Multiple sequence alignment - TraesCS3D01G458900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G458900 chr3D 100.000 3203 0 0 1 3203 564143327 564146529 0.000000e+00 5915
1 TraesCS3D01G458900 chr3D 86.260 1230 158 8 997 2219 564128413 564129638 0.000000e+00 1325
2 TraesCS3D01G458900 chr3D 83.902 410 60 5 1063 1470 564889762 564890167 1.390000e-103 387
3 TraesCS3D01G458900 chr3D 82.574 373 49 11 1075 1442 568009049 568009410 6.670000e-82 315
4 TraesCS3D01G458900 chr3D 76.559 401 85 6 1075 1473 559580913 559580520 9.000000e-51 211
5 TraesCS3D01G458900 chr3D 76.429 280 62 4 1916 2193 564908932 564908655 7.160000e-32 148
6 TraesCS3D01G458900 chr3D 84.667 150 17 4 2274 2421 564129662 564129807 9.260000e-31 145
7 TraesCS3D01G458900 chr3D 74.194 279 66 5 1919 2194 565070915 565070640 9.390000e-21 111
8 TraesCS3D01G458900 chr3A 93.756 2002 81 14 866 2840 698733084 698735068 0.000000e+00 2964
9 TraesCS3D01G458900 chr3A 85.884 1431 184 12 997 2421 698710566 698711984 0.000000e+00 1507
10 TraesCS3D01G458900 chr3A 88.552 297 7 5 2932 3203 698735065 698735359 5.120000e-88 335
11 TraesCS3D01G458900 chr3A 89.109 101 9 2 2675 2774 698714169 698714268 1.210000e-24 124
12 TraesCS3D01G458900 chr3B 95.465 1279 51 5 1568 2840 751913702 751914979 0.000000e+00 2034
13 TraesCS3D01G458900 chr3B 85.212 1792 208 31 676 2421 751751054 751752834 0.000000e+00 1788
14 TraesCS3D01G458900 chr3B 89.029 875 73 9 1079 1944 751760806 751761666 0.000000e+00 1062
15 TraesCS3D01G458900 chr3B 90.312 320 22 3 1939 2249 751778981 751779300 8.270000e-111 411
16 TraesCS3D01G458900 chr3B 84.279 458 20 19 765 1195 751839722 751840154 1.790000e-107 399
17 TraesCS3D01G458900 chr3B 90.809 272 3 3 2932 3203 751914976 751915225 8.510000e-91 344
18 TraesCS3D01G458900 chr3B 78.571 378 70 7 1073 1446 751511282 751510912 4.130000e-59 239
19 TraesCS3D01G458900 chr3B 81.333 300 43 13 2487 2774 751752975 751753273 6.910000e-57 231
20 TraesCS3D01G458900 chr3B 81.250 272 42 7 1916 2184 752345150 752345415 9.000000e-51 211
21 TraesCS3D01G458900 chr3B 77.739 283 51 11 1916 2191 752523804 752523527 2.560000e-36 163
22 TraesCS3D01G458900 chr2D 99.168 601 5 0 1 601 602229094 602228494 0.000000e+00 1083
23 TraesCS3D01G458900 chr5D 98.336 601 9 1 1 601 247326485 247327084 0.000000e+00 1053
24 TraesCS3D01G458900 chr5D 97.256 583 16 0 1 583 380183927 380184509 0.000000e+00 989
25 TraesCS3D01G458900 chr7D 97.084 583 13 2 1 583 596106075 596106653 0.000000e+00 979
26 TraesCS3D01G458900 chr7D 93.300 597 38 2 4 599 604398307 604397712 0.000000e+00 880
27 TraesCS3D01G458900 chr7D 90.452 597 55 2 4 599 12071723 12071128 0.000000e+00 785
28 TraesCS3D01G458900 chr7D 90.285 597 55 3 4 599 478781983 478781389 0.000000e+00 778
29 TraesCS3D01G458900 chr7D 88.982 599 66 0 1 599 109616545 109615947 0.000000e+00 741
30 TraesCS3D01G458900 chr6D 90.484 599 55 2 1 598 45662005 45662602 0.000000e+00 789
31 TraesCS3D01G458900 chr1B 97.980 99 2 0 2835 2933 526192413 526192315 4.250000e-39 172
32 TraesCS3D01G458900 chr1B 97.980 99 2 0 2837 2935 536657503 536657405 4.250000e-39 172
33 TraesCS3D01G458900 chr2B 97.030 101 3 0 2836 2936 584129499 584129399 1.530000e-38 171
34 TraesCS3D01G458900 chr2B 97.000 100 3 0 2836 2935 418953665 418953566 5.500000e-38 169
35 TraesCS3D01G458900 chr2B 94.444 108 5 1 2829 2936 403102849 403102743 7.110000e-37 165
36 TraesCS3D01G458900 chr2A 95.327 107 5 0 2831 2937 92494420 92494526 1.530000e-38 171
37 TraesCS3D01G458900 chr6B 95.283 106 5 0 2828 2933 654640754 654640649 5.500000e-38 169
38 TraesCS3D01G458900 chr7B 95.238 105 5 0 2833 2937 40404459 40404563 1.980000e-37 167
39 TraesCS3D01G458900 chr6A 96.078 102 4 0 2837 2938 380939710 380939811 1.980000e-37 167


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G458900 chr3D 564143327 564146529 3202 False 5915.0 5915 100.0000 1 3203 1 chr3D.!!$F1 3202
1 TraesCS3D01G458900 chr3D 564128413 564129807 1394 False 735.0 1325 85.4635 997 2421 2 chr3D.!!$F4 1424
2 TraesCS3D01G458900 chr3A 698733084 698735359 2275 False 1649.5 2964 91.1540 866 3203 2 chr3A.!!$F2 2337
3 TraesCS3D01G458900 chr3A 698710566 698714268 3702 False 815.5 1507 87.4965 997 2774 2 chr3A.!!$F1 1777
4 TraesCS3D01G458900 chr3B 751913702 751915225 1523 False 1189.0 2034 93.1370 1568 3203 2 chr3B.!!$F6 1635
5 TraesCS3D01G458900 chr3B 751760806 751761666 860 False 1062.0 1062 89.0290 1079 1944 1 chr3B.!!$F1 865
6 TraesCS3D01G458900 chr3B 751751054 751753273 2219 False 1009.5 1788 83.2725 676 2774 2 chr3B.!!$F5 2098
7 TraesCS3D01G458900 chr2D 602228494 602229094 600 True 1083.0 1083 99.1680 1 601 1 chr2D.!!$R1 600
8 TraesCS3D01G458900 chr5D 247326485 247327084 599 False 1053.0 1053 98.3360 1 601 1 chr5D.!!$F1 600
9 TraesCS3D01G458900 chr5D 380183927 380184509 582 False 989.0 989 97.2560 1 583 1 chr5D.!!$F2 582
10 TraesCS3D01G458900 chr7D 596106075 596106653 578 False 979.0 979 97.0840 1 583 1 chr7D.!!$F1 582
11 TraesCS3D01G458900 chr7D 604397712 604398307 595 True 880.0 880 93.3000 4 599 1 chr7D.!!$R4 595
12 TraesCS3D01G458900 chr7D 12071128 12071723 595 True 785.0 785 90.4520 4 599 1 chr7D.!!$R1 595
13 TraesCS3D01G458900 chr7D 478781389 478781983 594 True 778.0 778 90.2850 4 599 1 chr7D.!!$R3 595
14 TraesCS3D01G458900 chr7D 109615947 109616545 598 True 741.0 741 88.9820 1 599 1 chr7D.!!$R2 598
15 TraesCS3D01G458900 chr6D 45662005 45662602 597 False 789.0 789 90.4840 1 598 1 chr6D.!!$F1 597

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
648 649 0.03716 GTGCTCCGGGTAGGGAAAAA 59.963 55.0 0.0 0.0 41.52 1.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2538 2723 1.227823 CGTCCCTGCAGTTCCACAA 60.228 57.895 13.81 0.0 0.0 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
125 126 0.179084 GGCGATCCCGAATGACTTCA 60.179 55.000 0.00 0.00 38.22 3.02
601 602 1.360551 CCCGTCTCTAGTCGCCATG 59.639 63.158 0.00 0.00 0.00 3.66
602 603 1.360551 CCGTCTCTAGTCGCCATGG 59.639 63.158 7.63 7.63 0.00 3.66
603 604 1.384989 CCGTCTCTAGTCGCCATGGT 61.385 60.000 14.67 0.00 0.00 3.55
604 605 0.248661 CGTCTCTAGTCGCCATGGTG 60.249 60.000 19.75 19.75 0.00 4.17
605 606 0.103208 GTCTCTAGTCGCCATGGTGG 59.897 60.000 24.82 11.81 41.55 4.61
606 607 0.324368 TCTCTAGTCGCCATGGTGGT 60.324 55.000 24.82 14.86 40.46 4.16
607 608 0.103208 CTCTAGTCGCCATGGTGGTC 59.897 60.000 24.82 17.32 40.46 4.02
608 609 0.324368 TCTAGTCGCCATGGTGGTCT 60.324 55.000 24.82 22.57 40.46 3.85
609 610 0.103208 CTAGTCGCCATGGTGGTCTC 59.897 60.000 24.82 12.74 40.46 3.36
610 611 1.327690 TAGTCGCCATGGTGGTCTCC 61.328 60.000 24.82 8.31 40.46 3.71
611 612 3.399181 TCGCCATGGTGGTCTCCC 61.399 66.667 24.82 0.00 40.46 4.30
612 613 4.489771 CGCCATGGTGGTCTCCCC 62.490 72.222 18.06 0.00 40.46 4.81
613 614 3.338250 GCCATGGTGGTCTCCCCA 61.338 66.667 14.67 0.00 40.46 4.96
618 619 3.246880 GGTGGTCTCCCCAACCGT 61.247 66.667 0.00 0.00 46.10 4.83
619 620 3.546714 GGTGGTCTCCCCAACCGTG 62.547 68.421 0.00 0.00 46.10 4.94
620 621 2.122769 TGGTCTCCCCAACCGTGA 60.123 61.111 0.00 0.00 41.50 4.35
621 622 2.346365 GGTCTCCCCAACCGTGAC 59.654 66.667 0.00 0.00 0.00 3.67
622 623 2.214920 GGTCTCCCCAACCGTGACT 61.215 63.158 0.00 0.00 0.00 3.41
623 624 1.292541 GTCTCCCCAACCGTGACTC 59.707 63.158 0.00 0.00 0.00 3.36
624 625 1.155390 TCTCCCCAACCGTGACTCT 59.845 57.895 0.00 0.00 0.00 3.24
625 626 0.898789 TCTCCCCAACCGTGACTCTC 60.899 60.000 0.00 0.00 0.00 3.20
626 627 1.889530 CTCCCCAACCGTGACTCTCC 61.890 65.000 0.00 0.00 0.00 3.71
627 628 2.663196 CCCAACCGTGACTCTCCC 59.337 66.667 0.00 0.00 0.00 4.30
628 629 2.663196 CCAACCGTGACTCTCCCC 59.337 66.667 0.00 0.00 0.00 4.81
629 630 2.261671 CAACCGTGACTCTCCCCG 59.738 66.667 0.00 0.00 0.00 5.73
630 631 2.203596 AACCGTGACTCTCCCCGT 60.204 61.111 0.00 0.00 0.00 5.28
631 632 2.571216 AACCGTGACTCTCCCCGTG 61.571 63.158 0.00 0.00 0.00 4.94
632 633 4.436998 CCGTGACTCTCCCCGTGC 62.437 72.222 0.00 0.00 0.00 5.34
633 634 3.374402 CGTGACTCTCCCCGTGCT 61.374 66.667 0.00 0.00 0.00 4.40
634 635 2.574399 GTGACTCTCCCCGTGCTC 59.426 66.667 0.00 0.00 0.00 4.26
635 636 2.680352 TGACTCTCCCCGTGCTCC 60.680 66.667 0.00 0.00 0.00 4.70
636 637 3.827898 GACTCTCCCCGTGCTCCG 61.828 72.222 0.00 0.00 0.00 4.63
645 646 3.072468 CGTGCTCCGGGTAGGGAA 61.072 66.667 0.00 0.00 41.52 3.97
646 647 2.652095 CGTGCTCCGGGTAGGGAAA 61.652 63.158 0.00 0.00 41.52 3.13
647 648 1.681076 GTGCTCCGGGTAGGGAAAA 59.319 57.895 0.00 0.00 41.52 2.29
648 649 0.037160 GTGCTCCGGGTAGGGAAAAA 59.963 55.000 0.00 0.00 41.52 1.94
682 683 4.431416 AAGTGTGTACACAATTCCCAGA 57.569 40.909 30.26 4.43 45.03 3.86
683 684 4.134563 AAGTGTGTACACAATTCCCAGAC 58.865 43.478 30.26 15.63 45.03 3.51
697 698 3.843422 TCCCAGACAAATCCACACATTT 58.157 40.909 0.00 0.00 0.00 2.32
698 699 3.826157 TCCCAGACAAATCCACACATTTC 59.174 43.478 0.00 0.00 0.00 2.17
699 700 3.573538 CCCAGACAAATCCACACATTTCA 59.426 43.478 0.00 0.00 0.00 2.69
711 712 4.403432 CCACACATTTCAAATATCCAGCCT 59.597 41.667 0.00 0.00 0.00 4.58
716 717 9.420118 ACACATTTCAAATATCCAGCCTATTAA 57.580 29.630 0.00 0.00 0.00 1.40
730 731 7.503566 TCCAGCCTATTAAAATCCAATTCAGAG 59.496 37.037 0.00 0.00 0.00 3.35
767 784 9.304731 CCCATTAGAAATGTACACAATTCAATG 57.695 33.333 16.00 18.21 38.03 2.82
779 796 3.068024 ACAATTCAATGGACACGTGCTTT 59.932 39.130 17.22 1.91 0.00 3.51
782 799 2.571212 TCAATGGACACGTGCTTTTCT 58.429 42.857 17.22 0.00 0.00 2.52
793 810 2.155924 CGTGCTTTTCTTCTCTCCGAAC 59.844 50.000 0.00 0.00 0.00 3.95
797 814 3.372514 GCTTTTCTTCTCTCCGAACCATC 59.627 47.826 0.00 0.00 0.00 3.51
798 815 3.611766 TTTCTTCTCTCCGAACCATCC 57.388 47.619 0.00 0.00 0.00 3.51
859 877 1.449601 CGCCCGATTTACCAGCTGT 60.450 57.895 13.81 3.45 0.00 4.40
860 878 1.705337 CGCCCGATTTACCAGCTGTG 61.705 60.000 13.81 6.81 0.00 3.66
861 879 1.993369 GCCCGATTTACCAGCTGTGC 61.993 60.000 13.81 0.00 0.00 4.57
862 880 0.392998 CCCGATTTACCAGCTGTGCT 60.393 55.000 13.81 0.00 40.77 4.40
863 881 1.453155 CCGATTTACCAGCTGTGCTT 58.547 50.000 13.81 0.00 36.40 3.91
864 882 1.398390 CCGATTTACCAGCTGTGCTTC 59.602 52.381 13.81 2.15 36.40 3.86
877 915 3.679083 GCTGTGCTTCTCCGGTAACTAAT 60.679 47.826 0.00 0.00 0.00 1.73
878 916 4.113354 CTGTGCTTCTCCGGTAACTAATC 58.887 47.826 0.00 0.00 0.00 1.75
880 918 3.132467 GTGCTTCTCCGGTAACTAATCCT 59.868 47.826 0.00 0.00 0.00 3.24
922 962 5.383130 GGCGATTGTCTACTTTTCAAGTTC 58.617 41.667 0.00 0.00 42.81 3.01
975 1020 1.609555 TCTTTTTGTACGGCGGCATTT 59.390 42.857 13.24 0.00 0.00 2.32
979 1024 3.514362 GTACGGCGGCATTTGGGG 61.514 66.667 13.24 0.00 0.00 4.96
1262 1318 0.179127 ATAGTCCTCGACGACGACGA 60.179 55.000 20.18 20.18 43.81 4.20
1461 1517 2.613506 CGTGGTCCGTTTCAAGGCC 61.614 63.158 0.00 0.00 0.00 5.19
1507 1563 2.494059 CCGTTTTCTTCTTCTCTGGCA 58.506 47.619 0.00 0.00 0.00 4.92
1546 1602 1.135046 CGTGCTCTGTGACTCAACTG 58.865 55.000 0.00 0.00 0.00 3.16
1605 1661 2.048503 CCCGAGACCACCAACGAC 60.049 66.667 0.00 0.00 0.00 4.34
1650 1706 4.807039 GTGGTCGGCGGCGTGTAT 62.807 66.667 31.06 0.00 0.00 2.29
1741 1797 4.699257 CAGAGCAGCTTAAGGTTCATTTCT 59.301 41.667 3.96 0.00 0.00 2.52
1887 1952 1.217882 CAACGGAGAAACAGACGCTT 58.782 50.000 0.00 0.00 0.00 4.68
2001 2066 3.004171 AGACTGCGTCTACTACACTCTG 58.996 50.000 9.06 0.00 41.51 3.35
2038 2103 1.471684 CTTTCATCTGGAAGCACAGCC 59.528 52.381 0.00 0.00 38.36 4.85
2047 2112 1.612726 GGAAGCACAGCCTCAGTGATT 60.613 52.381 0.00 0.00 46.94 2.57
2164 2229 2.164422 CTCTCGAGCTACACCATCAACA 59.836 50.000 7.81 0.00 0.00 3.33
2198 2264 1.410153 ACTGGCCTCAAAACAAAGCTG 59.590 47.619 3.32 0.00 0.00 4.24
2257 2326 3.689161 GTGATTCCAATGACCGACAATGA 59.311 43.478 0.00 0.00 31.65 2.57
2314 2384 5.569630 GCAAAATCAGGTTGACTCTAGGAGA 60.570 44.000 1.31 0.00 33.32 3.71
2384 2454 1.771255 AGGAGGACATGTTATCAGCCC 59.229 52.381 0.00 0.00 0.00 5.19
2405 2475 7.313951 GCCCTTTGCTACATCTATTATGATC 57.686 40.000 0.00 0.00 36.87 2.92
2446 2581 6.434028 ACTTCTTAGCCATGCAATCTTGTTTA 59.566 34.615 0.00 0.00 0.00 2.01
2463 2602 8.261492 TCTTGTTTATTTTTGCTGCTGAAAAA 57.739 26.923 14.87 13.24 36.86 1.94
2535 2720 4.730966 TGTTTTAGAATTGCCCACTGGTA 58.269 39.130 0.00 0.00 0.00 3.25
2555 2740 1.620822 ATTTGTGGAACTGCAGGGAC 58.379 50.000 19.93 9.02 38.04 4.46
2798 4849 8.092687 GTCCTGTTCTTAAGTTATCAGGTGTTA 58.907 37.037 23.00 11.54 41.88 2.41
2839 4890 6.372659 CAGGCACAGAACATTAGTTTGATACT 59.627 38.462 0.00 0.00 38.30 2.12
2840 4891 6.595716 AGGCACAGAACATTAGTTTGATACTC 59.404 38.462 0.00 0.00 38.30 2.59
2841 4892 6.183360 GGCACAGAACATTAGTTTGATACTCC 60.183 42.308 0.00 0.00 38.30 3.85
2842 4893 6.183360 GCACAGAACATTAGTTTGATACTCCC 60.183 42.308 0.00 0.00 38.30 4.30
2843 4894 7.106239 CACAGAACATTAGTTTGATACTCCCT 58.894 38.462 0.00 0.00 38.30 4.20
2844 4895 7.278868 CACAGAACATTAGTTTGATACTCCCTC 59.721 40.741 0.00 0.00 38.30 4.30
2845 4896 6.763610 CAGAACATTAGTTTGATACTCCCTCC 59.236 42.308 0.00 0.00 38.30 4.30
2846 4897 5.277857 ACATTAGTTTGATACTCCCTCCG 57.722 43.478 0.00 0.00 38.33 4.63
2847 4898 4.715297 ACATTAGTTTGATACTCCCTCCGT 59.285 41.667 0.00 0.00 38.33 4.69
2848 4899 4.996788 TTAGTTTGATACTCCCTCCGTC 57.003 45.455 0.00 0.00 38.33 4.79
2849 4900 2.108970 AGTTTGATACTCCCTCCGTCC 58.891 52.381 0.00 0.00 28.23 4.79
2850 4901 1.138464 GTTTGATACTCCCTCCGTCCC 59.862 57.143 0.00 0.00 0.00 4.46
2851 4902 0.337082 TTGATACTCCCTCCGTCCCA 59.663 55.000 0.00 0.00 0.00 4.37
2852 4903 0.337082 TGATACTCCCTCCGTCCCAA 59.663 55.000 0.00 0.00 0.00 4.12
2853 4904 1.273381 TGATACTCCCTCCGTCCCAAA 60.273 52.381 0.00 0.00 0.00 3.28
2854 4905 1.835531 GATACTCCCTCCGTCCCAAAA 59.164 52.381 0.00 0.00 0.00 2.44
2855 4906 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
2856 4907 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
2857 4908 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
2858 4909 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
2859 4910 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
2860 4911 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
2861 4912 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
2862 4913 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
2863 4914 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
2864 4915 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
2865 4916 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
2866 4917 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
2867 4918 4.083484 CCGTCCCAAAATAAGTGTCTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
2868 4919 4.755123 CGTCCCAAAATAAGTGTCTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
2869 4920 5.238650 CGTCCCAAAATAAGTGTCTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
2870 4921 6.238648 CGTCCCAAAATAAGTGTCTCAACTTT 60.239 38.462 0.00 0.00 40.77 2.66
2871 4922 6.918022 GTCCCAAAATAAGTGTCTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
2872 4923 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
2873 4924 7.776030 TCCCAAAATAAGTGTCTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
2874 4925 7.860872 CCCAAAATAAGTGTCTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
2875 4926 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
2881 4932 7.768807 AGTGTCTCAACTTTGTACTAGATCT 57.231 36.000 0.00 0.00 0.00 2.75
2882 4933 8.865420 AGTGTCTCAACTTTGTACTAGATCTA 57.135 34.615 1.69 1.69 0.00 1.98
2883 4934 8.952278 AGTGTCTCAACTTTGTACTAGATCTAG 58.048 37.037 25.26 25.26 39.04 2.43
2885 4936 9.955102 TGTCTCAACTTTGTACTAGATCTAGTA 57.045 33.333 30.48 30.48 43.98 1.82
2909 4960 7.801716 ACAAATTTGTACTAAGCTCAAGACA 57.198 32.000 22.10 0.00 40.16 3.41
2910 4961 8.396272 ACAAATTTGTACTAAGCTCAAGACAT 57.604 30.769 22.10 0.00 40.16 3.06
2911 4962 8.850156 ACAAATTTGTACTAAGCTCAAGACATT 58.150 29.630 22.10 0.00 40.16 2.71
2912 4963 9.683069 CAAATTTGTACTAAGCTCAAGACATTT 57.317 29.630 10.15 0.00 0.00 2.32
2919 4970 9.774742 GTACTAAGCTCAAGACATTTATTTTGG 57.225 33.333 3.19 0.00 0.00 3.28
2920 4971 7.830739 ACTAAGCTCAAGACATTTATTTTGGG 58.169 34.615 3.19 0.00 0.00 4.12
2921 4972 6.916360 AAGCTCAAGACATTTATTTTGGGA 57.084 33.333 0.00 0.00 0.00 4.37
2922 4973 6.272822 AGCTCAAGACATTTATTTTGGGAC 57.727 37.500 0.00 0.00 0.00 4.46
2923 4974 5.774690 AGCTCAAGACATTTATTTTGGGACA 59.225 36.000 0.00 0.00 0.00 4.02
2924 4975 6.071728 AGCTCAAGACATTTATTTTGGGACAG 60.072 38.462 0.00 0.00 42.39 3.51
2925 4976 6.071952 GCTCAAGACATTTATTTTGGGACAGA 60.072 38.462 0.00 0.00 42.39 3.41
2926 4977 7.452880 TCAAGACATTTATTTTGGGACAGAG 57.547 36.000 0.00 0.00 42.39 3.35
2927 4978 6.434028 TCAAGACATTTATTTTGGGACAGAGG 59.566 38.462 0.00 0.00 42.39 3.69
2928 4979 5.264395 AGACATTTATTTTGGGACAGAGGG 58.736 41.667 0.00 0.00 42.39 4.30
2929 4980 5.015178 AGACATTTATTTTGGGACAGAGGGA 59.985 40.000 0.00 0.00 42.39 4.20
2930 4981 5.264395 ACATTTATTTTGGGACAGAGGGAG 58.736 41.667 0.00 0.00 42.39 4.30
2931 4982 5.222337 ACATTTATTTTGGGACAGAGGGAGT 60.222 40.000 0.00 0.00 42.39 3.85
2932 4983 6.011981 ACATTTATTTTGGGACAGAGGGAGTA 60.012 38.462 0.00 0.00 42.39 2.59
2933 4984 5.431179 TTATTTTGGGACAGAGGGAGTAC 57.569 43.478 0.00 0.00 42.39 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
605 606 1.186267 AGAGTCACGGTTGGGGAGAC 61.186 60.000 0.00 0.00 0.00 3.36
606 607 0.898789 GAGAGTCACGGTTGGGGAGA 60.899 60.000 0.00 0.00 0.00 3.71
607 608 1.592223 GAGAGTCACGGTTGGGGAG 59.408 63.158 0.00 0.00 0.00 4.30
608 609 1.911766 GGAGAGTCACGGTTGGGGA 60.912 63.158 0.00 0.00 0.00 4.81
609 610 2.663196 GGAGAGTCACGGTTGGGG 59.337 66.667 0.00 0.00 0.00 4.96
610 611 2.663196 GGGAGAGTCACGGTTGGG 59.337 66.667 0.00 0.00 0.00 4.12
611 612 2.663196 GGGGAGAGTCACGGTTGG 59.337 66.667 0.00 0.00 0.00 3.77
612 613 2.261671 CGGGGAGAGTCACGGTTG 59.738 66.667 0.00 0.00 0.00 3.77
613 614 2.203596 ACGGGGAGAGTCACGGTT 60.204 61.111 0.00 0.00 28.21 4.44
614 615 2.989824 CACGGGGAGAGTCACGGT 60.990 66.667 0.00 0.00 33.33 4.83
615 616 4.436998 GCACGGGGAGAGTCACGG 62.437 72.222 0.00 0.00 0.00 4.94
616 617 3.343788 GAGCACGGGGAGAGTCACG 62.344 68.421 0.00 0.00 0.00 4.35
617 618 2.574399 GAGCACGGGGAGAGTCAC 59.426 66.667 0.00 0.00 0.00 3.67
618 619 2.680352 GGAGCACGGGGAGAGTCA 60.680 66.667 0.00 0.00 0.00 3.41
619 620 3.827898 CGGAGCACGGGGAGAGTC 61.828 72.222 0.00 0.00 39.42 3.36
628 629 2.175035 TTTTCCCTACCCGGAGCACG 62.175 60.000 0.73 0.00 43.80 5.34
629 630 0.037160 TTTTTCCCTACCCGGAGCAC 59.963 55.000 0.73 0.00 32.13 4.40
630 631 2.465725 TTTTTCCCTACCCGGAGCA 58.534 52.632 0.73 0.00 32.13 4.26
647 648 9.046296 TGTGTACACACTTTTTGTTGAATTTTT 57.954 25.926 24.62 0.00 46.55 1.94
648 649 8.594881 TGTGTACACACTTTTTGTTGAATTTT 57.405 26.923 24.62 0.00 46.55 1.82
649 650 8.594881 TTGTGTACACACTTTTTGTTGAATTT 57.405 26.923 27.91 0.00 46.55 1.82
650 651 8.770438 ATTGTGTACACACTTTTTGTTGAATT 57.230 26.923 27.91 0.00 46.55 2.17
651 652 8.770438 AATTGTGTACACACTTTTTGTTGAAT 57.230 26.923 27.91 11.40 46.55 2.57
652 653 7.329717 GGAATTGTGTACACACTTTTTGTTGAA 59.670 33.333 27.91 9.50 46.55 2.69
653 654 6.809196 GGAATTGTGTACACACTTTTTGTTGA 59.191 34.615 27.91 10.03 46.55 3.18
654 655 6.035542 GGGAATTGTGTACACACTTTTTGTTG 59.964 38.462 27.91 0.00 46.55 3.33
655 656 6.103330 GGGAATTGTGTACACACTTTTTGTT 58.897 36.000 27.91 13.33 46.55 2.83
656 657 5.186021 TGGGAATTGTGTACACACTTTTTGT 59.814 36.000 27.91 7.66 46.55 2.83
657 658 5.655488 TGGGAATTGTGTACACACTTTTTG 58.345 37.500 27.91 0.00 46.55 2.44
658 659 5.654650 TCTGGGAATTGTGTACACACTTTTT 59.345 36.000 27.91 17.87 46.55 1.94
659 660 5.067283 GTCTGGGAATTGTGTACACACTTTT 59.933 40.000 27.91 20.18 46.55 2.27
660 661 4.578928 GTCTGGGAATTGTGTACACACTTT 59.421 41.667 27.91 22.53 46.55 2.66
661 662 4.134563 GTCTGGGAATTGTGTACACACTT 58.865 43.478 27.91 26.94 46.55 3.16
662 663 3.135712 TGTCTGGGAATTGTGTACACACT 59.864 43.478 27.91 20.15 46.55 3.55
663 664 3.472652 TGTCTGGGAATTGTGTACACAC 58.527 45.455 27.91 16.42 46.59 3.82
664 665 3.847671 TGTCTGGGAATTGTGTACACA 57.152 42.857 24.62 24.62 39.98 3.72
665 666 5.335661 GGATTTGTCTGGGAATTGTGTACAC 60.336 44.000 19.36 19.36 0.00 2.90
666 667 4.764823 GGATTTGTCTGGGAATTGTGTACA 59.235 41.667 0.00 0.00 0.00 2.90
667 668 4.764823 TGGATTTGTCTGGGAATTGTGTAC 59.235 41.667 0.00 0.00 0.00 2.90
668 669 4.764823 GTGGATTTGTCTGGGAATTGTGTA 59.235 41.667 0.00 0.00 0.00 2.90
669 670 3.573967 GTGGATTTGTCTGGGAATTGTGT 59.426 43.478 0.00 0.00 0.00 3.72
670 671 3.573538 TGTGGATTTGTCTGGGAATTGTG 59.426 43.478 0.00 0.00 0.00 3.33
671 672 3.573967 GTGTGGATTTGTCTGGGAATTGT 59.426 43.478 0.00 0.00 0.00 2.71
672 673 3.573538 TGTGTGGATTTGTCTGGGAATTG 59.426 43.478 0.00 0.00 0.00 2.32
673 674 3.843422 TGTGTGGATTTGTCTGGGAATT 58.157 40.909 0.00 0.00 0.00 2.17
674 675 3.524095 TGTGTGGATTTGTCTGGGAAT 57.476 42.857 0.00 0.00 0.00 3.01
675 676 3.524095 ATGTGTGGATTTGTCTGGGAA 57.476 42.857 0.00 0.00 0.00 3.97
676 677 3.524095 AATGTGTGGATTTGTCTGGGA 57.476 42.857 0.00 0.00 0.00 4.37
677 678 3.573538 TGAAATGTGTGGATTTGTCTGGG 59.426 43.478 0.00 0.00 0.00 4.45
678 679 4.852134 TGAAATGTGTGGATTTGTCTGG 57.148 40.909 0.00 0.00 0.00 3.86
679 680 8.991243 ATATTTGAAATGTGTGGATTTGTCTG 57.009 30.769 0.00 0.00 0.00 3.51
680 681 8.253113 GGATATTTGAAATGTGTGGATTTGTCT 58.747 33.333 0.00 0.00 0.00 3.41
681 682 8.034215 TGGATATTTGAAATGTGTGGATTTGTC 58.966 33.333 0.00 0.00 0.00 3.18
682 683 7.905265 TGGATATTTGAAATGTGTGGATTTGT 58.095 30.769 0.00 0.00 0.00 2.83
683 684 7.010738 GCTGGATATTTGAAATGTGTGGATTTG 59.989 37.037 0.00 0.00 0.00 2.32
697 698 9.653516 TTGGATTTTAATAGGCTGGATATTTGA 57.346 29.630 0.00 0.00 0.00 2.69
716 717 6.131972 TGAACTCTCCTCTGAATTGGATTT 57.868 37.500 0.00 0.00 0.00 2.17
730 731 3.914426 TTCTAATGGGCTGAACTCTCC 57.086 47.619 0.00 0.00 0.00 3.71
767 784 2.476997 GAGAGAAGAAAAGCACGTGTCC 59.523 50.000 18.38 0.57 0.00 4.02
779 796 1.831736 GGGATGGTTCGGAGAGAAGAA 59.168 52.381 0.00 0.00 39.95 2.52
782 799 0.981277 GGGGGATGGTTCGGAGAGAA 60.981 60.000 0.00 0.00 38.43 2.87
798 815 0.032117 GGATTCCAGGGAAAAGGGGG 60.032 60.000 4.63 0.00 37.69 5.40
803 821 2.242196 CAGCTAGGGATTCCAGGGAAAA 59.758 50.000 4.63 0.00 37.69 2.29
810 828 3.106986 GCGGCAGCTAGGGATTCCA 62.107 63.158 4.80 0.00 41.01 3.53
843 861 0.392998 AGCACAGCTGGTAAATCGGG 60.393 55.000 19.93 0.00 37.57 5.14
859 877 3.371965 AGGATTAGTTACCGGAGAAGCA 58.628 45.455 9.46 0.00 0.00 3.91
860 878 3.637694 AGAGGATTAGTTACCGGAGAAGC 59.362 47.826 9.46 0.00 0.00 3.86
861 879 5.595133 AGAAGAGGATTAGTTACCGGAGAAG 59.405 44.000 9.46 0.00 0.00 2.85
862 880 5.516984 AGAAGAGGATTAGTTACCGGAGAA 58.483 41.667 9.46 0.00 0.00 2.87
863 881 5.126699 AGAAGAGGATTAGTTACCGGAGA 57.873 43.478 9.46 0.00 0.00 3.71
864 882 4.278919 GGAGAAGAGGATTAGTTACCGGAG 59.721 50.000 9.46 0.00 0.00 4.63
975 1020 2.035626 GCTAGCTGCAAACCCCCA 59.964 61.111 7.70 0.00 42.31 4.96
979 1024 1.082690 GACTCAGCTAGCTGCAAACC 58.917 55.000 35.21 19.45 45.94 3.27
1020 1075 2.048503 AAAGGCGTCGGAACCTCG 60.049 61.111 1.60 0.00 34.31 4.63
1262 1318 3.764466 CGTCGCTCTGGAAGGCCT 61.764 66.667 0.00 0.00 34.31 5.19
1507 1563 1.610102 GGTGAGATTGTGCAGAGTGCT 60.610 52.381 0.00 0.00 45.31 4.40
1546 1602 3.127030 GGAACTGCTGTGTAATACTTGCC 59.873 47.826 0.00 0.00 0.00 4.52
1605 1661 7.576236 CCTTCCTCATGTAATTGTAAATAGCG 58.424 38.462 0.00 0.00 0.00 4.26
1741 1797 3.875134 GGGTCGACAGAGAAAAACTTGAA 59.125 43.478 18.91 0.00 0.00 2.69
2001 2066 4.612943 TGAAAGCAAATTTACCAACGTCC 58.387 39.130 0.00 0.00 0.00 4.79
2038 2103 5.117584 CCTCTCATCTTTCCAATCACTGAG 58.882 45.833 0.00 0.00 0.00 3.35
2047 2112 3.394274 TCAAACACCCTCTCATCTTTCCA 59.606 43.478 0.00 0.00 0.00 3.53
2198 2264 3.128764 GCTAGATTTGTTGGCACCTTACC 59.871 47.826 0.00 0.00 0.00 2.85
2257 2326 7.054491 AGTCAAGGCAAAACAAAAGACATAT 57.946 32.000 0.00 0.00 0.00 1.78
2384 2454 8.326713 GCATCGATCATAATAGATGTAGCAAAG 58.673 37.037 0.00 0.00 43.24 2.77
2405 2475 7.486551 GGCTAAGAAGTACAATAGATAGCATCG 59.513 40.741 13.60 0.00 36.98 3.84
2446 2581 4.581409 AGCCAATTTTTCAGCAGCAAAAAT 59.419 33.333 9.38 9.38 42.59 1.82
2484 2623 1.923204 CGCTGGAACGAGAATTCAGAG 59.077 52.381 8.44 0.82 34.06 3.35
2535 2720 1.963515 GTCCCTGCAGTTCCACAAATT 59.036 47.619 13.81 0.00 0.00 1.82
2538 2723 1.227823 CGTCCCTGCAGTTCCACAA 60.228 57.895 13.81 0.00 0.00 3.33
2555 2740 5.637810 TGAAAGATTACAGTGTTCTAAGCCG 59.362 40.000 0.00 0.00 0.00 5.52
2798 4849 3.441572 GTGCCTGCTGTTGTATTCTCATT 59.558 43.478 0.00 0.00 0.00 2.57
2839 4890 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
2840 4891 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
2841 4892 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
2842 4893 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
2843 4894 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
2844 4895 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
2845 4896 4.755123 AGTTGAGACACTTATTTTGGGACG 59.245 41.667 0.00 0.00 0.00 4.79
2846 4897 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
2847 4898 6.605594 ACAAAGTTGAGACACTTATTTTGGGA 59.394 34.615 0.00 0.00 35.87 4.37
2848 4899 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
2849 4900 8.621286 AGTACAAAGTTGAGACACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
2855 4906 9.298250 AGATCTAGTACAAAGTTGAGACACTTA 57.702 33.333 0.00 0.00 35.87 2.24
2856 4907 8.184304 AGATCTAGTACAAAGTTGAGACACTT 57.816 34.615 0.00 0.00 38.74 3.16
2857 4908 7.768807 AGATCTAGTACAAAGTTGAGACACT 57.231 36.000 0.00 0.00 0.00 3.55
2858 4909 8.732531 ACTAGATCTAGTACAAAGTTGAGACAC 58.267 37.037 29.94 0.00 43.98 3.67
2859 4910 8.865420 ACTAGATCTAGTACAAAGTTGAGACA 57.135 34.615 29.94 0.00 43.98 3.41
2884 4935 8.896320 TGTCTTGAGCTTAGTACAAATTTGTA 57.104 30.769 23.91 23.91 42.35 2.41
2885 4936 7.801716 TGTCTTGAGCTTAGTACAAATTTGT 57.198 32.000 25.99 25.99 44.86 2.83
2886 4937 9.683069 AAATGTCTTGAGCTTAGTACAAATTTG 57.317 29.630 16.67 16.67 0.00 2.32
2893 4944 9.774742 CCAAAATAAATGTCTTGAGCTTAGTAC 57.225 33.333 0.00 0.00 0.00 2.73
2894 4945 8.956426 CCCAAAATAAATGTCTTGAGCTTAGTA 58.044 33.333 0.00 0.00 0.00 1.82
2895 4946 7.669722 TCCCAAAATAAATGTCTTGAGCTTAGT 59.330 33.333 0.00 0.00 0.00 2.24
2896 4947 7.970614 GTCCCAAAATAAATGTCTTGAGCTTAG 59.029 37.037 0.00 0.00 0.00 2.18
2897 4948 7.450014 TGTCCCAAAATAAATGTCTTGAGCTTA 59.550 33.333 0.00 0.00 0.00 3.09
2898 4949 6.267471 TGTCCCAAAATAAATGTCTTGAGCTT 59.733 34.615 0.00 0.00 0.00 3.74
2899 4950 5.774690 TGTCCCAAAATAAATGTCTTGAGCT 59.225 36.000 0.00 0.00 0.00 4.09
2900 4951 6.024552 TGTCCCAAAATAAATGTCTTGAGC 57.975 37.500 0.00 0.00 0.00 4.26
2901 4952 7.362401 CCTCTGTCCCAAAATAAATGTCTTGAG 60.362 40.741 0.00 0.00 0.00 3.02
2902 4953 6.434028 CCTCTGTCCCAAAATAAATGTCTTGA 59.566 38.462 0.00 0.00 0.00 3.02
2903 4954 6.350445 CCCTCTGTCCCAAAATAAATGTCTTG 60.350 42.308 0.00 0.00 0.00 3.02
2904 4955 5.716703 CCCTCTGTCCCAAAATAAATGTCTT 59.283 40.000 0.00 0.00 0.00 3.01
2905 4956 5.015178 TCCCTCTGTCCCAAAATAAATGTCT 59.985 40.000 0.00 0.00 0.00 3.41
2906 4957 5.261216 TCCCTCTGTCCCAAAATAAATGTC 58.739 41.667 0.00 0.00 0.00 3.06
2907 4958 5.222337 ACTCCCTCTGTCCCAAAATAAATGT 60.222 40.000 0.00 0.00 0.00 2.71
2908 4959 5.264395 ACTCCCTCTGTCCCAAAATAAATG 58.736 41.667 0.00 0.00 0.00 2.32
2909 4960 5.536497 ACTCCCTCTGTCCCAAAATAAAT 57.464 39.130 0.00 0.00 0.00 1.40
2910 4961 5.550403 AGTACTCCCTCTGTCCCAAAATAAA 59.450 40.000 0.00 0.00 0.00 1.40
2911 4962 5.098663 AGTACTCCCTCTGTCCCAAAATAA 58.901 41.667 0.00 0.00 0.00 1.40
2912 4963 4.695606 AGTACTCCCTCTGTCCCAAAATA 58.304 43.478 0.00 0.00 0.00 1.40
2913 4964 3.532102 AGTACTCCCTCTGTCCCAAAAT 58.468 45.455 0.00 0.00 0.00 1.82
2914 4965 2.986050 AGTACTCCCTCTGTCCCAAAA 58.014 47.619 0.00 0.00 0.00 2.44
2915 4966 2.715763 AGTACTCCCTCTGTCCCAAA 57.284 50.000 0.00 0.00 0.00 3.28
2916 4967 2.637872 CAAAGTACTCCCTCTGTCCCAA 59.362 50.000 0.00 0.00 0.00 4.12
2917 4968 2.257207 CAAAGTACTCCCTCTGTCCCA 58.743 52.381 0.00 0.00 0.00 4.37
2918 4969 1.555533 CCAAAGTACTCCCTCTGTCCC 59.444 57.143 0.00 0.00 0.00 4.46
2919 4970 2.537143 TCCAAAGTACTCCCTCTGTCC 58.463 52.381 0.00 0.00 0.00 4.02
2920 4971 3.306849 GGTTCCAAAGTACTCCCTCTGTC 60.307 52.174 0.00 0.00 0.00 3.51
2921 4972 2.638363 GGTTCCAAAGTACTCCCTCTGT 59.362 50.000 0.00 0.00 0.00 3.41
2922 4973 2.907042 AGGTTCCAAAGTACTCCCTCTG 59.093 50.000 0.00 0.00 0.00 3.35
2923 4974 3.277416 AGGTTCCAAAGTACTCCCTCT 57.723 47.619 0.00 0.00 0.00 3.69
2924 4975 3.326880 TCAAGGTTCCAAAGTACTCCCTC 59.673 47.826 0.00 0.00 0.00 4.30
2925 4976 3.072622 GTCAAGGTTCCAAAGTACTCCCT 59.927 47.826 0.00 0.00 0.00 4.20
2926 4977 3.181448 TGTCAAGGTTCCAAAGTACTCCC 60.181 47.826 0.00 0.00 0.00 4.30
2927 4978 4.081322 TGTCAAGGTTCCAAAGTACTCC 57.919 45.455 0.00 0.00 0.00 3.85
2928 4979 5.007724 CACTTGTCAAGGTTCCAAAGTACTC 59.992 44.000 16.85 0.00 0.00 2.59
2929 4980 4.881850 CACTTGTCAAGGTTCCAAAGTACT 59.118 41.667 16.85 0.00 0.00 2.73
2930 4981 4.036380 CCACTTGTCAAGGTTCCAAAGTAC 59.964 45.833 16.85 0.00 0.00 2.73
2931 4982 4.204012 CCACTTGTCAAGGTTCCAAAGTA 58.796 43.478 16.85 0.00 0.00 2.24
2932 4983 3.023832 CCACTTGTCAAGGTTCCAAAGT 58.976 45.455 16.85 0.00 0.00 2.66
2933 4984 2.362077 CCCACTTGTCAAGGTTCCAAAG 59.638 50.000 16.85 0.00 0.00 2.77
3022 5076 4.157656 CGGATCCATTCCAACAAGCTAAAA 59.842 41.667 13.41 0.00 45.78 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.