Multiple sequence alignment - TraesCS3D01G455500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G455500 chr3D 100.000 4160 0 0 1 4160 561700313 561704472 0.000000e+00 7683.0
1 TraesCS3D01G455500 chr3D 81.368 687 110 13 964 1637 609291642 609290961 1.020000e-150 544.0
2 TraesCS3D01G455500 chr3B 94.085 2857 158 4 761 3611 748988995 748991846 0.000000e+00 4329.0
3 TraesCS3D01G455500 chr3B 92.464 491 37 0 1 491 748988297 748988787 0.000000e+00 702.0
4 TraesCS3D01G455500 chr3B 82.511 446 76 2 2640 3084 820336380 820335936 1.400000e-104 390.0
5 TraesCS3D01G455500 chr3B 90.310 258 20 4 478 735 748988747 748988999 2.400000e-87 333.0
6 TraesCS3D01G455500 chr3B 80.392 255 48 2 2669 2923 819304072 819304324 4.240000e-45 193.0
7 TraesCS3D01G455500 chr3B 91.860 86 2 1 4073 4158 748995603 748995683 9.450000e-22 115.0
8 TraesCS3D01G455500 chr3B 72.945 292 74 2 2154 2445 820287790 820287504 3.420000e-16 97.1
9 TraesCS3D01G455500 chr1D 74.424 911 187 39 2188 3071 455749446 455750337 2.380000e-92 350.0
10 TraesCS3D01G455500 chr2B 77.951 449 90 8 2640 3084 4624464 4624907 5.300000e-69 272.0
11 TraesCS3D01G455500 chr3A 77.778 396 73 14 2649 3041 742336346 742336729 3.230000e-56 230.0
12 TraesCS3D01G455500 chr3A 74.648 284 65 4 2154 2435 743103177 743102899 7.310000e-23 119.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G455500 chr3D 561700313 561704472 4159 False 7683.00 7683 100.00000 1 4160 1 chr3D.!!$F1 4159
1 TraesCS3D01G455500 chr3D 609290961 609291642 681 True 544.00 544 81.36800 964 1637 1 chr3D.!!$R1 673
2 TraesCS3D01G455500 chr3B 748988297 748995683 7386 False 1369.75 4329 92.17975 1 4158 4 chr3B.!!$F2 4157
3 TraesCS3D01G455500 chr1D 455749446 455750337 891 False 350.00 350 74.42400 2188 3071 1 chr1D.!!$F1 883

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
386 387 0.108207 GGCTAGCTCCATCACATGCT 59.892 55.0 15.72 0.0 39.30 3.79 F
1990 1999 0.248336 CGTGCTGTGCATATTGCTGG 60.248 55.0 0.00 0.0 45.31 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2216 2225 0.472471 TTTCCGAAGTTGTGGCCTCT 59.528 50.0 3.32 0.0 0.00 3.69 R
3722 3751 0.034186 TTGCAGCTTGGACCATAGGG 60.034 55.0 0.00 0.0 41.29 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 62 3.394674 TGTCGCTTGTATGGTTCTTCA 57.605 42.857 0.00 0.00 0.00 3.02
65 66 2.716217 GCTTGTATGGTTCTTCAGCCT 58.284 47.619 0.00 0.00 0.00 4.58
82 83 1.743394 GCCTGGTTTCCCTCATAAACG 59.257 52.381 0.00 0.00 37.64 3.60
84 85 2.365582 CTGGTTTCCCTCATAAACGGG 58.634 52.381 0.00 0.00 42.05 5.28
104 105 6.822442 ACGGGATCAATTTGTTTAGGTTTTT 58.178 32.000 0.00 0.00 0.00 1.94
108 109 9.283768 GGGATCAATTTGTTTAGGTTTTTGATT 57.716 29.630 0.00 0.00 33.72 2.57
112 113 8.825745 TCAATTTGTTTAGGTTTTTGATTCAGC 58.174 29.630 0.00 0.00 0.00 4.26
127 128 7.630242 TTGATTCAGCTTCCCTTATAAACTG 57.370 36.000 0.00 0.00 0.00 3.16
133 134 6.101734 TCAGCTTCCCTTATAAACTGGATCAT 59.898 38.462 0.00 0.00 0.00 2.45
144 145 9.547753 TTATAAACTGGATCATTCTCTTAGTGC 57.452 33.333 0.00 0.00 0.00 4.40
162 163 2.095059 GTGCATGGCCAACTTTGAGTAG 60.095 50.000 10.96 0.00 0.00 2.57
199 200 0.952659 ACTCCCTCCCATATCACCCT 59.047 55.000 0.00 0.00 0.00 4.34
244 245 3.656651 TGCAAGCGTCTTTGATATTCG 57.343 42.857 0.00 0.00 0.00 3.34
329 330 3.542969 ATTTAACTTGGGCAGGAAGGT 57.457 42.857 0.00 0.00 0.00 3.50
357 358 6.514541 GCATGCATCTTGTGTGCTAGATAATT 60.515 38.462 14.21 0.00 42.92 1.40
386 387 0.108207 GGCTAGCTCCATCACATGCT 59.892 55.000 15.72 0.00 39.30 3.79
406 407 6.584471 TGCTTAATCCTAAAAGGGTATGGA 57.416 37.500 0.00 0.00 35.59 3.41
471 472 8.907222 TGTTACTTTATAAAGGTTCTCCGTTT 57.093 30.769 25.25 6.54 40.31 3.60
473 474 8.992073 GTTACTTTATAAAGGTTCTCCGTTTCA 58.008 33.333 25.25 0.00 40.31 2.69
477 478 3.570912 AAAGGTTCTCCGTTTCAAGGA 57.429 42.857 0.00 0.00 39.05 3.36
478 479 2.545537 AGGTTCTCCGTTTCAAGGAC 57.454 50.000 0.00 0.00 39.05 3.85
479 480 2.047830 AGGTTCTCCGTTTCAAGGACT 58.952 47.619 0.00 0.00 39.05 3.85
480 481 2.438392 AGGTTCTCCGTTTCAAGGACTT 59.562 45.455 0.00 0.00 39.05 3.01
481 482 3.118000 AGGTTCTCCGTTTCAAGGACTTT 60.118 43.478 0.00 0.00 39.05 2.66
482 483 4.102054 AGGTTCTCCGTTTCAAGGACTTTA 59.898 41.667 0.00 0.00 39.05 1.85
483 484 5.001874 GGTTCTCCGTTTCAAGGACTTTAT 58.998 41.667 0.00 0.00 33.58 1.40
484 485 5.121925 GGTTCTCCGTTTCAAGGACTTTATC 59.878 44.000 0.00 0.00 33.58 1.75
485 486 5.477607 TCTCCGTTTCAAGGACTTTATCA 57.522 39.130 0.00 0.00 33.58 2.15
486 487 5.860611 TCTCCGTTTCAAGGACTTTATCAA 58.139 37.500 0.00 0.00 33.58 2.57
487 488 6.292923 TCTCCGTTTCAAGGACTTTATCAAA 58.707 36.000 0.00 0.00 33.58 2.69
488 489 6.426937 TCTCCGTTTCAAGGACTTTATCAAAG 59.573 38.462 0.00 0.00 44.10 2.77
489 490 5.472137 TCCGTTTCAAGGACTTTATCAAAGG 59.528 40.000 3.88 0.00 42.82 3.11
490 491 5.240844 CCGTTTCAAGGACTTTATCAAAGGT 59.759 40.000 3.88 0.00 42.82 3.50
491 492 6.238925 CCGTTTCAAGGACTTTATCAAAGGTT 60.239 38.462 3.88 0.00 42.82 3.50
492 493 6.856426 CGTTTCAAGGACTTTATCAAAGGTTC 59.144 38.462 3.88 0.00 42.82 3.62
493 494 6.894339 TTCAAGGACTTTATCAAAGGTTCC 57.106 37.500 3.88 2.75 42.82 3.62
494 495 5.321927 TCAAGGACTTTATCAAAGGTTCCC 58.678 41.667 3.88 0.36 42.82 3.97
495 496 5.074515 TCAAGGACTTTATCAAAGGTTCCCT 59.925 40.000 3.88 2.30 42.82 4.20
496 497 6.273730 TCAAGGACTTTATCAAAGGTTCCCTA 59.726 38.462 3.88 0.00 42.82 3.53
497 498 6.713731 AGGACTTTATCAAAGGTTCCCTAA 57.286 37.500 3.88 0.00 42.82 2.69
498 499 7.098845 AGGACTTTATCAAAGGTTCCCTAAA 57.901 36.000 3.88 0.00 42.82 1.85
499 500 7.709601 AGGACTTTATCAAAGGTTCCCTAAAT 58.290 34.615 3.88 0.00 42.82 1.40
500 501 8.842764 AGGACTTTATCAAAGGTTCCCTAAATA 58.157 33.333 3.88 0.00 42.82 1.40
501 502 9.470399 GGACTTTATCAAAGGTTCCCTAAATAA 57.530 33.333 3.88 0.00 42.82 1.40
547 548 6.656270 ACATATATCACACACATGGCTAATGG 59.344 38.462 0.00 0.00 40.94 3.16
576 577 0.880278 TTGAGCGAGTGAGTTGGTGC 60.880 55.000 0.00 0.00 0.00 5.01
583 584 2.875933 CGAGTGAGTTGGTGCCTTTTAA 59.124 45.455 0.00 0.00 0.00 1.52
629 630 0.689080 ATCCGATCCAGTGGAGCACT 60.689 55.000 26.25 5.38 46.51 4.40
638 639 0.894141 AGTGGAGCACTAGTGAGCTG 59.106 55.000 27.08 0.00 43.46 4.24
657 658 0.386858 GCGCTCTTCGTAGTGTGACA 60.387 55.000 0.00 0.00 41.07 3.58
658 659 1.328439 CGCTCTTCGTAGTGTGACAC 58.672 55.000 7.83 7.83 34.10 3.67
659 660 4.820090 GCGCTCTTCGTAGTGTGACACT 62.820 54.545 22.93 22.93 42.34 3.55
660 661 2.159037 CGCTCTTCGTAGTGTGACACTA 59.841 50.000 20.65 20.65 43.46 2.74
696 697 2.485426 GCTACTGTGTGAGGTACGTACA 59.515 50.000 26.02 6.00 0.00 2.90
700 701 3.243301 ACTGTGTGAGGTACGTACAAGTG 60.243 47.826 26.02 10.20 31.74 3.16
701 702 2.056577 GTGTGAGGTACGTACAAGTGC 58.943 52.381 26.02 9.22 31.74 4.40
724 725 6.423905 TGCGAACTATTTCACCTAGATTATGC 59.576 38.462 0.00 0.00 0.00 3.14
733 734 5.765510 TCACCTAGATTATGCCCATGTTTT 58.234 37.500 0.00 0.00 0.00 2.43
734 735 5.593909 TCACCTAGATTATGCCCATGTTTTG 59.406 40.000 0.00 0.00 0.00 2.44
735 736 4.342092 ACCTAGATTATGCCCATGTTTTGC 59.658 41.667 0.00 0.00 0.00 3.68
736 737 4.586001 CCTAGATTATGCCCATGTTTTGCT 59.414 41.667 0.00 0.00 0.00 3.91
737 738 5.769662 CCTAGATTATGCCCATGTTTTGCTA 59.230 40.000 0.00 0.00 0.00 3.49
738 739 5.520376 AGATTATGCCCATGTTTTGCTAC 57.480 39.130 0.00 0.00 0.00 3.58
739 740 4.342092 AGATTATGCCCATGTTTTGCTACC 59.658 41.667 0.00 0.00 0.00 3.18
740 741 1.935799 ATGCCCATGTTTTGCTACCA 58.064 45.000 0.00 0.00 0.00 3.25
741 742 1.935799 TGCCCATGTTTTGCTACCAT 58.064 45.000 0.00 0.00 0.00 3.55
742 743 2.255406 TGCCCATGTTTTGCTACCATT 58.745 42.857 0.00 0.00 0.00 3.16
743 744 3.435275 TGCCCATGTTTTGCTACCATTA 58.565 40.909 0.00 0.00 0.00 1.90
744 745 3.834813 TGCCCATGTTTTGCTACCATTAA 59.165 39.130 0.00 0.00 0.00 1.40
745 746 4.180817 GCCCATGTTTTGCTACCATTAAC 58.819 43.478 0.00 0.00 0.00 2.01
746 747 4.081697 GCCCATGTTTTGCTACCATTAACT 60.082 41.667 0.00 0.00 0.00 2.24
747 748 5.650543 CCCATGTTTTGCTACCATTAACTC 58.349 41.667 0.00 0.00 0.00 3.01
748 749 5.331902 CCATGTTTTGCTACCATTAACTCG 58.668 41.667 0.00 0.00 0.00 4.18
749 750 5.106317 CCATGTTTTGCTACCATTAACTCGT 60.106 40.000 0.00 0.00 0.00 4.18
750 751 6.378582 CATGTTTTGCTACCATTAACTCGTT 58.621 36.000 0.00 0.00 0.00 3.85
751 752 6.380095 TGTTTTGCTACCATTAACTCGTTT 57.620 33.333 0.00 0.00 0.00 3.60
752 753 6.797454 TGTTTTGCTACCATTAACTCGTTTT 58.203 32.000 0.00 0.00 0.00 2.43
753 754 6.693545 TGTTTTGCTACCATTAACTCGTTTTG 59.306 34.615 0.00 0.00 0.00 2.44
754 755 4.413495 TGCTACCATTAACTCGTTTTGC 57.587 40.909 0.00 0.00 0.00 3.68
755 756 4.069304 TGCTACCATTAACTCGTTTTGCT 58.931 39.130 0.00 0.00 0.00 3.91
756 757 5.239351 TGCTACCATTAACTCGTTTTGCTA 58.761 37.500 0.00 0.00 0.00 3.49
757 758 5.121142 TGCTACCATTAACTCGTTTTGCTAC 59.879 40.000 0.00 0.00 0.00 3.58
758 759 5.446875 GCTACCATTAACTCGTTTTGCTACC 60.447 44.000 0.00 0.00 0.00 3.18
759 760 4.391155 ACCATTAACTCGTTTTGCTACCA 58.609 39.130 0.00 0.00 0.00 3.25
760 761 5.007682 ACCATTAACTCGTTTTGCTACCAT 58.992 37.500 0.00 0.00 0.00 3.55
761 762 5.475564 ACCATTAACTCGTTTTGCTACCATT 59.524 36.000 0.00 0.00 0.00 3.16
762 763 5.799936 CCATTAACTCGTTTTGCTACCATTG 59.200 40.000 0.00 0.00 0.00 2.82
789 790 8.420222 TGAGTTTGATCTATCAGGATTCTTCTC 58.580 37.037 0.00 0.00 38.19 2.87
803 804 7.718753 CAGGATTCTTCTCTTGTGCCTAATAAT 59.281 37.037 0.00 0.00 0.00 1.28
804 805 7.718753 AGGATTCTTCTCTTGTGCCTAATAATG 59.281 37.037 0.00 0.00 0.00 1.90
814 815 3.486841 GTGCCTAATAATGTTGCAATGCG 59.513 43.478 0.59 0.00 33.11 4.73
825 826 2.555782 CAATGCGTGTGGTGGTCG 59.444 61.111 0.00 0.00 0.00 4.79
844 845 6.018016 GTGGTCGGTCTAGTCTAGTTTAGATC 60.018 46.154 6.77 7.48 37.13 2.75
845 846 6.126825 TGGTCGGTCTAGTCTAGTTTAGATCT 60.127 42.308 6.77 0.00 37.13 2.75
882 883 5.996513 AGATCACATCAGCCTTGATTGTATC 59.003 40.000 0.00 0.00 42.12 2.24
1011 1020 4.168760 GCAACAGATAGATGGCAAACAAC 58.831 43.478 0.00 0.00 0.00 3.32
1016 1025 4.216042 CAGATAGATGGCAAACAACACACA 59.784 41.667 0.00 0.00 0.00 3.72
1017 1026 4.826733 AGATAGATGGCAAACAACACACAA 59.173 37.500 0.00 0.00 0.00 3.33
1079 1088 0.835941 ATCCTAGAAGCAGCCACCTG 59.164 55.000 0.00 0.00 42.13 4.00
1098 1107 2.674852 CTGTGGTGATTCCTCGTCAATG 59.325 50.000 0.00 0.00 37.07 2.82
1234 1243 2.047002 ACTAGAGCGGTCTCTCCTTC 57.953 55.000 22.33 0.00 46.32 3.46
1254 1263 1.150827 CAGATGTCAACTGCGAGCAA 58.849 50.000 0.00 0.00 0.00 3.91
1315 1324 4.335416 CCCTTTGGCTTCAGATTTACTCA 58.665 43.478 0.00 0.00 0.00 3.41
1349 1358 3.922171 AGAAGAAGAATTGAGGCGGAT 57.078 42.857 0.00 0.00 0.00 4.18
1362 1371 2.289002 GAGGCGGATAATCTTGCAACAG 59.711 50.000 0.00 0.00 0.00 3.16
1386 1395 2.609459 CAGGTATGGATTCAACGCACTC 59.391 50.000 0.00 0.00 0.00 3.51
1446 1455 2.169352 GGAGTTGATAGAAGCAGAGCCA 59.831 50.000 0.00 0.00 0.00 4.75
1469 1478 0.878523 CTGTCGAAAGCCGTGACCAA 60.879 55.000 0.00 0.00 39.75 3.67
1513 1522 3.358111 TGGCCGTGATGAGGAATTTTA 57.642 42.857 0.00 0.00 0.00 1.52
1527 1536 6.371548 TGAGGAATTTTACAGATGTTTCCGAG 59.628 38.462 7.98 0.00 36.70 4.63
1536 1545 4.872691 ACAGATGTTTCCGAGAAGCTATTG 59.127 41.667 0.00 0.00 0.00 1.90
1544 1553 1.002033 CGAGAAGCTATTGGCCATTGC 60.002 52.381 6.09 11.84 43.05 3.56
1609 1618 3.379372 TGCTGCAGCTAGAAATGGAAATC 59.621 43.478 36.61 5.10 42.66 2.17
1612 1621 5.451520 GCTGCAGCTAGAAATGGAAATCAAT 60.452 40.000 31.33 0.00 38.21 2.57
1678 1687 2.562738 TGTGCAGCAAACTAGCTCTAGA 59.437 45.455 10.63 0.00 44.54 2.43
1726 1735 8.148351 AGAGCTAGTGTAGTTCATGTGTTTTAA 58.852 33.333 0.00 0.00 38.34 1.52
1793 1802 7.492614 AATCGATTTTGCTACGTCATTTTTC 57.507 32.000 4.39 0.00 0.00 2.29
1813 1822 5.733620 TTCGTACCAAAGACTTGTCCTAT 57.266 39.130 0.00 0.00 0.00 2.57
1821 1830 6.070021 ACCAAAGACTTGTCCTATCATCATCA 60.070 38.462 0.00 0.00 0.00 3.07
1842 1851 2.002586 CTGTGCTCTTAACCCATCGTG 58.997 52.381 0.00 0.00 0.00 4.35
1861 1870 2.030540 GTGCATGCATGTCTTGACTTGT 60.031 45.455 25.64 0.00 0.00 3.16
1877 1886 4.155826 TGACTTGTTTTCAGATATTGCGGG 59.844 41.667 0.00 0.00 0.00 6.13
1885 1894 3.734463 TCAGATATTGCGGGCGAAATTA 58.266 40.909 0.00 0.00 0.00 1.40
1890 1899 0.736053 TTGCGGGCGAAATTATGGAC 59.264 50.000 0.00 0.00 0.00 4.02
1897 1906 3.422655 GGCGAAATTATGGACAAACGTC 58.577 45.455 0.00 0.00 0.00 4.34
1942 1951 4.905456 ACTCGGATGGGATTACTCCAATAA 59.095 41.667 1.05 0.00 44.08 1.40
1951 1960 6.331572 TGGGATTACTCCAATAAGAATGGCTA 59.668 38.462 1.05 0.00 44.08 3.93
1954 1963 9.959721 GGATTACTCCAATAAGAATGGCTATAA 57.040 33.333 0.00 0.00 41.64 0.98
1959 1968 9.780186 ACTCCAATAAGAATGGCTATAACTTAC 57.220 33.333 10.22 0.00 37.88 2.34
1978 1987 0.595053 CGACAAGTCTGACGTGCTGT 60.595 55.000 21.00 13.70 36.23 4.40
1979 1988 0.855349 GACAAGTCTGACGTGCTGTG 59.145 55.000 21.00 7.98 30.59 3.66
1982 1991 0.250038 AAGTCTGACGTGCTGTGCAT 60.250 50.000 0.00 0.00 41.91 3.96
1990 1999 0.248336 CGTGCTGTGCATATTGCTGG 60.248 55.000 0.00 0.00 45.31 4.85
1993 2002 2.100252 GTGCTGTGCATATTGCTGGAAT 59.900 45.455 0.00 0.00 45.31 3.01
2027 2036 6.876789 TCTTTAGCATATGAAACCGACAAGAA 59.123 34.615 6.97 0.00 0.00 2.52
2049 2058 4.061131 TGGTTATCCTCTCCTCTGTTCA 57.939 45.455 0.00 0.00 34.23 3.18
2081 2090 3.153919 GGGGTCAAGTTAATGTTGCTCA 58.846 45.455 0.00 0.00 0.00 4.26
2102 2111 3.988976 AGTGCTTCTTCTCTATTGCCA 57.011 42.857 0.00 0.00 0.00 4.92
2103 2112 4.292186 AGTGCTTCTTCTCTATTGCCAA 57.708 40.909 0.00 0.00 0.00 4.52
2120 2129 3.007723 TGCCAAGATGCTTTTTATTGCCA 59.992 39.130 0.00 0.00 0.00 4.92
2147 2156 2.499693 TCAGAGATGGTACGGCAATTGA 59.500 45.455 10.34 0.00 0.00 2.57
2216 2225 8.456471 TCTAGAGTTCGTCGAATTTATCTTGAA 58.544 33.333 11.45 0.00 0.00 2.69
2223 2232 4.876107 GTCGAATTTATCTTGAAGAGGCCA 59.124 41.667 5.01 0.00 0.00 5.36
2326 2335 1.619654 TGTTGCTGCATTACTGGCTT 58.380 45.000 1.84 0.00 0.00 4.35
2536 2559 4.069869 TGCAGAAGGAAGTGCAGC 57.930 55.556 0.00 0.00 44.70 5.25
2562 2585 2.818130 TGCAAAAAGCTGATCCCAAC 57.182 45.000 0.00 0.00 45.94 3.77
2597 2620 8.944029 CATCTCATTGTATAATCTAAGCAAGGG 58.056 37.037 0.00 0.00 0.00 3.95
2640 2663 2.238144 TGAATCAAGGAAGGAGAGGCAG 59.762 50.000 0.00 0.00 0.00 4.85
2663 2686 7.587757 GCAGTCACTAACTCAAAAATACACAAG 59.412 37.037 0.00 0.00 35.45 3.16
2670 2693 5.960113 ACTCAAAAATACACAAGCAACACA 58.040 33.333 0.00 0.00 0.00 3.72
2674 2697 6.475076 TCAAAAATACACAAGCAACACATCAC 59.525 34.615 0.00 0.00 0.00 3.06
2676 2699 5.362556 AATACACAAGCAACACATCACTC 57.637 39.130 0.00 0.00 0.00 3.51
2685 2708 1.896220 ACACATCACTCGTGGCAATT 58.104 45.000 0.00 0.00 38.74 2.32
2723 2746 1.534595 CTTCACTGCTGCTTTCACTCC 59.465 52.381 0.00 0.00 0.00 3.85
2741 2764 2.609747 TCCACCTGGAGGATATAGCAC 58.390 52.381 8.95 0.00 39.78 4.40
2779 2802 4.878397 CAGGACTTCCCATCATGTCTAAAC 59.122 45.833 0.00 0.00 37.41 2.01
2790 2813 6.916387 CCATCATGTCTAAACAGATTGCATTC 59.084 38.462 0.16 0.16 39.20 2.67
2888 2911 4.636206 GTGGGAGGATGATAAGTTCACAAC 59.364 45.833 0.00 0.00 37.11 3.32
2977 3000 1.603802 CTGGTTTGTACACAGTGCTGG 59.396 52.381 0.00 0.00 34.19 4.85
2980 3003 0.106967 TTTGTACACAGTGCTGGCCA 60.107 50.000 4.71 4.71 34.19 5.36
3152 3175 4.225492 TGGCAAATCCAAATCCAATGACAT 59.775 37.500 0.00 0.00 43.21 3.06
3232 3255 7.312154 TGTATCTGTAATGAACATTGTTTGGC 58.688 34.615 3.08 0.00 37.50 4.52
3236 3259 6.714810 TCTGTAATGAACATTGTTTGGCTACT 59.285 34.615 3.08 0.00 37.50 2.57
3237 3260 6.908825 TGTAATGAACATTGTTTGGCTACTC 58.091 36.000 3.08 0.00 31.43 2.59
3247 3270 5.565592 TGTTTGGCTACTCTATTGCAATG 57.434 39.130 22.27 11.73 0.00 2.82
3269 3292 8.310382 CAATGTTACTTGTTAATTCATTGGGGA 58.690 33.333 0.00 0.00 33.97 4.81
3293 3316 8.968242 GGAAAAACATTGTACAGTTCATTCTTC 58.032 33.333 16.97 8.20 0.00 2.87
3303 3326 4.216257 ACAGTTCATTCTTCCATTCCGTTG 59.784 41.667 0.00 0.00 0.00 4.10
3323 3350 5.399301 CGTTGGATGTTCATTTGAAAGACAC 59.601 40.000 0.00 0.00 35.58 3.67
3372 3399 3.106672 CGAGAATGGACGTAGCTACAAC 58.893 50.000 23.21 15.13 0.00 3.32
3483 3510 5.762179 AGGACAACACATAATCCTGAAGA 57.238 39.130 0.00 0.00 40.18 2.87
3484 3511 6.319048 AGGACAACACATAATCCTGAAGAT 57.681 37.500 0.00 0.00 40.18 2.40
3585 3614 3.117888 ACCAGTGAATGTCTGTTTGGACT 60.118 43.478 0.00 0.00 37.16 3.85
3586 3615 3.251729 CCAGTGAATGTCTGTTTGGACTG 59.748 47.826 0.00 0.00 37.16 3.51
3604 3633 6.356556 TGGACTGGATGACCAAAATATAGTG 58.643 40.000 0.00 0.00 46.32 2.74
3616 3645 9.884465 GACCAAAATATAGTGTTCTTATGATGC 57.116 33.333 0.00 0.00 0.00 3.91
3617 3646 9.632638 ACCAAAATATAGTGTTCTTATGATGCT 57.367 29.630 0.00 0.00 0.00 3.79
3622 3651 9.935241 AATATAGTGTTCTTATGATGCTACCAG 57.065 33.333 0.00 0.00 0.00 4.00
3623 3652 5.939764 AGTGTTCTTATGATGCTACCAGA 57.060 39.130 0.00 0.00 0.00 3.86
3625 3654 6.893583 AGTGTTCTTATGATGCTACCAGATT 58.106 36.000 0.00 0.00 0.00 2.40
3626 3655 8.023021 AGTGTTCTTATGATGCTACCAGATTA 57.977 34.615 0.00 0.00 0.00 1.75
3627 3656 8.486210 AGTGTTCTTATGATGCTACCAGATTAA 58.514 33.333 0.00 0.00 0.00 1.40
3630 3659 7.618019 TCTTATGATGCTACCAGATTAACCT 57.382 36.000 0.00 0.00 0.00 3.50
3632 3661 5.894298 ATGATGCTACCAGATTAACCTGA 57.106 39.130 0.00 0.00 36.29 3.86
3634 3663 6.994421 TGATGCTACCAGATTAACCTGATA 57.006 37.500 0.00 0.00 36.29 2.15
3635 3664 7.373617 TGATGCTACCAGATTAACCTGATAA 57.626 36.000 0.00 0.00 36.29 1.75
3636 3665 7.977818 TGATGCTACCAGATTAACCTGATAAT 58.022 34.615 0.00 0.00 36.29 1.28
3638 3667 8.854614 ATGCTACCAGATTAACCTGATAATTC 57.145 34.615 0.00 0.00 36.29 2.17
3639 3668 7.224297 TGCTACCAGATTAACCTGATAATTCC 58.776 38.462 0.00 0.00 36.29 3.01
3640 3669 6.655425 GCTACCAGATTAACCTGATAATTCCC 59.345 42.308 0.00 0.00 36.29 3.97
3641 3670 6.590656 ACCAGATTAACCTGATAATTCCCA 57.409 37.500 0.00 0.00 36.29 4.37
3643 3672 7.062957 ACCAGATTAACCTGATAATTCCCAAG 58.937 38.462 0.00 0.00 36.29 3.61
3644 3673 7.062957 CCAGATTAACCTGATAATTCCCAAGT 58.937 38.462 0.00 0.00 36.29 3.16
3646 3675 7.557719 CAGATTAACCTGATAATTCCCAAGTGT 59.442 37.037 0.00 0.00 36.29 3.55
3647 3676 7.557719 AGATTAACCTGATAATTCCCAAGTGTG 59.442 37.037 0.00 0.00 0.00 3.82
3649 3678 5.456921 ACCTGATAATTCCCAAGTGTGAT 57.543 39.130 0.00 0.00 0.00 3.06
3650 3679 5.195940 ACCTGATAATTCCCAAGTGTGATG 58.804 41.667 0.00 0.00 0.00 3.07
3651 3680 4.581824 CCTGATAATTCCCAAGTGTGATGG 59.418 45.833 0.00 0.00 37.71 3.51
3652 3681 3.953612 TGATAATTCCCAAGTGTGATGGC 59.046 43.478 0.00 0.00 36.58 4.40
3653 3682 1.176527 AATTCCCAAGTGTGATGGCG 58.823 50.000 0.00 0.00 36.58 5.69
3654 3683 0.327924 ATTCCCAAGTGTGATGGCGA 59.672 50.000 0.00 0.00 36.58 5.54
3655 3684 0.327924 TTCCCAAGTGTGATGGCGAT 59.672 50.000 0.00 0.00 36.58 4.58
3656 3685 0.392863 TCCCAAGTGTGATGGCGATG 60.393 55.000 0.00 0.00 36.58 3.84
3657 3686 1.430632 CCAAGTGTGATGGCGATGC 59.569 57.895 0.00 0.00 0.00 3.91
3658 3687 1.307355 CCAAGTGTGATGGCGATGCA 61.307 55.000 0.00 0.00 0.00 3.96
3659 3688 0.736636 CAAGTGTGATGGCGATGCAT 59.263 50.000 0.00 0.00 0.00 3.96
3660 3689 0.736636 AAGTGTGATGGCGATGCATG 59.263 50.000 2.46 0.00 0.00 4.06
3661 3690 0.393402 AGTGTGATGGCGATGCATGT 60.393 50.000 2.46 0.00 0.00 3.21
3662 3691 0.248336 GTGTGATGGCGATGCATGTG 60.248 55.000 2.46 0.00 0.00 3.21
3663 3692 1.357690 GTGATGGCGATGCATGTGG 59.642 57.895 2.46 0.00 0.00 4.17
3664 3693 1.824760 TGATGGCGATGCATGTGGG 60.825 57.895 2.46 0.00 0.00 4.61
3665 3694 1.825191 GATGGCGATGCATGTGGGT 60.825 57.895 2.46 0.00 0.00 4.51
3666 3695 2.067091 GATGGCGATGCATGTGGGTG 62.067 60.000 2.46 0.00 0.00 4.61
3668 3697 3.136123 GCGATGCATGTGGGTGCT 61.136 61.111 2.46 0.00 45.27 4.40
3669 3698 2.795973 CGATGCATGTGGGTGCTG 59.204 61.111 2.46 0.00 45.27 4.41
3670 3699 2.042259 CGATGCATGTGGGTGCTGT 61.042 57.895 2.46 0.00 45.27 4.40
3671 3700 1.588824 CGATGCATGTGGGTGCTGTT 61.589 55.000 2.46 0.00 45.27 3.16
3672 3701 0.604578 GATGCATGTGGGTGCTGTTT 59.395 50.000 2.46 0.00 45.27 2.83
3674 3703 0.958091 TGCATGTGGGTGCTGTTTAC 59.042 50.000 0.00 0.00 45.27 2.01
3675 3704 1.247567 GCATGTGGGTGCTGTTTACT 58.752 50.000 0.00 0.00 41.82 2.24
3679 3708 1.493022 TGTGGGTGCTGTTTACTTCCT 59.507 47.619 0.00 0.00 0.00 3.36
3680 3709 2.092103 TGTGGGTGCTGTTTACTTCCTT 60.092 45.455 0.00 0.00 0.00 3.36
3681 3710 2.293399 GTGGGTGCTGTTTACTTCCTTG 59.707 50.000 0.00 0.00 0.00 3.61
3682 3711 1.886542 GGGTGCTGTTTACTTCCTTGG 59.113 52.381 0.00 0.00 0.00 3.61
3683 3712 2.488347 GGGTGCTGTTTACTTCCTTGGA 60.488 50.000 0.00 0.00 0.00 3.53
3684 3713 2.814336 GGTGCTGTTTACTTCCTTGGAG 59.186 50.000 0.00 0.00 0.00 3.86
3685 3714 2.814336 GTGCTGTTTACTTCCTTGGAGG 59.186 50.000 0.00 0.00 36.46 4.30
3686 3715 1.813178 GCTGTTTACTTCCTTGGAGGC 59.187 52.381 0.00 0.00 34.61 4.70
3687 3716 2.814097 GCTGTTTACTTCCTTGGAGGCA 60.814 50.000 0.00 0.00 34.61 4.75
3688 3717 3.690460 CTGTTTACTTCCTTGGAGGCAT 58.310 45.455 0.00 0.00 34.61 4.40
3690 3719 3.017442 GTTTACTTCCTTGGAGGCATCC 58.983 50.000 11.34 11.34 46.87 3.51
3691 3720 2.270434 TACTTCCTTGGAGGCATCCT 57.730 50.000 19.75 0.00 46.80 3.24
3692 3721 1.376649 ACTTCCTTGGAGGCATCCTT 58.623 50.000 19.75 0.00 46.80 3.36
3693 3722 1.005215 ACTTCCTTGGAGGCATCCTTG 59.995 52.381 19.75 10.82 46.80 3.61
3694 3723 1.005215 CTTCCTTGGAGGCATCCTTGT 59.995 52.381 19.75 0.00 46.80 3.16
3695 3724 0.329261 TCCTTGGAGGCATCCTTGTG 59.671 55.000 19.75 4.78 46.80 3.33
3696 3725 0.038744 CCTTGGAGGCATCCTTGTGT 59.961 55.000 19.75 0.00 46.80 3.72
3697 3726 1.281867 CCTTGGAGGCATCCTTGTGTA 59.718 52.381 19.75 0.00 46.80 2.90
3698 3727 2.359900 CTTGGAGGCATCCTTGTGTAC 58.640 52.381 19.75 0.00 46.80 2.90
3699 3728 1.357137 TGGAGGCATCCTTGTGTACA 58.643 50.000 19.75 0.00 46.80 2.90
3700 3729 1.278985 TGGAGGCATCCTTGTGTACAG 59.721 52.381 19.75 0.00 46.80 2.74
3701 3730 1.279271 GGAGGCATCCTTGTGTACAGT 59.721 52.381 10.91 0.00 42.94 3.55
3702 3731 2.350522 GAGGCATCCTTGTGTACAGTG 58.649 52.381 0.00 0.00 31.76 3.66
3703 3732 1.699634 AGGCATCCTTGTGTACAGTGT 59.300 47.619 0.00 0.00 0.00 3.55
3706 3735 3.306780 GGCATCCTTGTGTACAGTGTACT 60.307 47.826 28.78 8.80 0.00 2.73
3715 3744 2.973899 CAGTGTACTGGCGCTCCT 59.026 61.111 7.64 0.00 40.20 3.69
3716 3745 1.153745 CAGTGTACTGGCGCTCCTC 60.154 63.158 7.64 0.00 40.20 3.71
3718 3747 3.075005 TGTACTGGCGCTCCTCCC 61.075 66.667 7.64 0.00 0.00 4.30
3720 3749 4.075793 TACTGGCGCTCCTCCCCT 62.076 66.667 7.64 0.00 0.00 4.79
3728 3757 1.537643 GCTCCTCCCCTCCCCTATG 60.538 68.421 0.00 0.00 0.00 2.23
3730 3759 1.632269 TCCTCCCCTCCCCTATGGT 60.632 63.158 0.00 0.00 34.77 3.55
3731 3760 1.152008 CCTCCCCTCCCCTATGGTC 60.152 68.421 0.00 0.00 34.77 4.02
3744 3993 1.741706 CTATGGTCCAAGCTGCAAGTG 59.258 52.381 1.02 0.00 35.30 3.16
3745 3994 0.111061 ATGGTCCAAGCTGCAAGTGA 59.889 50.000 1.02 0.00 35.30 3.41
3746 3995 0.106769 TGGTCCAAGCTGCAAGTGAA 60.107 50.000 1.02 0.00 35.30 3.18
3747 3996 1.032014 GGTCCAAGCTGCAAGTGAAA 58.968 50.000 1.02 0.00 35.30 2.69
3748 3997 1.269257 GGTCCAAGCTGCAAGTGAAAC 60.269 52.381 1.02 0.00 35.30 2.78
3750 3999 1.035139 CCAAGCTGCAAGTGAAACCT 58.965 50.000 1.02 0.00 37.80 3.50
3753 4002 1.602311 AGCTGCAAGTGAAACCTCAG 58.398 50.000 1.02 0.00 37.80 3.35
3754 4003 1.141657 AGCTGCAAGTGAAACCTCAGA 59.858 47.619 1.02 0.00 37.80 3.27
3756 4005 2.161211 GCTGCAAGTGAAACCTCAGATC 59.839 50.000 0.00 0.00 37.80 2.75
3757 4006 2.746362 CTGCAAGTGAAACCTCAGATCC 59.254 50.000 0.00 0.00 37.80 3.36
3759 4008 3.245016 TGCAAGTGAAACCTCAGATCCAT 60.245 43.478 0.00 0.00 37.80 3.41
3760 4009 3.760684 GCAAGTGAAACCTCAGATCCATT 59.239 43.478 0.00 0.00 37.80 3.16
3761 4010 4.219288 GCAAGTGAAACCTCAGATCCATTT 59.781 41.667 0.00 0.00 37.80 2.32
3762 4011 5.415701 GCAAGTGAAACCTCAGATCCATTTA 59.584 40.000 0.00 0.00 37.80 1.40
3763 4012 6.071952 GCAAGTGAAACCTCAGATCCATTTAA 60.072 38.462 0.00 0.00 37.80 1.52
3764 4013 7.363268 GCAAGTGAAACCTCAGATCCATTTAAT 60.363 37.037 0.00 0.00 37.80 1.40
3765 4014 8.526147 CAAGTGAAACCTCAGATCCATTTAATT 58.474 33.333 0.00 0.00 37.80 1.40
3766 4015 8.286191 AGTGAAACCTCAGATCCATTTAATTC 57.714 34.615 0.00 0.00 37.80 2.17
3767 4016 7.890127 AGTGAAACCTCAGATCCATTTAATTCA 59.110 33.333 0.00 0.00 37.80 2.57
3768 4017 8.689972 GTGAAACCTCAGATCCATTTAATTCAT 58.310 33.333 0.00 0.00 30.14 2.57
3769 4018 8.689061 TGAAACCTCAGATCCATTTAATTCATG 58.311 33.333 0.00 0.00 0.00 3.07
3770 4019 8.599624 AAACCTCAGATCCATTTAATTCATGT 57.400 30.769 0.00 0.00 0.00 3.21
3772 4021 9.699410 AACCTCAGATCCATTTAATTCATGTTA 57.301 29.630 0.00 0.00 0.00 2.41
3773 4022 9.699410 ACCTCAGATCCATTTAATTCATGTTAA 57.301 29.630 0.00 0.00 0.00 2.01
3776 4025 9.699410 TCAGATCCATTTAATTCATGTTAAGGT 57.301 29.630 0.00 0.00 0.00 3.50
3807 4056 7.784633 ACCAAATTTAATATGAAAATGCGGG 57.215 32.000 0.00 9.52 0.00 6.13
3809 4058 6.204495 CCAAATTTAATATGAAAATGCGGGGG 59.796 38.462 0.00 0.00 0.00 5.40
3810 4059 6.739331 AATTTAATATGAAAATGCGGGGGA 57.261 33.333 0.00 0.00 0.00 4.81
3811 4060 6.739331 ATTTAATATGAAAATGCGGGGGAA 57.261 33.333 0.00 0.00 0.00 3.97
3812 4061 6.739331 TTTAATATGAAAATGCGGGGGAAT 57.261 33.333 0.00 0.00 0.00 3.01
3814 4063 7.841282 TTAATATGAAAATGCGGGGGAATAA 57.159 32.000 0.00 0.00 0.00 1.40
3815 4064 6.933514 AATATGAAAATGCGGGGGAATAAT 57.066 33.333 0.00 0.00 0.00 1.28
3817 4066 5.628797 ATGAAAATGCGGGGGAATAATTT 57.371 34.783 0.00 0.00 0.00 1.82
3818 4067 5.428184 TGAAAATGCGGGGGAATAATTTT 57.572 34.783 0.00 0.00 34.14 1.82
3819 4068 6.546428 TGAAAATGCGGGGGAATAATTTTA 57.454 33.333 0.00 0.00 32.20 1.52
3820 4069 6.578023 TGAAAATGCGGGGGAATAATTTTAG 58.422 36.000 0.00 0.00 32.20 1.85
3821 4070 6.381420 TGAAAATGCGGGGGAATAATTTTAGA 59.619 34.615 0.00 0.00 32.20 2.10
3822 4071 6.994421 AAATGCGGGGGAATAATTTTAGAT 57.006 33.333 0.00 0.00 0.00 1.98
3823 4072 6.590234 AATGCGGGGGAATAATTTTAGATC 57.410 37.500 0.00 0.00 0.00 2.75
3824 4073 5.319043 TGCGGGGGAATAATTTTAGATCT 57.681 39.130 0.00 0.00 0.00 2.75
3825 4074 6.442541 TGCGGGGGAATAATTTTAGATCTA 57.557 37.500 0.00 0.00 0.00 1.98
3826 4075 7.027874 TGCGGGGGAATAATTTTAGATCTAT 57.972 36.000 2.58 0.00 0.00 1.98
3828 4077 6.318900 GCGGGGGAATAATTTTAGATCTATGG 59.681 42.308 2.58 0.00 0.00 2.74
3829 4078 6.828785 CGGGGGAATAATTTTAGATCTATGGG 59.171 42.308 2.58 0.00 0.00 4.00
3830 4079 7.530584 CGGGGGAATAATTTTAGATCTATGGGT 60.531 40.741 2.58 0.00 0.00 4.51
3831 4080 7.615757 GGGGGAATAATTTTAGATCTATGGGTG 59.384 40.741 2.58 0.00 0.00 4.61
3832 4081 8.170730 GGGGAATAATTTTAGATCTATGGGTGT 58.829 37.037 2.58 0.00 0.00 4.16
3834 4083 9.574516 GGAATAATTTTAGATCTATGGGTGTGT 57.425 33.333 2.58 0.00 0.00 3.72
3837 4086 9.920946 ATAATTTTAGATCTATGGGTGTGTTGT 57.079 29.630 2.58 0.00 0.00 3.32
3839 4088 2.991250 AGATCTATGGGTGTGTTGTGC 58.009 47.619 0.00 0.00 0.00 4.57
3840 4089 2.305635 AGATCTATGGGTGTGTTGTGCA 59.694 45.455 0.00 0.00 0.00 4.57
3849 4098 3.509266 GTGTTGTGCACTGAACGTC 57.491 52.632 19.41 8.50 44.41 4.34
3850 4099 0.724549 GTGTTGTGCACTGAACGTCA 59.275 50.000 19.41 4.03 44.41 4.35
3852 4101 1.129624 TGTTGTGCACTGAACGTCAAC 59.870 47.619 19.41 11.60 36.66 3.18
3853 4102 1.129624 GTTGTGCACTGAACGTCAACA 59.870 47.619 19.41 0.00 36.31 3.33
3854 4103 1.662517 TGTGCACTGAACGTCAACAT 58.337 45.000 19.41 0.00 0.00 2.71
3855 4104 1.597195 TGTGCACTGAACGTCAACATC 59.403 47.619 19.41 0.00 0.00 3.06
3856 4105 1.597195 GTGCACTGAACGTCAACATCA 59.403 47.619 10.32 0.00 0.00 3.07
3857 4106 1.866601 TGCACTGAACGTCAACATCAG 59.133 47.619 11.68 11.68 44.77 2.90
3863 4112 4.730600 TGAACGTCAACATCAGTTCATG 57.269 40.909 5.86 0.00 45.21 3.07
3864 4113 4.126437 TGAACGTCAACATCAGTTCATGT 58.874 39.130 5.86 0.00 45.21 3.21
3865 4114 4.024977 TGAACGTCAACATCAGTTCATGTG 60.025 41.667 5.86 0.00 45.21 3.21
3866 4115 3.466836 ACGTCAACATCAGTTCATGTGT 58.533 40.909 0.00 0.00 37.07 3.72
3867 4116 4.627058 ACGTCAACATCAGTTCATGTGTA 58.373 39.130 0.00 0.00 37.07 2.90
3868 4117 5.053811 ACGTCAACATCAGTTCATGTGTAA 58.946 37.500 0.00 0.00 37.07 2.41
3869 4118 5.050363 ACGTCAACATCAGTTCATGTGTAAC 60.050 40.000 0.00 0.00 37.07 2.50
3870 4119 5.050431 CGTCAACATCAGTTCATGTGTAACA 60.050 40.000 0.00 0.00 44.55 2.41
3871 4120 6.510960 CGTCAACATCAGTTCATGTGTAACAA 60.511 38.462 0.00 0.00 43.87 2.83
3872 4121 6.632834 GTCAACATCAGTTCATGTGTAACAAC 59.367 38.462 0.00 0.00 43.87 3.32
3873 4122 6.317391 TCAACATCAGTTCATGTGTAACAACA 59.683 34.615 0.00 0.00 43.87 3.33
3874 4123 6.971756 CAACATCAGTTCATGTGTAACAACAA 59.028 34.615 0.00 0.00 43.87 2.83
3875 4124 7.487509 CAACATCAGTTCATGTGTAACAACAAA 59.512 33.333 0.00 0.00 43.87 2.83
3876 4125 8.196771 AACATCAGTTCATGTGTAACAACAAAT 58.803 29.630 0.00 0.00 42.62 2.32
3887 4136 6.977316 GTGTAACAACAAATGTGTTTGAGTG 58.023 36.000 0.00 7.53 46.01 3.51
3888 4137 6.804295 GTGTAACAACAAATGTGTTTGAGTGA 59.196 34.615 0.00 0.00 46.01 3.41
3889 4138 7.008266 GTGTAACAACAAATGTGTTTGAGTGAG 59.992 37.037 0.00 0.00 46.01 3.51
3890 4139 4.423732 ACAACAAATGTGTTTGAGTGAGC 58.576 39.130 0.00 0.00 46.01 4.26
3891 4140 3.715628 ACAAATGTGTTTGAGTGAGCC 57.284 42.857 7.79 0.00 46.03 4.70
3892 4141 3.023119 ACAAATGTGTTTGAGTGAGCCA 58.977 40.909 7.79 0.00 46.03 4.75
3893 4142 3.638160 ACAAATGTGTTTGAGTGAGCCAT 59.362 39.130 7.79 0.00 46.03 4.40
3894 4143 4.099881 ACAAATGTGTTTGAGTGAGCCATT 59.900 37.500 7.79 0.00 46.03 3.16
3895 4144 4.942761 AATGTGTTTGAGTGAGCCATTT 57.057 36.364 0.00 0.00 0.00 2.32
3896 4145 3.713858 TGTGTTTGAGTGAGCCATTTG 57.286 42.857 0.00 0.00 0.00 2.32
3897 4146 3.286353 TGTGTTTGAGTGAGCCATTTGA 58.714 40.909 0.00 0.00 0.00 2.69
3898 4147 3.316029 TGTGTTTGAGTGAGCCATTTGAG 59.684 43.478 0.00 0.00 0.00 3.02
3899 4148 3.316308 GTGTTTGAGTGAGCCATTTGAGT 59.684 43.478 0.00 0.00 0.00 3.41
3900 4149 3.565482 TGTTTGAGTGAGCCATTTGAGTC 59.435 43.478 0.00 0.00 0.00 3.36
3901 4150 3.490439 TTGAGTGAGCCATTTGAGTCA 57.510 42.857 0.00 0.00 0.00 3.41
3902 4151 2.771089 TGAGTGAGCCATTTGAGTCAC 58.229 47.619 0.00 0.00 39.74 3.67
3904 4153 3.051081 AGTGAGCCATTTGAGTCACTC 57.949 47.619 0.00 0.00 45.11 3.51
3905 4154 2.369860 AGTGAGCCATTTGAGTCACTCA 59.630 45.455 2.36 2.36 45.11 3.41
3906 4155 3.141398 GTGAGCCATTTGAGTCACTCAA 58.859 45.455 16.67 16.67 46.93 3.02
3917 4166 5.353394 TGAGTCACTCAAACAACTTAGGT 57.647 39.130 4.55 0.00 37.57 3.08
3918 4167 5.741011 TGAGTCACTCAAACAACTTAGGTT 58.259 37.500 4.55 0.00 37.57 3.50
3919 4168 6.177610 TGAGTCACTCAAACAACTTAGGTTT 58.822 36.000 4.55 0.00 37.57 3.27
3920 4169 6.657541 TGAGTCACTCAAACAACTTAGGTTTT 59.342 34.615 4.55 0.00 37.57 2.43
3921 4170 7.825270 TGAGTCACTCAAACAACTTAGGTTTTA 59.175 33.333 4.55 0.00 37.57 1.52
3922 4171 8.747538 AGTCACTCAAACAACTTAGGTTTTAT 57.252 30.769 0.00 0.00 36.38 1.40
3923 4172 9.841295 AGTCACTCAAACAACTTAGGTTTTATA 57.159 29.630 0.00 0.00 36.38 0.98
3946 4195 6.877611 ATTAATCGAAAACTCCAGTGTTGT 57.122 33.333 0.00 0.00 0.00 3.32
3947 4196 7.972832 ATTAATCGAAAACTCCAGTGTTGTA 57.027 32.000 0.00 0.00 0.00 2.41
3948 4197 5.924475 AATCGAAAACTCCAGTGTTGTAG 57.076 39.130 0.00 0.00 0.00 2.74
3955 4204 7.062371 CGAAAACTCCAGTGTTGTAGATCTAAG 59.938 40.741 3.40 0.00 0.00 2.18
3956 4205 6.919775 AACTCCAGTGTTGTAGATCTAAGT 57.080 37.500 3.40 0.00 0.00 2.24
3960 4209 5.046591 TCCAGTGTTGTAGATCTAAGTTGGG 60.047 44.000 3.40 1.39 0.00 4.12
3961 4210 5.280011 CCAGTGTTGTAGATCTAAGTTGGGT 60.280 44.000 3.40 0.00 0.00 4.51
3966 4215 6.070995 TGTTGTAGATCTAAGTTGGGTGTAGG 60.071 42.308 3.40 0.00 0.00 3.18
3969 4218 4.695606 AGATCTAAGTTGGGTGTAGGGAA 58.304 43.478 0.00 0.00 0.00 3.97
3970 4219 4.470304 AGATCTAAGTTGGGTGTAGGGAAC 59.530 45.833 0.00 0.00 0.00 3.62
3972 4221 5.014534 TCTAAGTTGGGTGTAGGGAACTA 57.985 43.478 0.00 0.00 43.67 2.24
3973 4222 5.021458 TCTAAGTTGGGTGTAGGGAACTAG 58.979 45.833 0.00 0.00 45.49 2.57
3977 4226 1.437945 TGGGTGTAGGGAACTAGGGAA 59.562 52.381 0.00 0.00 45.49 3.97
3978 4227 2.157973 TGGGTGTAGGGAACTAGGGAAA 60.158 50.000 0.00 0.00 45.49 3.13
3984 4233 0.675837 GGGAACTAGGGAAACGTGGC 60.676 60.000 0.00 0.00 0.00 5.01
3985 4234 0.035739 GGAACTAGGGAAACGTGGCA 59.964 55.000 0.00 0.00 0.00 4.92
3986 4235 1.339727 GGAACTAGGGAAACGTGGCAT 60.340 52.381 0.00 0.00 0.00 4.40
3987 4236 2.007608 GAACTAGGGAAACGTGGCATC 58.992 52.381 0.00 0.00 0.00 3.91
3988 4237 1.276622 ACTAGGGAAACGTGGCATCT 58.723 50.000 0.00 0.00 0.00 2.90
3989 4238 1.628846 ACTAGGGAAACGTGGCATCTT 59.371 47.619 0.00 0.00 0.00 2.40
3990 4239 2.039879 ACTAGGGAAACGTGGCATCTTT 59.960 45.455 0.00 0.00 0.00 2.52
3991 4240 1.995376 AGGGAAACGTGGCATCTTTT 58.005 45.000 0.00 0.00 0.00 2.27
3992 4241 2.316108 AGGGAAACGTGGCATCTTTTT 58.684 42.857 0.00 0.00 0.00 1.94
4014 4263 3.421919 TCAGAATGATTGTGGTGCTGA 57.578 42.857 2.31 0.00 42.56 4.26
4015 4264 3.753815 TCAGAATGATTGTGGTGCTGAA 58.246 40.909 2.31 0.00 42.56 3.02
4016 4265 3.503363 TCAGAATGATTGTGGTGCTGAAC 59.497 43.478 2.31 0.00 42.56 3.18
4017 4266 3.504906 CAGAATGATTGTGGTGCTGAACT 59.495 43.478 0.00 0.00 39.69 3.01
4018 4267 4.022589 CAGAATGATTGTGGTGCTGAACTT 60.023 41.667 0.00 0.00 39.69 2.66
4019 4268 4.586001 AGAATGATTGTGGTGCTGAACTTT 59.414 37.500 0.00 0.00 0.00 2.66
4020 4269 5.769662 AGAATGATTGTGGTGCTGAACTTTA 59.230 36.000 0.00 0.00 0.00 1.85
4021 4270 5.633830 ATGATTGTGGTGCTGAACTTTAG 57.366 39.130 0.00 0.00 0.00 1.85
4022 4271 3.820467 TGATTGTGGTGCTGAACTTTAGG 59.180 43.478 0.00 0.00 0.00 2.69
4023 4272 3.569194 TTGTGGTGCTGAACTTTAGGA 57.431 42.857 0.00 0.00 0.00 2.94
4025 4274 2.703536 TGTGGTGCTGAACTTTAGGAGA 59.296 45.455 0.00 0.00 0.00 3.71
4026 4275 3.327757 TGTGGTGCTGAACTTTAGGAGAT 59.672 43.478 0.00 0.00 0.00 2.75
4027 4276 4.530553 TGTGGTGCTGAACTTTAGGAGATA 59.469 41.667 0.00 0.00 0.00 1.98
4028 4277 4.870991 GTGGTGCTGAACTTTAGGAGATAC 59.129 45.833 0.00 0.00 0.00 2.24
4029 4278 4.777896 TGGTGCTGAACTTTAGGAGATACT 59.222 41.667 0.00 0.00 0.00 2.12
4030 4279 5.112686 GGTGCTGAACTTTAGGAGATACTG 58.887 45.833 0.00 0.00 0.00 2.74
4031 4280 5.105310 GGTGCTGAACTTTAGGAGATACTGA 60.105 44.000 0.00 0.00 0.00 3.41
4033 4282 6.874134 GTGCTGAACTTTAGGAGATACTGAAA 59.126 38.462 0.00 0.00 0.00 2.69
4034 4283 7.550906 GTGCTGAACTTTAGGAGATACTGAAAT 59.449 37.037 0.00 0.00 0.00 2.17
4035 4284 8.758829 TGCTGAACTTTAGGAGATACTGAAATA 58.241 33.333 0.00 0.00 0.00 1.40
4057 4306 8.976986 AATATTTGAGAGAACTTGATTTGCAC 57.023 30.769 0.00 0.00 0.00 4.57
4058 4307 5.833406 TTTGAGAGAACTTGATTTGCACA 57.167 34.783 0.00 0.00 0.00 4.57
4059 4308 5.428496 TTGAGAGAACTTGATTTGCACAG 57.572 39.130 0.00 0.00 0.00 3.66
4060 4309 3.251729 TGAGAGAACTTGATTTGCACAGC 59.748 43.478 0.00 0.00 0.00 4.40
4061 4310 3.216800 AGAGAACTTGATTTGCACAGCA 58.783 40.909 0.00 0.00 36.47 4.41
4063 4312 5.005740 AGAGAACTTGATTTGCACAGCATA 58.994 37.500 0.00 0.00 38.76 3.14
4064 4313 5.051891 AGAACTTGATTTGCACAGCATAC 57.948 39.130 0.00 0.00 38.76 2.39
4065 4314 4.520111 AGAACTTGATTTGCACAGCATACA 59.480 37.500 0.00 0.00 38.76 2.29
4066 4315 4.852134 ACTTGATTTGCACAGCATACAA 57.148 36.364 0.00 0.12 38.76 2.41
4067 4316 4.549458 ACTTGATTTGCACAGCATACAAC 58.451 39.130 0.00 0.00 38.76 3.32
4068 4317 4.037803 ACTTGATTTGCACAGCATACAACA 59.962 37.500 0.00 0.00 38.76 3.33
4071 4320 4.022155 TGATTTGCACAGCATACAACATGT 60.022 37.500 0.00 0.00 38.76 3.21
4112 7530 7.936301 GCTGATAAGAATTAGTTCTGGATTCCT 59.064 37.037 3.95 0.00 43.80 3.36
4113 7531 9.844257 CTGATAAGAATTAGTTCTGGATTCCTT 57.156 33.333 3.95 0.00 43.80 3.36
4114 7532 9.618890 TGATAAGAATTAGTTCTGGATTCCTTG 57.381 33.333 3.95 0.00 43.80 3.61
4115 7533 9.838339 GATAAGAATTAGTTCTGGATTCCTTGA 57.162 33.333 3.95 0.00 43.80 3.02
4116 7534 7.929941 AAGAATTAGTTCTGGATTCCTTGAC 57.070 36.000 3.95 0.04 43.80 3.18
4124 7542 2.486982 CTGGATTCCTTGACTTGCACAG 59.513 50.000 3.95 0.00 0.00 3.66
4149 7567 8.475639 AGTTACATGTAAGATCAAATACGACCT 58.524 33.333 18.56 4.42 0.00 3.85
4158 7576 0.107654 AAATACGACCTGGCTGCCTC 60.108 55.000 21.03 8.31 0.00 4.70
4159 7577 1.264749 AATACGACCTGGCTGCCTCA 61.265 55.000 21.03 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 1.398390 GGCTGAAGAACCATACAAGCG 59.602 52.381 0.00 0.00 0.00 4.68
48 49 1.985159 ACCAGGCTGAAGAACCATACA 59.015 47.619 17.94 0.00 0.00 2.29
82 83 8.846943 ATCAAAAACCTAAACAAATTGATCCC 57.153 30.769 0.00 0.00 32.26 3.85
104 105 6.069673 TCCAGTTTATAAGGGAAGCTGAATCA 60.070 38.462 0.00 0.00 37.32 2.57
108 109 5.428457 TGATCCAGTTTATAAGGGAAGCTGA 59.572 40.000 6.67 0.00 37.32 4.26
110 111 5.975988 TGATCCAGTTTATAAGGGAAGCT 57.024 39.130 6.67 0.00 32.25 3.74
112 113 8.435982 AGAGAATGATCCAGTTTATAAGGGAAG 58.564 37.037 6.67 0.00 32.25 3.46
127 128 3.501445 GCCATGCACTAAGAGAATGATCC 59.499 47.826 0.00 0.00 0.00 3.36
133 134 2.040278 AGTTGGCCATGCACTAAGAGAA 59.960 45.455 6.09 0.00 0.00 2.87
144 145 6.349300 AGTATACTACTCAAAGTTGGCCATG 58.651 40.000 6.09 0.75 32.47 3.66
162 163 3.467803 GAGTTGCCCCACATGAGTATAC 58.532 50.000 0.00 0.00 0.00 1.47
178 179 1.421646 GGGTGATATGGGAGGGAGTTG 59.578 57.143 0.00 0.00 0.00 3.16
215 216 1.495878 AGACGCTTGCATCGATGATC 58.504 50.000 29.20 12.58 0.00 2.92
221 222 3.867055 ATATCAAAGACGCTTGCATCG 57.133 42.857 7.25 7.25 0.00 3.84
222 223 4.206843 CGAATATCAAAGACGCTTGCATC 58.793 43.478 0.00 0.00 0.00 3.91
318 319 1.152881 CATGCCTACCTTCCTGCCC 60.153 63.158 0.00 0.00 0.00 5.36
329 330 1.097232 GCACACAAGATGCATGCCTA 58.903 50.000 16.68 0.00 42.88 3.93
357 358 6.099701 TGTGATGGAGCTAGCCTTTAAGATTA 59.900 38.462 12.13 0.00 0.00 1.75
447 448 8.992073 TGAAACGGAGAACCTTTATAAAGTAAC 58.008 33.333 20.99 12.43 34.20 2.50
448 449 9.558396 TTGAAACGGAGAACCTTTATAAAGTAA 57.442 29.630 20.99 0.00 34.20 2.24
465 466 5.472137 CCTTTGATAAAGTCCTTGAAACGGA 59.528 40.000 0.00 0.00 36.77 4.69
522 523 6.656270 CCATTAGCCATGTGTGTGATATATGT 59.344 38.462 0.00 0.00 0.00 2.29
525 526 6.432403 TCCATTAGCCATGTGTGTGATATA 57.568 37.500 0.00 0.00 0.00 0.86
547 548 6.595772 ACTCACTCGCTCAATTTGATTATC 57.404 37.500 0.00 0.00 0.00 1.75
576 577 2.178912 TGGACGCTGGAGTTAAAAGG 57.821 50.000 0.00 0.00 0.00 3.11
583 584 3.074412 CAACTTTTATGGACGCTGGAGT 58.926 45.455 0.00 0.00 0.00 3.85
638 639 0.386858 TGTCACACTACGAAGAGCGC 60.387 55.000 0.00 0.00 46.04 5.92
657 658 1.821753 AGCAGAGATCAAGTGCGTAGT 59.178 47.619 7.94 0.00 42.26 2.73
658 659 2.575694 AGCAGAGATCAAGTGCGTAG 57.424 50.000 7.94 0.00 42.26 3.51
659 660 3.017442 AGTAGCAGAGATCAAGTGCGTA 58.983 45.455 7.94 0.94 42.26 4.42
660 661 1.821753 AGTAGCAGAGATCAAGTGCGT 59.178 47.619 7.94 1.66 42.26 5.24
663 664 3.925299 CACACAGTAGCAGAGATCAAGTG 59.075 47.826 0.00 0.00 0.00 3.16
696 697 5.401531 TCTAGGTGAAATAGTTCGCACTT 57.598 39.130 17.27 5.87 44.59 3.16
700 701 6.128526 GGCATAATCTAGGTGAAATAGTTCGC 60.129 42.308 7.92 7.92 42.49 4.70
701 702 6.369065 GGGCATAATCTAGGTGAAATAGTTCG 59.631 42.308 0.00 0.00 36.46 3.95
724 725 5.650543 GAGTTAATGGTAGCAAAACATGGG 58.349 41.667 19.53 0.00 0.00 4.00
733 734 4.069304 AGCAAAACGAGTTAATGGTAGCA 58.931 39.130 0.00 0.00 0.00 3.49
734 735 4.680171 AGCAAAACGAGTTAATGGTAGC 57.320 40.909 0.00 0.00 0.00 3.58
735 736 5.640357 TGGTAGCAAAACGAGTTAATGGTAG 59.360 40.000 11.33 0.00 0.00 3.18
736 737 5.549347 TGGTAGCAAAACGAGTTAATGGTA 58.451 37.500 0.00 8.52 0.00 3.25
737 738 4.391155 TGGTAGCAAAACGAGTTAATGGT 58.609 39.130 0.00 9.95 0.00 3.55
738 739 5.560966 ATGGTAGCAAAACGAGTTAATGG 57.439 39.130 0.00 0.00 0.00 3.16
739 740 6.305399 CACAATGGTAGCAAAACGAGTTAATG 59.695 38.462 0.00 0.00 0.00 1.90
740 741 6.205853 TCACAATGGTAGCAAAACGAGTTAAT 59.794 34.615 0.00 0.00 0.00 1.40
741 742 5.527951 TCACAATGGTAGCAAAACGAGTTAA 59.472 36.000 0.00 0.00 0.00 2.01
742 743 5.057819 TCACAATGGTAGCAAAACGAGTTA 58.942 37.500 0.00 0.00 0.00 2.24
743 744 3.880490 TCACAATGGTAGCAAAACGAGTT 59.120 39.130 0.00 0.00 0.00 3.01
744 745 3.472652 TCACAATGGTAGCAAAACGAGT 58.527 40.909 0.00 0.00 0.00 4.18
745 746 3.498397 ACTCACAATGGTAGCAAAACGAG 59.502 43.478 0.00 6.02 0.00 4.18
746 747 3.472652 ACTCACAATGGTAGCAAAACGA 58.527 40.909 0.00 0.00 0.00 3.85
747 748 3.896648 ACTCACAATGGTAGCAAAACG 57.103 42.857 0.00 0.00 0.00 3.60
748 749 5.587289 TCAAACTCACAATGGTAGCAAAAC 58.413 37.500 0.00 0.00 0.00 2.43
749 750 5.843673 TCAAACTCACAATGGTAGCAAAA 57.156 34.783 0.00 0.00 0.00 2.44
750 751 5.769662 AGATCAAACTCACAATGGTAGCAAA 59.230 36.000 0.00 0.00 0.00 3.68
751 752 5.316167 AGATCAAACTCACAATGGTAGCAA 58.684 37.500 0.00 0.00 0.00 3.91
752 753 4.910195 AGATCAAACTCACAATGGTAGCA 58.090 39.130 0.00 0.00 0.00 3.49
753 754 6.763135 TGATAGATCAAACTCACAATGGTAGC 59.237 38.462 0.00 0.00 33.08 3.58
754 755 7.440556 CCTGATAGATCAAACTCACAATGGTAG 59.559 40.741 0.00 0.00 36.18 3.18
755 756 7.125659 TCCTGATAGATCAAACTCACAATGGTA 59.874 37.037 0.00 0.00 36.18 3.25
756 757 6.070021 TCCTGATAGATCAAACTCACAATGGT 60.070 38.462 0.00 0.00 36.18 3.55
757 758 6.351711 TCCTGATAGATCAAACTCACAATGG 58.648 40.000 0.00 0.00 36.18 3.16
758 759 8.447924 AATCCTGATAGATCAAACTCACAATG 57.552 34.615 0.00 0.00 36.18 2.82
759 760 8.492782 AGAATCCTGATAGATCAAACTCACAAT 58.507 33.333 0.00 0.00 36.18 2.71
760 761 7.855375 AGAATCCTGATAGATCAAACTCACAA 58.145 34.615 0.00 0.00 36.18 3.33
761 762 7.429374 AGAATCCTGATAGATCAAACTCACA 57.571 36.000 0.00 0.00 36.18 3.58
762 763 8.203485 AGAAGAATCCTGATAGATCAAACTCAC 58.797 37.037 0.00 0.00 36.18 3.51
789 790 5.005971 GCATTGCAACATTATTAGGCACAAG 59.994 40.000 0.00 0.00 33.66 3.16
803 804 1.065436 CACCACACGCATTGCAACA 59.935 52.632 0.00 0.00 0.00 3.33
804 805 1.661197 CCACCACACGCATTGCAAC 60.661 57.895 0.00 0.00 0.00 4.17
814 815 0.243095 GACTAGACCGACCACCACAC 59.757 60.000 0.00 0.00 0.00 3.82
825 826 9.575783 CAAACAAGATCTAAACTAGACTAGACC 57.424 37.037 16.55 0.00 37.69 3.85
844 845 4.811555 TGTGATCTTCGAACCAAACAAG 57.188 40.909 0.00 0.00 0.00 3.16
845 846 4.819088 TGATGTGATCTTCGAACCAAACAA 59.181 37.500 0.00 0.00 0.00 2.83
882 883 6.498304 AGAAATAATGGCAATCGTAAGCAAG 58.502 36.000 0.00 0.00 37.18 4.01
947 948 5.769662 TGAAAGAAAGGTGATACTTGCATGT 59.230 36.000 10.40 10.40 0.00 3.21
1054 1063 1.576356 GCTGCTTCTAGGATCCGTTG 58.424 55.000 5.98 0.52 0.00 4.10
1079 1088 2.972625 TCATTGACGAGGAATCACCAC 58.027 47.619 0.00 0.00 42.04 4.16
1098 1107 4.082517 GGATTCTTCTTGGCCAACTCTTTC 60.083 45.833 16.05 7.49 0.00 2.62
1155 1164 1.555075 GTGGAGATGTGGAGGCAGTTA 59.445 52.381 0.00 0.00 0.00 2.24
1234 1243 0.671472 TGCTCGCAGTTGACATCTGG 60.671 55.000 13.99 5.88 33.98 3.86
1254 1263 1.153745 GATGACAAGCGGCGTCTCT 60.154 57.895 9.37 0.00 34.37 3.10
1294 1303 5.474876 ACTTGAGTAAATCTGAAGCCAAAGG 59.525 40.000 0.00 0.00 40.23 3.11
1306 1315 3.128465 GCAGCAGCACTTGAGTAAATC 57.872 47.619 0.00 0.00 41.58 2.17
1349 1358 3.788227 ACCTGTCCTGTTGCAAGATTA 57.212 42.857 0.00 0.00 0.00 1.75
1362 1371 1.940613 GCGTTGAATCCATACCTGTCC 59.059 52.381 0.00 0.00 0.00 4.02
1446 1455 3.626924 ACGGCTTTCGACAGGGCT 61.627 61.111 0.00 0.00 42.43 5.19
1455 1464 1.873698 TGTACTTGGTCACGGCTTTC 58.126 50.000 0.00 0.00 0.00 2.62
1469 1478 1.555075 ACATGGGCGACTCATTGTACT 59.445 47.619 0.00 0.00 0.00 2.73
1513 1522 4.744795 ATAGCTTCTCGGAAACATCTGT 57.255 40.909 0.00 0.00 0.00 3.41
1527 1536 2.026641 TCAGCAATGGCCAATAGCTTC 58.973 47.619 22.66 4.24 42.56 3.86
1536 1545 2.372264 TGAGAAGAATCAGCAATGGCC 58.628 47.619 0.00 0.00 42.56 5.36
1544 1553 5.251764 ACTTTCCCACATGAGAAGAATCAG 58.748 41.667 0.00 0.00 31.44 2.90
1609 1618 4.578871 TGTAATCCACAGGTCTCACATTG 58.421 43.478 0.00 0.00 31.89 2.82
1612 1621 3.646162 ACTTGTAATCCACAGGTCTCACA 59.354 43.478 0.00 0.00 43.51 3.58
1648 1657 6.425114 AGCTAGTTTGCTGCACATACATATAC 59.575 38.462 0.00 0.00 42.33 1.47
1793 1802 5.068234 TGATAGGACAAGTCTTTGGTACG 57.932 43.478 0.00 0.00 38.66 3.67
1813 1822 4.507710 GGTTAAGAGCACAGTGATGATGA 58.492 43.478 4.15 0.00 0.00 2.92
1821 1830 1.623811 ACGATGGGTTAAGAGCACAGT 59.376 47.619 0.00 0.00 0.00 3.55
1842 1851 3.293311 AACAAGTCAAGACATGCATGC 57.707 42.857 26.53 18.25 33.71 4.06
1861 1870 2.031258 TCGCCCGCAATATCTGAAAA 57.969 45.000 0.00 0.00 0.00 2.29
1890 1899 1.376037 GGCCAGGAGAGGACGTTTG 60.376 63.158 0.00 0.00 0.00 2.93
1897 1906 1.970352 GCTTCTCTGGCCAGGAGAGG 61.970 65.000 32.23 28.46 40.35 3.69
1901 1910 1.229304 TCAGCTTCTCTGGCCAGGA 60.229 57.895 32.23 23.91 43.06 3.86
1942 1951 6.875076 ACTTGTCGTAAGTTATAGCCATTCT 58.125 36.000 2.70 0.00 39.48 2.40
1951 1960 5.152097 CACGTCAGACTTGTCGTAAGTTAT 58.848 41.667 8.72 0.71 44.94 1.89
1954 1963 2.857489 GCACGTCAGACTTGTCGTAAGT 60.857 50.000 8.72 7.38 44.94 2.24
1957 1966 0.949397 AGCACGTCAGACTTGTCGTA 59.051 50.000 8.72 0.00 44.94 3.43
1959 1968 0.595053 ACAGCACGTCAGACTTGTCG 60.595 55.000 8.72 3.25 40.80 4.35
2000 2009 7.552687 TCTTGTCGGTTTCATATGCTAAAGAAT 59.447 33.333 0.00 0.00 0.00 2.40
2027 2036 4.624913 TGAACAGAGGAGAGGATAACCAT 58.375 43.478 0.00 0.00 38.94 3.55
2081 2090 4.292186 TGGCAATAGAGAAGAAGCACTT 57.708 40.909 0.00 0.00 42.03 3.16
2102 2111 5.716703 AGTACCTGGCAATAAAAAGCATCTT 59.283 36.000 0.00 0.00 0.00 2.40
2103 2112 5.264395 AGTACCTGGCAATAAAAAGCATCT 58.736 37.500 0.00 0.00 0.00 2.90
2120 2129 2.933573 CCGTACCATCTCTGAGTACCT 58.066 52.381 4.32 0.00 34.22 3.08
2216 2225 0.472471 TTTCCGAAGTTGTGGCCTCT 59.528 50.000 3.32 0.00 0.00 3.69
2223 2232 6.668323 CATGTTAATGAGTTTCCGAAGTTGT 58.332 36.000 0.00 0.00 35.67 3.32
2326 2335 9.955208 AATTGTTGTGTCTATTATATCGTCGTA 57.045 29.630 0.00 0.00 0.00 3.43
2495 2504 8.782144 GCATGGATTCAATTAAAAACAAGGAAA 58.218 29.630 0.00 0.00 0.00 3.13
2546 2569 3.420893 TCATCGTTGGGATCAGCTTTTT 58.579 40.909 0.00 0.00 31.28 1.94
2597 2620 1.172812 AGTTTCCCGTTGCTTGGCTC 61.173 55.000 0.00 0.00 0.00 4.70
2640 2663 7.414436 TGCTTGTGTATTTTTGAGTTAGTGAC 58.586 34.615 0.00 0.00 0.00 3.67
2663 2686 1.207593 GCCACGAGTGATGTGTTGC 59.792 57.895 4.59 0.00 35.56 4.17
2670 2693 3.895232 AGTAGAATTGCCACGAGTGAT 57.105 42.857 4.59 0.00 0.00 3.06
2685 2708 4.927425 GTGAAGGTTATTGTCGCAAGTAGA 59.073 41.667 0.00 0.00 39.48 2.59
2723 2746 3.234353 TCAGTGCTATATCCTCCAGGTG 58.766 50.000 0.00 0.00 36.34 4.00
2741 2764 2.470362 CCTGCGCTTCCAGCATCAG 61.470 63.158 9.73 7.62 42.58 2.90
2856 2879 0.475906 CATCCTCCCACCTTCCCATC 59.524 60.000 0.00 0.00 0.00 3.51
2904 2927 5.238650 TGCAAACCAAGTAAGCTTCTTAGTC 59.761 40.000 0.00 0.00 31.49 2.59
2940 2963 2.226437 ACCAGTCGCAAAAGCTGTAATG 59.774 45.455 0.00 0.00 0.00 1.90
3152 3175 1.407656 AAACTGTCCGGCTCAGACCA 61.408 55.000 25.48 2.64 36.81 4.02
3208 3231 7.538575 AGCCAAACAATGTTCATTACAGATAC 58.461 34.615 0.00 0.00 40.83 2.24
3247 3270 9.549078 TTTTTCCCCAATGAATTAACAAGTAAC 57.451 29.630 0.00 0.00 0.00 2.50
3269 3292 8.474025 TGGAAGAATGAACTGTACAATGTTTTT 58.526 29.630 0.00 0.00 0.00 1.94
3293 3316 4.082300 TCAAATGAACATCCAACGGAATGG 60.082 41.667 0.00 0.00 42.12 3.16
3303 3326 5.474876 AGAGGTGTCTTTCAAATGAACATCC 59.525 40.000 0.00 0.00 33.13 3.51
3323 3350 7.572523 TTCAAATGCTAATCACCATTAGAGG 57.427 36.000 6.02 0.00 43.07 3.69
3340 3367 3.728864 CGTCCATTCTCGCCTTTCAAATG 60.729 47.826 0.00 0.00 0.00 2.32
3350 3377 1.065102 TGTAGCTACGTCCATTCTCGC 59.935 52.381 18.74 0.00 0.00 5.03
3391 3418 7.306632 GCTGTAGCTATGTTAAACCGTATTGAG 60.307 40.741 0.00 0.00 38.21 3.02
3394 3421 5.756833 GGCTGTAGCTATGTTAAACCGTATT 59.243 40.000 0.00 0.00 41.70 1.89
3479 3506 8.202137 TGTTTACCTAGCCTGTTGTATATCTTC 58.798 37.037 0.00 0.00 0.00 2.87
3483 3510 8.086143 TCTTGTTTACCTAGCCTGTTGTATAT 57.914 34.615 0.00 0.00 0.00 0.86
3484 3511 7.484993 TCTTGTTTACCTAGCCTGTTGTATA 57.515 36.000 0.00 0.00 0.00 1.47
3604 3633 7.934120 AGGTTAATCTGGTAGCATCATAAGAAC 59.066 37.037 0.00 0.00 0.00 3.01
3611 3640 5.894298 ATCAGGTTAATCTGGTAGCATCA 57.106 39.130 15.70 0.00 35.58 3.07
3612 3641 8.854614 AATTATCAGGTTAATCTGGTAGCATC 57.145 34.615 15.70 0.00 32.61 3.91
3614 3643 7.224297 GGAATTATCAGGTTAATCTGGTAGCA 58.776 38.462 15.70 0.00 32.61 3.49
3615 3644 6.655425 GGGAATTATCAGGTTAATCTGGTAGC 59.345 42.308 15.70 6.50 32.61 3.58
3616 3645 7.745717 TGGGAATTATCAGGTTAATCTGGTAG 58.254 38.462 15.70 0.00 32.61 3.18
3617 3646 7.699709 TGGGAATTATCAGGTTAATCTGGTA 57.300 36.000 15.70 10.31 35.58 3.25
3619 3648 7.013655 CACTTGGGAATTATCAGGTTAATCTGG 59.986 40.741 15.70 0.00 35.58 3.86
3620 3649 7.557719 ACACTTGGGAATTATCAGGTTAATCTG 59.442 37.037 9.62 9.62 36.17 2.90
3621 3650 7.557719 CACACTTGGGAATTATCAGGTTAATCT 59.442 37.037 0.00 0.00 0.00 2.40
3622 3651 7.556275 TCACACTTGGGAATTATCAGGTTAATC 59.444 37.037 0.00 0.00 0.00 1.75
3623 3652 7.410174 TCACACTTGGGAATTATCAGGTTAAT 58.590 34.615 0.00 0.00 0.00 1.40
3625 3654 6.381498 TCACACTTGGGAATTATCAGGTTA 57.619 37.500 0.00 0.00 0.00 2.85
3626 3655 5.255397 TCACACTTGGGAATTATCAGGTT 57.745 39.130 0.00 0.00 0.00 3.50
3627 3656 4.927267 TCACACTTGGGAATTATCAGGT 57.073 40.909 0.00 0.00 0.00 4.00
3630 3659 3.953612 GCCATCACACTTGGGAATTATCA 59.046 43.478 0.00 0.00 34.66 2.15
3632 3661 2.951642 CGCCATCACACTTGGGAATTAT 59.048 45.455 0.00 0.00 34.66 1.28
3634 3663 1.176527 CGCCATCACACTTGGGAATT 58.823 50.000 0.00 0.00 34.66 2.17
3635 3664 0.327924 TCGCCATCACACTTGGGAAT 59.672 50.000 0.00 0.00 34.66 3.01
3636 3665 0.327924 ATCGCCATCACACTTGGGAA 59.672 50.000 0.00 0.00 34.66 3.97
3638 3667 1.996786 GCATCGCCATCACACTTGGG 61.997 60.000 0.00 0.00 34.66 4.12
3639 3668 1.307355 TGCATCGCCATCACACTTGG 61.307 55.000 0.00 0.00 37.31 3.61
3640 3669 0.736636 ATGCATCGCCATCACACTTG 59.263 50.000 0.00 0.00 0.00 3.16
3641 3670 0.736636 CATGCATCGCCATCACACTT 59.263 50.000 0.00 0.00 0.00 3.16
3643 3672 0.248336 CACATGCATCGCCATCACAC 60.248 55.000 0.00 0.00 0.00 3.82
3644 3673 1.378124 CCACATGCATCGCCATCACA 61.378 55.000 0.00 0.00 0.00 3.58
3646 3675 1.824760 CCCACATGCATCGCCATCA 60.825 57.895 0.00 0.00 0.00 3.07
3647 3676 1.825191 ACCCACATGCATCGCCATC 60.825 57.895 0.00 0.00 0.00 3.51
3649 3678 2.751036 CACCCACATGCATCGCCA 60.751 61.111 0.00 0.00 0.00 5.69
3650 3679 4.197498 GCACCCACATGCATCGCC 62.197 66.667 0.00 0.00 45.39 5.54
3656 3685 1.247567 AGTAAACAGCACCCACATGC 58.752 50.000 0.00 0.00 46.50 4.06
3657 3686 2.228822 GGAAGTAAACAGCACCCACATG 59.771 50.000 0.00 0.00 0.00 3.21
3658 3687 2.108250 AGGAAGTAAACAGCACCCACAT 59.892 45.455 0.00 0.00 0.00 3.21
3659 3688 1.493022 AGGAAGTAAACAGCACCCACA 59.507 47.619 0.00 0.00 0.00 4.17
3660 3689 2.271944 AGGAAGTAAACAGCACCCAC 57.728 50.000 0.00 0.00 0.00 4.61
3661 3690 2.582052 CAAGGAAGTAAACAGCACCCA 58.418 47.619 0.00 0.00 0.00 4.51
3662 3691 1.886542 CCAAGGAAGTAAACAGCACCC 59.113 52.381 0.00 0.00 0.00 4.61
3663 3692 2.814336 CTCCAAGGAAGTAAACAGCACC 59.186 50.000 0.00 0.00 0.00 5.01
3664 3693 2.814336 CCTCCAAGGAAGTAAACAGCAC 59.186 50.000 0.00 0.00 37.67 4.40
3665 3694 2.814097 GCCTCCAAGGAAGTAAACAGCA 60.814 50.000 0.00 0.00 37.67 4.41
3666 3695 1.813178 GCCTCCAAGGAAGTAAACAGC 59.187 52.381 0.00 0.00 37.67 4.40
3668 3697 3.561313 GGATGCCTCCAAGGAAGTAAACA 60.561 47.826 2.72 0.00 41.64 2.83
3669 3698 3.017442 GGATGCCTCCAAGGAAGTAAAC 58.983 50.000 2.72 0.00 41.64 2.01
3670 3699 2.919602 AGGATGCCTCCAAGGAAGTAAA 59.080 45.455 10.92 0.00 44.79 2.01
3671 3700 2.562296 AGGATGCCTCCAAGGAAGTAA 58.438 47.619 10.92 0.00 44.79 2.24
3672 3701 2.239654 CAAGGATGCCTCCAAGGAAGTA 59.760 50.000 10.92 0.00 44.79 2.24
3674 3703 1.005215 ACAAGGATGCCTCCAAGGAAG 59.995 52.381 10.92 0.00 44.79 3.46
3675 3704 1.075601 ACAAGGATGCCTCCAAGGAA 58.924 50.000 10.92 0.00 44.79 3.36
3679 3708 1.702401 TGTACACAAGGATGCCTCCAA 59.298 47.619 10.92 0.00 44.79 3.53
3680 3709 1.278985 CTGTACACAAGGATGCCTCCA 59.721 52.381 10.92 0.00 44.79 3.86
3681 3710 1.279271 ACTGTACACAAGGATGCCTCC 59.721 52.381 0.00 0.00 42.43 4.30
3682 3711 2.289694 ACACTGTACACAAGGATGCCTC 60.290 50.000 0.00 0.00 30.89 4.70
3683 3712 1.699634 ACACTGTACACAAGGATGCCT 59.300 47.619 0.00 0.00 33.87 4.75
3684 3713 2.185004 ACACTGTACACAAGGATGCC 57.815 50.000 0.00 0.00 0.00 4.40
3685 3714 3.679980 CAGTACACTGTACACAAGGATGC 59.320 47.826 19.34 0.00 39.09 3.91
3686 3715 4.245660 CCAGTACACTGTACACAAGGATG 58.754 47.826 19.34 8.33 42.27 3.51
3687 3716 3.306780 GCCAGTACACTGTACACAAGGAT 60.307 47.826 19.34 0.00 42.27 3.24
3688 3717 2.036733 GCCAGTACACTGTACACAAGGA 59.963 50.000 19.34 0.00 42.27 3.36
3690 3719 2.058798 CGCCAGTACACTGTACACAAG 58.941 52.381 19.34 7.55 42.27 3.16
3691 3720 1.870580 GCGCCAGTACACTGTACACAA 60.871 52.381 19.34 0.00 42.27 3.33
3692 3721 0.319211 GCGCCAGTACACTGTACACA 60.319 55.000 19.34 0.00 42.27 3.72
3693 3722 0.038526 AGCGCCAGTACACTGTACAC 60.039 55.000 19.34 8.88 42.27 2.90
3694 3723 0.242825 GAGCGCCAGTACACTGTACA 59.757 55.000 19.34 0.00 42.27 2.90
3695 3724 0.458025 GGAGCGCCAGTACACTGTAC 60.458 60.000 2.29 10.90 42.27 2.90
3696 3725 0.611062 AGGAGCGCCAGTACACTGTA 60.611 55.000 9.88 0.00 42.27 2.74
3697 3726 1.878656 GAGGAGCGCCAGTACACTGT 61.879 60.000 9.88 0.00 42.27 3.55
3698 3727 1.153745 GAGGAGCGCCAGTACACTG 60.154 63.158 9.88 2.23 43.40 3.66
3699 3728 2.352032 GGAGGAGCGCCAGTACACT 61.352 63.158 9.88 0.00 36.29 3.55
3700 3729 2.184579 GGAGGAGCGCCAGTACAC 59.815 66.667 9.88 0.00 36.29 2.90
3701 3730 3.075005 GGGAGGAGCGCCAGTACA 61.075 66.667 9.88 0.00 36.29 2.90
3710 3739 1.537643 CATAGGGGAGGGGAGGAGC 60.538 68.421 0.00 0.00 0.00 4.70
3712 3741 1.632269 ACCATAGGGGAGGGGAGGA 60.632 63.158 0.00 0.00 41.15 3.71
3714 3743 1.152008 GGACCATAGGGGAGGGGAG 60.152 68.421 0.00 0.00 41.15 4.30
3715 3744 1.542093 TTGGACCATAGGGGAGGGGA 61.542 60.000 0.00 0.00 41.15 4.81
3716 3745 1.005556 TTGGACCATAGGGGAGGGG 59.994 63.158 0.00 0.00 41.15 4.79
3718 3747 0.695803 AGCTTGGACCATAGGGGAGG 60.696 60.000 0.00 0.00 41.15 4.30
3720 3749 1.635817 GCAGCTTGGACCATAGGGGA 61.636 60.000 0.00 0.00 41.15 4.81
3722 3751 0.034186 TTGCAGCTTGGACCATAGGG 60.034 55.000 0.00 0.00 41.29 3.53
3724 3753 1.741706 CACTTGCAGCTTGGACCATAG 59.258 52.381 0.00 0.00 0.00 2.23
3725 3754 1.350684 TCACTTGCAGCTTGGACCATA 59.649 47.619 0.00 0.00 0.00 2.74
3728 3757 1.032014 TTTCACTTGCAGCTTGGACC 58.968 50.000 0.00 0.00 0.00 4.46
3730 3759 1.032014 GGTTTCACTTGCAGCTTGGA 58.968 50.000 0.00 0.00 0.00 3.53
3731 3760 1.000938 GAGGTTTCACTTGCAGCTTGG 60.001 52.381 0.00 0.00 0.00 3.61
3744 3993 8.689972 ACATGAATTAAATGGATCTGAGGTTTC 58.310 33.333 0.00 0.00 0.00 2.78
3745 3994 8.599624 ACATGAATTAAATGGATCTGAGGTTT 57.400 30.769 0.00 0.00 0.00 3.27
3746 3995 8.599624 AACATGAATTAAATGGATCTGAGGTT 57.400 30.769 0.00 0.00 0.00 3.50
3747 3996 9.699410 TTAACATGAATTAAATGGATCTGAGGT 57.301 29.630 0.00 0.00 0.00 3.85
3750 3999 9.699410 ACCTTAACATGAATTAAATGGATCTGA 57.301 29.630 0.00 0.00 0.00 3.27
3781 4030 9.319143 CCCGCATTTTCATATTAAATTTGGTTA 57.681 29.630 0.00 0.00 0.00 2.85
3783 4032 6.765512 CCCCGCATTTTCATATTAAATTTGGT 59.234 34.615 0.00 0.00 0.00 3.67
3784 4033 6.204495 CCCCCGCATTTTCATATTAAATTTGG 59.796 38.462 0.00 0.00 0.00 3.28
3785 4034 6.989169 TCCCCCGCATTTTCATATTAAATTTG 59.011 34.615 0.00 0.00 0.00 2.32
3786 4035 7.130681 TCCCCCGCATTTTCATATTAAATTT 57.869 32.000 0.00 0.00 0.00 1.82
3787 4036 6.739331 TCCCCCGCATTTTCATATTAAATT 57.261 33.333 0.00 0.00 0.00 1.82
3789 4038 6.739331 ATTCCCCCGCATTTTCATATTAAA 57.261 33.333 0.00 0.00 0.00 1.52
3792 4041 6.933514 ATTATTCCCCCGCATTTTCATATT 57.066 33.333 0.00 0.00 0.00 1.28
3793 4042 6.933514 AATTATTCCCCCGCATTTTCATAT 57.066 33.333 0.00 0.00 0.00 1.78
3795 4044 5.628797 AAATTATTCCCCCGCATTTTCAT 57.371 34.783 0.00 0.00 0.00 2.57
3796 4045 5.428184 AAAATTATTCCCCCGCATTTTCA 57.572 34.783 0.00 0.00 0.00 2.69
3797 4046 6.811954 TCTAAAATTATTCCCCCGCATTTTC 58.188 36.000 0.00 0.00 31.25 2.29
3798 4047 6.800072 TCTAAAATTATTCCCCCGCATTTT 57.200 33.333 0.00 0.00 32.95 1.82
3801 4050 5.892348 AGATCTAAAATTATTCCCCCGCAT 58.108 37.500 0.00 0.00 0.00 4.73
3802 4051 5.319043 AGATCTAAAATTATTCCCCCGCA 57.681 39.130 0.00 0.00 0.00 5.69
3803 4052 6.318900 CCATAGATCTAAAATTATTCCCCCGC 59.681 42.308 6.52 0.00 0.00 6.13
3804 4053 6.828785 CCCATAGATCTAAAATTATTCCCCCG 59.171 42.308 6.52 0.00 0.00 5.73
3805 4054 7.615757 CACCCATAGATCTAAAATTATTCCCCC 59.384 40.741 6.52 0.00 0.00 5.40
3806 4055 8.170730 ACACCCATAGATCTAAAATTATTCCCC 58.829 37.037 6.52 0.00 0.00 4.81
3807 4056 9.014297 CACACCCATAGATCTAAAATTATTCCC 57.986 37.037 6.52 0.00 0.00 3.97
3811 4060 9.920946 ACAACACACCCATAGATCTAAAATTAT 57.079 29.630 6.52 0.00 0.00 1.28
3812 4061 9.173021 CACAACACACCCATAGATCTAAAATTA 57.827 33.333 6.52 0.00 0.00 1.40
3814 4063 6.095440 GCACAACACACCCATAGATCTAAAAT 59.905 38.462 6.52 0.00 0.00 1.82
3815 4064 5.414454 GCACAACACACCCATAGATCTAAAA 59.586 40.000 6.52 0.00 0.00 1.52
3817 4066 4.019771 TGCACAACACACCCATAGATCTAA 60.020 41.667 6.52 0.00 0.00 2.10
3818 4067 3.517500 TGCACAACACACCCATAGATCTA 59.482 43.478 4.57 4.57 0.00 1.98
3819 4068 2.305635 TGCACAACACACCCATAGATCT 59.694 45.455 0.00 0.00 0.00 2.75
3820 4069 2.710377 TGCACAACACACCCATAGATC 58.290 47.619 0.00 0.00 0.00 2.75
3821 4070 2.877097 TGCACAACACACCCATAGAT 57.123 45.000 0.00 0.00 0.00 1.98
3832 4081 1.129624 GTTGACGTTCAGTGCACAACA 59.870 47.619 21.04 5.18 37.90 3.33
3834 4083 1.443802 TGTTGACGTTCAGTGCACAA 58.556 45.000 21.04 1.96 0.00 3.33
3835 4084 1.597195 GATGTTGACGTTCAGTGCACA 59.403 47.619 21.04 0.00 0.00 4.57
3836 4085 1.597195 TGATGTTGACGTTCAGTGCAC 59.403 47.619 9.40 9.40 0.00 4.57
3837 4086 1.866601 CTGATGTTGACGTTCAGTGCA 59.133 47.619 6.11 0.00 0.00 4.57
3839 4088 3.555547 TGAACTGATGTTGACGTTCAGTG 59.444 43.478 17.98 0.00 40.33 3.66
3840 4089 3.792401 TGAACTGATGTTGACGTTCAGT 58.208 40.909 12.88 12.88 40.33 3.41
3842 4091 4.024977 CACATGAACTGATGTTGACGTTCA 60.025 41.667 0.00 6.21 46.50 3.18
3843 4092 4.024893 ACACATGAACTGATGTTGACGTTC 60.025 41.667 0.00 0.00 34.18 3.95
3847 4096 6.299023 TGTTACACATGAACTGATGTTGAC 57.701 37.500 0.00 0.00 34.18 3.18
3848 4097 6.317391 TGTTGTTACACATGAACTGATGTTGA 59.683 34.615 0.00 0.00 34.18 3.18
3849 4098 6.493978 TGTTGTTACACATGAACTGATGTTG 58.506 36.000 0.00 0.00 34.18 3.33
3850 4099 6.691754 TGTTGTTACACATGAACTGATGTT 57.308 33.333 0.00 0.00 34.18 2.71
3852 4101 7.648908 ACATTTGTTGTTACACATGAACTGATG 59.351 33.333 0.00 4.02 42.43 3.07
3853 4102 7.648908 CACATTTGTTGTTACACATGAACTGAT 59.351 33.333 0.00 0.00 42.43 2.90
3854 4103 6.971756 CACATTTGTTGTTACACATGAACTGA 59.028 34.615 0.00 0.00 42.43 3.41
3855 4104 6.751425 ACACATTTGTTGTTACACATGAACTG 59.249 34.615 0.00 0.00 42.43 3.16
3856 4105 6.862209 ACACATTTGTTGTTACACATGAACT 58.138 32.000 0.00 0.00 42.43 3.01
3857 4106 7.518731 AACACATTTGTTGTTACACATGAAC 57.481 32.000 0.00 0.00 44.66 3.18
3858 4107 7.814587 TCAAACACATTTGTTGTTACACATGAA 59.185 29.630 0.00 0.00 45.69 2.57
3859 4108 7.315890 TCAAACACATTTGTTGTTACACATGA 58.684 30.769 0.00 0.00 45.69 3.07
3860 4109 7.275341 ACTCAAACACATTTGTTGTTACACATG 59.725 33.333 0.00 0.00 45.69 3.21
3861 4110 7.275341 CACTCAAACACATTTGTTGTTACACAT 59.725 33.333 0.00 0.00 45.69 3.21
3862 4111 6.584184 CACTCAAACACATTTGTTGTTACACA 59.416 34.615 0.00 0.00 45.69 3.72
3863 4112 6.804295 TCACTCAAACACATTTGTTGTTACAC 59.196 34.615 0.00 0.00 45.69 2.90
3864 4113 6.914259 TCACTCAAACACATTTGTTGTTACA 58.086 32.000 0.00 0.00 45.69 2.41
3865 4114 6.020678 GCTCACTCAAACACATTTGTTGTTAC 60.021 38.462 0.00 0.00 45.69 2.50
3866 4115 6.033341 GCTCACTCAAACACATTTGTTGTTA 58.967 36.000 0.00 0.00 45.69 2.41
3867 4116 4.864247 GCTCACTCAAACACATTTGTTGTT 59.136 37.500 0.00 0.00 45.69 2.83
3868 4117 4.423732 GCTCACTCAAACACATTTGTTGT 58.576 39.130 0.00 0.00 45.69 3.32
3869 4118 3.798337 GGCTCACTCAAACACATTTGTTG 59.202 43.478 0.00 0.00 45.69 3.33
3871 4120 3.023119 TGGCTCACTCAAACACATTTGT 58.977 40.909 0.09 0.00 44.76 2.83
3872 4121 3.713858 TGGCTCACTCAAACACATTTG 57.286 42.857 0.00 0.00 45.67 2.32
3873 4122 4.942761 AATGGCTCACTCAAACACATTT 57.057 36.364 0.00 0.00 0.00 2.32
3874 4123 4.341806 TCAAATGGCTCACTCAAACACATT 59.658 37.500 0.00 0.00 0.00 2.71
3875 4124 3.890756 TCAAATGGCTCACTCAAACACAT 59.109 39.130 0.00 0.00 0.00 3.21
3876 4125 3.286353 TCAAATGGCTCACTCAAACACA 58.714 40.909 0.00 0.00 0.00 3.72
3877 4126 3.316308 ACTCAAATGGCTCACTCAAACAC 59.684 43.478 0.00 0.00 0.00 3.32
3878 4127 3.554934 ACTCAAATGGCTCACTCAAACA 58.445 40.909 0.00 0.00 0.00 2.83
3879 4128 3.565482 TGACTCAAATGGCTCACTCAAAC 59.435 43.478 0.00 0.00 0.00 2.93
3880 4129 3.565482 GTGACTCAAATGGCTCACTCAAA 59.435 43.478 0.00 0.00 31.99 2.69
3881 4130 3.141398 GTGACTCAAATGGCTCACTCAA 58.859 45.455 0.00 0.00 31.99 3.02
3882 4131 2.369860 AGTGACTCAAATGGCTCACTCA 59.630 45.455 7.62 0.00 39.30 3.41
3883 4132 3.051081 AGTGACTCAAATGGCTCACTC 57.949 47.619 7.62 0.00 39.30 3.51
3884 4133 2.369860 TGAGTGACTCAAATGGCTCACT 59.630 45.455 13.74 11.39 44.81 3.41
3885 4134 2.771089 TGAGTGACTCAAATGGCTCAC 58.229 47.619 13.74 0.00 37.57 3.51
3886 4135 3.490439 TTGAGTGACTCAAATGGCTCA 57.510 42.857 24.40 0.15 45.84 4.26
3893 4142 6.657541 AACCTAAGTTGTTTGAGTGACTCAAA 59.342 34.615 30.67 30.67 46.47 2.69
3894 4143 5.741011 ACCTAAGTTGTTTGAGTGACTCAA 58.259 37.500 23.02 23.02 46.93 3.02
3895 4144 5.353394 ACCTAAGTTGTTTGAGTGACTCA 57.647 39.130 11.93 11.93 38.87 3.41
3896 4145 6.679327 AAACCTAAGTTGTTTGAGTGACTC 57.321 37.500 5.47 5.47 35.97 3.36
3897 4146 8.747538 ATAAAACCTAAGTTGTTTGAGTGACT 57.252 30.769 0.00 0.00 36.14 3.41
3920 4169 9.661563 ACAACACTGGAGTTTTCGATTAATATA 57.338 29.630 0.00 0.00 0.00 0.86
3921 4170 8.561738 ACAACACTGGAGTTTTCGATTAATAT 57.438 30.769 0.00 0.00 0.00 1.28
3922 4171 7.972832 ACAACACTGGAGTTTTCGATTAATA 57.027 32.000 0.00 0.00 0.00 0.98
3923 4172 6.877611 ACAACACTGGAGTTTTCGATTAAT 57.122 33.333 0.00 0.00 0.00 1.40
3924 4173 7.211573 TCTACAACACTGGAGTTTTCGATTAA 58.788 34.615 0.00 0.00 34.73 1.40
3925 4174 6.751157 TCTACAACACTGGAGTTTTCGATTA 58.249 36.000 0.00 0.00 34.73 1.75
3926 4175 5.607477 TCTACAACACTGGAGTTTTCGATT 58.393 37.500 0.00 0.00 34.73 3.34
3927 4176 5.209818 TCTACAACACTGGAGTTTTCGAT 57.790 39.130 0.00 0.00 34.73 3.59
3928 4177 4.659111 TCTACAACACTGGAGTTTTCGA 57.341 40.909 0.00 0.00 34.73 3.71
3929 4178 5.230942 AGATCTACAACACTGGAGTTTTCG 58.769 41.667 0.00 0.00 34.73 3.46
3930 4179 7.873505 ACTTAGATCTACAACACTGGAGTTTTC 59.126 37.037 0.67 0.00 34.73 2.29
3931 4180 7.736893 ACTTAGATCTACAACACTGGAGTTTT 58.263 34.615 0.67 0.00 34.73 2.43
3932 4181 7.304497 ACTTAGATCTACAACACTGGAGTTT 57.696 36.000 0.67 0.00 34.73 2.66
3933 4182 6.919775 ACTTAGATCTACAACACTGGAGTT 57.080 37.500 0.67 0.00 34.73 3.01
3934 4183 6.295349 CCAACTTAGATCTACAACACTGGAGT 60.295 42.308 0.67 0.00 34.73 3.85
3935 4184 6.102663 CCAACTTAGATCTACAACACTGGAG 58.897 44.000 0.67 0.00 34.38 3.86
3936 4185 5.046591 CCCAACTTAGATCTACAACACTGGA 60.047 44.000 0.67 0.00 0.00 3.86
3937 4186 5.178797 CCCAACTTAGATCTACAACACTGG 58.821 45.833 0.67 4.11 0.00 4.00
3938 4187 5.639506 CACCCAACTTAGATCTACAACACTG 59.360 44.000 0.67 0.00 0.00 3.66
3939 4188 5.307196 ACACCCAACTTAGATCTACAACACT 59.693 40.000 0.67 0.00 0.00 3.55
3940 4189 5.548406 ACACCCAACTTAGATCTACAACAC 58.452 41.667 0.67 0.00 0.00 3.32
3941 4190 5.818678 ACACCCAACTTAGATCTACAACA 57.181 39.130 0.67 0.00 0.00 3.33
3942 4191 6.338937 CCTACACCCAACTTAGATCTACAAC 58.661 44.000 0.67 0.00 0.00 3.32
3943 4192 5.424252 CCCTACACCCAACTTAGATCTACAA 59.576 44.000 0.67 0.00 0.00 2.41
3944 4193 4.960469 CCCTACACCCAACTTAGATCTACA 59.040 45.833 0.67 0.00 0.00 2.74
3945 4194 5.206587 TCCCTACACCCAACTTAGATCTAC 58.793 45.833 0.67 0.00 0.00 2.59
3946 4195 5.476950 TCCCTACACCCAACTTAGATCTA 57.523 43.478 0.00 0.00 0.00 1.98
3947 4196 4.348020 TCCCTACACCCAACTTAGATCT 57.652 45.455 0.00 0.00 0.00 2.75
3948 4197 4.470304 AGTTCCCTACACCCAACTTAGATC 59.530 45.833 0.00 0.00 0.00 2.75
3955 4204 1.558294 CCCTAGTTCCCTACACCCAAC 59.442 57.143 0.00 0.00 0.00 3.77
3956 4205 1.437945 TCCCTAGTTCCCTACACCCAA 59.562 52.381 0.00 0.00 0.00 4.12
3960 4209 2.564504 ACGTTTCCCTAGTTCCCTACAC 59.435 50.000 0.00 0.00 0.00 2.90
3961 4210 2.564062 CACGTTTCCCTAGTTCCCTACA 59.436 50.000 0.00 0.00 0.00 2.74
3966 4215 0.035739 TGCCACGTTTCCCTAGTTCC 59.964 55.000 0.00 0.00 0.00 3.62
3969 4218 1.276622 AGATGCCACGTTTCCCTAGT 58.723 50.000 0.00 0.00 0.00 2.57
3970 4219 2.403252 AAGATGCCACGTTTCCCTAG 57.597 50.000 0.00 0.00 0.00 3.02
3971 4220 2.871096 AAAGATGCCACGTTTCCCTA 57.129 45.000 0.00 0.00 0.00 3.53
3972 4221 1.995376 AAAAGATGCCACGTTTCCCT 58.005 45.000 0.00 0.00 0.00 4.20
3973 4222 2.812358 AAAAAGATGCCACGTTTCCC 57.188 45.000 0.00 0.00 0.00 3.97
3990 4239 5.068855 TCAGCACCACAATCATTCTGAAAAA 59.931 36.000 0.00 0.00 0.00 1.94
3991 4240 4.583907 TCAGCACCACAATCATTCTGAAAA 59.416 37.500 0.00 0.00 0.00 2.29
3992 4241 4.143543 TCAGCACCACAATCATTCTGAAA 58.856 39.130 0.00 0.00 0.00 2.69
3993 4242 3.753815 TCAGCACCACAATCATTCTGAA 58.246 40.909 0.00 0.00 0.00 3.02
3994 4243 3.421919 TCAGCACCACAATCATTCTGA 57.578 42.857 0.00 0.00 0.00 3.27
3995 4244 3.504906 AGTTCAGCACCACAATCATTCTG 59.495 43.478 0.00 0.00 0.00 3.02
3997 4246 4.510038 AAGTTCAGCACCACAATCATTC 57.490 40.909 0.00 0.00 0.00 2.67
3998 4247 4.942761 AAAGTTCAGCACCACAATCATT 57.057 36.364 0.00 0.00 0.00 2.57
3999 4248 4.460382 CCTAAAGTTCAGCACCACAATCAT 59.540 41.667 0.00 0.00 0.00 2.45
4000 4249 3.820467 CCTAAAGTTCAGCACCACAATCA 59.180 43.478 0.00 0.00 0.00 2.57
4002 4251 4.074970 CTCCTAAAGTTCAGCACCACAAT 58.925 43.478 0.00 0.00 0.00 2.71
4003 4252 3.135712 TCTCCTAAAGTTCAGCACCACAA 59.864 43.478 0.00 0.00 0.00 3.33
4004 4253 2.703536 TCTCCTAAAGTTCAGCACCACA 59.296 45.455 0.00 0.00 0.00 4.17
4005 4254 3.402628 TCTCCTAAAGTTCAGCACCAC 57.597 47.619 0.00 0.00 0.00 4.16
4006 4255 4.777896 AGTATCTCCTAAAGTTCAGCACCA 59.222 41.667 0.00 0.00 0.00 4.17
4008 4257 5.967088 TCAGTATCTCCTAAAGTTCAGCAC 58.033 41.667 0.00 0.00 0.00 4.40
4029 4278 9.630098 GCAAATCAAGTTCTCTCAAATATTTCA 57.370 29.630 0.00 0.00 0.00 2.69
4030 4279 9.630098 TGCAAATCAAGTTCTCTCAAATATTTC 57.370 29.630 0.00 0.00 0.00 2.17
4031 4280 9.415544 GTGCAAATCAAGTTCTCTCAAATATTT 57.584 29.630 0.00 0.00 0.00 1.40
4033 4282 8.114331 TGTGCAAATCAAGTTCTCTCAAATAT 57.886 30.769 0.00 0.00 0.00 1.28
4034 4283 7.509141 TGTGCAAATCAAGTTCTCTCAAATA 57.491 32.000 0.00 0.00 0.00 1.40
4035 4284 6.395426 TGTGCAAATCAAGTTCTCTCAAAT 57.605 33.333 0.00 0.00 0.00 2.32
4037 4286 4.261322 GCTGTGCAAATCAAGTTCTCTCAA 60.261 41.667 0.00 0.00 0.00 3.02
4039 4288 3.251729 TGCTGTGCAAATCAAGTTCTCTC 59.748 43.478 0.00 0.00 34.76 3.20
4040 4289 3.216800 TGCTGTGCAAATCAAGTTCTCT 58.783 40.909 0.00 0.00 34.76 3.10
4041 4290 3.631145 TGCTGTGCAAATCAAGTTCTC 57.369 42.857 0.00 0.00 34.76 2.87
4042 4291 4.520111 TGTATGCTGTGCAAATCAAGTTCT 59.480 37.500 0.00 0.00 43.62 3.01
4046 4295 4.548494 TGTTGTATGCTGTGCAAATCAAG 58.452 39.130 0.00 0.00 43.62 3.02
4047 4296 4.581077 TGTTGTATGCTGTGCAAATCAA 57.419 36.364 0.00 0.72 43.62 2.57
4048 4297 4.022155 ACATGTTGTATGCTGTGCAAATCA 60.022 37.500 0.00 0.00 43.62 2.57
4050 4299 4.487948 GACATGTTGTATGCTGTGCAAAT 58.512 39.130 0.00 0.00 43.62 2.32
4051 4300 3.305267 GGACATGTTGTATGCTGTGCAAA 60.305 43.478 0.00 0.00 43.62 3.68
4052 4301 2.228582 GGACATGTTGTATGCTGTGCAA 59.771 45.455 0.00 0.00 43.62 4.08
4053 4302 1.811965 GGACATGTTGTATGCTGTGCA 59.188 47.619 0.00 0.00 44.86 4.57
4054 4303 1.133025 GGGACATGTTGTATGCTGTGC 59.867 52.381 0.00 0.00 0.00 4.57
4057 4306 1.392589 GGGGGACATGTTGTATGCTG 58.607 55.000 0.00 0.00 0.00 4.41
4058 4307 3.903208 GGGGGACATGTTGTATGCT 57.097 52.632 0.00 0.00 0.00 3.79
4112 7530 6.052360 TCTTACATGTAACTGTGCAAGTCAA 58.948 36.000 14.35 0.00 38.56 3.18
4113 7531 5.606505 TCTTACATGTAACTGTGCAAGTCA 58.393 37.500 14.35 0.00 38.56 3.41
4114 7532 6.368791 TGATCTTACATGTAACTGTGCAAGTC 59.631 38.462 14.35 5.60 38.56 3.01
4115 7533 6.230472 TGATCTTACATGTAACTGTGCAAGT 58.770 36.000 14.35 0.00 42.60 3.16
4116 7534 6.726258 TGATCTTACATGTAACTGTGCAAG 57.274 37.500 14.35 4.42 0.00 4.01
4124 7542 8.540492 CAGGTCGTATTTGATCTTACATGTAAC 58.460 37.037 14.35 6.03 0.00 2.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.