Multiple sequence alignment - TraesCS3D01G461400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G461400 chr3D 100.000 3284 0 0 1 3284 566074362 566077645 0.000000e+00 6065
1 TraesCS3D01G461400 chr3D 88.863 1293 123 13 1022 2308 566001339 566002616 0.000000e+00 1570
2 TraesCS3D01G461400 chr3D 83.047 991 130 19 1348 2315 551400232 551399257 0.000000e+00 865
3 TraesCS3D01G461400 chr3D 88.554 498 50 4 1819 2315 551386039 551386530 6.070000e-167 597
4 TraesCS3D01G461400 chr3D 75.960 703 131 25 1101 1790 551371237 551371914 8.790000e-86 327
5 TraesCS3D01G461400 chr3D 82.609 207 27 6 1029 1228 551403122 551402918 1.210000e-39 174
6 TraesCS3D01G461400 chr3D 83.251 203 21 8 1029 1219 551427645 551427444 1.210000e-39 174
7 TraesCS3D01G461400 chr3D 87.324 142 8 6 600 737 566000930 566001065 1.580000e-33 154
8 TraesCS3D01G461400 chr3D 77.695 269 34 17 2739 2987 452957593 452957331 1.230000e-29 141
9 TraesCS3D01G461400 chr3D 75.211 355 49 20 2671 2991 576695301 576695650 7.390000e-27 132
10 TraesCS3D01G461400 chr3A 89.877 2687 160 41 21 2650 701224191 701221560 0.000000e+00 3352
11 TraesCS3D01G461400 chr3A 81.315 1354 203 32 995 2315 688596546 688597882 0.000000e+00 1053
12 TraesCS3D01G461400 chr3A 79.912 453 49 17 17 450 501927245 501927674 8.910000e-76 294
13 TraesCS3D01G461400 chr3A 82.083 240 32 10 3041 3279 552303535 552303306 9.300000e-46 195
14 TraesCS3D01G461400 chr3A 81.328 241 32 10 3043 3279 489755893 489755662 2.010000e-42 183
15 TraesCS3D01G461400 chr3A 81.070 243 26 14 2737 2961 626019643 626019403 3.370000e-40 176
16 TraesCS3D01G461400 chr3B 92.022 1780 99 26 583 2349 754620717 754622466 0.000000e+00 2460
17 TraesCS3D01G461400 chr3B 81.199 1335 208 27 1037 2345 731135473 731136790 0.000000e+00 1035
18 TraesCS3D01G461400 chr3B 81.184 1334 210 25 1037 2345 731193525 731194842 0.000000e+00 1035
19 TraesCS3D01G461400 chr3B 88.991 436 31 8 19 439 754619207 754619640 1.040000e-144 523
20 TraesCS3D01G461400 chr3B 96.026 151 5 1 441 591 754620103 754620252 9.100000e-61 244
21 TraesCS3D01G461400 chr3B 81.070 243 35 8 3044 3283 813745964 813745730 2.010000e-42 183
22 TraesCS3D01G461400 chr3B 87.302 126 11 4 330 450 607478327 607478202 4.420000e-29 139
23 TraesCS3D01G461400 chr3B 76.471 255 40 14 2737 2976 22347536 22347785 1.600000e-23 121
24 TraesCS3D01G461400 chr7B 80.976 410 47 13 72 450 592543555 592543146 2.480000e-76 296
25 TraesCS3D01G461400 chr7B 80.779 411 42 19 71 450 684439957 684440361 1.490000e-73 287
26 TraesCS3D01G461400 chr7B 89.256 121 9 4 334 450 547319299 547319419 7.340000e-32 148
27 TraesCS3D01G461400 chr7B 87.402 127 11 4 330 451 547303575 547303449 1.230000e-29 141
28 TraesCS3D01G461400 chr7B 88.889 117 9 4 338 450 741566062 741566178 1.230000e-29 141
29 TraesCS3D01G461400 chr2A 78.541 466 44 19 17 450 17611894 17611453 4.210000e-64 255
30 TraesCS3D01G461400 chr2A 85.185 108 16 0 2880 2987 29879624 29879731 9.630000e-21 111
31 TraesCS3D01G461400 chr5A 82.083 240 30 11 3044 3279 67525022 67524792 3.340000e-45 193
32 TraesCS3D01G461400 chr7A 81.328 241 32 10 3043 3279 198415633 198415402 2.010000e-42 183
33 TraesCS3D01G461400 chr7A 80.723 249 35 10 3039 3283 116601408 116601169 7.240000e-42 182
34 TraesCS3D01G461400 chr5B 81.328 241 32 10 3043 3279 40480705 40480936 2.010000e-42 183
35 TraesCS3D01G461400 chr5B 88.983 118 9 4 337 450 392500861 392500978 3.420000e-30 143
36 TraesCS3D01G461400 chr2B 81.250 240 34 8 3043 3279 24866218 24865987 2.010000e-42 183
37 TraesCS3D01G461400 chr6A 81.250 240 31 13 3044 3279 36071015 36071244 7.240000e-42 182
38 TraesCS3D01G461400 chr1D 79.923 259 35 14 2737 2979 435753503 435753760 1.210000e-39 174
39 TraesCS3D01G461400 chr1D 80.402 199 30 9 1 197 460732984 460733175 3.420000e-30 143
40 TraesCS3D01G461400 chr1D 78.744 207 37 4 1 207 193651302 193651501 7.390000e-27 132
41 TraesCS3D01G461400 chr1D 88.095 84 10 0 2733 2816 10162234 10162317 2.090000e-17 100
42 TraesCS3D01G461400 chr1B 79.259 270 37 16 2737 2991 589068127 589068392 1.570000e-38 171
43 TraesCS3D01G461400 chr1A 79.508 244 33 14 2737 2966 533144750 533144990 1.220000e-34 158
44 TraesCS3D01G461400 chr1A 80.226 177 16 11 2736 2894 463156704 463156529 7.450000e-22 115
45 TraesCS3D01G461400 chrUn 88.281 128 10 4 330 452 214922112 214921985 7.340000e-32 148
46 TraesCS3D01G461400 chrUn 88.281 128 10 4 330 452 354054328 354054455 7.340000e-32 148
47 TraesCS3D01G461400 chr6D 80.000 205 32 9 1 203 8646929 8646732 3.420000e-30 143
48 TraesCS3D01G461400 chr6D 79.188 197 33 5 1 197 255525191 255525379 2.660000e-26 130
49 TraesCS3D01G461400 chr2D 79.902 204 32 7 1 203 308023308 308023503 1.230000e-29 141
50 TraesCS3D01G461400 chr2D 87.200 125 12 3 333 453 451689298 451689174 4.420000e-29 139
51 TraesCS3D01G461400 chr2D 79.894 189 17 8 281 450 78435293 78435479 5.760000e-23 119
52 TraesCS3D01G461400 chr7D 79.703 202 22 15 2709 2894 2220638 2220440 9.560000e-26 128
53 TraesCS3D01G461400 chr7D 76.834 259 31 21 2666 2898 64473881 64473626 5.760000e-23 119


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G461400 chr3D 566074362 566077645 3283 False 6065.000000 6065 100.000000 1 3284 1 chr3D.!!$F3 3283
1 TraesCS3D01G461400 chr3D 566000930 566002616 1686 False 862.000000 1570 88.093500 600 2308 2 chr3D.!!$F5 1708
2 TraesCS3D01G461400 chr3D 551399257 551403122 3865 True 519.500000 865 82.828000 1029 2315 2 chr3D.!!$R3 1286
3 TraesCS3D01G461400 chr3D 551371237 551371914 677 False 327.000000 327 75.960000 1101 1790 1 chr3D.!!$F1 689
4 TraesCS3D01G461400 chr3A 701221560 701224191 2631 True 3352.000000 3352 89.877000 21 2650 1 chr3A.!!$R4 2629
5 TraesCS3D01G461400 chr3A 688596546 688597882 1336 False 1053.000000 1053 81.315000 995 2315 1 chr3A.!!$F2 1320
6 TraesCS3D01G461400 chr3B 754619207 754622466 3259 False 1075.666667 2460 92.346333 19 2349 3 chr3B.!!$F4 2330
7 TraesCS3D01G461400 chr3B 731135473 731136790 1317 False 1035.000000 1035 81.199000 1037 2345 1 chr3B.!!$F2 1308
8 TraesCS3D01G461400 chr3B 731193525 731194842 1317 False 1035.000000 1035 81.184000 1037 2345 1 chr3B.!!$F3 1308

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
113 114 0.032416 GAGAGGGGGTAGTAGTGGCA 60.032 60.000 0.0 0.0 0.00 4.92 F
277 280 0.327924 TGGCCCCACATGTCAGTTAG 59.672 55.000 0.0 0.0 0.00 2.34 F
278 281 0.618458 GGCCCCACATGTCAGTTAGA 59.382 55.000 0.0 0.0 0.00 2.10 F
543 1031 1.201965 GCTGAAGGAGCGAATTGAACG 60.202 52.381 0.0 0.0 38.15 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1518 5216 1.142748 CAGCGGTAGCCTTGAGAGG 59.857 63.158 0.00 0.0 46.67 3.69 R
2070 5785 1.297304 GCACACGGTGTTGTCGTTG 60.297 57.895 11.82 0.0 38.94 4.10 R
2271 5986 8.085296 AGTGACACACTCTTCTAATAAGAACTG 58.915 37.037 8.59 0.0 41.21 3.16 R
2292 6011 0.315568 AGACTCGCAAGACCAGTGAC 59.684 55.000 0.00 0.0 45.01 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 1.682684 GGGAGAAGAGAGCCACGGA 60.683 63.158 0.00 0.00 0.00 4.69
90 91 1.356398 ACGGAGAGGAGAAGAGGTTCT 59.644 52.381 0.00 0.00 46.32 3.01
103 104 2.125225 GTTCTGGGGAGAGGGGGT 59.875 66.667 0.00 0.00 0.00 4.95
113 114 0.032416 GAGAGGGGGTAGTAGTGGCA 60.032 60.000 0.00 0.00 0.00 4.92
204 205 3.063084 GGTGCTCCGTCGACCTCT 61.063 66.667 10.58 0.00 0.00 3.69
209 210 1.444553 CTCCGTCGACCTCTTGTGC 60.445 63.158 10.58 0.00 0.00 4.57
277 280 0.327924 TGGCCCCACATGTCAGTTAG 59.672 55.000 0.00 0.00 0.00 2.34
278 281 0.618458 GGCCCCACATGTCAGTTAGA 59.382 55.000 0.00 0.00 0.00 2.10
307 322 6.671614 AACAATCAGTTTTCTTACGTGTGA 57.328 33.333 0.00 0.00 37.03 3.58
334 349 5.220662 CCCAACTGTCATAATCACGATCAAC 60.221 44.000 0.00 0.00 0.00 3.18
386 413 3.197766 CCCTGACTTGGTAGTTATCAGCA 59.802 47.826 0.00 0.00 33.84 4.41
543 1031 1.201965 GCTGAAGGAGCGAATTGAACG 60.202 52.381 0.00 0.00 38.15 3.95
711 1678 2.288825 CCCGCAAATCTCGATAGCCTTA 60.289 50.000 0.00 0.00 0.00 2.69
993 2098 2.979813 CAAGGTTTAGCAAATCGTGTGC 59.020 45.455 0.00 0.43 42.55 4.57
1005 2110 2.977456 GTGTGCCGTGCCATGTCA 60.977 61.111 0.00 0.00 0.00 3.58
1020 2125 3.370231 TCACTACGCCGCAGCTCA 61.370 61.111 0.00 0.00 36.60 4.26
1389 5087 4.337060 TCTGACGACGCCACCACG 62.337 66.667 0.00 0.00 39.50 4.94
2070 5785 4.427661 AGCTCGCTCGTGCAGGTC 62.428 66.667 16.78 0.00 39.64 3.85
2223 5938 2.110213 TTCGCGTTCAGTGGGCTT 59.890 55.556 5.77 0.00 0.00 4.35
2271 5986 1.620822 ACTTCAACTTCACCATGGGC 58.379 50.000 18.09 0.00 0.00 5.36
2292 6011 5.582665 GGGCAGTTCTTATTAGAAGAGTGTG 59.417 44.000 0.00 0.00 40.95 3.82
2293 6012 6.166982 GGCAGTTCTTATTAGAAGAGTGTGT 58.833 40.000 0.00 0.00 40.95 3.72
2299 6024 6.925211 TCTTATTAGAAGAGTGTGTCACTGG 58.075 40.000 7.14 0.00 45.44 4.00
2353 6078 2.987149 CGTTTGTGCTCGATGTAGACTT 59.013 45.455 0.00 0.00 0.00 3.01
2354 6079 3.428870 CGTTTGTGCTCGATGTAGACTTT 59.571 43.478 0.00 0.00 0.00 2.66
2355 6080 4.664139 CGTTTGTGCTCGATGTAGACTTTG 60.664 45.833 0.00 0.00 0.00 2.77
2356 6081 2.959516 TGTGCTCGATGTAGACTTTGG 58.040 47.619 0.00 0.00 0.00 3.28
2357 6082 2.299013 TGTGCTCGATGTAGACTTTGGT 59.701 45.455 0.00 0.00 0.00 3.67
2358 6083 3.244078 TGTGCTCGATGTAGACTTTGGTT 60.244 43.478 0.00 0.00 0.00 3.67
2359 6084 3.368236 GTGCTCGATGTAGACTTTGGTTC 59.632 47.826 0.00 0.00 0.00 3.62
2371 6096 3.819337 GACTTTGGTTCAAGGGAAGTACC 59.181 47.826 0.00 0.00 32.62 3.34
2391 6116 1.186408 CGTCGTAGTGTTGTGTTCGTG 59.814 52.381 0.00 0.00 0.00 4.35
2424 6149 3.343941 AAGTTTTATGCTAGTGGCGGA 57.656 42.857 0.00 0.00 45.43 5.54
2451 6176 2.034432 CACATGTGGTGCTTGTGCTTTA 59.966 45.455 18.51 0.00 43.23 1.85
2452 6177 2.294233 ACATGTGGTGCTTGTGCTTTAG 59.706 45.455 0.00 0.00 40.48 1.85
2453 6178 2.051334 TGTGGTGCTTGTGCTTTAGT 57.949 45.000 0.00 0.00 40.48 2.24
2454 6179 1.946768 TGTGGTGCTTGTGCTTTAGTC 59.053 47.619 0.00 0.00 40.48 2.59
2455 6180 1.069906 GTGGTGCTTGTGCTTTAGTCG 60.070 52.381 0.00 0.00 40.48 4.18
2456 6181 1.226746 GGTGCTTGTGCTTTAGTCGT 58.773 50.000 0.00 0.00 40.48 4.34
2457 6182 1.069906 GGTGCTTGTGCTTTAGTCGTG 60.070 52.381 0.00 0.00 40.48 4.35
2458 6183 1.069906 GTGCTTGTGCTTTAGTCGTGG 60.070 52.381 0.00 0.00 40.48 4.94
2459 6184 1.226746 GCTTGTGCTTTAGTCGTGGT 58.773 50.000 0.00 0.00 36.03 4.16
2463 6188 0.237498 GTGCTTTAGTCGTGGTTGGC 59.763 55.000 0.00 0.00 0.00 4.52
2480 6205 0.107361 GGCCGTGTTATGCCCTAACT 60.107 55.000 0.00 0.00 41.97 2.24
2487 6212 5.394443 CCGTGTTATGCCCTAACTAGTGTTA 60.394 44.000 0.00 0.00 40.40 2.41
2488 6213 5.517770 CGTGTTATGCCCTAACTAGTGTTAC 59.482 44.000 0.00 0.00 40.40 2.50
2489 6214 6.626623 CGTGTTATGCCCTAACTAGTGTTACT 60.627 42.308 0.00 0.00 40.40 2.24
2490 6215 7.415541 CGTGTTATGCCCTAACTAGTGTTACTA 60.416 40.741 0.00 0.00 40.40 1.82
2491 6216 8.253113 GTGTTATGCCCTAACTAGTGTTACTAA 58.747 37.037 0.00 0.00 40.40 2.24
2492 6217 8.253113 TGTTATGCCCTAACTAGTGTTACTAAC 58.747 37.037 0.00 0.83 40.40 2.34
2494 6219 6.923199 TGCCCTAACTAGTGTTACTAACTT 57.077 37.500 0.00 0.00 37.59 2.66
2495 6220 6.694447 TGCCCTAACTAGTGTTACTAACTTG 58.306 40.000 0.00 0.00 37.59 3.16
2496 6221 6.268387 TGCCCTAACTAGTGTTACTAACTTGT 59.732 38.462 0.00 0.00 37.59 3.16
2497 6222 6.589139 GCCCTAACTAGTGTTACTAACTTGTG 59.411 42.308 0.00 0.00 34.53 3.33
2498 6223 7.664758 CCCTAACTAGTGTTACTAACTTGTGT 58.335 38.462 0.00 0.00 34.53 3.72
2499 6224 7.811713 CCCTAACTAGTGTTACTAACTTGTGTC 59.188 40.741 0.00 0.00 34.53 3.67
2500 6225 7.811713 CCTAACTAGTGTTACTAACTTGTGTCC 59.188 40.741 0.00 0.00 34.53 4.02
2504 6229 5.997843 AGTGTTACTAACTTGTGTCCCTTT 58.002 37.500 0.71 0.00 0.00 3.11
2512 6237 2.168313 ACTTGTGTCCCTTTTGCTTTGG 59.832 45.455 0.00 0.00 0.00 3.28
2530 6261 1.856920 TGGTCCCTTCTTCAACCCTTT 59.143 47.619 0.00 0.00 0.00 3.11
2536 6267 4.414182 TCCCTTCTTCAACCCTTTCACTTA 59.586 41.667 0.00 0.00 0.00 2.24
2537 6268 4.762251 CCCTTCTTCAACCCTTTCACTTAG 59.238 45.833 0.00 0.00 0.00 2.18
2538 6269 5.377478 CCTTCTTCAACCCTTTCACTTAGT 58.623 41.667 0.00 0.00 0.00 2.24
2539 6270 6.465321 CCCTTCTTCAACCCTTTCACTTAGTA 60.465 42.308 0.00 0.00 0.00 1.82
2545 6276 9.503399 CTTCAACCCTTTCACTTAGTATAGTTT 57.497 33.333 0.00 0.00 0.00 2.66
2566 6298 8.678593 AGTTTTTCTAGGGTTCTTTCAGTTAG 57.321 34.615 0.00 0.00 0.00 2.34
2580 6312 1.470098 CAGTTAGCCAGTCACCAATGC 59.530 52.381 0.00 0.00 0.00 3.56
2581 6313 1.352352 AGTTAGCCAGTCACCAATGCT 59.648 47.619 0.00 0.00 36.11 3.79
2582 6314 2.162681 GTTAGCCAGTCACCAATGCTT 58.837 47.619 0.00 0.00 33.63 3.91
2583 6315 3.009033 AGTTAGCCAGTCACCAATGCTTA 59.991 43.478 0.00 0.00 33.63 3.09
2594 6326 1.952296 CCAATGCTTAGGCTGGTGATC 59.048 52.381 0.00 0.00 39.59 2.92
2596 6328 0.475906 ATGCTTAGGCTGGTGATCCC 59.524 55.000 0.00 0.00 39.59 3.85
2605 6337 1.486211 CTGGTGATCCCTAGGTCGTT 58.514 55.000 8.29 0.00 0.00 3.85
2610 6342 3.181478 GGTGATCCCTAGGTCGTTTACAG 60.181 52.174 8.29 0.00 0.00 2.74
2616 6348 4.102996 TCCCTAGGTCGTTTACAGGTTTTT 59.897 41.667 8.29 0.00 0.00 1.94
2621 6353 4.763279 AGGTCGTTTACAGGTTTTTATGGG 59.237 41.667 0.00 0.00 0.00 4.00
2624 6358 5.916320 GTCGTTTACAGGTTTTTATGGGTTG 59.084 40.000 0.00 0.00 0.00 3.77
2650 6384 2.228059 TGTTTGGCCATGCATTTTTGG 58.772 42.857 6.09 0.00 36.03 3.28
2651 6385 2.228925 GTTTGGCCATGCATTTTTGGT 58.771 42.857 6.09 0.00 35.34 3.67
2652 6386 2.622470 GTTTGGCCATGCATTTTTGGTT 59.378 40.909 6.09 0.00 35.34 3.67
2653 6387 3.777106 TTGGCCATGCATTTTTGGTTA 57.223 38.095 6.09 0.00 35.34 2.85
2654 6388 3.996921 TGGCCATGCATTTTTGGTTAT 57.003 38.095 0.00 0.00 35.34 1.89
2655 6389 3.871485 TGGCCATGCATTTTTGGTTATC 58.129 40.909 0.00 0.00 35.34 1.75
2656 6390 3.518705 TGGCCATGCATTTTTGGTTATCT 59.481 39.130 0.00 0.00 35.34 1.98
2657 6391 4.019501 TGGCCATGCATTTTTGGTTATCTT 60.020 37.500 0.00 0.00 35.34 2.40
2658 6392 4.571984 GGCCATGCATTTTTGGTTATCTTC 59.428 41.667 0.00 0.00 35.34 2.87
2659 6393 5.422145 GCCATGCATTTTTGGTTATCTTCT 58.578 37.500 0.00 0.00 35.34 2.85
2660 6394 6.406849 GGCCATGCATTTTTGGTTATCTTCTA 60.407 38.462 0.00 0.00 35.34 2.10
2661 6395 7.212274 GCCATGCATTTTTGGTTATCTTCTAT 58.788 34.615 0.00 0.00 35.34 1.98
2662 6396 7.383300 GCCATGCATTTTTGGTTATCTTCTATC 59.617 37.037 0.00 0.00 35.34 2.08
2663 6397 8.636213 CCATGCATTTTTGGTTATCTTCTATCT 58.364 33.333 0.00 0.00 0.00 1.98
2674 6408 9.434275 TGGTTATCTTCTATCTTAACTGGATGA 57.566 33.333 0.00 0.00 0.00 2.92
2680 6414 8.861086 TCTTCTATCTTAACTGGATGATACACC 58.139 37.037 0.00 0.00 0.00 4.16
2681 6415 7.215719 TCTATCTTAACTGGATGATACACCG 57.784 40.000 0.00 0.00 0.00 4.94
2682 6416 4.054780 TCTTAACTGGATGATACACCGC 57.945 45.455 0.00 0.00 0.00 5.68
2683 6417 3.449377 TCTTAACTGGATGATACACCGCA 59.551 43.478 0.00 0.00 0.00 5.69
2684 6418 2.024176 AACTGGATGATACACCGCAC 57.976 50.000 0.00 0.00 0.00 5.34
2685 6419 0.179111 ACTGGATGATACACCGCACG 60.179 55.000 0.00 0.00 0.00 5.34
2686 6420 0.179111 CTGGATGATACACCGCACGT 60.179 55.000 0.00 0.00 0.00 4.49
2687 6421 0.248012 TGGATGATACACCGCACGTT 59.752 50.000 0.00 0.00 0.00 3.99
2688 6422 0.650512 GGATGATACACCGCACGTTG 59.349 55.000 0.00 0.00 0.00 4.10
2689 6423 0.026285 GATGATACACCGCACGTTGC 59.974 55.000 0.00 0.00 40.69 4.17
2690 6424 0.391130 ATGATACACCGCACGTTGCT 60.391 50.000 8.07 0.00 42.25 3.91
2691 6425 0.244178 TGATACACCGCACGTTGCTA 59.756 50.000 8.07 0.00 42.25 3.49
2692 6426 1.336980 TGATACACCGCACGTTGCTAA 60.337 47.619 8.07 0.00 42.25 3.09
2693 6427 1.323534 GATACACCGCACGTTGCTAAG 59.676 52.381 8.07 0.00 42.25 2.18
2694 6428 0.668096 TACACCGCACGTTGCTAAGG 60.668 55.000 8.07 5.12 42.25 2.69
2695 6429 2.358247 ACCGCACGTTGCTAAGGG 60.358 61.111 8.07 4.84 42.25 3.95
2696 6430 2.047655 CCGCACGTTGCTAAGGGA 60.048 61.111 8.07 0.00 42.25 4.20
2697 6431 2.100631 CCGCACGTTGCTAAGGGAG 61.101 63.158 8.07 0.00 42.25 4.30
2698 6432 1.374252 CGCACGTTGCTAAGGGAGT 60.374 57.895 8.07 0.00 42.25 3.85
2699 6433 0.949105 CGCACGTTGCTAAGGGAGTT 60.949 55.000 8.07 0.00 42.25 3.01
2700 6434 1.670674 CGCACGTTGCTAAGGGAGTTA 60.671 52.381 8.07 0.00 42.25 2.24
2701 6435 2.000447 GCACGTTGCTAAGGGAGTTAG 59.000 52.381 0.00 0.00 40.96 2.34
2702 6436 2.612221 GCACGTTGCTAAGGGAGTTAGT 60.612 50.000 0.00 0.00 40.96 2.24
2703 6437 3.660865 CACGTTGCTAAGGGAGTTAGTT 58.339 45.455 0.00 0.00 40.47 2.24
2704 6438 3.432252 CACGTTGCTAAGGGAGTTAGTTG 59.568 47.826 0.00 0.00 40.47 3.16
2705 6439 2.415512 CGTTGCTAAGGGAGTTAGTTGC 59.584 50.000 0.00 0.00 40.47 4.17
2706 6440 2.380084 TGCTAAGGGAGTTAGTTGCG 57.620 50.000 0.00 0.00 40.47 4.85
2707 6441 1.066430 TGCTAAGGGAGTTAGTTGCGG 60.066 52.381 0.00 0.00 40.47 5.69
2708 6442 1.066358 GCTAAGGGAGTTAGTTGCGGT 60.066 52.381 0.00 0.00 40.47 5.68
2709 6443 2.167075 GCTAAGGGAGTTAGTTGCGGTA 59.833 50.000 0.00 0.00 40.47 4.02
2710 6444 3.181468 GCTAAGGGAGTTAGTTGCGGTAT 60.181 47.826 0.00 0.00 40.47 2.73
2711 6445 4.038402 GCTAAGGGAGTTAGTTGCGGTATA 59.962 45.833 0.00 0.00 40.47 1.47
2712 6446 5.279356 GCTAAGGGAGTTAGTTGCGGTATAT 60.279 44.000 0.00 0.00 40.47 0.86
2713 6447 5.625568 AAGGGAGTTAGTTGCGGTATATT 57.374 39.130 0.00 0.00 0.00 1.28
2714 6448 5.625568 AGGGAGTTAGTTGCGGTATATTT 57.374 39.130 0.00 0.00 0.00 1.40
2715 6449 5.608449 AGGGAGTTAGTTGCGGTATATTTC 58.392 41.667 0.00 0.00 0.00 2.17
2716 6450 5.129815 AGGGAGTTAGTTGCGGTATATTTCA 59.870 40.000 0.00 0.00 0.00 2.69
2717 6451 5.818857 GGGAGTTAGTTGCGGTATATTTCAA 59.181 40.000 0.00 0.00 0.00 2.69
2718 6452 6.485648 GGGAGTTAGTTGCGGTATATTTCAAT 59.514 38.462 0.00 0.00 0.00 2.57
2719 6453 7.352739 GGAGTTAGTTGCGGTATATTTCAATG 58.647 38.462 0.00 0.00 0.00 2.82
2720 6454 7.225931 GGAGTTAGTTGCGGTATATTTCAATGA 59.774 37.037 0.00 0.00 0.00 2.57
2721 6455 8.500753 AGTTAGTTGCGGTATATTTCAATGAA 57.499 30.769 0.00 0.00 0.00 2.57
2722 6456 9.120538 AGTTAGTTGCGGTATATTTCAATGAAT 57.879 29.630 0.00 0.00 0.00 2.57
2723 6457 9.730420 GTTAGTTGCGGTATATTTCAATGAATT 57.270 29.630 0.00 0.00 0.00 2.17
2863 6597 2.889617 CATGGCTGCATGTGGTGG 59.110 61.111 0.50 0.00 0.00 4.61
2864 6598 1.980232 CATGGCTGCATGTGGTGGT 60.980 57.895 0.50 0.00 0.00 4.16
2865 6599 1.980232 ATGGCTGCATGTGGTGGTG 60.980 57.895 0.50 0.00 0.00 4.17
2866 6600 2.282391 GGCTGCATGTGGTGGTGA 60.282 61.111 0.50 0.00 0.00 4.02
2867 6601 2.338015 GGCTGCATGTGGTGGTGAG 61.338 63.158 0.50 0.00 0.00 3.51
2868 6602 1.601759 GCTGCATGTGGTGGTGAGT 60.602 57.895 0.00 0.00 0.00 3.41
2869 6603 1.174712 GCTGCATGTGGTGGTGAGTT 61.175 55.000 0.00 0.00 0.00 3.01
2870 6604 0.877071 CTGCATGTGGTGGTGAGTTC 59.123 55.000 0.00 0.00 0.00 3.01
2871 6605 0.473755 TGCATGTGGTGGTGAGTTCT 59.526 50.000 0.00 0.00 0.00 3.01
2872 6606 1.133823 TGCATGTGGTGGTGAGTTCTT 60.134 47.619 0.00 0.00 0.00 2.52
2873 6607 1.956477 GCATGTGGTGGTGAGTTCTTT 59.044 47.619 0.00 0.00 0.00 2.52
2874 6608 2.362077 GCATGTGGTGGTGAGTTCTTTT 59.638 45.455 0.00 0.00 0.00 2.27
2875 6609 3.550842 GCATGTGGTGGTGAGTTCTTTTC 60.551 47.826 0.00 0.00 0.00 2.29
2876 6610 2.650322 TGTGGTGGTGAGTTCTTTTCC 58.350 47.619 0.00 0.00 0.00 3.13
2877 6611 2.025793 TGTGGTGGTGAGTTCTTTTCCA 60.026 45.455 0.00 0.00 0.00 3.53
2878 6612 3.020984 GTGGTGGTGAGTTCTTTTCCAA 58.979 45.455 0.00 0.00 0.00 3.53
2879 6613 3.636764 GTGGTGGTGAGTTCTTTTCCAAT 59.363 43.478 0.00 0.00 0.00 3.16
2880 6614 3.636300 TGGTGGTGAGTTCTTTTCCAATG 59.364 43.478 0.00 0.00 0.00 2.82
2881 6615 3.552890 GGTGGTGAGTTCTTTTCCAATGC 60.553 47.826 0.00 0.00 0.00 3.56
2882 6616 3.068024 GTGGTGAGTTCTTTTCCAATGCA 59.932 43.478 0.00 0.00 0.00 3.96
2883 6617 3.896888 TGGTGAGTTCTTTTCCAATGCAT 59.103 39.130 0.00 0.00 0.00 3.96
2884 6618 4.240096 GGTGAGTTCTTTTCCAATGCATG 58.760 43.478 0.00 0.00 0.00 4.06
2901 6635 3.235157 CATGGTTGCATGTTAAGGTGG 57.765 47.619 0.00 0.00 0.00 4.61
2902 6636 2.666272 TGGTTGCATGTTAAGGTGGA 57.334 45.000 0.00 0.00 0.00 4.02
2903 6637 2.235016 TGGTTGCATGTTAAGGTGGAC 58.765 47.619 0.00 0.00 0.00 4.02
2904 6638 1.544246 GGTTGCATGTTAAGGTGGACC 59.456 52.381 0.00 0.00 0.00 4.46
2914 6648 3.022897 AGGTGGACCTTACCCCATC 57.977 57.895 0.00 0.00 46.09 3.51
2915 6649 0.623617 AGGTGGACCTTACCCCATCC 60.624 60.000 0.00 0.00 46.09 3.51
2916 6650 0.917333 GGTGGACCTTACCCCATCCA 60.917 60.000 0.00 0.00 38.94 3.41
2917 6651 1.222567 GTGGACCTTACCCCATCCAT 58.777 55.000 0.00 0.00 43.02 3.41
2918 6652 2.414612 GTGGACCTTACCCCATCCATA 58.585 52.381 0.00 0.00 43.02 2.74
2919 6653 2.781174 GTGGACCTTACCCCATCCATAA 59.219 50.000 0.00 0.00 43.02 1.90
2920 6654 3.397955 GTGGACCTTACCCCATCCATAAT 59.602 47.826 0.00 0.00 43.02 1.28
2921 6655 4.058731 TGGACCTTACCCCATCCATAATT 58.941 43.478 0.00 0.00 36.30 1.40
2922 6656 5.073965 GTGGACCTTACCCCATCCATAATTA 59.926 44.000 0.00 0.00 43.02 1.40
2923 6657 5.677276 TGGACCTTACCCCATCCATAATTAA 59.323 40.000 0.00 0.00 36.30 1.40
2924 6658 6.162420 TGGACCTTACCCCATCCATAATTAAA 59.838 38.462 0.00 0.00 36.30 1.52
2925 6659 7.146851 TGGACCTTACCCCATCCATAATTAAAT 60.147 37.037 0.00 0.00 36.30 1.40
2926 6660 7.178451 GGACCTTACCCCATCCATAATTAAATG 59.822 40.741 0.00 0.00 0.00 2.32
2927 6661 7.831955 ACCTTACCCCATCCATAATTAAATGA 58.168 34.615 7.19 0.00 0.00 2.57
2928 6662 8.464322 ACCTTACCCCATCCATAATTAAATGAT 58.536 33.333 7.19 0.18 0.00 2.45
2929 6663 9.989296 CCTTACCCCATCCATAATTAAATGATA 57.011 33.333 7.19 0.00 0.00 2.15
2933 6667 9.842196 ACCCCATCCATAATTAAATGATAATGT 57.158 29.630 7.19 0.00 0.00 2.71
2948 6682 7.812690 ATGATAATGTGACATACTTGCATGT 57.187 32.000 10.40 10.40 41.83 3.21
2949 6683 7.628769 TGATAATGTGACATACTTGCATGTT 57.371 32.000 10.85 0.00 39.25 2.71
2950 6684 8.054152 TGATAATGTGACATACTTGCATGTTT 57.946 30.769 10.85 0.00 39.25 2.83
2951 6685 9.171877 TGATAATGTGACATACTTGCATGTTTA 57.828 29.630 10.85 1.67 39.25 2.01
2952 6686 9.655769 GATAATGTGACATACTTGCATGTTTAG 57.344 33.333 10.85 4.21 39.25 1.85
2953 6687 7.686438 AATGTGACATACTTGCATGTTTAGA 57.314 32.000 10.85 0.00 39.25 2.10
2954 6688 7.870509 ATGTGACATACTTGCATGTTTAGAT 57.129 32.000 10.85 0.00 39.25 1.98
2955 6689 8.962884 ATGTGACATACTTGCATGTTTAGATA 57.037 30.769 10.85 0.00 39.25 1.98
2956 6690 8.785329 TGTGACATACTTGCATGTTTAGATAA 57.215 30.769 10.85 0.00 39.25 1.75
2957 6691 9.225436 TGTGACATACTTGCATGTTTAGATAAA 57.775 29.630 10.85 0.00 39.25 1.40
2977 6711 9.440761 AGATAAATAAGTTAGTGGGATGACTCT 57.559 33.333 0.00 0.00 0.00 3.24
2982 6716 9.892130 AATAAGTTAGTGGGATGACTCTTTTAG 57.108 33.333 0.00 0.00 0.00 1.85
2983 6717 6.301169 AGTTAGTGGGATGACTCTTTTAGG 57.699 41.667 0.00 0.00 0.00 2.69
2984 6718 5.785940 AGTTAGTGGGATGACTCTTTTAGGT 59.214 40.000 0.00 0.00 0.00 3.08
2985 6719 6.958192 AGTTAGTGGGATGACTCTTTTAGGTA 59.042 38.462 0.00 0.00 0.00 3.08
2986 6720 7.624077 AGTTAGTGGGATGACTCTTTTAGGTAT 59.376 37.037 0.00 0.00 0.00 2.73
2987 6721 6.487299 AGTGGGATGACTCTTTTAGGTATC 57.513 41.667 0.00 0.00 0.00 2.24
2988 6722 6.206042 AGTGGGATGACTCTTTTAGGTATCT 58.794 40.000 0.00 0.00 0.00 1.98
2989 6723 7.363031 AGTGGGATGACTCTTTTAGGTATCTA 58.637 38.462 0.00 0.00 0.00 1.98
2990 6724 7.507616 AGTGGGATGACTCTTTTAGGTATCTAG 59.492 40.741 0.00 0.00 0.00 2.43
2991 6725 7.506261 GTGGGATGACTCTTTTAGGTATCTAGA 59.494 40.741 0.00 0.00 0.00 2.43
2992 6726 8.065627 TGGGATGACTCTTTTAGGTATCTAGAA 58.934 37.037 0.00 0.00 0.00 2.10
2993 6727 9.095700 GGGATGACTCTTTTAGGTATCTAGAAT 57.904 37.037 0.00 0.00 0.00 2.40
3011 6745 8.121305 TCTAGAATTAGCAAAAGAAAATGGCA 57.879 30.769 0.00 0.00 0.00 4.92
3012 6746 8.752187 TCTAGAATTAGCAAAAGAAAATGGCAT 58.248 29.630 0.00 0.00 0.00 4.40
3013 6747 7.605410 AGAATTAGCAAAAGAAAATGGCATG 57.395 32.000 0.00 0.00 0.00 4.06
3014 6748 7.388437 AGAATTAGCAAAAGAAAATGGCATGA 58.612 30.769 0.00 0.00 0.00 3.07
3015 6749 8.044908 AGAATTAGCAAAAGAAAATGGCATGAT 58.955 29.630 0.00 0.00 0.00 2.45
3016 6750 8.570068 AATTAGCAAAAGAAAATGGCATGATT 57.430 26.923 0.00 0.00 0.00 2.57
3017 6751 7.982761 TTAGCAAAAGAAAATGGCATGATTT 57.017 28.000 0.00 0.00 0.00 2.17
3018 6752 9.669887 ATTAGCAAAAGAAAATGGCATGATTTA 57.330 25.926 0.00 0.00 0.00 1.40
3019 6753 7.605410 AGCAAAAGAAAATGGCATGATTTAG 57.395 32.000 0.00 0.00 0.00 1.85
3020 6754 7.388437 AGCAAAAGAAAATGGCATGATTTAGA 58.612 30.769 0.00 0.00 0.00 2.10
3021 6755 7.879160 AGCAAAAGAAAATGGCATGATTTAGAA 59.121 29.630 0.00 0.00 0.00 2.10
3022 6756 8.173130 GCAAAAGAAAATGGCATGATTTAGAAG 58.827 33.333 0.00 0.00 0.00 2.85
3023 6757 8.662141 CAAAAGAAAATGGCATGATTTAGAAGG 58.338 33.333 0.00 0.00 0.00 3.46
3024 6758 7.722949 AAGAAAATGGCATGATTTAGAAGGA 57.277 32.000 0.00 0.00 0.00 3.36
3025 6759 7.344095 AGAAAATGGCATGATTTAGAAGGAG 57.656 36.000 0.00 0.00 0.00 3.69
3026 6760 7.121382 AGAAAATGGCATGATTTAGAAGGAGA 58.879 34.615 0.00 0.00 0.00 3.71
3027 6761 7.616935 AGAAAATGGCATGATTTAGAAGGAGAA 59.383 33.333 0.00 0.00 0.00 2.87
3028 6762 7.722949 AAATGGCATGATTTAGAAGGAGAAA 57.277 32.000 0.00 0.00 0.00 2.52
3029 6763 7.909485 AATGGCATGATTTAGAAGGAGAAAT 57.091 32.000 0.00 0.00 0.00 2.17
3030 6764 6.704289 TGGCATGATTTAGAAGGAGAAATG 57.296 37.500 0.00 0.00 0.00 2.32
3031 6765 5.595542 TGGCATGATTTAGAAGGAGAAATGG 59.404 40.000 0.00 0.00 0.00 3.16
3032 6766 5.595952 GGCATGATTTAGAAGGAGAAATGGT 59.404 40.000 0.00 0.00 0.00 3.55
3033 6767 6.460676 GGCATGATTTAGAAGGAGAAATGGTG 60.461 42.308 0.00 0.00 0.00 4.17
3034 6768 6.501781 CATGATTTAGAAGGAGAAATGGTGC 58.498 40.000 0.00 0.00 0.00 5.01
3035 6769 4.949856 TGATTTAGAAGGAGAAATGGTGCC 59.050 41.667 0.00 0.00 0.00 5.01
3036 6770 4.380843 TTTAGAAGGAGAAATGGTGCCA 57.619 40.909 0.00 0.00 0.00 4.92
3037 6771 2.978156 AGAAGGAGAAATGGTGCCAA 57.022 45.000 0.00 0.00 0.00 4.52
3038 6772 3.243359 AGAAGGAGAAATGGTGCCAAA 57.757 42.857 0.00 0.00 0.00 3.28
3039 6773 3.575805 AGAAGGAGAAATGGTGCCAAAA 58.424 40.909 0.00 0.00 0.00 2.44
3040 6774 4.162651 AGAAGGAGAAATGGTGCCAAAAT 58.837 39.130 0.00 0.00 0.00 1.82
3041 6775 5.332743 AGAAGGAGAAATGGTGCCAAAATA 58.667 37.500 0.00 0.00 0.00 1.40
3042 6776 5.960202 AGAAGGAGAAATGGTGCCAAAATAT 59.040 36.000 0.00 0.00 0.00 1.28
3043 6777 6.441604 AGAAGGAGAAATGGTGCCAAAATATT 59.558 34.615 0.00 0.00 0.00 1.28
3044 6778 6.625532 AGGAGAAATGGTGCCAAAATATTT 57.374 33.333 0.00 0.00 0.00 1.40
3045 6779 7.019656 AGGAGAAATGGTGCCAAAATATTTT 57.980 32.000 7.64 7.64 0.00 1.82
3046 6780 7.460910 AGGAGAAATGGTGCCAAAATATTTTT 58.539 30.769 10.77 0.00 0.00 1.94
3069 6803 8.775220 TTTTGAACATAATACAAACACAGACG 57.225 30.769 0.00 0.00 34.09 4.18
3070 6804 5.922546 TGAACATAATACAAACACAGACGC 58.077 37.500 0.00 0.00 0.00 5.19
3071 6805 5.699001 TGAACATAATACAAACACAGACGCT 59.301 36.000 0.00 0.00 0.00 5.07
3072 6806 5.779806 ACATAATACAAACACAGACGCTC 57.220 39.130 0.00 0.00 0.00 5.03
3073 6807 5.234752 ACATAATACAAACACAGACGCTCA 58.765 37.500 0.00 0.00 0.00 4.26
3074 6808 5.348724 ACATAATACAAACACAGACGCTCAG 59.651 40.000 0.00 0.00 0.00 3.35
3075 6809 3.660501 ATACAAACACAGACGCTCAGA 57.339 42.857 0.00 0.00 0.00 3.27
3076 6810 2.309528 ACAAACACAGACGCTCAGAA 57.690 45.000 0.00 0.00 0.00 3.02
3077 6811 2.627945 ACAAACACAGACGCTCAGAAA 58.372 42.857 0.00 0.00 0.00 2.52
3078 6812 3.206150 ACAAACACAGACGCTCAGAAAT 58.794 40.909 0.00 0.00 0.00 2.17
3079 6813 4.377021 ACAAACACAGACGCTCAGAAATA 58.623 39.130 0.00 0.00 0.00 1.40
3080 6814 4.211374 ACAAACACAGACGCTCAGAAATAC 59.789 41.667 0.00 0.00 0.00 1.89
3081 6815 2.596452 ACACAGACGCTCAGAAATACG 58.404 47.619 0.00 0.00 0.00 3.06
3082 6816 1.321743 CACAGACGCTCAGAAATACGC 59.678 52.381 0.00 0.00 0.00 4.42
3083 6817 1.067846 ACAGACGCTCAGAAATACGCA 60.068 47.619 0.00 0.00 0.00 5.24
3084 6818 1.321743 CAGACGCTCAGAAATACGCAC 59.678 52.381 0.00 0.00 0.00 5.34
3085 6819 1.067846 AGACGCTCAGAAATACGCACA 60.068 47.619 0.00 0.00 0.00 4.57
3086 6820 1.927174 GACGCTCAGAAATACGCACAT 59.073 47.619 0.00 0.00 0.00 3.21
3087 6821 3.113322 GACGCTCAGAAATACGCACATA 58.887 45.455 0.00 0.00 0.00 2.29
3088 6822 2.858344 ACGCTCAGAAATACGCACATAC 59.142 45.455 0.00 0.00 0.00 2.39
3089 6823 2.857748 CGCTCAGAAATACGCACATACA 59.142 45.455 0.00 0.00 0.00 2.29
3090 6824 3.301835 CGCTCAGAAATACGCACATACAC 60.302 47.826 0.00 0.00 0.00 2.90
3091 6825 3.865745 GCTCAGAAATACGCACATACACT 59.134 43.478 0.00 0.00 0.00 3.55
3092 6826 4.026475 GCTCAGAAATACGCACATACACTC 60.026 45.833 0.00 0.00 0.00 3.51
3093 6827 5.066968 TCAGAAATACGCACATACACTCA 57.933 39.130 0.00 0.00 0.00 3.41
3094 6828 4.862574 TCAGAAATACGCACATACACTCAC 59.137 41.667 0.00 0.00 0.00 3.51
3095 6829 4.032900 CAGAAATACGCACATACACTCACC 59.967 45.833 0.00 0.00 0.00 4.02
3096 6830 3.887621 AATACGCACATACACTCACCT 57.112 42.857 0.00 0.00 0.00 4.00
3097 6831 2.933495 TACGCACATACACTCACCTC 57.067 50.000 0.00 0.00 0.00 3.85
3098 6832 1.257743 ACGCACATACACTCACCTCT 58.742 50.000 0.00 0.00 0.00 3.69
3099 6833 2.443416 ACGCACATACACTCACCTCTA 58.557 47.619 0.00 0.00 0.00 2.43
3100 6834 3.024547 ACGCACATACACTCACCTCTAT 58.975 45.455 0.00 0.00 0.00 1.98
3101 6835 3.181486 ACGCACATACACTCACCTCTATG 60.181 47.826 0.00 0.00 0.00 2.23
3102 6836 3.066760 CGCACATACACTCACCTCTATGA 59.933 47.826 0.00 0.00 0.00 2.15
3103 6837 4.440112 CGCACATACACTCACCTCTATGAA 60.440 45.833 0.00 0.00 0.00 2.57
3104 6838 4.806247 GCACATACACTCACCTCTATGAAC 59.194 45.833 0.00 0.00 0.00 3.18
3105 6839 5.037385 CACATACACTCACCTCTATGAACG 58.963 45.833 0.00 0.00 0.00 3.95
3106 6840 2.656560 ACACTCACCTCTATGAACGC 57.343 50.000 0.00 0.00 0.00 4.84
3107 6841 1.893137 ACACTCACCTCTATGAACGCA 59.107 47.619 0.00 0.00 0.00 5.24
3108 6842 2.263077 CACTCACCTCTATGAACGCAC 58.737 52.381 0.00 0.00 0.00 5.34
3109 6843 1.135373 ACTCACCTCTATGAACGCACG 60.135 52.381 0.00 0.00 0.00 5.34
3110 6844 0.457853 TCACCTCTATGAACGCACGC 60.458 55.000 0.00 0.00 0.00 5.34
3111 6845 0.735978 CACCTCTATGAACGCACGCA 60.736 55.000 0.00 0.00 0.00 5.24
3112 6846 0.736325 ACCTCTATGAACGCACGCAC 60.736 55.000 0.00 0.00 0.00 5.34
3113 6847 1.625870 CTCTATGAACGCACGCACG 59.374 57.895 0.00 0.00 39.50 5.34
3114 6848 2.020016 CTATGAACGCACGCACGC 59.980 61.111 0.00 0.00 36.19 5.34
3115 6849 2.725699 CTATGAACGCACGCACGCA 61.726 57.895 0.00 0.00 36.19 5.24
3116 6850 2.863655 CTATGAACGCACGCACGCAC 62.864 60.000 0.00 0.00 36.19 5.34
3123 6857 3.411351 CACGCACGCACACCCTAC 61.411 66.667 0.00 0.00 0.00 3.18
3124 6858 4.675029 ACGCACGCACACCCTACC 62.675 66.667 0.00 0.00 0.00 3.18
3125 6859 4.373116 CGCACGCACACCCTACCT 62.373 66.667 0.00 0.00 0.00 3.08
3126 6860 2.434359 GCACGCACACCCTACCTC 60.434 66.667 0.00 0.00 0.00 3.85
3127 6861 2.943978 GCACGCACACCCTACCTCT 61.944 63.158 0.00 0.00 0.00 3.69
3128 6862 1.601419 GCACGCACACCCTACCTCTA 61.601 60.000 0.00 0.00 0.00 2.43
3129 6863 1.112113 CACGCACACCCTACCTCTAT 58.888 55.000 0.00 0.00 0.00 1.98
3130 6864 1.112113 ACGCACACCCTACCTCTATG 58.888 55.000 0.00 0.00 0.00 2.23
3131 6865 1.341679 ACGCACACCCTACCTCTATGA 60.342 52.381 0.00 0.00 0.00 2.15
3132 6866 1.338337 CGCACACCCTACCTCTATGAG 59.662 57.143 0.00 0.00 0.00 2.90
3133 6867 2.389715 GCACACCCTACCTCTATGAGT 58.610 52.381 0.00 0.00 0.00 3.41
3134 6868 3.563223 GCACACCCTACCTCTATGAGTA 58.437 50.000 0.00 0.00 0.00 2.59
3135 6869 3.318557 GCACACCCTACCTCTATGAGTAC 59.681 52.174 0.00 0.00 0.00 2.73
3136 6870 3.890147 CACACCCTACCTCTATGAGTACC 59.110 52.174 0.00 0.00 0.00 3.34
3137 6871 3.792684 ACACCCTACCTCTATGAGTACCT 59.207 47.826 0.00 0.00 0.00 3.08
3138 6872 4.141205 ACACCCTACCTCTATGAGTACCTC 60.141 50.000 0.00 0.00 0.00 3.85
3139 6873 3.398629 ACCCTACCTCTATGAGTACCTCC 59.601 52.174 0.00 0.00 0.00 4.30
3140 6874 3.398292 CCCTACCTCTATGAGTACCTCCA 59.602 52.174 0.00 0.00 0.00 3.86
3141 6875 4.140994 CCCTACCTCTATGAGTACCTCCAA 60.141 50.000 0.00 0.00 0.00 3.53
3142 6876 5.074115 CCTACCTCTATGAGTACCTCCAAG 58.926 50.000 0.00 0.00 0.00 3.61
3143 6877 4.883021 ACCTCTATGAGTACCTCCAAGA 57.117 45.455 0.00 0.00 0.00 3.02
3144 6878 4.798882 ACCTCTATGAGTACCTCCAAGAG 58.201 47.826 10.65 10.65 37.74 2.85
3145 6879 4.479056 ACCTCTATGAGTACCTCCAAGAGA 59.521 45.833 15.88 7.97 39.03 3.10
3146 6880 4.825085 CCTCTATGAGTACCTCCAAGAGAC 59.175 50.000 15.88 0.00 39.03 3.36
3147 6881 5.398581 CCTCTATGAGTACCTCCAAGAGACT 60.399 48.000 15.88 0.00 39.03 3.24
3148 6882 5.441500 TCTATGAGTACCTCCAAGAGACTG 58.558 45.833 0.00 0.00 0.00 3.51
3149 6883 3.808834 TGAGTACCTCCAAGAGACTGA 57.191 47.619 0.00 0.00 0.00 3.41
3150 6884 3.691575 TGAGTACCTCCAAGAGACTGAG 58.308 50.000 0.00 0.00 0.00 3.35
3151 6885 2.425668 GAGTACCTCCAAGAGACTGAGC 59.574 54.545 0.00 0.00 0.00 4.26
3152 6886 2.042433 AGTACCTCCAAGAGACTGAGCT 59.958 50.000 0.00 0.00 0.00 4.09
3153 6887 1.265236 ACCTCCAAGAGACTGAGCTG 58.735 55.000 0.00 0.00 0.00 4.24
3154 6888 0.536260 CCTCCAAGAGACTGAGCTGG 59.464 60.000 0.00 0.00 0.00 4.85
3155 6889 0.108233 CTCCAAGAGACTGAGCTGGC 60.108 60.000 0.00 0.00 0.00 4.85
3156 6890 0.833409 TCCAAGAGACTGAGCTGGCA 60.833 55.000 0.00 0.00 0.00 4.92
3157 6891 0.252479 CCAAGAGACTGAGCTGGCAT 59.748 55.000 0.00 0.00 0.00 4.40
3158 6892 1.339824 CCAAGAGACTGAGCTGGCATT 60.340 52.381 0.00 0.00 0.00 3.56
3159 6893 2.093288 CCAAGAGACTGAGCTGGCATTA 60.093 50.000 0.00 0.00 0.00 1.90
3160 6894 3.433314 CCAAGAGACTGAGCTGGCATTAT 60.433 47.826 0.00 0.00 0.00 1.28
3161 6895 3.749665 AGAGACTGAGCTGGCATTATC 57.250 47.619 0.00 0.00 0.00 1.75
3162 6896 3.036819 AGAGACTGAGCTGGCATTATCA 58.963 45.455 0.00 0.00 0.00 2.15
3163 6897 3.647113 AGAGACTGAGCTGGCATTATCAT 59.353 43.478 0.00 0.00 0.00 2.45
3164 6898 3.995705 GAGACTGAGCTGGCATTATCATC 59.004 47.826 0.00 0.00 0.00 2.92
3165 6899 3.647113 AGACTGAGCTGGCATTATCATCT 59.353 43.478 0.00 0.00 0.00 2.90
3166 6900 4.102838 AGACTGAGCTGGCATTATCATCTT 59.897 41.667 0.00 0.00 0.00 2.40
3167 6901 4.387598 ACTGAGCTGGCATTATCATCTTC 58.612 43.478 0.00 0.00 0.00 2.87
3168 6902 4.141551 ACTGAGCTGGCATTATCATCTTCA 60.142 41.667 0.00 0.00 0.00 3.02
3169 6903 4.981812 TGAGCTGGCATTATCATCTTCAT 58.018 39.130 0.00 0.00 0.00 2.57
3170 6904 4.760204 TGAGCTGGCATTATCATCTTCATG 59.240 41.667 0.00 0.00 0.00 3.07
3171 6905 4.981812 AGCTGGCATTATCATCTTCATGA 58.018 39.130 0.00 0.00 43.45 3.07
3173 6907 6.010850 AGCTGGCATTATCATCTTCATGATT 58.989 36.000 0.00 0.00 46.07 2.57
3174 6908 7.173032 AGCTGGCATTATCATCTTCATGATTA 58.827 34.615 0.00 0.00 46.07 1.75
3175 6909 7.120873 AGCTGGCATTATCATCTTCATGATTAC 59.879 37.037 0.00 0.00 46.07 1.89
3176 6910 7.368480 TGGCATTATCATCTTCATGATTACG 57.632 36.000 0.00 0.00 46.07 3.18
3177 6911 7.160726 TGGCATTATCATCTTCATGATTACGA 58.839 34.615 0.00 0.00 46.07 3.43
3178 6912 7.661027 TGGCATTATCATCTTCATGATTACGAA 59.339 33.333 0.00 0.00 46.07 3.85
3179 6913 8.173775 GGCATTATCATCTTCATGATTACGAAG 58.826 37.037 0.00 0.00 46.07 3.79
3180 6914 8.715998 GCATTATCATCTTCATGATTACGAAGT 58.284 33.333 0.00 0.00 46.07 3.01
3182 6916 6.999956 ATCATCTTCATGATTACGAAGTCG 57.000 37.500 0.00 0.00 46.07 4.18
3183 6917 4.740205 TCATCTTCATGATTACGAAGTCGC 59.260 41.667 0.00 0.00 39.70 5.19
3184 6918 3.444916 TCTTCATGATTACGAAGTCGCC 58.555 45.455 0.00 0.00 43.93 5.54
3185 6919 2.951457 TCATGATTACGAAGTCGCCA 57.049 45.000 0.00 0.00 43.93 5.69
3186 6920 2.536365 TCATGATTACGAAGTCGCCAC 58.464 47.619 0.00 0.00 43.93 5.01
3187 6921 2.165641 TCATGATTACGAAGTCGCCACT 59.834 45.455 0.00 0.00 43.93 4.00
3188 6922 3.379057 TCATGATTACGAAGTCGCCACTA 59.621 43.478 0.00 0.00 43.93 2.74
3189 6923 3.853831 TGATTACGAAGTCGCCACTAA 57.146 42.857 0.00 0.00 43.93 2.24
3190 6924 3.504863 TGATTACGAAGTCGCCACTAAC 58.495 45.455 0.00 0.00 43.93 2.34
3191 6925 1.967762 TTACGAAGTCGCCACTAACG 58.032 50.000 0.00 8.76 43.93 3.18
3192 6926 0.454957 TACGAAGTCGCCACTAACGC 60.455 55.000 9.86 0.00 43.93 4.84
3193 6927 2.442188 CGAAGTCGCCACTAACGCC 61.442 63.158 0.00 0.00 30.14 5.68
3194 6928 1.080025 GAAGTCGCCACTAACGCCT 60.080 57.895 0.00 0.00 30.14 5.52
3195 6929 0.669625 GAAGTCGCCACTAACGCCTT 60.670 55.000 0.00 0.00 30.14 4.35
3196 6930 0.250166 AAGTCGCCACTAACGCCTTT 60.250 50.000 0.00 0.00 30.14 3.11
3197 6931 0.949105 AGTCGCCACTAACGCCTTTG 60.949 55.000 0.00 0.00 0.00 2.77
3198 6932 1.070105 TCGCCACTAACGCCTTTGT 59.930 52.632 0.00 0.00 0.00 2.83
3199 6933 0.317799 TCGCCACTAACGCCTTTGTA 59.682 50.000 0.00 0.00 0.00 2.41
3200 6934 0.719465 CGCCACTAACGCCTTTGTAG 59.281 55.000 0.00 0.00 0.00 2.74
3201 6935 1.804601 GCCACTAACGCCTTTGTAGT 58.195 50.000 0.00 0.00 0.00 2.73
3202 6936 1.730612 GCCACTAACGCCTTTGTAGTC 59.269 52.381 0.00 0.00 0.00 2.59
3203 6937 1.990563 CCACTAACGCCTTTGTAGTCG 59.009 52.381 0.00 0.00 0.00 4.18
3204 6938 2.352030 CCACTAACGCCTTTGTAGTCGA 60.352 50.000 0.00 0.00 0.00 4.20
3205 6939 2.660236 CACTAACGCCTTTGTAGTCGAC 59.340 50.000 7.70 7.70 0.00 4.20
3206 6940 1.909532 CTAACGCCTTTGTAGTCGACG 59.090 52.381 10.46 0.00 0.00 5.12
3207 6941 0.665369 AACGCCTTTGTAGTCGACGG 60.665 55.000 10.46 5.18 0.00 4.79
3208 6942 1.804326 CGCCTTTGTAGTCGACGGG 60.804 63.158 10.46 7.94 0.00 5.28
3209 6943 1.588082 GCCTTTGTAGTCGACGGGA 59.412 57.895 10.46 0.00 0.00 5.14
3210 6944 0.037975 GCCTTTGTAGTCGACGGGAA 60.038 55.000 10.46 0.87 0.00 3.97
3211 6945 1.706443 CCTTTGTAGTCGACGGGAAC 58.294 55.000 10.46 8.05 0.00 3.62
3225 6959 1.797025 GGGAACGTCTTCTTCCACTG 58.203 55.000 5.63 0.00 39.29 3.66
3226 6960 1.343465 GGGAACGTCTTCTTCCACTGA 59.657 52.381 5.63 0.00 39.29 3.41
3227 6961 2.224209 GGGAACGTCTTCTTCCACTGAA 60.224 50.000 5.63 0.00 39.29 3.02
3228 6962 2.801111 GGAACGTCTTCTTCCACTGAAC 59.199 50.000 0.00 0.00 37.68 3.18
3229 6963 2.135664 ACGTCTTCTTCCACTGAACG 57.864 50.000 0.00 0.00 0.00 3.95
3230 6964 0.784778 CGTCTTCTTCCACTGAACGC 59.215 55.000 0.00 0.00 0.00 4.84
3231 6965 1.865865 GTCTTCTTCCACTGAACGCA 58.134 50.000 0.00 0.00 0.00 5.24
3232 6966 1.527311 GTCTTCTTCCACTGAACGCAC 59.473 52.381 0.00 0.00 0.00 5.34
3233 6967 1.412710 TCTTCTTCCACTGAACGCACT 59.587 47.619 0.00 0.00 0.00 4.40
3234 6968 1.528586 CTTCTTCCACTGAACGCACTG 59.471 52.381 0.00 0.00 0.00 3.66
3235 6969 0.880278 TCTTCCACTGAACGCACTGC 60.880 55.000 0.00 0.00 0.00 4.40
3236 6970 1.153269 TTCCACTGAACGCACTGCA 60.153 52.632 1.11 0.00 0.00 4.41
3237 6971 1.436195 TTCCACTGAACGCACTGCAC 61.436 55.000 1.11 0.00 0.00 4.57
3238 6972 2.179547 CCACTGAACGCACTGCACA 61.180 57.895 1.11 0.00 0.00 4.57
3239 6973 1.509644 CCACTGAACGCACTGCACAT 61.510 55.000 1.11 0.00 0.00 3.21
3240 6974 0.110509 CACTGAACGCACTGCACATC 60.111 55.000 1.11 0.00 0.00 3.06
3241 6975 0.250038 ACTGAACGCACTGCACATCT 60.250 50.000 1.11 0.00 0.00 2.90
3242 6976 1.000843 ACTGAACGCACTGCACATCTA 59.999 47.619 1.11 0.00 0.00 1.98
3243 6977 1.391485 CTGAACGCACTGCACATCTAC 59.609 52.381 1.11 0.00 0.00 2.59
3244 6978 1.270041 TGAACGCACTGCACATCTACA 60.270 47.619 1.11 0.00 0.00 2.74
3245 6979 1.391485 GAACGCACTGCACATCTACAG 59.609 52.381 1.11 0.00 39.86 2.74
3246 6980 0.603065 ACGCACTGCACATCTACAGA 59.397 50.000 1.11 0.00 37.35 3.41
3247 6981 1.000843 ACGCACTGCACATCTACAGAA 59.999 47.619 1.11 0.00 37.35 3.02
3248 6982 1.657594 CGCACTGCACATCTACAGAAG 59.342 52.381 1.11 0.00 37.35 2.85
3249 6983 2.693069 GCACTGCACATCTACAGAAGT 58.307 47.619 0.00 0.00 37.35 3.01
3250 6984 2.670414 GCACTGCACATCTACAGAAGTC 59.330 50.000 0.00 0.00 37.35 3.01
3251 6985 3.257393 CACTGCACATCTACAGAAGTCC 58.743 50.000 0.00 0.00 37.35 3.85
3252 6986 3.056250 CACTGCACATCTACAGAAGTCCT 60.056 47.826 0.00 0.00 37.35 3.85
3254 6988 3.165071 TGCACATCTACAGAAGTCCTGA 58.835 45.455 0.00 0.00 45.78 3.86
3255 6989 3.578282 TGCACATCTACAGAAGTCCTGAA 59.422 43.478 0.00 0.00 45.78 3.02
3256 6990 4.040339 TGCACATCTACAGAAGTCCTGAAA 59.960 41.667 0.00 0.00 45.78 2.69
3257 6991 5.181748 GCACATCTACAGAAGTCCTGAAAT 58.818 41.667 0.00 0.00 45.78 2.17
3258 6992 6.070824 TGCACATCTACAGAAGTCCTGAAATA 60.071 38.462 0.00 0.00 45.78 1.40
3259 6993 6.818644 GCACATCTACAGAAGTCCTGAAATAA 59.181 38.462 0.00 0.00 45.78 1.40
3260 6994 7.497249 GCACATCTACAGAAGTCCTGAAATAAT 59.503 37.037 0.00 0.00 45.78 1.28
3261 6995 9.388506 CACATCTACAGAAGTCCTGAAATAATT 57.611 33.333 0.00 0.00 45.78 1.40
3262 6996 9.965902 ACATCTACAGAAGTCCTGAAATAATTT 57.034 29.630 0.00 0.00 45.78 1.82
3277 7011 9.891535 CTGAAATAATTTTAGAAAAATGCGAGC 57.108 29.630 0.00 0.00 0.00 5.03
3278 7012 9.416794 TGAAATAATTTTAGAAAAATGCGAGCA 57.583 25.926 0.00 0.00 0.00 4.26
3279 7013 9.891535 GAAATAATTTTAGAAAAATGCGAGCAG 57.108 29.630 3.58 0.00 0.00 4.24
3280 7014 8.986477 AATAATTTTAGAAAAATGCGAGCAGT 57.014 26.923 3.58 0.00 0.00 4.40
3282 7016 9.722056 ATAATTTTAGAAAAATGCGAGCAGTAG 57.278 29.630 3.58 0.00 0.00 2.57
3283 7017 6.554334 TTTTAGAAAAATGCGAGCAGTAGT 57.446 33.333 3.58 0.00 0.00 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 0.738389 CTCTCCGTGGCTCTCTTCTC 59.262 60.000 0.00 0.00 0.00 2.87
74 75 1.273552 CCCCAGAACCTCTTCTCCTCT 60.274 57.143 0.00 0.00 34.20 3.69
90 91 0.556888 ACTACTACCCCCTCTCCCCA 60.557 60.000 0.00 0.00 0.00 4.96
103 104 0.752009 CTCCTCCGCTGCCACTACTA 60.752 60.000 0.00 0.00 0.00 1.82
135 136 0.959372 TCTCCTTCCACCTCGTCGTC 60.959 60.000 0.00 0.00 0.00 4.20
136 137 0.538977 TTCTCCTTCCACCTCGTCGT 60.539 55.000 0.00 0.00 0.00 4.34
204 205 1.544093 CCTGCCTCTCTTCTTGCACAA 60.544 52.381 0.00 0.00 0.00 3.33
209 210 1.481772 CTCCTCCTGCCTCTCTTCTTG 59.518 57.143 0.00 0.00 0.00 3.02
277 280 7.908601 ACGTAAGAAAACTGATTGTTTGACTTC 59.091 33.333 12.95 2.00 44.28 3.01
278 281 7.696453 CACGTAAGAAAACTGATTGTTTGACTT 59.304 33.333 13.60 13.60 44.28 3.01
307 322 2.680805 CGTGATTATGACAGTTGGGGCT 60.681 50.000 0.00 0.00 0.00 5.19
408 435 8.142485 ACTACTACAATTCAAGCTAGGGTTTA 57.858 34.615 0.00 0.00 0.00 2.01
543 1031 0.606673 GTGCTTGAGACTTGTCCCCC 60.607 60.000 0.00 0.00 0.00 5.40
648 1608 2.025418 CGTGCGTTTTACGGAGCCT 61.025 57.895 1.14 0.00 44.00 4.58
653 1617 1.489824 CACCTCGTGCGTTTTACGG 59.510 57.895 1.14 0.00 42.82 4.02
993 2098 2.452813 GCGTAGTGACATGGCACGG 61.453 63.158 25.70 19.10 43.42 4.94
1005 2110 4.803426 GCTGAGCTGCGGCGTAGT 62.803 66.667 25.23 12.70 44.37 2.73
1090 2216 4.114997 CGCCACGATTGGTTGGCC 62.115 66.667 8.62 0.00 45.98 5.36
1091 2217 4.776647 GCGCCACGATTGGTTGGC 62.777 66.667 0.00 4.75 45.98 4.52
1113 2239 2.435059 GTGGAGGCGTCCTTGCTC 60.435 66.667 24.96 7.90 44.30 4.26
1389 5087 3.757248 ATTGGCGGCGAGGGTGATC 62.757 63.158 12.98 0.00 0.00 2.92
1419 5117 2.050350 CGGGTAGAGCGGGTTCTGA 61.050 63.158 0.00 0.00 0.00 3.27
1470 5168 2.366570 GACTCCAGGAGCTCCCCT 59.633 66.667 29.54 9.19 36.90 4.79
1518 5216 1.142748 CAGCGGTAGCCTTGAGAGG 59.857 63.158 0.00 0.00 46.67 3.69
1948 5663 2.125512 GGACGCCTGGTAGCACAG 60.126 66.667 0.00 0.00 38.21 3.66
2070 5785 1.297304 GCACACGGTGTTGTCGTTG 60.297 57.895 11.82 0.00 38.94 4.10
2271 5986 8.085296 AGTGACACACTCTTCTAATAAGAACTG 58.915 37.037 8.59 0.00 41.21 3.16
2292 6011 0.315568 AGACTCGCAAGACCAGTGAC 59.684 55.000 0.00 0.00 45.01 3.67
2293 6012 1.813178 CTAGACTCGCAAGACCAGTGA 59.187 52.381 0.00 0.00 45.01 3.41
2353 6078 1.770061 ACGGTACTTCCCTTGAACCAA 59.230 47.619 0.00 0.00 0.00 3.67
2354 6079 1.345415 GACGGTACTTCCCTTGAACCA 59.655 52.381 0.00 0.00 0.00 3.67
2355 6080 1.670967 CGACGGTACTTCCCTTGAACC 60.671 57.143 0.00 0.00 0.00 3.62
2356 6081 1.000171 ACGACGGTACTTCCCTTGAAC 60.000 52.381 0.00 0.00 0.00 3.18
2357 6082 1.331214 ACGACGGTACTTCCCTTGAA 58.669 50.000 0.00 0.00 0.00 2.69
2358 6083 2.086869 CTACGACGGTACTTCCCTTGA 58.913 52.381 0.00 0.00 0.00 3.02
2359 6084 1.815003 ACTACGACGGTACTTCCCTTG 59.185 52.381 0.00 0.00 0.00 3.61
2371 6096 1.186408 CACGAACACAACACTACGACG 59.814 52.381 0.00 0.00 0.00 5.12
2432 6157 2.294233 ACTAAAGCACAAGCACCACATG 59.706 45.455 0.00 0.00 45.49 3.21
2451 6176 2.030490 TAACACGGCCAACCACGACT 62.030 55.000 2.24 0.00 34.57 4.18
2452 6177 0.952010 ATAACACGGCCAACCACGAC 60.952 55.000 2.24 0.00 34.57 4.34
2453 6178 0.951525 CATAACACGGCCAACCACGA 60.952 55.000 2.24 0.00 34.57 4.35
2454 6179 1.499949 CATAACACGGCCAACCACG 59.500 57.895 2.24 0.00 34.57 4.94
2455 6180 1.211709 GCATAACACGGCCAACCAC 59.788 57.895 2.24 0.00 34.57 4.16
2456 6181 3.674906 GCATAACACGGCCAACCA 58.325 55.556 2.24 0.00 34.57 3.67
2463 6188 3.118884 ACACTAGTTAGGGCATAACACGG 60.119 47.826 22.33 13.89 45.34 4.94
2480 6205 6.736110 AAGGGACACAAGTTAGTAACACTA 57.264 37.500 15.28 0.00 0.00 2.74
2487 6212 3.898482 AGCAAAAGGGACACAAGTTAGT 58.102 40.909 0.00 0.00 0.00 2.24
2488 6213 4.918810 AAGCAAAAGGGACACAAGTTAG 57.081 40.909 0.00 0.00 0.00 2.34
2489 6214 4.142049 CCAAAGCAAAAGGGACACAAGTTA 60.142 41.667 0.00 0.00 0.00 2.24
2490 6215 3.369366 CCAAAGCAAAAGGGACACAAGTT 60.369 43.478 0.00 0.00 0.00 2.66
2491 6216 2.168313 CCAAAGCAAAAGGGACACAAGT 59.832 45.455 0.00 0.00 0.00 3.16
2492 6217 2.168313 ACCAAAGCAAAAGGGACACAAG 59.832 45.455 0.00 0.00 0.00 3.16
2494 6219 1.754226 GACCAAAGCAAAAGGGACACA 59.246 47.619 0.00 0.00 0.00 3.72
2495 6220 1.068588 GGACCAAAGCAAAAGGGACAC 59.931 52.381 0.00 0.00 0.00 3.67
2496 6221 1.408969 GGACCAAAGCAAAAGGGACA 58.591 50.000 0.00 0.00 0.00 4.02
2497 6222 0.679505 GGGACCAAAGCAAAAGGGAC 59.320 55.000 0.00 0.00 0.00 4.46
2498 6223 0.560688 AGGGACCAAAGCAAAAGGGA 59.439 50.000 0.00 0.00 0.00 4.20
2499 6224 1.344438 GAAGGGACCAAAGCAAAAGGG 59.656 52.381 0.00 0.00 0.00 3.95
2500 6225 2.319844 AGAAGGGACCAAAGCAAAAGG 58.680 47.619 0.00 0.00 0.00 3.11
2504 6229 2.693074 GTTGAAGAAGGGACCAAAGCAA 59.307 45.455 0.00 0.00 0.00 3.91
2512 6237 2.885266 GTGAAAGGGTTGAAGAAGGGAC 59.115 50.000 0.00 0.00 0.00 4.46
2536 6267 9.945904 CTGAAAGAACCCTAGAAAAACTATACT 57.054 33.333 0.00 0.00 34.07 2.12
2537 6268 9.722184 ACTGAAAGAACCCTAGAAAAACTATAC 57.278 33.333 0.00 0.00 37.43 1.47
2545 6276 5.072600 TGGCTAACTGAAAGAACCCTAGAAA 59.927 40.000 0.00 0.00 37.43 2.52
2556 6287 3.126001 TGGTGACTGGCTAACTGAAAG 57.874 47.619 0.00 0.00 42.29 2.62
2565 6297 1.340405 CCTAAGCATTGGTGACTGGCT 60.340 52.381 0.00 0.00 36.13 4.75
2566 6298 1.098050 CCTAAGCATTGGTGACTGGC 58.902 55.000 0.00 0.00 0.00 4.85
2580 6312 1.974236 CCTAGGGATCACCAGCCTAAG 59.026 57.143 0.00 0.00 43.89 2.18
2581 6313 1.294068 ACCTAGGGATCACCAGCCTAA 59.706 52.381 14.81 0.00 43.89 2.69
2582 6314 0.941963 ACCTAGGGATCACCAGCCTA 59.058 55.000 14.81 0.00 43.89 3.93
2583 6315 0.399233 GACCTAGGGATCACCAGCCT 60.399 60.000 14.81 0.00 43.89 4.58
2594 6326 3.690475 AAACCTGTAAACGACCTAGGG 57.310 47.619 14.81 0.00 32.81 3.53
2596 6328 6.093082 CCCATAAAAACCTGTAAACGACCTAG 59.907 42.308 0.00 0.00 0.00 3.02
2637 6371 8.636213 AGATAGAAGATAACCAAAAATGCATGG 58.364 33.333 0.00 0.01 42.60 3.66
2654 6388 8.861086 GGTGTATCATCCAGTTAAGATAGAAGA 58.139 37.037 0.00 0.00 0.00 2.87
2655 6389 7.810282 CGGTGTATCATCCAGTTAAGATAGAAG 59.190 40.741 0.00 0.00 0.00 2.85
2656 6390 7.658261 CGGTGTATCATCCAGTTAAGATAGAA 58.342 38.462 0.00 0.00 0.00 2.10
2657 6391 6.294564 GCGGTGTATCATCCAGTTAAGATAGA 60.295 42.308 0.00 0.00 0.00 1.98
2658 6392 5.864474 GCGGTGTATCATCCAGTTAAGATAG 59.136 44.000 0.00 0.00 0.00 2.08
2659 6393 5.303333 TGCGGTGTATCATCCAGTTAAGATA 59.697 40.000 0.00 0.00 0.00 1.98
2660 6394 4.100963 TGCGGTGTATCATCCAGTTAAGAT 59.899 41.667 0.00 0.00 0.00 2.40
2661 6395 3.449377 TGCGGTGTATCATCCAGTTAAGA 59.551 43.478 0.00 0.00 0.00 2.10
2662 6396 3.555956 GTGCGGTGTATCATCCAGTTAAG 59.444 47.826 0.00 0.00 0.00 1.85
2663 6397 3.527533 GTGCGGTGTATCATCCAGTTAA 58.472 45.455 0.00 0.00 0.00 2.01
2664 6398 2.480587 CGTGCGGTGTATCATCCAGTTA 60.481 50.000 0.00 0.00 0.00 2.24
2665 6399 1.739035 CGTGCGGTGTATCATCCAGTT 60.739 52.381 0.00 0.00 0.00 3.16
2666 6400 0.179111 CGTGCGGTGTATCATCCAGT 60.179 55.000 0.00 0.00 0.00 4.00
2667 6401 0.179111 ACGTGCGGTGTATCATCCAG 60.179 55.000 0.00 0.00 0.00 3.86
2668 6402 0.248012 AACGTGCGGTGTATCATCCA 59.752 50.000 0.00 0.00 0.00 3.41
2669 6403 0.650512 CAACGTGCGGTGTATCATCC 59.349 55.000 0.95 0.00 0.00 3.51
2670 6404 0.026285 GCAACGTGCGGTGTATCATC 59.974 55.000 11.36 0.00 34.82 2.92
2671 6405 2.086510 GCAACGTGCGGTGTATCAT 58.913 52.632 11.36 0.00 34.82 2.45
2672 6406 3.556625 GCAACGTGCGGTGTATCA 58.443 55.556 11.36 0.00 34.82 2.15
2681 6415 2.000447 CTAACTCCCTTAGCAACGTGC 59.000 52.381 0.00 0.00 45.46 5.34
2682 6416 3.314541 ACTAACTCCCTTAGCAACGTG 57.685 47.619 0.00 0.00 36.04 4.49
2683 6417 3.660865 CAACTAACTCCCTTAGCAACGT 58.339 45.455 0.00 0.00 36.04 3.99
2684 6418 2.415512 GCAACTAACTCCCTTAGCAACG 59.584 50.000 0.00 0.00 36.04 4.10
2685 6419 2.415512 CGCAACTAACTCCCTTAGCAAC 59.584 50.000 0.00 0.00 36.04 4.17
2686 6420 2.614481 CCGCAACTAACTCCCTTAGCAA 60.614 50.000 0.00 0.00 36.04 3.91
2687 6421 1.066430 CCGCAACTAACTCCCTTAGCA 60.066 52.381 0.00 0.00 36.04 3.49
2688 6422 1.066358 ACCGCAACTAACTCCCTTAGC 60.066 52.381 0.00 0.00 36.04 3.09
2689 6423 4.667519 ATACCGCAACTAACTCCCTTAG 57.332 45.455 0.00 0.00 38.32 2.18
2690 6424 6.736110 AATATACCGCAACTAACTCCCTTA 57.264 37.500 0.00 0.00 0.00 2.69
2691 6425 5.625568 AATATACCGCAACTAACTCCCTT 57.374 39.130 0.00 0.00 0.00 3.95
2692 6426 5.129815 TGAAATATACCGCAACTAACTCCCT 59.870 40.000 0.00 0.00 0.00 4.20
2693 6427 5.362263 TGAAATATACCGCAACTAACTCCC 58.638 41.667 0.00 0.00 0.00 4.30
2694 6428 6.913873 TTGAAATATACCGCAACTAACTCC 57.086 37.500 0.00 0.00 0.00 3.85
2695 6429 8.138365 TCATTGAAATATACCGCAACTAACTC 57.862 34.615 0.00 0.00 0.00 3.01
2696 6430 8.500753 TTCATTGAAATATACCGCAACTAACT 57.499 30.769 0.00 0.00 0.00 2.24
2697 6431 9.730420 AATTCATTGAAATATACCGCAACTAAC 57.270 29.630 2.68 0.00 0.00 2.34
2847 6581 1.980232 CACCACCACATGCAGCCAT 60.980 57.895 0.00 0.00 0.00 4.40
2848 6582 2.598099 CACCACCACATGCAGCCA 60.598 61.111 0.00 0.00 0.00 4.75
2849 6583 2.282391 TCACCACCACATGCAGCC 60.282 61.111 0.00 0.00 0.00 4.85
2850 6584 1.174712 AACTCACCACCACATGCAGC 61.175 55.000 0.00 0.00 0.00 5.25
2851 6585 0.877071 GAACTCACCACCACATGCAG 59.123 55.000 0.00 0.00 0.00 4.41
2852 6586 0.473755 AGAACTCACCACCACATGCA 59.526 50.000 0.00 0.00 0.00 3.96
2853 6587 1.609208 AAGAACTCACCACCACATGC 58.391 50.000 0.00 0.00 0.00 4.06
2854 6588 3.004734 GGAAAAGAACTCACCACCACATG 59.995 47.826 0.00 0.00 0.00 3.21
2855 6589 3.222603 GGAAAAGAACTCACCACCACAT 58.777 45.455 0.00 0.00 0.00 3.21
2856 6590 2.025793 TGGAAAAGAACTCACCACCACA 60.026 45.455 0.00 0.00 0.00 4.17
2857 6591 2.650322 TGGAAAAGAACTCACCACCAC 58.350 47.619 0.00 0.00 0.00 4.16
2858 6592 3.374042 TTGGAAAAGAACTCACCACCA 57.626 42.857 0.00 0.00 0.00 4.17
2859 6593 3.552890 GCATTGGAAAAGAACTCACCACC 60.553 47.826 0.00 0.00 0.00 4.61
2860 6594 3.068024 TGCATTGGAAAAGAACTCACCAC 59.932 43.478 0.00 0.00 0.00 4.16
2861 6595 3.295093 TGCATTGGAAAAGAACTCACCA 58.705 40.909 0.00 0.00 0.00 4.17
2862 6596 4.240096 CATGCATTGGAAAAGAACTCACC 58.760 43.478 0.00 0.00 0.00 4.02
2882 6616 2.825532 GTCCACCTTAACATGCAACCAT 59.174 45.455 0.00 0.00 0.00 3.55
2883 6617 2.235016 GTCCACCTTAACATGCAACCA 58.765 47.619 0.00 0.00 0.00 3.67
2884 6618 1.544246 GGTCCACCTTAACATGCAACC 59.456 52.381 0.00 0.00 0.00 3.77
2885 6619 2.514803 AGGTCCACCTTAACATGCAAC 58.485 47.619 0.00 0.00 46.09 4.17
2886 6620 2.969821 AGGTCCACCTTAACATGCAA 57.030 45.000 0.00 0.00 46.09 4.08
2897 6631 0.917333 TGGATGGGGTAAGGTCCACC 60.917 60.000 0.00 0.00 35.91 4.61
2898 6632 1.222567 ATGGATGGGGTAAGGTCCAC 58.777 55.000 0.00 0.00 43.02 4.02
2899 6633 2.899906 TATGGATGGGGTAAGGTCCA 57.100 50.000 0.00 0.00 44.22 4.02
2900 6634 4.741928 AATTATGGATGGGGTAAGGTCC 57.258 45.455 0.00 0.00 0.00 4.46
2901 6635 7.947890 TCATTTAATTATGGATGGGGTAAGGTC 59.052 37.037 0.00 0.00 0.00 3.85
2902 6636 7.831955 TCATTTAATTATGGATGGGGTAAGGT 58.168 34.615 0.00 0.00 0.00 3.50
2903 6637 8.899887 ATCATTTAATTATGGATGGGGTAAGG 57.100 34.615 0.00 0.00 0.00 2.69
2907 6641 9.842196 ACATTATCATTTAATTATGGATGGGGT 57.158 29.630 0.00 0.00 0.00 4.95
2922 6656 8.689061 ACATGCAAGTATGTCACATTATCATTT 58.311 29.630 0.00 0.00 36.60 2.32
2923 6657 8.229253 ACATGCAAGTATGTCACATTATCATT 57.771 30.769 0.00 0.00 36.60 2.57
2924 6658 7.812690 ACATGCAAGTATGTCACATTATCAT 57.187 32.000 0.00 0.00 36.60 2.45
2925 6659 7.628769 AACATGCAAGTATGTCACATTATCA 57.371 32.000 0.00 0.00 40.24 2.15
2926 6660 9.655769 CTAAACATGCAAGTATGTCACATTATC 57.344 33.333 0.00 0.00 40.24 1.75
2927 6661 9.394767 TCTAAACATGCAAGTATGTCACATTAT 57.605 29.630 0.00 0.00 40.24 1.28
2928 6662 8.785329 TCTAAACATGCAAGTATGTCACATTA 57.215 30.769 0.00 0.06 40.24 1.90
2929 6663 7.686438 TCTAAACATGCAAGTATGTCACATT 57.314 32.000 0.00 0.00 40.24 2.71
2930 6664 7.870509 ATCTAAACATGCAAGTATGTCACAT 57.129 32.000 4.29 0.00 40.24 3.21
2931 6665 8.785329 TTATCTAAACATGCAAGTATGTCACA 57.215 30.769 4.29 0.00 40.24 3.58
2951 6685 9.440761 AGAGTCATCCCACTAACTTATTTATCT 57.559 33.333 0.00 0.00 0.00 1.98
2956 6690 9.892130 CTAAAAGAGTCATCCCACTAACTTATT 57.108 33.333 0.00 0.00 0.00 1.40
2957 6691 8.487028 CCTAAAAGAGTCATCCCACTAACTTAT 58.513 37.037 0.00 0.00 0.00 1.73
2958 6692 7.456902 ACCTAAAAGAGTCATCCCACTAACTTA 59.543 37.037 0.00 0.00 0.00 2.24
2959 6693 6.272558 ACCTAAAAGAGTCATCCCACTAACTT 59.727 38.462 0.00 0.00 0.00 2.66
2960 6694 5.785940 ACCTAAAAGAGTCATCCCACTAACT 59.214 40.000 0.00 0.00 0.00 2.24
2961 6695 6.051179 ACCTAAAAGAGTCATCCCACTAAC 57.949 41.667 0.00 0.00 0.00 2.34
2962 6696 7.844779 AGATACCTAAAAGAGTCATCCCACTAA 59.155 37.037 0.00 0.00 0.00 2.24
2963 6697 7.363031 AGATACCTAAAAGAGTCATCCCACTA 58.637 38.462 0.00 0.00 0.00 2.74
2964 6698 6.206042 AGATACCTAAAAGAGTCATCCCACT 58.794 40.000 0.00 0.00 0.00 4.00
2965 6699 6.487299 AGATACCTAAAAGAGTCATCCCAC 57.513 41.667 0.00 0.00 0.00 4.61
2966 6700 7.592736 TCTAGATACCTAAAAGAGTCATCCCA 58.407 38.462 0.00 0.00 0.00 4.37
2967 6701 8.480133 TTCTAGATACCTAAAAGAGTCATCCC 57.520 38.462 0.00 0.00 0.00 3.85
2985 6719 8.752187 TGCCATTTTCTTTTGCTAATTCTAGAT 58.248 29.630 0.00 0.00 0.00 1.98
2986 6720 8.121305 TGCCATTTTCTTTTGCTAATTCTAGA 57.879 30.769 0.00 0.00 0.00 2.43
2987 6721 8.814235 CATGCCATTTTCTTTTGCTAATTCTAG 58.186 33.333 0.00 0.00 0.00 2.43
2988 6722 8.530311 TCATGCCATTTTCTTTTGCTAATTCTA 58.470 29.630 0.00 0.00 0.00 2.10
2989 6723 7.388437 TCATGCCATTTTCTTTTGCTAATTCT 58.612 30.769 0.00 0.00 0.00 2.40
2990 6724 7.599630 TCATGCCATTTTCTTTTGCTAATTC 57.400 32.000 0.00 0.00 0.00 2.17
2991 6725 8.570068 AATCATGCCATTTTCTTTTGCTAATT 57.430 26.923 0.00 0.00 0.00 1.40
2992 6726 8.570068 AAATCATGCCATTTTCTTTTGCTAAT 57.430 26.923 0.00 0.00 0.00 1.73
2993 6727 7.982761 AAATCATGCCATTTTCTTTTGCTAA 57.017 28.000 0.00 0.00 0.00 3.09
2994 6728 8.530311 TCTAAATCATGCCATTTTCTTTTGCTA 58.470 29.630 0.00 0.00 0.00 3.49
2995 6729 7.388437 TCTAAATCATGCCATTTTCTTTTGCT 58.612 30.769 0.00 0.00 0.00 3.91
2996 6730 7.599630 TCTAAATCATGCCATTTTCTTTTGC 57.400 32.000 0.00 0.00 0.00 3.68
2997 6731 8.662141 CCTTCTAAATCATGCCATTTTCTTTTG 58.338 33.333 0.00 0.00 0.00 2.44
2998 6732 8.596293 TCCTTCTAAATCATGCCATTTTCTTTT 58.404 29.630 0.00 0.00 0.00 2.27
2999 6733 8.137745 TCCTTCTAAATCATGCCATTTTCTTT 57.862 30.769 0.00 0.00 0.00 2.52
3000 6734 7.616935 TCTCCTTCTAAATCATGCCATTTTCTT 59.383 33.333 0.00 0.00 0.00 2.52
3001 6735 7.121382 TCTCCTTCTAAATCATGCCATTTTCT 58.879 34.615 0.00 0.00 0.00 2.52
3002 6736 7.338800 TCTCCTTCTAAATCATGCCATTTTC 57.661 36.000 0.00 0.00 0.00 2.29
3003 6737 7.722949 TTCTCCTTCTAAATCATGCCATTTT 57.277 32.000 0.00 0.00 0.00 1.82
3004 6738 7.722949 TTTCTCCTTCTAAATCATGCCATTT 57.277 32.000 0.00 0.00 0.00 2.32
3005 6739 7.201974 CCATTTCTCCTTCTAAATCATGCCATT 60.202 37.037 0.00 0.00 0.00 3.16
3006 6740 6.267014 CCATTTCTCCTTCTAAATCATGCCAT 59.733 38.462 0.00 0.00 0.00 4.40
3007 6741 5.595542 CCATTTCTCCTTCTAAATCATGCCA 59.404 40.000 0.00 0.00 0.00 4.92
3008 6742 5.595952 ACCATTTCTCCTTCTAAATCATGCC 59.404 40.000 0.00 0.00 0.00 4.40
3009 6743 6.501781 CACCATTTCTCCTTCTAAATCATGC 58.498 40.000 0.00 0.00 0.00 4.06
3010 6744 6.460676 GGCACCATTTCTCCTTCTAAATCATG 60.461 42.308 0.00 0.00 0.00 3.07
3011 6745 5.595952 GGCACCATTTCTCCTTCTAAATCAT 59.404 40.000 0.00 0.00 0.00 2.45
3012 6746 4.949856 GGCACCATTTCTCCTTCTAAATCA 59.050 41.667 0.00 0.00 0.00 2.57
3013 6747 4.949856 TGGCACCATTTCTCCTTCTAAATC 59.050 41.667 0.00 0.00 0.00 2.17
3014 6748 4.934356 TGGCACCATTTCTCCTTCTAAAT 58.066 39.130 0.00 0.00 0.00 1.40
3015 6749 4.380843 TGGCACCATTTCTCCTTCTAAA 57.619 40.909 0.00 0.00 0.00 1.85
3016 6750 4.380843 TTGGCACCATTTCTCCTTCTAA 57.619 40.909 0.00 0.00 0.00 2.10
3017 6751 4.380843 TTTGGCACCATTTCTCCTTCTA 57.619 40.909 0.00 0.00 0.00 2.10
3018 6752 2.978156 TTGGCACCATTTCTCCTTCT 57.022 45.000 0.00 0.00 0.00 2.85
3019 6753 4.541973 ATTTTGGCACCATTTCTCCTTC 57.458 40.909 0.00 0.00 0.00 3.46
3020 6754 6.625532 AATATTTTGGCACCATTTCTCCTT 57.374 33.333 0.00 0.00 0.00 3.36
3021 6755 6.625532 AAATATTTTGGCACCATTTCTCCT 57.374 33.333 0.00 0.00 0.00 3.69
3022 6756 7.686438 AAAAATATTTTGGCACCATTTCTCC 57.314 32.000 14.04 0.00 0.00 3.71
3043 6777 9.227490 CGTCTGTGTTTGTATTATGTTCAAAAA 57.773 29.630 0.00 0.00 33.80 1.94
3044 6778 7.377397 GCGTCTGTGTTTGTATTATGTTCAAAA 59.623 33.333 0.00 0.00 33.80 2.44
3045 6779 6.853872 GCGTCTGTGTTTGTATTATGTTCAAA 59.146 34.615 0.00 0.00 0.00 2.69
3046 6780 6.203915 AGCGTCTGTGTTTGTATTATGTTCAA 59.796 34.615 0.00 0.00 0.00 2.69
3047 6781 5.699001 AGCGTCTGTGTTTGTATTATGTTCA 59.301 36.000 0.00 0.00 0.00 3.18
3048 6782 6.128661 TGAGCGTCTGTGTTTGTATTATGTTC 60.129 38.462 0.00 0.00 0.00 3.18
3049 6783 5.699001 TGAGCGTCTGTGTTTGTATTATGTT 59.301 36.000 0.00 0.00 0.00 2.71
3050 6784 5.234752 TGAGCGTCTGTGTTTGTATTATGT 58.765 37.500 0.00 0.00 0.00 2.29
3051 6785 5.576774 TCTGAGCGTCTGTGTTTGTATTATG 59.423 40.000 0.00 0.00 0.00 1.90
3052 6786 5.720202 TCTGAGCGTCTGTGTTTGTATTAT 58.280 37.500 0.00 0.00 0.00 1.28
3053 6787 5.128992 TCTGAGCGTCTGTGTTTGTATTA 57.871 39.130 0.00 0.00 0.00 0.98
3054 6788 3.990092 TCTGAGCGTCTGTGTTTGTATT 58.010 40.909 0.00 0.00 0.00 1.89
3055 6789 3.660501 TCTGAGCGTCTGTGTTTGTAT 57.339 42.857 0.00 0.00 0.00 2.29
3056 6790 3.446310 TTCTGAGCGTCTGTGTTTGTA 57.554 42.857 0.00 0.00 0.00 2.41
3057 6791 2.309528 TTCTGAGCGTCTGTGTTTGT 57.690 45.000 0.00 0.00 0.00 2.83
3058 6792 3.885484 ATTTCTGAGCGTCTGTGTTTG 57.115 42.857 0.00 0.00 0.00 2.93
3059 6793 3.428870 CGTATTTCTGAGCGTCTGTGTTT 59.571 43.478 0.00 0.00 0.00 2.83
3060 6794 2.987149 CGTATTTCTGAGCGTCTGTGTT 59.013 45.455 0.00 0.00 0.00 3.32
3061 6795 2.596452 CGTATTTCTGAGCGTCTGTGT 58.404 47.619 0.00 0.00 0.00 3.72
3062 6796 1.321743 GCGTATTTCTGAGCGTCTGTG 59.678 52.381 0.00 0.00 0.00 3.66
3063 6797 1.067846 TGCGTATTTCTGAGCGTCTGT 60.068 47.619 0.00 0.00 0.00 3.41
3064 6798 1.321743 GTGCGTATTTCTGAGCGTCTG 59.678 52.381 0.00 0.00 0.00 3.51
3065 6799 1.067846 TGTGCGTATTTCTGAGCGTCT 60.068 47.619 0.00 0.00 0.00 4.18
3066 6800 1.346365 TGTGCGTATTTCTGAGCGTC 58.654 50.000 0.00 0.00 0.00 5.19
3067 6801 2.010145 ATGTGCGTATTTCTGAGCGT 57.990 45.000 0.00 0.00 0.00 5.07
3068 6802 2.857748 TGTATGTGCGTATTTCTGAGCG 59.142 45.455 0.00 0.00 0.00 5.03
3069 6803 3.865745 AGTGTATGTGCGTATTTCTGAGC 59.134 43.478 0.00 0.00 0.00 4.26
3070 6804 5.004821 GTGAGTGTATGTGCGTATTTCTGAG 59.995 44.000 0.00 0.00 0.00 3.35
3071 6805 4.862574 GTGAGTGTATGTGCGTATTTCTGA 59.137 41.667 0.00 0.00 0.00 3.27
3072 6806 4.032900 GGTGAGTGTATGTGCGTATTTCTG 59.967 45.833 0.00 0.00 0.00 3.02
3073 6807 4.081642 AGGTGAGTGTATGTGCGTATTTCT 60.082 41.667 0.00 0.00 0.00 2.52
3074 6808 4.181578 AGGTGAGTGTATGTGCGTATTTC 58.818 43.478 0.00 0.00 0.00 2.17
3075 6809 4.081642 AGAGGTGAGTGTATGTGCGTATTT 60.082 41.667 0.00 0.00 0.00 1.40
3076 6810 3.447586 AGAGGTGAGTGTATGTGCGTATT 59.552 43.478 0.00 0.00 0.00 1.89
3077 6811 3.024547 AGAGGTGAGTGTATGTGCGTAT 58.975 45.455 0.00 0.00 0.00 3.06
3078 6812 2.443416 AGAGGTGAGTGTATGTGCGTA 58.557 47.619 0.00 0.00 0.00 4.42
3079 6813 1.257743 AGAGGTGAGTGTATGTGCGT 58.742 50.000 0.00 0.00 0.00 5.24
3080 6814 3.066760 TCATAGAGGTGAGTGTATGTGCG 59.933 47.826 0.00 0.00 0.00 5.34
3081 6815 4.655762 TCATAGAGGTGAGTGTATGTGC 57.344 45.455 0.00 0.00 0.00 4.57
3082 6816 5.037385 CGTTCATAGAGGTGAGTGTATGTG 58.963 45.833 0.00 0.00 0.00 3.21
3083 6817 4.440250 GCGTTCATAGAGGTGAGTGTATGT 60.440 45.833 0.00 0.00 0.00 2.29
3084 6818 4.045104 GCGTTCATAGAGGTGAGTGTATG 58.955 47.826 0.00 0.00 0.00 2.39
3085 6819 3.699538 TGCGTTCATAGAGGTGAGTGTAT 59.300 43.478 0.00 0.00 0.00 2.29
3086 6820 3.086282 TGCGTTCATAGAGGTGAGTGTA 58.914 45.455 0.00 0.00 0.00 2.90
3087 6821 1.893137 TGCGTTCATAGAGGTGAGTGT 59.107 47.619 0.00 0.00 0.00 3.55
3088 6822 2.263077 GTGCGTTCATAGAGGTGAGTG 58.737 52.381 0.00 0.00 0.00 3.51
3089 6823 1.135373 CGTGCGTTCATAGAGGTGAGT 60.135 52.381 0.00 0.00 0.00 3.41
3090 6824 1.550065 CGTGCGTTCATAGAGGTGAG 58.450 55.000 0.00 0.00 0.00 3.51
3091 6825 0.457853 GCGTGCGTTCATAGAGGTGA 60.458 55.000 0.00 0.00 0.00 4.02
3092 6826 0.735978 TGCGTGCGTTCATAGAGGTG 60.736 55.000 0.00 0.00 0.00 4.00
3093 6827 0.736325 GTGCGTGCGTTCATAGAGGT 60.736 55.000 0.00 0.00 0.00 3.85
3094 6828 1.742900 CGTGCGTGCGTTCATAGAGG 61.743 60.000 0.00 0.00 0.00 3.69
3095 6829 1.625870 CGTGCGTGCGTTCATAGAG 59.374 57.895 0.00 0.00 0.00 2.43
3096 6830 2.441378 GCGTGCGTGCGTTCATAGA 61.441 57.895 3.11 0.00 0.00 1.98
3097 6831 2.020016 GCGTGCGTGCGTTCATAG 59.980 61.111 3.11 0.00 0.00 2.23
3098 6832 2.735100 TGCGTGCGTGCGTTCATA 60.735 55.556 3.11 0.00 37.81 2.15
3099 6833 4.368808 GTGCGTGCGTGCGTTCAT 62.369 61.111 3.11 0.00 37.81 2.57
3106 6840 3.411351 GTAGGGTGTGCGTGCGTG 61.411 66.667 0.00 0.00 0.00 5.34
3107 6841 4.675029 GGTAGGGTGTGCGTGCGT 62.675 66.667 0.00 0.00 0.00 5.24
3108 6842 4.373116 AGGTAGGGTGTGCGTGCG 62.373 66.667 0.00 0.00 0.00 5.34
3109 6843 1.601419 TAGAGGTAGGGTGTGCGTGC 61.601 60.000 0.00 0.00 0.00 5.34
3110 6844 1.112113 ATAGAGGTAGGGTGTGCGTG 58.888 55.000 0.00 0.00 0.00 5.34
3111 6845 1.112113 CATAGAGGTAGGGTGTGCGT 58.888 55.000 0.00 0.00 0.00 5.24
3112 6846 1.338337 CTCATAGAGGTAGGGTGTGCG 59.662 57.143 0.00 0.00 0.00 5.34
3113 6847 2.389715 ACTCATAGAGGTAGGGTGTGC 58.610 52.381 0.00 0.00 33.35 4.57
3114 6848 3.890147 GGTACTCATAGAGGTAGGGTGTG 59.110 52.174 0.00 0.00 33.35 3.82
3115 6849 3.792684 AGGTACTCATAGAGGTAGGGTGT 59.207 47.826 0.00 0.00 33.35 4.16
3116 6850 4.456662 AGGTACTCATAGAGGTAGGGTG 57.543 50.000 0.00 0.00 33.35 4.61
3132 6866 2.165437 CAGCTCAGTCTCTTGGAGGTAC 59.835 54.545 0.00 0.00 37.29 3.34
3133 6867 2.451490 CAGCTCAGTCTCTTGGAGGTA 58.549 52.381 0.00 0.00 37.29 3.08
3134 6868 1.265236 CAGCTCAGTCTCTTGGAGGT 58.735 55.000 0.00 0.00 39.76 3.85
3135 6869 0.536260 CCAGCTCAGTCTCTTGGAGG 59.464 60.000 0.00 0.00 0.00 4.30
3136 6870 0.108233 GCCAGCTCAGTCTCTTGGAG 60.108 60.000 0.00 0.00 0.00 3.86
3137 6871 0.833409 TGCCAGCTCAGTCTCTTGGA 60.833 55.000 0.00 0.00 0.00 3.53
3138 6872 0.252479 ATGCCAGCTCAGTCTCTTGG 59.748 55.000 0.00 0.00 0.00 3.61
3139 6873 2.110901 AATGCCAGCTCAGTCTCTTG 57.889 50.000 0.00 0.00 0.00 3.02
3140 6874 3.453717 TGATAATGCCAGCTCAGTCTCTT 59.546 43.478 0.00 0.00 0.00 2.85
3141 6875 3.036819 TGATAATGCCAGCTCAGTCTCT 58.963 45.455 0.00 0.00 0.00 3.10
3142 6876 3.465742 TGATAATGCCAGCTCAGTCTC 57.534 47.619 0.00 0.00 0.00 3.36
3143 6877 3.647113 AGATGATAATGCCAGCTCAGTCT 59.353 43.478 0.00 0.00 0.00 3.24
3144 6878 4.005487 AGATGATAATGCCAGCTCAGTC 57.995 45.455 0.00 0.00 0.00 3.51
3145 6879 4.141551 TGAAGATGATAATGCCAGCTCAGT 60.142 41.667 0.00 0.00 29.06 3.41
3146 6880 4.386711 TGAAGATGATAATGCCAGCTCAG 58.613 43.478 0.00 0.00 29.06 3.35
3147 6881 4.426736 TGAAGATGATAATGCCAGCTCA 57.573 40.909 0.00 0.00 29.06 4.26
3148 6882 5.001874 TCATGAAGATGATAATGCCAGCTC 58.998 41.667 0.00 0.00 33.40 4.09
3149 6883 4.981812 TCATGAAGATGATAATGCCAGCT 58.018 39.130 0.00 0.00 33.40 4.24
3150 6884 5.899120 ATCATGAAGATGATAATGCCAGC 57.101 39.130 0.00 0.00 45.84 4.85
3151 6885 7.332678 TCGTAATCATGAAGATGATAATGCCAG 59.667 37.037 0.00 0.00 46.79 4.85
3152 6886 7.160726 TCGTAATCATGAAGATGATAATGCCA 58.839 34.615 0.00 0.00 46.79 4.92
3153 6887 7.601073 TCGTAATCATGAAGATGATAATGCC 57.399 36.000 0.00 0.00 46.79 4.40
3154 6888 8.715998 ACTTCGTAATCATGAAGATGATAATGC 58.284 33.333 4.75 0.00 46.79 3.56
3156 6890 9.133627 CGACTTCGTAATCATGAAGATGATAAT 57.866 33.333 4.75 0.00 46.62 1.28
3157 6891 7.114953 GCGACTTCGTAATCATGAAGATGATAA 59.885 37.037 4.75 0.00 46.62 1.75
3158 6892 6.582672 GCGACTTCGTAATCATGAAGATGATA 59.417 38.462 4.75 0.00 46.62 2.15
3159 6893 5.403766 GCGACTTCGTAATCATGAAGATGAT 59.596 40.000 4.75 0.00 46.62 2.45
3160 6894 4.740205 GCGACTTCGTAATCATGAAGATGA 59.260 41.667 4.75 0.00 46.62 2.92
3161 6895 4.084849 GGCGACTTCGTAATCATGAAGATG 60.085 45.833 4.75 2.80 46.62 2.90
3162 6896 4.051922 GGCGACTTCGTAATCATGAAGAT 58.948 43.478 4.75 0.00 46.62 2.40
3163 6897 3.119280 TGGCGACTTCGTAATCATGAAGA 60.119 43.478 4.75 0.00 46.62 2.87
3165 6899 2.927477 GTGGCGACTTCGTAATCATGAA 59.073 45.455 0.00 0.00 42.22 2.57
3166 6900 2.165641 AGTGGCGACTTCGTAATCATGA 59.834 45.455 0.00 0.00 42.22 3.07
3167 6901 2.540515 AGTGGCGACTTCGTAATCATG 58.459 47.619 0.00 0.00 42.22 3.07
3168 6902 2.961526 AGTGGCGACTTCGTAATCAT 57.038 45.000 0.00 0.00 42.22 2.45
3169 6903 3.504863 GTTAGTGGCGACTTCGTAATCA 58.495 45.455 6.71 0.00 42.22 2.57
3170 6904 2.529090 CGTTAGTGGCGACTTCGTAATC 59.471 50.000 6.71 0.00 42.22 1.75
3171 6905 2.523015 CGTTAGTGGCGACTTCGTAAT 58.477 47.619 6.71 0.00 42.22 1.89
3172 6906 1.967762 CGTTAGTGGCGACTTCGTAA 58.032 50.000 6.71 0.00 42.22 3.18
3173 6907 0.454957 GCGTTAGTGGCGACTTCGTA 60.455 55.000 20.07 0.00 42.22 3.43
3174 6908 1.731969 GCGTTAGTGGCGACTTCGT 60.732 57.895 20.07 0.00 42.22 3.85
3175 6909 2.442188 GGCGTTAGTGGCGACTTCG 61.442 63.158 6.71 13.33 43.27 3.79
3176 6910 1.080025 AGGCGTTAGTGGCGACTTC 60.080 57.895 6.71 0.23 46.72 3.01
3177 6911 3.057337 AGGCGTTAGTGGCGACTT 58.943 55.556 6.71 0.00 46.72 3.01
3179 6913 1.226030 ACAAAGGCGTTAGTGGCGAC 61.226 55.000 0.00 0.00 39.82 5.19
3180 6914 0.317799 TACAAAGGCGTTAGTGGCGA 59.682 50.000 0.00 0.00 39.82 5.54
3181 6915 0.719465 CTACAAAGGCGTTAGTGGCG 59.281 55.000 0.00 0.00 39.82 5.69
3182 6916 1.730612 GACTACAAAGGCGTTAGTGGC 59.269 52.381 0.00 0.00 0.00 5.01
3191 6925 0.037975 TTCCCGTCGACTACAAAGGC 60.038 55.000 14.70 0.00 0.00 4.35
3192 6926 1.706443 GTTCCCGTCGACTACAAAGG 58.294 55.000 14.70 5.96 0.00 3.11
3193 6927 1.334054 CGTTCCCGTCGACTACAAAG 58.666 55.000 14.70 1.76 0.00 2.77
3194 6928 0.667993 ACGTTCCCGTCGACTACAAA 59.332 50.000 14.70 0.00 46.28 2.83
3195 6929 2.330254 ACGTTCCCGTCGACTACAA 58.670 52.632 14.70 0.00 46.28 2.41
3196 6930 4.063529 ACGTTCCCGTCGACTACA 57.936 55.556 14.70 0.00 46.28 2.74
3205 6939 0.317479 AGTGGAAGAAGACGTTCCCG 59.683 55.000 0.86 0.00 42.63 5.14
3206 6940 1.343465 TCAGTGGAAGAAGACGTTCCC 59.657 52.381 0.86 0.00 42.63 3.97
3207 6941 2.801111 GTTCAGTGGAAGAAGACGTTCC 59.199 50.000 0.00 0.00 43.45 3.62
3208 6942 2.471743 CGTTCAGTGGAAGAAGACGTTC 59.528 50.000 0.00 0.00 32.62 3.95
3209 6943 2.470821 CGTTCAGTGGAAGAAGACGTT 58.529 47.619 0.00 0.00 32.62 3.99
3210 6944 1.868519 GCGTTCAGTGGAAGAAGACGT 60.869 52.381 0.00 0.00 32.62 4.34
3211 6945 0.784778 GCGTTCAGTGGAAGAAGACG 59.215 55.000 0.00 0.00 32.62 4.18
3212 6946 1.527311 GTGCGTTCAGTGGAAGAAGAC 59.473 52.381 0.00 0.00 32.62 3.01
3213 6947 1.412710 AGTGCGTTCAGTGGAAGAAGA 59.587 47.619 0.00 0.00 32.62 2.87
3214 6948 1.528586 CAGTGCGTTCAGTGGAAGAAG 59.471 52.381 0.00 0.00 39.42 2.85
3215 6949 1.581934 CAGTGCGTTCAGTGGAAGAA 58.418 50.000 0.00 0.00 39.42 2.52
3216 6950 0.880278 GCAGTGCGTTCAGTGGAAGA 60.880 55.000 0.00 0.00 42.51 2.87
3217 6951 1.159713 TGCAGTGCGTTCAGTGGAAG 61.160 55.000 11.20 0.00 40.36 3.46
3218 6952 1.153269 TGCAGTGCGTTCAGTGGAA 60.153 52.632 11.20 0.00 40.36 3.53
3219 6953 1.887242 GTGCAGTGCGTTCAGTGGA 60.887 57.895 11.20 0.00 42.51 4.02
3220 6954 1.509644 ATGTGCAGTGCGTTCAGTGG 61.510 55.000 11.20 0.00 42.51 4.00
3221 6955 0.110509 GATGTGCAGTGCGTTCAGTG 60.111 55.000 11.20 0.00 44.52 3.66
3222 6956 0.250038 AGATGTGCAGTGCGTTCAGT 60.250 50.000 11.20 0.00 0.00 3.41
3223 6957 1.391485 GTAGATGTGCAGTGCGTTCAG 59.609 52.381 11.20 0.00 0.00 3.02
3224 6958 1.270041 TGTAGATGTGCAGTGCGTTCA 60.270 47.619 11.20 10.05 0.00 3.18
3225 6959 1.391485 CTGTAGATGTGCAGTGCGTTC 59.609 52.381 11.20 7.12 32.04 3.95
3226 6960 1.000843 TCTGTAGATGTGCAGTGCGTT 59.999 47.619 11.20 0.00 37.64 4.84
3227 6961 0.603065 TCTGTAGATGTGCAGTGCGT 59.397 50.000 11.20 0.00 37.64 5.24
3228 6962 1.657594 CTTCTGTAGATGTGCAGTGCG 59.342 52.381 11.20 0.00 37.64 5.34
3229 6963 2.670414 GACTTCTGTAGATGTGCAGTGC 59.330 50.000 8.58 8.58 37.64 4.40
3230 6964 3.056250 AGGACTTCTGTAGATGTGCAGTG 60.056 47.826 17.32 5.29 41.00 3.66
3231 6965 3.056250 CAGGACTTCTGTAGATGTGCAGT 60.056 47.826 17.32 3.31 41.00 4.40
3232 6966 3.194329 TCAGGACTTCTGTAGATGTGCAG 59.806 47.826 17.32 1.18 43.76 4.41
3233 6967 3.165071 TCAGGACTTCTGTAGATGTGCA 58.835 45.455 17.32 0.00 43.76 4.57
3234 6968 3.876274 TCAGGACTTCTGTAGATGTGC 57.124 47.619 10.19 10.19 43.76 4.57
3235 6969 8.954950 ATTATTTCAGGACTTCTGTAGATGTG 57.045 34.615 5.29 0.00 43.76 3.21
3236 6970 9.965902 AAATTATTTCAGGACTTCTGTAGATGT 57.034 29.630 0.59 0.59 43.76 3.06
3251 6985 9.891535 GCTCGCATTTTTCTAAAATTATTTCAG 57.108 29.630 0.00 0.00 0.00 3.02
3252 6986 9.416794 TGCTCGCATTTTTCTAAAATTATTTCA 57.583 25.926 0.00 0.00 0.00 2.69
3253 6987 9.891535 CTGCTCGCATTTTTCTAAAATTATTTC 57.108 29.630 0.00 0.00 0.00 2.17
3254 6988 9.423061 ACTGCTCGCATTTTTCTAAAATTATTT 57.577 25.926 0.00 0.00 0.00 1.40
3255 6989 8.986477 ACTGCTCGCATTTTTCTAAAATTATT 57.014 26.923 0.00 0.00 0.00 1.40
3256 6990 9.722056 CTACTGCTCGCATTTTTCTAAAATTAT 57.278 29.630 0.00 0.00 0.00 1.28
3257 6991 8.726988 ACTACTGCTCGCATTTTTCTAAAATTA 58.273 29.630 0.00 0.00 0.00 1.40
3258 6992 7.593825 ACTACTGCTCGCATTTTTCTAAAATT 58.406 30.769 0.00 0.00 0.00 1.82
3259 6993 7.145932 ACTACTGCTCGCATTTTTCTAAAAT 57.854 32.000 0.00 0.00 0.00 1.82
3260 6994 6.554334 ACTACTGCTCGCATTTTTCTAAAA 57.446 33.333 0.00 0.00 0.00 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.