0.00 0.00 3.58
225 226 2.393764 GCCGTTGGATGAAAGTTTGTG 58.606 47.619 0.00 0.00 0.00 3.33
226 227 1.339929 GGCCGTTGGATGAAAGTTTGT 59.660 47.619 0.00 0.00 0.00 2.83
227 228 1.339610 TGGCCGTTGGATGAAAGTTTG 59.660 47.619 0.00 0.00 0.00 2.93
228 229 1.698506 TGGCCGTTGGATGAAAGTTT 58.301 45.000 0.00 0.00 0.00 2.66
229 230 1.818674 GATGGCCGTTGGATGAAAGTT 59.181 47.619 0.00 0.00 0.00 2.66
230 231 1.463674 GATGGCCGTTGGATGAAAGT 58.536 50.000 0.00 0.00 0.00 2.66
231 232 0.740737 GGATGGCCGTTGGATGAAAG 59.259 55.000 0.00 0.00 0.00 2.62
232 233 0.038890 TGGATGGCCGTTGGATGAAA 59.961 50.000 0.00 0.00 36.79 2.69
233 234 0.394216 CTGGATGGCCGTTGGATGAA 60.394 55.000 0.00 0.00 36.79 2.57
234 235 1.224315 CTGGATGGCCGTTGGATGA 59.776 57.895 0.00 0.00 36.79 2.92
235 236 1.077501 ACTGGATGGCCGTTGGATG 60.078 57.895 0.00 0.00 36.79 3.51
236 237 1.077501 CACTGGATGGCCGTTGGAT 60.078 57.895 0.00 0.00 36.79 3.41
237 238 2.350895 CACTGGATGGCCGTTGGA 59.649 61.111 0.00 0.00 36.79 3.53
238 239 2.751436 CCACTGGATGGCCGTTGG 60.751 66.667 0.00 0.00 43.24 3.77
246 247 0.608130 TTCCGTCAGACCACTGGATG 59.392 55.000 0.71 0.36 43.60 3.51
247 248 1.276421 CTTTCCGTCAGACCACTGGAT 59.724 52.381 0.71 0.00 43.60 3.41
248 249 0.679505 CTTTCCGTCAGACCACTGGA 59.320 55.000 0.71 0.00 43.60 3.86
249 250 0.393077 ACTTTCCGTCAGACCACTGG 59.607 55.000 0.00 0.00 43.60 4.00
250 251 2.240493 AACTTTCCGTCAGACCACTG 57.760 50.000 0.00 0.00 44.66 3.66
251 252 2.299297 CCTAACTTTCCGTCAGACCACT 59.701 50.000 0.00 0.00 0.00 4.00
252 253 2.612221 CCCTAACTTTCCGTCAGACCAC 60.612 54.545 0.00 0.00 0.00 4.16
253 254 1.621814 CCCTAACTTTCCGTCAGACCA 59.378 52.381 0.00 0.00 0.00 4.02
254 255 1.897802 TCCCTAACTTTCCGTCAGACC 59.102 52.381 0.00 0.00 0.00 3.85
255 256 3.194968 TGATCCCTAACTTTCCGTCAGAC 59.805 47.826 0.00 0.00 0.00 3.51
256 257 3.437213 TGATCCCTAACTTTCCGTCAGA 58.563 45.455 0.00 0.00 0.00 3.27
257 258 3.195825 ACTGATCCCTAACTTTCCGTCAG 59.804 47.826 0.00 0.00 38.18 3.51
258 259 3.170717 ACTGATCCCTAACTTTCCGTCA 58.829 45.455 0.00 0.00 0.00 4.35
259 260 3.889520 ACTGATCCCTAACTTTCCGTC 57.110 47.619 0.00 0.00 0.00 4.79
260 261 4.351127 ACTACTGATCCCTAACTTTCCGT 58.649 43.478 0.00 0.00 0.00 4.69
261 262 4.645588 AGACTACTGATCCCTAACTTTCCG 59.354 45.833 0.00 0.00 0.00 4.30
262 263 5.657302 TCAGACTACTGATCCCTAACTTTCC 59.343 44.000 0.00 0.00 46.55 3.13
263 264 6.777213 TCAGACTACTGATCCCTAACTTTC 57.223 41.667 0.00 0.00 46.55 2.62
276 277 3.904717 ACCACTAGGGATCAGACTACTG 58.095 50.000 0.00 0.00 41.85 2.74
277 278 4.538738 GAACCACTAGGGATCAGACTACT 58.461 47.826 0.00 0.00 38.31 2.57
278 279 3.637694 GGAACCACTAGGGATCAGACTAC 59.362 52.174 0.00 0.00 40.12 2.73
279 280 3.912248 GGAACCACTAGGGATCAGACTA 58.088 50.000 0.00 0.00 40.12 2.59
280 281 2.753247 GGAACCACTAGGGATCAGACT 58.247 52.381 0.00 0.00 40.12 3.24
296 297 4.071961 ACTTCCAAATGCAAAAGGGAAC 57.928 40.909 8.02 0.00 34.19 3.62
297 298 4.702831 GAACTTCCAAATGCAAAAGGGAA 58.297 39.130 10.74 10.74 36.31 3.97
298 299 3.243704 CGAACTTCCAAATGCAAAAGGGA 60.244 43.478 0.00 0.00 0.00 4.20
299 300 3.059166 CGAACTTCCAAATGCAAAAGGG 58.941 45.455 0.00 0.00 0.00 3.95
300 301 3.976169 TCGAACTTCCAAATGCAAAAGG 58.024 40.909 0.00 0.00 0.00 3.11
301 302 6.473455 GGATATCGAACTTCCAAATGCAAAAG 59.527 38.462 0.00 0.00 0.00 2.27
302 303 6.152661 AGGATATCGAACTTCCAAATGCAAAA 59.847 34.615 12.50 0.00 31.65 2.44
303 304 5.652014 AGGATATCGAACTTCCAAATGCAAA 59.348 36.000 12.50 0.00 31.65 3.68
304 305 5.192927 AGGATATCGAACTTCCAAATGCAA 58.807 37.500 12.50 0.00 31.65 4.08
305 306 4.780815 AGGATATCGAACTTCCAAATGCA 58.219 39.130 12.50 0.00 31.65 3.96
306 307 5.752712 GAAGGATATCGAACTTCCAAATGC 58.247 41.667 12.50 0.00 35.70 3.56
313 314 4.402056 TGGTGGAAGGATATCGAACTTC 57.598 45.455 10.23 10.23 39.80 3.01
314 315 4.837093 TTGGTGGAAGGATATCGAACTT 57.163 40.909 0.00 0.00 0.00 2.66
315 316 4.019681 TGTTTGGTGGAAGGATATCGAACT 60.020 41.667 0.00 0.00 0.00 3.01
316 317 4.258543 TGTTTGGTGGAAGGATATCGAAC 58.741 43.478 0.00 0.00 0.00 3.95
317 318 4.561500 TGTTTGGTGGAAGGATATCGAA 57.438 40.909 0.00 0.00 0.00 3.71
318 319 4.771114 ATGTTTGGTGGAAGGATATCGA 57.229 40.909 0.00 0.00 0.00 3.59
319 320 5.590259 AGAAATGTTTGGTGGAAGGATATCG 59.410 40.000 0.00 0.00 0.00 2.92
320 321 6.378280 ACAGAAATGTTTGGTGGAAGGATATC 59.622 38.462 0.00 0.00 0.00 1.63
321 322 6.256053 ACAGAAATGTTTGGTGGAAGGATAT 58.744 36.000 0.00 0.00 0.00 1.63
322 323 5.640147 ACAGAAATGTTTGGTGGAAGGATA 58.360 37.500 0.00 0.00 0.00 2.59
323 324 4.482990 ACAGAAATGTTTGGTGGAAGGAT 58.517 39.130 0.00 0.00 0.00 3.24
324 325 3.909732 ACAGAAATGTTTGGTGGAAGGA 58.090 40.909 0.00 0.00 0.00 3.36
325 326 4.670896 AACAGAAATGTTTGGTGGAAGG 57.329 40.909 0.00 0.00 0.00 3.46
326 327 6.391227 AGTAACAGAAATGTTTGGTGGAAG 57.609 37.500 0.00 0.00 33.59 3.46
327 328 5.300792 GGAGTAACAGAAATGTTTGGTGGAA 59.699 40.000 0.00 0.00 33.59 3.53
328 329 4.825085 GGAGTAACAGAAATGTTTGGTGGA 59.175 41.667 0.00 0.00 33.59 4.02
329 330 4.022329 GGGAGTAACAGAAATGTTTGGTGG 60.022 45.833 0.00 0.00 33.59 4.61
330 331 4.827284 AGGGAGTAACAGAAATGTTTGGTG 59.173 41.667 0.00 0.00 33.59 4.17
331 332 5.061721 AGGGAGTAACAGAAATGTTTGGT 57.938 39.130 0.00 0.00 33.59 3.67
332 333 4.459337 GGAGGGAGTAACAGAAATGTTTGG 59.541 45.833 0.00 0.00 33.59 3.28
333 334 5.070001 TGGAGGGAGTAACAGAAATGTTTG 58.930 41.667 0.00 0.00 33.59 2.93
334 335 5.319043 TGGAGGGAGTAACAGAAATGTTT 57.681 39.130 0.00 0.00 33.59 2.83
335 336 4.993705 TGGAGGGAGTAACAGAAATGTT 57.006 40.909 0.00 0.00 35.93 2.71
336 337 5.726793 AGTATGGAGGGAGTAACAGAAATGT 59.273 40.000 0.00 0.00 0.00 2.71
337 338 6.240549 AGTATGGAGGGAGTAACAGAAATG 57.759 41.667 0.00 0.00 0.00 2.32
338 339 7.363031 TCTAGTATGGAGGGAGTAACAGAAAT 58.637 38.462 0.00 0.00 0.00 2.17
339 340 6.738635 TCTAGTATGGAGGGAGTAACAGAAA 58.261 40.000 0.00 0.00 0.00 2.52
340 341 6.337185 TCTAGTATGGAGGGAGTAACAGAA 57.663 41.667 0.00 0.00 0.00 3.02
341 342 5.690632 GCTCTAGTATGGAGGGAGTAACAGA 60.691 48.000 0.00 0.00 44.82 3.41
342 343 4.521256 GCTCTAGTATGGAGGGAGTAACAG 59.479 50.000 0.00 0.00 44.82 3.16
343 344 4.168283 AGCTCTAGTATGGAGGGAGTAACA 59.832 45.833 0.00 0.00 44.82 2.41
344 345 4.521256 CAGCTCTAGTATGGAGGGAGTAAC 59.479 50.000 0.00 0.00 44.82 2.50
345 346 4.730966 CAGCTCTAGTATGGAGGGAGTAA 58.269 47.826 0.00 0.00 44.82 2.24
346 347 3.498841 GCAGCTCTAGTATGGAGGGAGTA 60.499 52.174 0.00 0.00 44.82 2.59
347 348 2.754867 GCAGCTCTAGTATGGAGGGAGT 60.755 54.545 0.00 0.00 44.82 3.85
348 349 1.892474 GCAGCTCTAGTATGGAGGGAG 59.108 57.143 0.00 0.00 44.82 4.30
349 350 1.819697 CGCAGCTCTAGTATGGAGGGA 60.820 57.143 0.00 0.00 44.82 4.20
350 351 0.600557 CGCAGCTCTAGTATGGAGGG 59.399 60.000 0.00 0.00 44.82 4.30
351 352 0.600557 CCGCAGCTCTAGTATGGAGG 59.399 60.000 0.00 0.00 44.82 4.30
353 354 0.755327 TGCCGCAGCTCTAGTATGGA 60.755 55.000 0.00 0.00 40.80 3.41
354 355 0.104855 TTGCCGCAGCTCTAGTATGG 59.895 55.000 0.00 0.00 40.80 2.74
355 356 2.160822 ATTGCCGCAGCTCTAGTATG 57.839 50.000 0.00 0.00 40.80 2.39
356 357 2.918712 AATTGCCGCAGCTCTAGTAT 57.081 45.000 0.00 0.00 40.80 2.12
357 358 3.812156 TTAATTGCCGCAGCTCTAGTA 57.188 42.857 0.00 0.00 40.80 1.82
358 359 2.691409 TTAATTGCCGCAGCTCTAGT 57.309 45.000 0.00 0.00 40.80 2.57
359 360 4.285292 CAAATTAATTGCCGCAGCTCTAG 58.715 43.478 0.39 0.00 40.80 2.43
360 361 3.066621 CCAAATTAATTGCCGCAGCTCTA 59.933 43.478 0.39 0.00 40.80 2.43
361 362 2.159198 CCAAATTAATTGCCGCAGCTCT 60.159 45.455 0.39 0.00 40.80 4.09
362 363 2.159254 TCCAAATTAATTGCCGCAGCTC 60.159 45.455 0.39 0.00 40.80 4.09
363 364 1.824230 TCCAAATTAATTGCCGCAGCT 59.176 42.857 0.39 0.00 40.80 4.24
364 365 2.292103 TCCAAATTAATTGCCGCAGC 57.708 45.000 0.39 0.00 37.73 5.25
365 366 3.556775 CCAATCCAAATTAATTGCCGCAG 59.443 43.478 0.39 0.00 37.73 5.18
366 367 3.196469 TCCAATCCAAATTAATTGCCGCA 59.804 39.130 0.39 0.00 37.73 5.69
367 368 3.791245 TCCAATCCAAATTAATTGCCGC 58.209 40.909 0.39 0.00 37.73 6.53
368 369 4.370917 CCTCCAATCCAAATTAATTGCCG 58.629 43.478 0.39 0.00 37.73 5.69
369 370 4.408596 TCCCTCCAATCCAAATTAATTGCC 59.591 41.667 0.39 0.00 37.73 4.52
370 371 5.129320 ACTCCCTCCAATCCAAATTAATTGC 59.871 40.000 0.39 0.00 37.73 3.56
371 372 6.796785 ACTCCCTCCAATCCAAATTAATTG 57.203 37.500 0.39 0.00 38.84 2.32
372 373 7.652554 AGTACTCCCTCCAATCCAAATTAATT 58.347 34.615 0.00 0.00 0.00 1.40
373 374 7.226059 AGTACTCCCTCCAATCCAAATTAAT 57.774 36.000 0.00 0.00 0.00 1.40
374 375 6.652205 AGTACTCCCTCCAATCCAAATTAA 57.348 37.500 0.00 0.00 0.00 1.40
375 376 6.652205 AAGTACTCCCTCCAATCCAAATTA 57.348 37.500 0.00 0.00 0.00 1.40
376 377 5.536497 AAGTACTCCCTCCAATCCAAATT 57.464 39.130 0.00 0.00 0.00 1.82
377 378 5.536497 AAAGTACTCCCTCCAATCCAAAT 57.464 39.130 0.00 0.00 0.00 2.32
378 379 5.333566 AAAAGTACTCCCTCCAATCCAAA 57.666 39.130 0.00 0.00 0.00 3.28
379 380 5.333566 AAAAAGTACTCCCTCCAATCCAA 57.666 39.130 0.00 0.00 0.00 3.53
408 409 7.805071 TGGTTTGCAAGTAACAAAAATGTTTTG 59.195 29.630 11.02 11.02 38.64 2.44
409 410 7.875971 TGGTTTGCAAGTAACAAAAATGTTTT 58.124 26.923 0.00 0.00 38.64 2.43
410 411 7.440523 TGGTTTGCAAGTAACAAAAATGTTT 57.559 28.000 0.00 0.00 38.64 2.83
469 471 4.201822 GCTTAGCCCATTTCGTGTTCTTAG 60.202 45.833 0.00 0.00 0.00 2.18
471 473 2.488153 GCTTAGCCCATTTCGTGTTCTT 59.512 45.455 0.00 0.00 0.00 2.52
499 506 1.929806 AACGCAGACGGACGCATCTA 61.930 55.000 0.00 0.00 46.04 1.98
525 532 2.328099 CCCTCTTTGTCGTGCTGGC 61.328 63.158 0.00 0.00 0.00 4.85
526 533 0.671781 CTCCCTCTTTGTCGTGCTGG 60.672 60.000 0.00 0.00 0.00 4.85
527 534 1.294659 GCTCCCTCTTTGTCGTGCTG 61.295 60.000 0.00 0.00 0.00 4.41
528 535 1.004440 GCTCCCTCTTTGTCGTGCT 60.004 57.895 0.00 0.00 0.00 4.40
535 543 2.043227 CTAGGTAGGGCTCCCTCTTTG 58.957 57.143 11.41 0.00 44.43 2.77
546 555 1.897615 CGGCGGAGACTAGGTAGGG 60.898 68.421 0.00 0.00 0.00 3.53
574 589 0.320697 GGAGTGGTGTGGAGTGGTAC 59.679 60.000 0.00 0.00 0.00 3.34
576 591 1.074471 AGGAGTGGTGTGGAGTGGT 60.074 57.895 0.00 0.00 0.00 4.16
684 798 1.369321 GGGCGATGATCTCCCAGAC 59.631 63.158 15.43 0.00 41.08 3.51
700 814 4.060667 ATTTGGGGGACAGGCGGG 62.061 66.667 0.00 0.00 0.00 6.13
708 822 1.308746 GGAGGAGGGATTTGGGGGA 60.309 63.158 0.00 0.00 0.00 4.81
776 890 1.072505 GTGGTGGGCGAGGAGAAAA 59.927 57.895 0.00 0.00 0.00 2.29
827 941 0.370273 CGCCGCACTTCTGATTGTAC 59.630 55.000 0.00 0.00 0.00 2.90
867 981 4.000928 AGGGGATGATGTCTAGTGACTT 57.999 45.455 0.00 0.00 43.29 3.01
890 1004 1.828081 GACCCCTATTCGGTGGTCC 59.172 63.158 0.00 0.00 42.62 4.46
953 1076 0.733566 GATGCACGGACGGACGTAAA 60.734 55.000 6.34 0.00 46.75 2.01
988 1111 1.014044 GCGCTCATGTTGAGGACGAA 61.014 55.000 0.00 0.00 44.43 3.85
1007 1130 1.293924 GATGATGCTGAACTGACCCG 58.706 55.000 0.00 0.00 0.00 5.28
1024 1147 0.396435 TGACGAGTTGCAGGGTTGAT 59.604 50.000 0.00 0.00 0.00 2.57
1056 1179 0.669625 GGTGAGTGTCGGTAACAGGC 60.670 60.000 0.00 0.00 38.97 4.85
1116 3355 2.731571 GGGTGCCAGCAGTATCCGA 61.732 63.158 0.00 0.00 0.00 4.55
1155 3394 2.620886 GGAGCCTAGTGTGTAGACCTGA 60.621 54.545 0.00 0.00 0.00 3.86
1225 3470 0.249911 AGAAGTGTGAAGGGCGACAC 60.250 55.000 0.00 0.00 42.39 3.67
1317 3562 3.157252 GGAGCGAGCATCTCCCCA 61.157 66.667 7.46 0.00 43.32 4.96
1404 3667 4.130118 CAGTATTAAGACAGGACATGCCC 58.870 47.826 2.62 0.00 37.37 5.36
1414 3677 9.461312 AATGCTGGTAAATTCAGTATTAAGACA 57.539 29.630 2.62 0.00 42.68 3.41
1462 3725 0.613012 GCCCAGACCCTGCTTTCATT 60.613 55.000 0.00 0.00 0.00 2.57
1512 3775 0.167470 CAAACTGCATGGTGAGCTCG 59.833 55.000 9.64 0.00 0.00 5.03
1967 4246 3.306919 CCACCCAAAAGGACATTCAATGG 60.307 47.826 1.58 0.00 39.89 3.16
2049 4329 6.019559 CCATGAGTCAGAAATATGTGTACACG 60.020 42.308 20.61 4.37 0.00 4.49
2156 4446 8.091449 AGGTAAATAAACAGAGACAAGAGACAG 58.909 37.037 0.00 0.00 0.00 3.51
2258 4548 5.649782 AGGAATCAAATGTACCTTTGCTG 57.350 39.130 16.22 0.00 36.32 4.41
2321 4615 2.424956 GCAAGCCAACAAGGAGGATAAG 59.575 50.000 0.00 0.00 41.22 1.73
2370 4664 3.733024 TTCAATTTAACTAGTGCGCCG 57.267 42.857 4.18 0.00 0.00 6.46
2429 4723 3.681417 TCATGACGAAGAATGAACTGCAG 59.319 43.478 13.48 13.48 32.99 4.41
2444 4738 3.304458 CCAGATGCAATGGAATCATGACG 60.304 47.826 14.64 0.00 40.51 4.35
2445 4739 3.635373 ACCAGATGCAATGGAATCATGAC 59.365 43.478 23.99 0.00 40.51 3.06
2484 4779 6.751425 TGCAACACAGACAGAATTGTAAAAAG 59.249 34.615 0.00 0.00 37.76 2.27
2540 4835 6.791887 TCAGTAGAAGTTTCATTTCAGCTG 57.208 37.500 7.63 7.63 33.68 4.24
2599 4968 1.167851 TAGTGGACCCAAGTCGTACG 58.832 55.000 9.53 9.53 44.54 3.67
2606 4975 2.486191 GCCATCTCATAGTGGACCCAAG 60.486 54.545 0.00 0.00 37.72 3.61
2665 5043 5.697473 TGAGACGAACCAAATATGCAAAA 57.303 34.783 0.00 0.00 0.00 2.44
2668 5046 4.323417 ACTTGAGACGAACCAAATATGCA 58.677 39.130 0.00 0.00 0.00 3.96
2676 5054 3.536956 AACTTGACTTGAGACGAACCA 57.463 42.857 0.00 0.00 0.00 3.67
2712 5097 7.991084 AACAGTCAAAGATTCTTGATCATGA 57.009 32.000 7.19 7.19 37.63 3.07
2713 5098 9.552114 GTTAACAGTCAAAGATTCTTGATCATG 57.448 33.333 0.00 0.00 37.63 3.07
2714 5099 9.288576 TGTTAACAGTCAAAGATTCTTGATCAT 57.711 29.630 3.59 0.00 37.63 2.45
2715 5100 8.559536 GTGTTAACAGTCAAAGATTCTTGATCA 58.440 33.333 8.98 0.00 37.63 2.92
2716 5101 8.778358 AGTGTTAACAGTCAAAGATTCTTGATC 58.222 33.333 8.98 0.00 37.63 2.92
2717 5102 8.682936 AGTGTTAACAGTCAAAGATTCTTGAT 57.317 30.769 8.98 0.00 37.63 2.57
2718 5103 7.987458 AGAGTGTTAACAGTCAAAGATTCTTGA 59.013 33.333 34.06 0.00 46.15 3.02
2719 5104 8.147642 AGAGTGTTAACAGTCAAAGATTCTTG 57.852 34.615 34.06 0.00 46.15 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.