Multiple sequence alignment - TraesCS3D01G455000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G455000 chr3D 100.000 7483 0 0 1 7483 561453193 561445711 0.000000e+00 13819.0
1 TraesCS3D01G455000 chr3D 97.085 446 13 0 6524 6969 374726423 374726868 0.000000e+00 752.0
2 TraesCS3D01G455000 chr3D 96.644 447 14 1 6522 6968 424697769 424698214 0.000000e+00 741.0
3 TraesCS3D01G455000 chr3B 92.071 2434 129 19 962 3384 748623582 748621202 0.000000e+00 3367.0
4 TraesCS3D01G455000 chr3B 93.390 1770 63 22 4779 6524 748619573 748617834 0.000000e+00 2571.0
5 TraesCS3D01G455000 chr3B 91.160 1414 83 17 3374 4779 748621176 748619797 0.000000e+00 1881.0
6 TraesCS3D01G455000 chr3B 89.833 1318 111 8 1537 2838 748464396 748463086 0.000000e+00 1670.0
7 TraesCS3D01G455000 chr3B 84.757 925 121 10 3940 4855 748461912 748460999 0.000000e+00 909.0
8 TraesCS3D01G455000 chr3B 84.254 851 58 29 5701 6524 748458691 748457890 0.000000e+00 760.0
9 TraesCS3D01G455000 chr3B 95.249 442 21 0 7042 7483 748617705 748617264 0.000000e+00 701.0
10 TraesCS3D01G455000 chr3B 83.659 716 77 20 267 954 748775958 748775255 8.190000e-179 638.0
11 TraesCS3D01G455000 chr3B 92.629 407 24 5 2963 3368 748462836 748462435 1.400000e-161 580.0
12 TraesCS3D01G455000 chr3B 83.836 464 47 16 4848 5285 748460322 748459861 4.180000e-112 416.0
13 TraesCS3D01G455000 chr3B 85.324 293 20 7 1 293 748776237 748775968 1.590000e-71 281.0
14 TraesCS3D01G455000 chr3B 85.938 256 28 5 3374 3621 748462398 748462143 4.450000e-67 267.0
15 TraesCS3D01G455000 chr3B 86.932 176 17 3 7169 7340 748456313 748456140 7.660000e-45 193.0
16 TraesCS3D01G455000 chr3B 98.507 67 1 0 7417 7483 748455898 748455832 1.320000e-22 119.0
17 TraesCS3D01G455000 chr3B 78.421 190 9 14 1 190 748626054 748625897 2.220000e-15 95.3
18 TraesCS3D01G455000 chr3B 93.220 59 3 1 6968 7026 748617834 748617777 1.340000e-12 86.1
19 TraesCS3D01G455000 chr3B 95.918 49 2 0 962 1010 748774851 748774803 6.220000e-11 80.5
20 TraesCS3D01G455000 chr3A 94.573 1861 88 5 1531 3384 697386208 697384354 0.000000e+00 2865.0
21 TraesCS3D01G455000 chr3A 92.500 1880 102 20 3773 5621 697379528 697377657 0.000000e+00 2654.0
22 TraesCS3D01G455000 chr3A 91.720 1256 92 5 1637 2882 697284945 697283692 0.000000e+00 1733.0
23 TraesCS3D01G455000 chr3A 95.626 823 27 3 5702 6524 697377606 697376793 0.000000e+00 1312.0
24 TraesCS3D01G455000 chr3A 84.488 967 75 33 1 955 697388176 697387273 0.000000e+00 885.0
25 TraesCS3D01G455000 chr3A 85.647 850 54 27 5695 6524 697281654 697280853 0.000000e+00 832.0
26 TraesCS3D01G455000 chr3A 91.408 547 40 6 4995 5536 697282243 697281699 0.000000e+00 743.0
27 TraesCS3D01G455000 chr3A 95.085 468 19 2 7016 7483 697376671 697376208 0.000000e+00 734.0
28 TraesCS3D01G455000 chr3A 95.332 407 16 2 2963 3368 697283494 697283090 1.760000e-180 643.0
29 TraesCS3D01G455000 chr3A 85.237 569 41 12 962 1518 697386867 697386330 5.110000e-151 545.0
30 TraesCS3D01G455000 chr3A 95.796 333 12 2 3374 3705 697384328 697383997 3.070000e-148 536.0
31 TraesCS3D01G455000 chr3A 92.000 250 17 2 3374 3620 697283053 697282804 1.550000e-91 348.0
32 TraesCS3D01G455000 chr3A 100.000 49 0 0 6968 7016 697376793 697376745 2.880000e-14 91.6
33 TraesCS3D01G455000 chr3A 94.545 55 3 0 3701 3755 697379575 697379521 1.340000e-12 86.1
34 TraesCS3D01G455000 chr3A 86.842 76 1 1 7417 7483 697279608 697279533 8.050000e-10 76.8
35 TraesCS3D01G455000 chr3A 95.745 47 2 0 6977 7023 697280819 697280773 8.050000e-10 76.8
36 TraesCS3D01G455000 chr7D 89.337 694 70 3 1717 2410 235373622 235374311 0.000000e+00 869.0
37 TraesCS3D01G455000 chr7D 97.788 452 8 2 6519 6968 126465664 126465213 0.000000e+00 778.0
38 TraesCS3D01G455000 chr7D 97.098 448 10 1 6523 6970 21265508 21265952 0.000000e+00 752.0
39 TraesCS3D01G455000 chr7D 79.494 751 81 34 2577 3284 235375418 235376138 4.090000e-127 466.0
40 TraesCS3D01G455000 chr7D 76.874 787 122 32 5243 6001 235376591 235377345 2.530000e-104 390.0
41 TraesCS3D01G455000 chr7D 86.179 123 16 1 3374 3495 235376303 235376425 1.690000e-26 132.0
42 TraesCS3D01G455000 chr7B 90.523 612 55 2 1717 2328 211372238 211372846 0.000000e+00 806.0
43 TraesCS3D01G455000 chr7B 79.845 774 83 37 2549 3284 211373030 211373768 1.450000e-136 497.0
44 TraesCS3D01G455000 chr7B 77.637 711 110 27 5308 6001 211374291 211374969 3.270000e-103 387.0
45 TraesCS3D01G455000 chr7B 82.787 122 21 0 3374 3495 211373925 211374046 7.940000e-20 110.0
46 TraesCS3D01G455000 chr7A 90.523 612 55 2 1717 2328 250215076 250215684 0.000000e+00 806.0
47 TraesCS3D01G455000 chr7A 77.099 786 121 32 5243 6001 250217054 250217807 4.210000e-107 399.0
48 TraesCS3D01G455000 chr7A 84.790 309 36 9 2976 3284 250216310 250216607 4.390000e-77 300.0
49 TraesCS3D01G455000 chr7A 83.607 122 20 0 3374 3495 250216765 250216886 1.710000e-21 115.0
50 TraesCS3D01G455000 chr4D 98.004 451 8 1 6523 6972 274544474 274544024 0.000000e+00 782.0
51 TraesCS3D01G455000 chr4D 97.556 450 10 1 6524 6972 398727923 398728372 0.000000e+00 769.0
52 TraesCS3D01G455000 chr1D 97.539 447 10 1 6523 6968 243480276 243479830 0.000000e+00 763.0
53 TraesCS3D01G455000 chr1D 96.429 448 14 2 6523 6969 344610560 344611006 0.000000e+00 737.0
54 TraesCS3D01G455000 chr1D 77.654 179 32 8 4404 4579 379479822 379479649 1.330000e-17 102.0
55 TraesCS3D01G455000 chr5D 94.828 464 21 2 6509 6969 435932143 435932606 0.000000e+00 721.0
56 TraesCS3D01G455000 chr5D 75.904 249 55 4 4999 5244 10073084 10073330 1.020000e-23 122.0
57 TraesCS3D01G455000 chr2B 85.593 118 15 2 5126 5242 781817542 781817426 1.020000e-23 122.0
58 TraesCS3D01G455000 chr2B 97.059 34 1 0 5208 5241 103729223 103729190 2.920000e-04 58.4
59 TraesCS3D01G455000 chr4B 87.692 65 7 1 4908 4972 4542833 4542896 2.900000e-09 75.0
60 TraesCS3D01G455000 chr6D 96.970 33 1 0 5205 5237 163321556 163321588 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G455000 chr3D 561445711 561453193 7482 True 13819.000000 13819 100.000000 1 7483 1 chr3D.!!$R1 7482
1 TraesCS3D01G455000 chr3B 748617264 748626054 8790 True 1450.233333 3367 90.585167 1 7483 6 chr3B.!!$R2 7482
2 TraesCS3D01G455000 chr3B 748455832 748464396 8564 True 614.250000 1670 88.335750 1537 7483 8 chr3B.!!$R1 5946
3 TraesCS3D01G455000 chr3B 748774803 748776237 1434 True 333.166667 638 88.300333 1 1010 3 chr3B.!!$R3 1009
4 TraesCS3D01G455000 chr3A 697383997 697388176 4179 True 1207.750000 2865 90.023500 1 3705 4 chr3A.!!$R3 3704
5 TraesCS3D01G455000 chr3A 697376208 697379575 3367 True 975.540000 2654 95.551200 3701 7483 5 chr3A.!!$R2 3782
6 TraesCS3D01G455000 chr3A 697279533 697284945 5412 True 636.085714 1733 91.242000 1637 7483 7 chr3A.!!$R1 5846
7 TraesCS3D01G455000 chr7D 235373622 235377345 3723 False 464.250000 869 82.971000 1717 6001 4 chr7D.!!$F2 4284
8 TraesCS3D01G455000 chr7B 211372238 211374969 2731 False 450.000000 806 82.698000 1717 6001 4 chr7B.!!$F1 4284
9 TraesCS3D01G455000 chr7A 250215076 250217807 2731 False 405.000000 806 84.004750 1717 6001 4 chr7A.!!$F1 4284

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
109 111 0.109597 GGGCATGTTGTTGCTCTTCG 60.110 55.000 0.00 0.00 40.09 3.79 F
734 1535 0.179468 GCGTGGAATAGTAGCCCCAA 59.821 55.000 0.00 0.00 0.00 4.12 F
1139 2843 0.469917 TTCTCCAATCGGCAGGGATC 59.530 55.000 0.00 0.00 0.00 3.36 F
1343 3053 1.201647 CTGACGAAGCTCCGGTAAGAA 59.798 52.381 0.00 0.00 0.00 2.52 F
2306 4131 1.867233 CCAATAGGAACAATCGGCGAG 59.133 52.381 17.22 4.99 36.89 5.03 F
3180 6251 2.299013 TGCGACTGTGTTATCTGACCTT 59.701 45.455 0.00 0.00 0.00 3.50 F
4701 8042 0.536460 GGCTCCGGGTGAAAAGTGAA 60.536 55.000 0.00 0.00 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1910 3735 0.040067 CAACAAGGCAGCCGTTCTTC 60.040 55.000 5.55 0.00 0.00 2.87 R
2229 4054 0.036306 TCTCCCGGAGACTTTTTGGC 59.964 55.000 13.54 0.00 33.35 4.52 R
2252 4077 1.583556 TGTGCCCACCATAGATGTCT 58.416 50.000 0.00 0.00 0.00 3.41 R
3180 6251 4.460263 GCATATATTGTCCAGGACCACAA 58.540 43.478 17.59 5.89 36.94 3.33 R
3450 6602 0.460987 CCTGACTTCCATCCGCAGAC 60.461 60.000 0.00 0.00 0.00 3.51 R
5060 9533 0.653636 GAGACGCAACACCGAACAAA 59.346 50.000 0.00 0.00 0.00 2.83 R
6674 12105 0.035534 CCGACCATCAATCACCACCA 60.036 55.000 0.00 0.00 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 37 5.690865 ACTCATTCTTTTCCCTGTACACAA 58.309 37.500 0.00 0.00 0.00 3.33
100 102 1.271926 GGGTGTAAGAGGGCATGTTGT 60.272 52.381 0.00 0.00 0.00 3.32
101 103 2.514803 GGTGTAAGAGGGCATGTTGTT 58.485 47.619 0.00 0.00 0.00 2.83
102 104 2.228822 GGTGTAAGAGGGCATGTTGTTG 59.771 50.000 0.00 0.00 0.00 3.33
103 105 1.885887 TGTAAGAGGGCATGTTGTTGC 59.114 47.619 0.00 0.00 42.01 4.17
104 106 2.162681 GTAAGAGGGCATGTTGTTGCT 58.837 47.619 0.00 0.00 42.38 3.91
105 107 1.251251 AAGAGGGCATGTTGTTGCTC 58.749 50.000 0.00 0.00 43.74 4.26
108 110 3.800628 GGGCATGTTGTTGCTCTTC 57.199 52.632 0.00 0.00 40.09 2.87
109 111 0.109597 GGGCATGTTGTTGCTCTTCG 60.110 55.000 0.00 0.00 40.09 3.79
150 152 7.060518 CGATTTCACTCGAGATATCAGACATTC 59.939 40.741 21.68 0.65 41.12 2.67
151 153 5.349824 TCACTCGAGATATCAGACATTCG 57.650 43.478 21.68 4.55 0.00 3.34
152 154 5.057149 TCACTCGAGATATCAGACATTCGA 58.943 41.667 21.68 8.67 35.95 3.71
153 155 5.050023 TCACTCGAGATATCAGACATTCGAC 60.050 44.000 21.68 0.00 33.98 4.20
154 156 4.816925 ACTCGAGATATCAGACATTCGACA 59.183 41.667 21.68 0.00 33.98 4.35
155 157 5.471797 ACTCGAGATATCAGACATTCGACAT 59.528 40.000 21.68 0.00 33.98 3.06
156 158 6.016693 ACTCGAGATATCAGACATTCGACATT 60.017 38.462 21.68 0.00 33.98 2.71
271 972 1.705186 AGAAGTGGCCCTAAAGCTTCA 59.295 47.619 0.00 0.00 38.30 3.02
579 1329 8.871686 AAATCTGTGAACATCTTTTGGTTAAC 57.128 30.769 0.00 0.00 0.00 2.01
580 1330 6.385649 TCTGTGAACATCTTTTGGTTAACC 57.614 37.500 18.27 18.27 28.93 2.85
586 1336 7.275999 GTGAACATCTTTTGGTTAACCGAAAAA 59.724 33.333 30.98 23.55 45.91 1.94
632 1383 7.362401 CCAGCCTTTTATCATATAGCAATGGAC 60.362 40.741 0.00 0.00 0.00 4.02
646 1447 8.862325 ATAGCAATGGACCGATCAAAAATATA 57.138 30.769 0.00 0.00 0.00 0.86
648 1449 6.545666 AGCAATGGACCGATCAAAAATATACA 59.454 34.615 0.00 0.00 0.00 2.29
652 1453 7.931578 TGGACCGATCAAAAATATACAAAGT 57.068 32.000 0.00 0.00 0.00 2.66
672 1473 1.856265 GAGCAAGAGGTTTGTGGGCG 61.856 60.000 0.00 0.00 0.00 6.13
706 1507 9.853555 GTGAATGTTATAACAACAATTCCATGA 57.146 29.630 21.57 3.53 43.03 3.07
733 1534 0.689745 AGCGTGGAATAGTAGCCCCA 60.690 55.000 0.00 0.00 0.00 4.96
734 1535 0.179468 GCGTGGAATAGTAGCCCCAA 59.821 55.000 0.00 0.00 0.00 4.12
735 1536 1.949465 CGTGGAATAGTAGCCCCAAC 58.051 55.000 0.00 0.00 0.00 3.77
736 1537 1.474498 CGTGGAATAGTAGCCCCAACC 60.474 57.143 0.00 0.00 0.00 3.77
737 1538 0.834612 TGGAATAGTAGCCCCAACCG 59.165 55.000 0.00 0.00 0.00 4.44
738 1539 0.835276 GGAATAGTAGCCCCAACCGT 59.165 55.000 0.00 0.00 0.00 4.83
787 1588 4.196193 CGAGGGCAAAATGTATAAGGACA 58.804 43.478 0.00 0.00 0.00 4.02
846 1650 6.823689 AGAATAAATACCGTCTTCAACAGCAT 59.176 34.615 0.00 0.00 0.00 3.79
852 1656 1.026718 GTCTTCAACAGCATCCCGGG 61.027 60.000 16.85 16.85 0.00 5.73
933 1747 9.715121 ACACAGATAAAATCAAAATGAAGCAAT 57.285 25.926 0.00 0.00 0.00 3.56
957 1771 3.758715 GCAACAACTTGCCCAACTT 57.241 47.368 0.00 0.00 46.27 2.66
958 1772 2.022764 GCAACAACTTGCCCAACTTT 57.977 45.000 0.00 0.00 46.27 2.66
959 1773 1.933181 GCAACAACTTGCCCAACTTTC 59.067 47.619 0.00 0.00 46.27 2.62
1041 2744 3.357079 CCACTGCCTTCCGCACAC 61.357 66.667 0.00 0.00 44.64 3.82
1042 2745 2.281070 CACTGCCTTCCGCACACT 60.281 61.111 0.00 0.00 44.64 3.55
1043 2746 2.031163 ACTGCCTTCCGCACACTC 59.969 61.111 0.00 0.00 44.64 3.51
1044 2747 2.345244 CTGCCTTCCGCACACTCT 59.655 61.111 0.00 0.00 44.64 3.24
1059 2763 4.357947 TCTCGTGGCCGTGCTCAC 62.358 66.667 0.00 0.00 35.01 3.51
1086 2790 2.202932 CCAACCAGATCGGAGCCG 60.203 66.667 1.74 1.74 38.63 5.52
1087 2791 2.892425 CAACCAGATCGGAGCCGC 60.892 66.667 3.59 0.00 39.59 6.53
1088 2792 4.514577 AACCAGATCGGAGCCGCG 62.515 66.667 0.00 0.00 39.59 6.46
1127 2831 2.047274 CGCCGGCTTCTTCTCCAA 60.047 61.111 26.68 0.00 0.00 3.53
1128 2832 1.450312 CGCCGGCTTCTTCTCCAAT 60.450 57.895 26.68 0.00 0.00 3.16
1138 2842 0.471617 CTTCTCCAATCGGCAGGGAT 59.528 55.000 0.00 0.00 0.00 3.85
1139 2843 0.469917 TTCTCCAATCGGCAGGGATC 59.530 55.000 0.00 0.00 0.00 3.36
1343 3053 1.201647 CTGACGAAGCTCCGGTAAGAA 59.798 52.381 0.00 0.00 0.00 2.52
1381 3091 4.951715 AGCTGAAATATCACTTGGCATGAA 59.048 37.500 7.45 0.00 0.00 2.57
1386 3096 7.485810 TGAAATATCACTTGGCATGAATGAAG 58.514 34.615 7.45 0.00 0.00 3.02
1390 3100 8.929260 ATATCACTTGGCATGAATGAAGATTA 57.071 30.769 7.45 0.00 0.00 1.75
1395 3105 4.217510 TGGCATGAATGAAGATTAAGGGG 58.782 43.478 0.00 0.00 0.00 4.79
1414 3124 5.805728 AGGGGACTTCAAACTATTGTAGTG 58.194 41.667 5.71 0.00 44.26 2.74
1415 3125 5.309806 AGGGGACTTCAAACTATTGTAGTGT 59.690 40.000 5.71 0.00 44.26 3.55
1416 3126 6.499350 AGGGGACTTCAAACTATTGTAGTGTA 59.501 38.462 5.71 0.00 44.26 2.90
1417 3127 6.817140 GGGGACTTCAAACTATTGTAGTGTAG 59.183 42.308 5.71 0.00 44.26 2.74
1441 3151 2.877786 CACCACAGCATAGAACACACAA 59.122 45.455 0.00 0.00 0.00 3.33
1859 3684 4.471908 ATCTCGCGCCACCATGCA 62.472 61.111 0.00 0.00 0.00 3.96
2024 3849 4.022413 GAAGTTTTACTTCCTCCTGCCT 57.978 45.455 8.09 0.00 46.68 4.75
2027 3852 3.908103 AGTTTTACTTCCTCCTGCCTACA 59.092 43.478 0.00 0.00 0.00 2.74
2213 4038 3.254166 GTGTCAGTGCAAGTGGAATGAAT 59.746 43.478 4.50 0.00 41.72 2.57
2229 4054 2.708051 TGAATGGCAAGCTGAAGAGAG 58.292 47.619 0.00 0.00 0.00 3.20
2243 4068 2.464157 AGAGAGCCAAAAAGTCTCCG 57.536 50.000 0.00 0.00 37.97 4.63
2252 4077 4.585879 CCAAAAAGTCTCCGGGAGATTTA 58.414 43.478 28.42 7.11 40.98 1.40
2272 4097 2.130193 AGACATCTATGGTGGGCACAT 58.870 47.619 0.00 0.00 0.00 3.21
2306 4131 1.867233 CCAATAGGAACAATCGGCGAG 59.133 52.381 17.22 4.99 36.89 5.03
2388 4213 9.884465 CGTCTTGTTTCTCTTCTGAAAAATATT 57.116 29.630 0.00 0.00 37.63 1.28
2453 4278 4.148563 TGTACGCGTTATTTGCATGTTT 57.851 36.364 20.78 0.00 0.00 2.83
2492 4323 9.935682 ACAAAGTAAGATAATGTTGATATTGCG 57.064 29.630 0.00 0.00 0.00 4.85
2789 5597 6.680874 AGATGCTTCAATCTGAATGTCTTC 57.319 37.500 2.07 0.00 35.59 2.87
2794 5602 5.618640 GCTTCAATCTGAATGTCTTCCACAC 60.619 44.000 0.00 0.00 38.04 3.82
2906 5909 8.660295 ATGAATTAGGAAATGGTATGATGCAT 57.340 30.769 0.00 0.00 0.00 3.96
3180 6251 2.299013 TGCGACTGTGTTATCTGACCTT 59.701 45.455 0.00 0.00 0.00 3.50
3312 6425 4.518249 ACTTAATTAGTCTTGCTCTGGCC 58.482 43.478 0.00 0.00 31.98 5.36
3450 6602 5.674008 GCAAACTGCATACTGAGAATATCG 58.326 41.667 0.00 0.00 44.26 2.92
3548 6858 3.855255 TGATGTGGAAGGTTTCAGTGA 57.145 42.857 0.00 0.00 0.00 3.41
3638 6952 4.348495 TCCACCCCCACCCTCCTC 62.348 72.222 0.00 0.00 0.00 3.71
3710 7024 1.274703 TTCCTCCTCATGCAGTCCCC 61.275 60.000 0.00 0.00 0.00 4.81
3752 7068 4.021631 CAGTGGCGCTGTGCTGTG 62.022 66.667 19.69 4.56 45.43 3.66
3759 7075 3.720193 GCTGTGCTGTGCGTGGAG 61.720 66.667 0.00 0.00 0.00 3.86
3837 7163 2.358737 GTCCGTGGTGGCCAGAAG 60.359 66.667 5.11 0.00 37.80 2.85
3841 7167 2.515901 GTGGTGGCCAGAAGTGGT 59.484 61.111 5.11 0.00 46.96 4.16
3854 7180 3.263941 GTGGTGCCACGGTCATTC 58.736 61.111 5.53 0.00 37.19 2.67
3855 7181 2.358125 TGGTGCCACGGTCATTCG 60.358 61.111 0.00 0.00 0.00 3.34
3856 7182 3.124921 GGTGCCACGGTCATTCGG 61.125 66.667 0.00 0.00 0.00 4.30
3861 7187 2.511600 CACGGTCATTCGGGAGGC 60.512 66.667 0.00 0.00 35.20 4.70
3862 7188 3.000819 ACGGTCATTCGGGAGGCA 61.001 61.111 0.00 0.00 0.00 4.75
3863 7189 2.511600 CGGTCATTCGGGAGGCAC 60.512 66.667 0.00 0.00 0.00 5.01
4037 7367 3.083997 GATCTGGCCCGTGGAGGT 61.084 66.667 0.00 0.00 38.74 3.85
4183 7516 1.708993 GGGATCTGGCACCCATAGCA 61.709 60.000 6.78 0.00 44.96 3.49
4231 7564 3.177884 TGTTGGCTGGCCCTGACT 61.178 61.111 9.28 0.00 34.56 3.41
4272 7605 1.665442 GTTCCGCCCTTGCATTGTT 59.335 52.632 0.00 0.00 37.32 2.83
4371 7704 1.492176 CCCTGGATGTTGAGGCTACAT 59.508 52.381 2.58 2.58 38.86 2.29
4646 7987 1.199327 CTACGAGTGTCGCTTCCTTCA 59.801 52.381 0.00 0.00 45.12 3.02
4697 8038 1.074951 AAGGGCTCCGGGTGAAAAG 59.925 57.895 0.00 0.00 0.00 2.27
4698 8039 1.716028 AAGGGCTCCGGGTGAAAAGT 61.716 55.000 0.00 0.00 0.00 2.66
4699 8040 1.971695 GGGCTCCGGGTGAAAAGTG 60.972 63.158 0.00 0.00 0.00 3.16
4700 8041 1.072505 GGCTCCGGGTGAAAAGTGA 59.927 57.895 0.00 0.00 0.00 3.41
4701 8042 0.536460 GGCTCCGGGTGAAAAGTGAA 60.536 55.000 0.00 0.00 0.00 3.18
4702 8043 1.314730 GCTCCGGGTGAAAAGTGAAA 58.685 50.000 0.00 0.00 0.00 2.69
4703 8044 1.679153 GCTCCGGGTGAAAAGTGAAAA 59.321 47.619 0.00 0.00 0.00 2.29
4730 8071 1.004918 CGTCCTTTTGGGCTCGACT 60.005 57.895 0.00 0.00 43.43 4.18
4731 8072 1.014564 CGTCCTTTTGGGCTCGACTC 61.015 60.000 0.00 0.00 43.43 3.36
4849 8890 2.166664 GGACTTGTAGCATCCTCGACTT 59.833 50.000 0.00 0.00 0.00 3.01
4906 8947 3.014623 CAGTGTCTCCGTGGTATCTGTA 58.985 50.000 0.00 0.00 0.00 2.74
4972 9013 3.739519 CGGAACAAGGAGGCTATCTCAAG 60.740 52.174 0.00 0.00 44.19 3.02
5054 9527 4.442192 CCAGTCCTATTCAGTAGTCTTGGC 60.442 50.000 0.00 0.00 0.00 4.52
5060 9533 4.899352 ATTCAGTAGTCTTGGCTGTCTT 57.101 40.909 0.00 0.00 0.00 3.01
5066 9539 4.816925 AGTAGTCTTGGCTGTCTTTTGTTC 59.183 41.667 0.00 0.00 0.00 3.18
5180 9654 2.781681 ATGAGGGTTTCCTTACCACG 57.218 50.000 0.00 0.00 45.05 4.94
5203 9677 0.885196 TATCGGTTTGGCTGTTTGGC 59.115 50.000 0.00 0.00 42.18 4.52
5254 9734 4.157289 TGTTTCGAGAGAGGTGTATGTACC 59.843 45.833 0.00 0.00 43.69 3.34
5433 9935 2.419673 TGACTCGCTACGGACGATTTTA 59.580 45.455 0.00 0.00 39.12 1.52
5581 10959 6.818142 CCTATTCTGTATCATGTCACAACACA 59.182 38.462 0.00 0.00 38.48 3.72
5587 10965 9.230122 TCTGTATCATGTCACAACACAATTATT 57.770 29.630 0.00 0.00 38.48 1.40
5974 11377 1.139095 GGCGATCTCGGAGTTCGTT 59.861 57.895 28.88 4.26 39.07 3.85
6197 11604 6.375736 TGTTGAGAATGTTGTGTGGAAACTTA 59.624 34.615 0.00 0.00 0.00 2.24
6264 11687 7.268586 ACTACAGAACTTAGCATGTCCTTATG 58.731 38.462 0.00 0.00 0.00 1.90
6268 11691 2.146342 CTTAGCATGTCCTTATGGCCG 58.854 52.381 0.00 0.00 0.00 6.13
6384 11807 4.100189 GGTGCACTGTATCCTGAGTAATCT 59.900 45.833 17.98 0.00 0.00 2.40
6385 11808 5.395768 GGTGCACTGTATCCTGAGTAATCTT 60.396 44.000 17.98 0.00 0.00 2.40
6386 11809 6.109359 GTGCACTGTATCCTGAGTAATCTTT 58.891 40.000 10.32 0.00 0.00 2.52
6420 11843 6.859715 GCAACAAGCTTATATTGTCAAGTG 57.140 37.500 15.05 1.43 39.91 3.16
6458 11881 3.861276 ACAGTCATGTTGGATGCAATG 57.139 42.857 1.94 0.00 35.63 2.82
6483 11914 5.982890 ACATGAATAAAACAGAACCCAGG 57.017 39.130 0.00 0.00 0.00 4.45
6535 11966 9.787532 TTGAATTTGTTAATACTAGCAAGATGC 57.212 29.630 0.00 0.00 45.46 3.91
6536 11967 8.405531 TGAATTTGTTAATACTAGCAAGATGCC 58.594 33.333 0.00 0.00 46.52 4.40
6538 11969 4.377021 TGTTAATACTAGCAAGATGCCCG 58.623 43.478 0.00 0.00 46.52 6.13
6540 11971 2.533266 ATACTAGCAAGATGCCCGTG 57.467 50.000 0.00 0.00 46.52 4.94
6557 11988 2.638744 TGCATTGCACGGAACATCA 58.361 47.368 7.38 0.00 31.71 3.07
6558 11989 0.957362 TGCATTGCACGGAACATCAA 59.043 45.000 7.38 0.00 31.71 2.57
6559 11990 1.068402 TGCATTGCACGGAACATCAAG 60.068 47.619 7.38 0.00 31.71 3.02
6560 11991 1.199789 GCATTGCACGGAACATCAAGA 59.800 47.619 3.15 0.00 0.00 3.02
6561 11992 2.159338 GCATTGCACGGAACATCAAGAT 60.159 45.455 3.15 0.00 0.00 2.40
6562 11993 3.431856 CATTGCACGGAACATCAAGATG 58.568 45.455 8.45 8.45 44.15 2.90
6563 11994 0.804364 TGCACGGAACATCAAGATGC 59.196 50.000 9.85 0.00 42.39 3.91
6564 11995 0.804364 GCACGGAACATCAAGATGCA 59.196 50.000 9.85 0.00 42.39 3.96
6565 11996 1.402968 GCACGGAACATCAAGATGCAT 59.597 47.619 9.85 0.00 42.39 3.96
6566 11997 2.159338 GCACGGAACATCAAGATGCATT 60.159 45.455 9.85 0.00 42.39 3.56
6567 11998 3.674138 GCACGGAACATCAAGATGCATTT 60.674 43.478 9.85 0.00 42.39 2.32
6568 11999 4.487948 CACGGAACATCAAGATGCATTTT 58.512 39.130 9.85 0.00 42.39 1.82
6569 12000 4.925054 CACGGAACATCAAGATGCATTTTT 59.075 37.500 9.85 0.00 42.39 1.94
6598 12029 2.978156 ACCTGTTGTGATTGACCCAT 57.022 45.000 0.00 0.00 0.00 4.00
6599 12030 2.517959 ACCTGTTGTGATTGACCCATG 58.482 47.619 0.00 0.00 0.00 3.66
6600 12031 1.203052 CCTGTTGTGATTGACCCATGC 59.797 52.381 0.00 0.00 0.00 4.06
6601 12032 0.880441 TGTTGTGATTGACCCATGCG 59.120 50.000 0.00 0.00 0.00 4.73
6602 12033 0.171007 GTTGTGATTGACCCATGCGG 59.829 55.000 0.00 0.00 37.81 5.69
6612 12043 4.800554 CCATGCGGGAGTAATCCC 57.199 61.111 18.69 18.69 46.43 3.85
6627 12058 8.570068 GGAGTAATCCCATGTGTAAAAACTAA 57.430 34.615 0.00 0.00 0.00 2.24
6628 12059 9.185680 GGAGTAATCCCATGTGTAAAAACTAAT 57.814 33.333 0.00 0.00 0.00 1.73
6630 12061 9.747898 AGTAATCCCATGTGTAAAAACTAATGA 57.252 29.630 0.00 0.00 0.00 2.57
6646 12077 8.879342 AAACTAATGATATCTCGAGAAACAGG 57.121 34.615 20.91 14.37 0.00 4.00
6647 12078 7.825331 ACTAATGATATCTCGAGAAACAGGA 57.175 36.000 20.91 10.23 0.00 3.86
6648 12079 7.881142 ACTAATGATATCTCGAGAAACAGGAG 58.119 38.462 20.91 18.99 0.00 3.69
6649 12080 6.968263 AATGATATCTCGAGAAACAGGAGA 57.032 37.500 20.91 0.00 40.75 3.71
6650 12081 6.573664 ATGATATCTCGAGAAACAGGAGAG 57.426 41.667 20.91 0.00 39.91 3.20
6651 12082 5.685728 TGATATCTCGAGAAACAGGAGAGA 58.314 41.667 20.91 0.00 39.91 3.10
6652 12083 6.303054 TGATATCTCGAGAAACAGGAGAGAT 58.697 40.000 20.91 10.51 46.55 2.75
6655 12086 6.633500 ATCTCGAGAAACAGGAGAGATAAG 57.367 41.667 20.91 0.00 44.12 1.73
6656 12087 4.884744 TCTCGAGAAACAGGAGAGATAAGG 59.115 45.833 14.01 0.00 33.58 2.69
6657 12088 4.601084 TCGAGAAACAGGAGAGATAAGGT 58.399 43.478 0.00 0.00 0.00 3.50
6658 12089 4.399618 TCGAGAAACAGGAGAGATAAGGTG 59.600 45.833 0.00 0.00 0.00 4.00
6659 12090 4.399618 CGAGAAACAGGAGAGATAAGGTGA 59.600 45.833 0.00 0.00 0.00 4.02
6660 12091 5.449862 CGAGAAACAGGAGAGATAAGGTGAG 60.450 48.000 0.00 0.00 0.00 3.51
6661 12092 4.714308 AGAAACAGGAGAGATAAGGTGAGG 59.286 45.833 0.00 0.00 0.00 3.86
6662 12093 4.338795 AACAGGAGAGATAAGGTGAGGA 57.661 45.455 0.00 0.00 0.00 3.71
6663 12094 3.909732 ACAGGAGAGATAAGGTGAGGAG 58.090 50.000 0.00 0.00 0.00 3.69
6664 12095 3.230134 CAGGAGAGATAAGGTGAGGAGG 58.770 54.545 0.00 0.00 0.00 4.30
6665 12096 3.117322 CAGGAGAGATAAGGTGAGGAGGA 60.117 52.174 0.00 0.00 0.00 3.71
6666 12097 3.140144 AGGAGAGATAAGGTGAGGAGGAG 59.860 52.174 0.00 0.00 0.00 3.69
6667 12098 3.117284 GGAGAGATAAGGTGAGGAGGAGT 60.117 52.174 0.00 0.00 0.00 3.85
6668 12099 3.888930 GAGAGATAAGGTGAGGAGGAGTG 59.111 52.174 0.00 0.00 0.00 3.51
6669 12100 2.962421 GAGATAAGGTGAGGAGGAGTGG 59.038 54.545 0.00 0.00 0.00 4.00
6670 12101 2.043227 GATAAGGTGAGGAGGAGTGGG 58.957 57.143 0.00 0.00 0.00 4.61
6671 12102 0.042731 TAAGGTGAGGAGGAGTGGGG 59.957 60.000 0.00 0.00 0.00 4.96
6672 12103 3.403558 GGTGAGGAGGAGTGGGGC 61.404 72.222 0.00 0.00 0.00 5.80
6673 12104 3.775654 GTGAGGAGGAGTGGGGCG 61.776 72.222 0.00 0.00 0.00 6.13
6674 12105 4.316823 TGAGGAGGAGTGGGGCGT 62.317 66.667 0.00 0.00 0.00 5.68
6675 12106 3.775654 GAGGAGGAGTGGGGCGTG 61.776 72.222 0.00 0.00 0.00 5.34
6678 12109 4.394712 GAGGAGTGGGGCGTGGTG 62.395 72.222 0.00 0.00 0.00 4.17
6683 12114 4.344865 GTGGGGCGTGGTGGTGAT 62.345 66.667 0.00 0.00 0.00 3.06
6684 12115 3.575247 TGGGGCGTGGTGGTGATT 61.575 61.111 0.00 0.00 0.00 2.57
6685 12116 3.061848 GGGGCGTGGTGGTGATTG 61.062 66.667 0.00 0.00 0.00 2.67
6686 12117 2.033448 GGGCGTGGTGGTGATTGA 59.967 61.111 0.00 0.00 0.00 2.57
6687 12118 1.378514 GGGCGTGGTGGTGATTGAT 60.379 57.895 0.00 0.00 0.00 2.57
6688 12119 1.656818 GGGCGTGGTGGTGATTGATG 61.657 60.000 0.00 0.00 0.00 3.07
6689 12120 1.656818 GGCGTGGTGGTGATTGATGG 61.657 60.000 0.00 0.00 0.00 3.51
6690 12121 0.960364 GCGTGGTGGTGATTGATGGT 60.960 55.000 0.00 0.00 0.00 3.55
6691 12122 1.086696 CGTGGTGGTGATTGATGGTC 58.913 55.000 0.00 0.00 0.00 4.02
6692 12123 1.086696 GTGGTGGTGATTGATGGTCG 58.913 55.000 0.00 0.00 0.00 4.79
6693 12124 0.035534 TGGTGGTGATTGATGGTCGG 60.036 55.000 0.00 0.00 0.00 4.79
6694 12125 0.251916 GGTGGTGATTGATGGTCGGA 59.748 55.000 0.00 0.00 0.00 4.55
6695 12126 1.369625 GTGGTGATTGATGGTCGGAC 58.630 55.000 0.00 0.00 0.00 4.79
6696 12127 1.066143 GTGGTGATTGATGGTCGGACT 60.066 52.381 8.23 0.00 0.00 3.85
6697 12128 1.066215 TGGTGATTGATGGTCGGACTG 60.066 52.381 8.23 0.00 0.00 3.51
6698 12129 1.207089 GGTGATTGATGGTCGGACTGA 59.793 52.381 8.23 0.00 0.00 3.41
6699 12130 2.544685 GTGATTGATGGTCGGACTGAG 58.455 52.381 8.23 0.00 0.00 3.35
6700 12131 1.134699 TGATTGATGGTCGGACTGAGC 60.135 52.381 8.23 6.53 45.46 4.26
6705 12136 3.827898 GGTCGGACTGAGCGGAGG 61.828 72.222 8.23 0.00 35.01 4.30
6706 12137 4.500116 GTCGGACTGAGCGGAGGC 62.500 72.222 0.00 0.00 40.37 4.70
6708 12139 3.842923 CGGACTGAGCGGAGGCAT 61.843 66.667 0.00 0.00 43.41 4.40
6709 12140 2.202987 GGACTGAGCGGAGGCATG 60.203 66.667 0.00 0.00 43.41 4.06
6710 12141 2.202987 GACTGAGCGGAGGCATGG 60.203 66.667 0.00 0.00 43.41 3.66
6711 12142 3.746949 GACTGAGCGGAGGCATGGG 62.747 68.421 0.00 0.00 43.41 4.00
6712 12143 4.559063 CTGAGCGGAGGCATGGGG 62.559 72.222 0.00 0.00 43.41 4.96
6714 12145 3.564218 GAGCGGAGGCATGGGGAT 61.564 66.667 0.00 0.00 43.41 3.85
6715 12146 3.839353 GAGCGGAGGCATGGGGATG 62.839 68.421 0.00 0.00 43.41 3.51
6716 12147 4.962836 GCGGAGGCATGGGGATGG 62.963 72.222 0.00 0.00 39.62 3.51
6717 12148 3.170672 CGGAGGCATGGGGATGGA 61.171 66.667 0.00 0.00 0.00 3.41
6718 12149 2.517919 GGAGGCATGGGGATGGAC 59.482 66.667 0.00 0.00 0.00 4.02
6719 12150 2.111878 GAGGCATGGGGATGGACG 59.888 66.667 0.00 0.00 0.00 4.79
6720 12151 2.366837 AGGCATGGGGATGGACGA 60.367 61.111 0.00 0.00 0.00 4.20
6721 12152 2.203209 GGCATGGGGATGGACGAC 60.203 66.667 0.00 0.00 0.00 4.34
6722 12153 2.588877 GCATGGGGATGGACGACG 60.589 66.667 0.00 0.00 0.00 5.12
6723 12154 2.588877 CATGGGGATGGACGACGC 60.589 66.667 0.00 0.00 0.00 5.19
6724 12155 3.861797 ATGGGGATGGACGACGCC 61.862 66.667 0.00 0.00 39.15 5.68
6727 12158 3.912907 GGGATGGACGACGCCGAT 61.913 66.667 0.00 0.00 39.50 4.18
6728 12159 2.558286 GGGATGGACGACGCCGATA 61.558 63.158 0.00 0.00 39.50 2.92
6729 12160 1.081376 GGATGGACGACGCCGATAG 60.081 63.158 0.00 0.00 39.50 2.08
6730 12161 1.653115 GATGGACGACGCCGATAGT 59.347 57.895 0.00 0.00 39.50 2.12
6731 12162 0.660595 GATGGACGACGCCGATAGTG 60.661 60.000 0.00 0.00 39.50 2.74
6732 12163 2.025727 GGACGACGCCGATAGTGG 59.974 66.667 0.00 0.00 39.50 4.00
6740 12171 4.462394 CCGATAGTGGCCACCATG 57.538 61.111 32.29 18.79 35.28 3.66
6741 12172 1.893808 CCGATAGTGGCCACCATGC 60.894 63.158 32.29 17.62 35.28 4.06
6742 12173 1.146930 CGATAGTGGCCACCATGCT 59.853 57.895 32.29 16.04 35.28 3.79
6743 12174 0.392706 CGATAGTGGCCACCATGCTA 59.607 55.000 32.29 17.81 35.28 3.49
6744 12175 1.606480 CGATAGTGGCCACCATGCTAG 60.606 57.143 32.29 13.39 35.28 3.42
6745 12176 1.694150 GATAGTGGCCACCATGCTAGA 59.306 52.381 32.29 7.94 35.28 2.43
6746 12177 1.806496 TAGTGGCCACCATGCTAGAT 58.194 50.000 32.29 12.93 35.28 1.98
6747 12178 0.921896 AGTGGCCACCATGCTAGATT 59.078 50.000 32.29 6.70 35.28 2.40
6748 12179 1.027357 GTGGCCACCATGCTAGATTG 58.973 55.000 26.31 0.00 35.28 2.67
6749 12180 0.625316 TGGCCACCATGCTAGATTGT 59.375 50.000 0.00 0.00 0.00 2.71
6750 12181 1.005805 TGGCCACCATGCTAGATTGTT 59.994 47.619 0.00 0.00 0.00 2.83
6751 12182 1.678101 GGCCACCATGCTAGATTGTTC 59.322 52.381 0.00 0.00 0.00 3.18
6752 12183 2.648059 GCCACCATGCTAGATTGTTCT 58.352 47.619 0.00 0.00 35.90 3.01
6753 12184 3.433598 GGCCACCATGCTAGATTGTTCTA 60.434 47.826 0.00 0.00 33.17 2.10
6801 12232 4.202441 CAATGAGGTTGTGGGAGATAAGG 58.798 47.826 0.00 0.00 33.01 2.69
6802 12233 3.199442 TGAGGTTGTGGGAGATAAGGA 57.801 47.619 0.00 0.00 0.00 3.36
6803 12234 3.736094 TGAGGTTGTGGGAGATAAGGAT 58.264 45.455 0.00 0.00 0.00 3.24
6804 12235 3.455910 TGAGGTTGTGGGAGATAAGGATG 59.544 47.826 0.00 0.00 0.00 3.51
6805 12236 3.711704 GAGGTTGTGGGAGATAAGGATGA 59.288 47.826 0.00 0.00 0.00 2.92
6806 12237 4.111577 AGGTTGTGGGAGATAAGGATGAA 58.888 43.478 0.00 0.00 0.00 2.57
6807 12238 4.080299 AGGTTGTGGGAGATAAGGATGAAC 60.080 45.833 0.00 0.00 0.00 3.18
6808 12239 3.819564 TGTGGGAGATAAGGATGAACG 57.180 47.619 0.00 0.00 0.00 3.95
6809 12240 3.371034 TGTGGGAGATAAGGATGAACGA 58.629 45.455 0.00 0.00 0.00 3.85
6810 12241 3.384789 TGTGGGAGATAAGGATGAACGAG 59.615 47.826 0.00 0.00 0.00 4.18
6811 12242 2.965831 TGGGAGATAAGGATGAACGAGG 59.034 50.000 0.00 0.00 0.00 4.63
6812 12243 2.300437 GGGAGATAAGGATGAACGAGGG 59.700 54.545 0.00 0.00 0.00 4.30
6813 12244 3.231818 GGAGATAAGGATGAACGAGGGA 58.768 50.000 0.00 0.00 0.00 4.20
6814 12245 3.641906 GGAGATAAGGATGAACGAGGGAA 59.358 47.826 0.00 0.00 0.00 3.97
6815 12246 4.262249 GGAGATAAGGATGAACGAGGGAAG 60.262 50.000 0.00 0.00 0.00 3.46
6816 12247 3.643792 AGATAAGGATGAACGAGGGAAGG 59.356 47.826 0.00 0.00 0.00 3.46
6817 12248 0.912486 AAGGATGAACGAGGGAAGGG 59.088 55.000 0.00 0.00 0.00 3.95
6818 12249 1.153147 GGATGAACGAGGGAAGGGC 60.153 63.158 0.00 0.00 0.00 5.19
6819 12250 1.627297 GGATGAACGAGGGAAGGGCT 61.627 60.000 0.00 0.00 0.00 5.19
6820 12251 0.253327 GATGAACGAGGGAAGGGCTT 59.747 55.000 0.00 0.00 0.00 4.35
6821 12252 1.485066 GATGAACGAGGGAAGGGCTTA 59.515 52.381 0.00 0.00 0.00 3.09
6822 12253 1.580059 TGAACGAGGGAAGGGCTTAT 58.420 50.000 0.00 0.00 0.00 1.73
6823 12254 1.485066 TGAACGAGGGAAGGGCTTATC 59.515 52.381 0.00 0.00 0.00 1.75
6824 12255 1.763545 GAACGAGGGAAGGGCTTATCT 59.236 52.381 0.00 0.00 0.00 1.98
6825 12256 1.123928 ACGAGGGAAGGGCTTATCTG 58.876 55.000 0.00 0.00 0.00 2.90
6826 12257 0.250081 CGAGGGAAGGGCTTATCTGC 60.250 60.000 0.00 0.00 0.00 4.26
6827 12258 0.839946 GAGGGAAGGGCTTATCTGCA 59.160 55.000 0.00 0.00 34.04 4.41
6828 12259 1.212935 GAGGGAAGGGCTTATCTGCAA 59.787 52.381 0.00 0.00 34.04 4.08
6829 12260 1.640670 AGGGAAGGGCTTATCTGCAAA 59.359 47.619 0.00 0.00 34.04 3.68
6830 12261 2.245806 AGGGAAGGGCTTATCTGCAAAT 59.754 45.455 0.00 0.00 34.04 2.32
6831 12262 2.363359 GGGAAGGGCTTATCTGCAAATG 59.637 50.000 0.00 0.00 34.04 2.32
6832 12263 3.026694 GGAAGGGCTTATCTGCAAATGT 58.973 45.455 0.00 0.00 34.04 2.71
6833 12264 3.181483 GGAAGGGCTTATCTGCAAATGTG 60.181 47.826 0.00 0.00 34.04 3.21
6834 12265 2.381911 AGGGCTTATCTGCAAATGTGG 58.618 47.619 0.00 0.00 34.04 4.17
6835 12266 2.025037 AGGGCTTATCTGCAAATGTGGA 60.025 45.455 0.00 0.00 34.04 4.02
6836 12267 2.360165 GGGCTTATCTGCAAATGTGGAG 59.640 50.000 0.00 0.00 44.23 3.86
6841 12272 2.775911 TCTGCAAATGTGGAGAGAGG 57.224 50.000 2.39 0.00 46.25 3.69
6842 12273 1.980765 TCTGCAAATGTGGAGAGAGGT 59.019 47.619 2.39 0.00 46.25 3.85
6843 12274 2.082231 CTGCAAATGTGGAGAGAGGTG 58.918 52.381 0.00 0.00 45.65 4.00
6844 12275 0.807496 GCAAATGTGGAGAGAGGTGC 59.193 55.000 0.00 0.00 0.00 5.01
6845 12276 1.081892 CAAATGTGGAGAGAGGTGCG 58.918 55.000 0.00 0.00 0.00 5.34
6846 12277 0.036010 AAATGTGGAGAGAGGTGCGG 60.036 55.000 0.00 0.00 0.00 5.69
6847 12278 1.903877 AATGTGGAGAGAGGTGCGGG 61.904 60.000 0.00 0.00 0.00 6.13
6848 12279 2.997897 GTGGAGAGAGGTGCGGGT 60.998 66.667 0.00 0.00 0.00 5.28
6849 12280 1.681327 GTGGAGAGAGGTGCGGGTA 60.681 63.158 0.00 0.00 0.00 3.69
6850 12281 1.043673 GTGGAGAGAGGTGCGGGTAT 61.044 60.000 0.00 0.00 0.00 2.73
6851 12282 0.755698 TGGAGAGAGGTGCGGGTATC 60.756 60.000 0.00 0.00 0.00 2.24
6852 12283 0.468400 GGAGAGAGGTGCGGGTATCT 60.468 60.000 0.00 0.00 0.00 1.98
6853 12284 1.404843 GAGAGAGGTGCGGGTATCTT 58.595 55.000 0.00 0.00 0.00 2.40
6854 12285 1.757699 GAGAGAGGTGCGGGTATCTTT 59.242 52.381 0.00 0.00 0.00 2.52
6855 12286 2.168728 GAGAGAGGTGCGGGTATCTTTT 59.831 50.000 0.00 0.00 0.00 2.27
6856 12287 2.572104 AGAGAGGTGCGGGTATCTTTTT 59.428 45.455 0.00 0.00 0.00 1.94
6857 12288 2.678336 GAGAGGTGCGGGTATCTTTTTG 59.322 50.000 0.00 0.00 0.00 2.44
6858 12289 1.132453 GAGGTGCGGGTATCTTTTTGC 59.868 52.381 0.00 0.00 0.00 3.68
6859 12290 0.885196 GGTGCGGGTATCTTTTTGCA 59.115 50.000 0.00 0.00 0.00 4.08
6860 12291 1.271102 GGTGCGGGTATCTTTTTGCAA 59.729 47.619 0.00 0.00 33.67 4.08
6861 12292 2.288518 GGTGCGGGTATCTTTTTGCAAA 60.289 45.455 8.05 8.05 33.67 3.68
6862 12293 3.385577 GTGCGGGTATCTTTTTGCAAAA 58.614 40.909 20.46 20.46 33.67 2.44
6863 12294 3.993736 GTGCGGGTATCTTTTTGCAAAAT 59.006 39.130 24.39 12.94 33.67 1.82
6864 12295 4.450757 GTGCGGGTATCTTTTTGCAAAATT 59.549 37.500 24.39 14.72 33.67 1.82
6865 12296 4.450419 TGCGGGTATCTTTTTGCAAAATTG 59.550 37.500 24.39 19.07 0.00 2.32
6879 12310 4.471157 CAAAATTGCCATCGTTTGCTTT 57.529 36.364 0.00 0.00 0.00 3.51
6880 12311 4.456914 CAAAATTGCCATCGTTTGCTTTC 58.543 39.130 0.00 0.00 0.00 2.62
6881 12312 3.665745 AATTGCCATCGTTTGCTTTCT 57.334 38.095 0.00 0.00 0.00 2.52
6882 12313 4.782019 AATTGCCATCGTTTGCTTTCTA 57.218 36.364 0.00 0.00 0.00 2.10
6883 12314 4.989279 ATTGCCATCGTTTGCTTTCTAT 57.011 36.364 0.00 0.00 0.00 1.98
6884 12315 4.355543 TTGCCATCGTTTGCTTTCTATC 57.644 40.909 0.00 0.00 0.00 2.08
6885 12316 2.682856 TGCCATCGTTTGCTTTCTATCC 59.317 45.455 0.00 0.00 0.00 2.59
6886 12317 2.286418 GCCATCGTTTGCTTTCTATCCG 60.286 50.000 0.00 0.00 0.00 4.18
6887 12318 2.936498 CCATCGTTTGCTTTCTATCCGT 59.064 45.455 0.00 0.00 0.00 4.69
6888 12319 3.001330 CCATCGTTTGCTTTCTATCCGTC 59.999 47.826 0.00 0.00 0.00 4.79
6889 12320 3.306917 TCGTTTGCTTTCTATCCGTCA 57.693 42.857 0.00 0.00 0.00 4.35
6890 12321 3.250744 TCGTTTGCTTTCTATCCGTCAG 58.749 45.455 0.00 0.00 0.00 3.51
6891 12322 3.057104 TCGTTTGCTTTCTATCCGTCAGA 60.057 43.478 0.00 0.00 0.00 3.27
6892 12323 3.865745 CGTTTGCTTTCTATCCGTCAGAT 59.134 43.478 0.00 0.00 39.15 2.90
6893 12324 5.041287 CGTTTGCTTTCTATCCGTCAGATA 58.959 41.667 0.00 0.00 36.33 1.98
6894 12325 5.692204 CGTTTGCTTTCTATCCGTCAGATAT 59.308 40.000 0.00 0.00 36.84 1.63
6895 12326 6.861572 CGTTTGCTTTCTATCCGTCAGATATA 59.138 38.462 0.00 0.00 36.84 0.86
6896 12327 7.061210 CGTTTGCTTTCTATCCGTCAGATATAG 59.939 40.741 0.00 0.00 36.84 1.31
6897 12328 7.761038 TTGCTTTCTATCCGTCAGATATAGA 57.239 36.000 0.00 0.00 36.84 1.98
6898 12329 7.946381 TGCTTTCTATCCGTCAGATATAGAT 57.054 36.000 0.00 0.00 36.84 1.98
6899 12330 7.990917 TGCTTTCTATCCGTCAGATATAGATC 58.009 38.462 0.00 0.00 36.84 2.75
6900 12331 7.831690 TGCTTTCTATCCGTCAGATATAGATCT 59.168 37.037 0.00 0.00 43.63 2.75
6915 12346 9.062524 AGATATAGATCTGACGGTCTATATTGC 57.937 37.037 15.37 8.09 44.58 3.56
6916 12347 8.753497 ATATAGATCTGACGGTCTATATTGCA 57.247 34.615 5.18 0.00 43.21 4.08
6917 12348 5.791336 AGATCTGACGGTCTATATTGCAA 57.209 39.130 9.88 0.00 0.00 4.08
6918 12349 5.777802 AGATCTGACGGTCTATATTGCAAG 58.222 41.667 4.94 0.00 0.00 4.01
6919 12350 5.536538 AGATCTGACGGTCTATATTGCAAGA 59.463 40.000 4.94 0.00 0.00 3.02
6920 12351 5.791336 TCTGACGGTCTATATTGCAAGAT 57.209 39.130 11.88 11.88 0.00 2.40
6921 12352 5.532557 TCTGACGGTCTATATTGCAAGATG 58.467 41.667 16.68 6.94 0.00 2.90
6922 12353 4.631131 TGACGGTCTATATTGCAAGATGG 58.369 43.478 16.68 13.71 0.00 3.51
6923 12354 3.403038 ACGGTCTATATTGCAAGATGGC 58.597 45.455 16.68 9.50 0.00 4.40
6924 12355 3.181455 ACGGTCTATATTGCAAGATGGCA 60.181 43.478 16.68 1.69 43.19 4.92
6925 12356 3.434641 CGGTCTATATTGCAAGATGGCAG 59.565 47.826 16.68 6.42 45.88 4.85
6926 12357 4.645535 GGTCTATATTGCAAGATGGCAGA 58.354 43.478 16.68 8.69 45.88 4.26
6927 12358 4.453819 GGTCTATATTGCAAGATGGCAGAC 59.546 45.833 20.05 20.05 45.88 3.51
6928 12359 5.059161 GTCTATATTGCAAGATGGCAGACA 58.941 41.667 21.99 2.22 45.88 3.41
6929 12360 5.049818 GTCTATATTGCAAGATGGCAGACAC 60.050 44.000 21.99 9.45 45.88 3.67
6930 12361 1.913778 ATTGCAAGATGGCAGACACA 58.086 45.000 4.94 0.00 45.88 3.72
6931 12362 0.953727 TTGCAAGATGGCAGACACAC 59.046 50.000 0.00 0.00 45.88 3.82
6932 12363 0.179023 TGCAAGATGGCAGACACACA 60.179 50.000 0.00 0.00 39.25 3.72
6933 12364 0.953727 GCAAGATGGCAGACACACAA 59.046 50.000 0.00 0.00 0.00 3.33
6934 12365 1.542915 GCAAGATGGCAGACACACAAT 59.457 47.619 0.00 0.00 0.00 2.71
6935 12366 2.415090 GCAAGATGGCAGACACACAATC 60.415 50.000 0.00 0.00 0.00 2.67
6936 12367 2.815503 CAAGATGGCAGACACACAATCA 59.184 45.455 0.00 0.00 0.00 2.57
6937 12368 3.361281 AGATGGCAGACACACAATCAT 57.639 42.857 0.00 0.00 0.00 2.45
6938 12369 3.276857 AGATGGCAGACACACAATCATC 58.723 45.455 0.00 0.00 0.00 2.92
6939 12370 2.565046 TGGCAGACACACAATCATCA 57.435 45.000 0.00 0.00 0.00 3.07
6940 12371 2.153645 TGGCAGACACACAATCATCAC 58.846 47.619 0.00 0.00 0.00 3.06
6941 12372 1.470098 GGCAGACACACAATCATCACC 59.530 52.381 0.00 0.00 0.00 4.02
6942 12373 2.153645 GCAGACACACAATCATCACCA 58.846 47.619 0.00 0.00 0.00 4.17
6943 12374 2.553602 GCAGACACACAATCATCACCAA 59.446 45.455 0.00 0.00 0.00 3.67
6944 12375 3.610114 GCAGACACACAATCATCACCAAC 60.610 47.826 0.00 0.00 0.00 3.77
6945 12376 3.817084 CAGACACACAATCATCACCAACT 59.183 43.478 0.00 0.00 0.00 3.16
6946 12377 4.067896 AGACACACAATCATCACCAACTC 58.932 43.478 0.00 0.00 0.00 3.01
6947 12378 2.807967 ACACACAATCATCACCAACTCG 59.192 45.455 0.00 0.00 0.00 4.18
6948 12379 2.160219 CACACAATCATCACCAACTCGG 59.840 50.000 0.00 0.00 42.50 4.63
7210 14028 3.572255 GTGTAGGAAACCCTGAATTTGCA 59.428 43.478 0.00 0.00 35.26 4.08
7240 14058 1.153208 CTCCACTGCCTCTGGATGC 60.153 63.158 0.00 0.00 37.18 3.91
7352 14171 5.338589 AACAATCTGTTCTACTGCCAGCAG 61.339 45.833 17.88 17.88 42.23 4.24
7360 14179 2.093816 TCTACTGCCAGCAGAATGTCAG 60.094 50.000 25.66 11.67 46.30 3.51
7364 14183 1.072806 TGCCAGCAGAATGTCAGTCTT 59.927 47.619 0.00 0.00 39.31 3.01
7386 14212 0.530650 ACCTCTACGCGGAATGCATG 60.531 55.000 12.47 0.00 46.97 4.06
7435 14855 6.040278 TCAAAGATGTACAAATTCTGTTGGCA 59.960 34.615 0.00 0.00 39.64 4.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
100 102 2.221169 AGCAACAACATCGAAGAGCAA 58.779 42.857 0.00 0.00 43.63 3.91
101 103 1.800586 GAGCAACAACATCGAAGAGCA 59.199 47.619 0.00 0.00 43.63 4.26
102 104 2.072298 AGAGCAACAACATCGAAGAGC 58.928 47.619 0.00 0.00 43.63 4.09
103 105 3.181536 CGAAGAGCAACAACATCGAAGAG 60.182 47.826 0.00 0.00 43.63 2.85
104 106 2.731451 CGAAGAGCAACAACATCGAAGA 59.269 45.455 0.00 0.00 45.75 2.87
105 107 2.731451 TCGAAGAGCAACAACATCGAAG 59.269 45.455 0.00 0.00 36.50 3.79
106 108 2.749776 TCGAAGAGCAACAACATCGAA 58.250 42.857 0.00 0.00 36.50 3.71
107 109 2.432206 TCGAAGAGCAACAACATCGA 57.568 45.000 0.00 0.00 37.02 3.59
108 110 3.729526 AATCGAAGAGCAACAACATCG 57.270 42.857 0.00 0.00 43.63 3.84
109 111 4.848299 GTGAAATCGAAGAGCAACAACATC 59.152 41.667 0.00 0.00 43.63 3.06
140 142 6.398095 TGTACAGAAATGTCGAATGTCTGAT 58.602 36.000 23.31 14.82 38.37 2.90
150 152 6.611381 ACCAATGATTTGTACAGAAATGTCG 58.389 36.000 0.00 0.00 0.00 4.35
151 153 8.081633 TGAACCAATGATTTGTACAGAAATGTC 58.918 33.333 0.00 0.00 0.00 3.06
152 154 7.867403 GTGAACCAATGATTTGTACAGAAATGT 59.133 33.333 0.00 0.00 0.00 2.71
153 155 7.329226 GGTGAACCAATGATTTGTACAGAAATG 59.671 37.037 0.00 0.00 35.64 2.32
154 156 7.378181 GGTGAACCAATGATTTGTACAGAAAT 58.622 34.615 0.00 0.00 35.64 2.17
155 157 6.514212 CGGTGAACCAATGATTTGTACAGAAA 60.514 38.462 0.00 0.00 35.14 2.52
156 158 5.049060 CGGTGAACCAATGATTTGTACAGAA 60.049 40.000 0.00 0.00 35.14 3.02
554 1304 7.926018 GGTTAACCAAAAGATGTTCACAGATTT 59.074 33.333 20.12 0.00 35.64 2.17
555 1305 7.433680 GGTTAACCAAAAGATGTTCACAGATT 58.566 34.615 20.12 0.00 35.64 2.40
586 1336 6.375174 GGCTGGCAATCCTTTTTATTTGAATT 59.625 34.615 0.00 0.00 0.00 2.17
618 1369 6.558771 TTTTGATCGGTCCATTGCTATATG 57.441 37.500 0.00 0.00 0.00 1.78
632 1383 7.471721 TGCTCACTTTGTATATTTTTGATCGG 58.528 34.615 0.00 0.00 0.00 4.18
646 1447 3.129287 CACAAACCTCTTGCTCACTTTGT 59.871 43.478 0.00 0.00 33.23 2.83
648 1449 2.689983 CCACAAACCTCTTGCTCACTTT 59.310 45.455 0.00 0.00 0.00 2.66
652 1453 0.823356 GCCCACAAACCTCTTGCTCA 60.823 55.000 0.00 0.00 0.00 4.26
672 1473 3.957497 TGTTATAACATTCACATGGGCCC 59.043 43.478 17.59 17.59 34.27 5.80
733 1534 1.125711 AGTGTGAGCCCCTTACGGTT 61.126 55.000 0.00 0.00 0.00 4.44
734 1535 1.535687 AGTGTGAGCCCCTTACGGT 60.536 57.895 0.00 0.00 0.00 4.83
735 1536 1.218316 GAGTGTGAGCCCCTTACGG 59.782 63.158 0.00 0.00 0.00 4.02
736 1537 1.218316 GGAGTGTGAGCCCCTTACG 59.782 63.158 0.00 0.00 0.00 3.18
737 1538 1.218316 CGGAGTGTGAGCCCCTTAC 59.782 63.158 0.00 0.00 0.00 2.34
738 1539 0.970937 CTCGGAGTGTGAGCCCCTTA 60.971 60.000 0.00 0.00 0.00 2.69
770 1571 4.461081 TGGTGGTGTCCTTATACATTTTGC 59.539 41.667 0.00 0.00 0.00 3.68
787 1588 1.027792 GTTGTTCGGTGTGTGGTGGT 61.028 55.000 0.00 0.00 0.00 4.16
846 1650 3.630892 TTTTCATTTATCGTCCCGGGA 57.369 42.857 22.63 22.63 0.00 5.14
929 1743 1.522258 CAAGTTGTTGCGGTCAATTGC 59.478 47.619 0.00 0.00 34.29 3.56
1041 2744 4.056125 TGAGCACGGCCACGAGAG 62.056 66.667 2.24 0.00 44.60 3.20
1042 2745 4.357947 GTGAGCACGGCCACGAGA 62.358 66.667 2.24 0.00 44.60 4.04
1059 2763 2.521958 ATCTGGTTGGGTTCGAGGCG 62.522 60.000 0.00 0.00 0.00 5.52
1062 2766 0.460284 CCGATCTGGTTGGGTTCGAG 60.460 60.000 0.00 0.00 31.74 4.04
1113 2817 1.432270 GCCGATTGGAGAAGAAGCCG 61.432 60.000 1.98 0.00 37.49 5.52
1260 2970 1.543429 GGGAAGAATGGATGTAGGCCG 60.543 57.143 0.00 0.00 0.00 6.13
1343 3053 2.219875 AGCTGTAGTGCACCTGCCT 61.220 57.895 14.63 0.77 41.18 4.75
1381 3091 6.794534 AGTTTGAAGTCCCCTTAATCTTCAT 58.205 36.000 7.17 0.00 43.32 2.57
1386 3096 7.939784 ACAATAGTTTGAAGTCCCCTTAATC 57.060 36.000 0.00 0.00 36.64 1.75
1390 3100 6.183361 ACACTACAATAGTTTGAAGTCCCCTT 60.183 38.462 0.00 0.00 36.76 3.95
1395 3105 7.384115 TGTGCTACACTACAATAGTTTGAAGTC 59.616 37.037 0.00 0.00 36.76 3.01
1413 3123 1.899142 TCTATGCTGTGGTGTGCTACA 59.101 47.619 0.00 0.00 34.85 2.74
1414 3124 2.672961 TCTATGCTGTGGTGTGCTAC 57.327 50.000 0.00 0.00 0.00 3.58
1415 3125 2.301583 TGTTCTATGCTGTGGTGTGCTA 59.698 45.455 0.00 0.00 0.00 3.49
1416 3126 1.072173 TGTTCTATGCTGTGGTGTGCT 59.928 47.619 0.00 0.00 0.00 4.40
1417 3127 1.197721 GTGTTCTATGCTGTGGTGTGC 59.802 52.381 0.00 0.00 0.00 4.57
1489 3199 5.598769 TCATGATAGCACTGATGAGTTGAG 58.401 41.667 0.00 0.00 0.00 3.02
1817 3642 3.589542 CCCCCACCAAGGCTGGAA 61.590 66.667 9.53 0.00 46.92 3.53
1835 3660 1.349627 GTGGCGCGAGATGTTCATG 59.650 57.895 12.10 0.00 0.00 3.07
1859 3684 3.004524 GCTGGAAGTCGTAGAATATCCGT 59.995 47.826 0.00 0.00 39.69 4.69
1910 3735 0.040067 CAACAAGGCAGCCGTTCTTC 60.040 55.000 5.55 0.00 0.00 2.87
2024 3849 3.430374 GCGAGGCAAAGATAGACCTTGTA 60.430 47.826 0.00 0.00 36.26 2.41
2027 3852 1.834263 AGCGAGGCAAAGATAGACCTT 59.166 47.619 0.00 0.00 30.95 3.50
2213 4038 1.002868 GGCTCTCTTCAGCTTGCCA 60.003 57.895 0.00 0.00 39.58 4.92
2229 4054 0.036306 TCTCCCGGAGACTTTTTGGC 59.964 55.000 13.54 0.00 33.35 4.52
2243 4068 5.280215 CCCACCATAGATGTCTAAATCTCCC 60.280 48.000 0.00 0.00 37.98 4.30
2252 4077 1.583556 TGTGCCCACCATAGATGTCT 58.416 50.000 0.00 0.00 0.00 3.41
2272 4097 8.642935 TGTTCCTATTGGTTCAACATTGATTA 57.357 30.769 0.00 0.00 37.00 1.75
2306 4131 4.999950 CAGAGCAAGGATTATGTATCACCC 59.000 45.833 0.00 0.00 34.77 4.61
2388 4213 6.376299 ACAAGCAAAATCATCATCAGCTCTAA 59.624 34.615 0.00 0.00 0.00 2.10
2453 4278 6.109156 TCTTACTTTGTAGCCATGAGTTGA 57.891 37.500 0.00 0.00 0.00 3.18
2789 5597 5.316987 AGAAACTAAGATTGGAAGGTGTGG 58.683 41.667 0.00 0.00 0.00 4.17
2794 5602 6.384305 TCTCCCTAGAAACTAAGATTGGAAGG 59.616 42.308 0.00 0.00 0.00 3.46
2906 5909 5.925509 AGGTCACTAACAGCTTCTAAAACA 58.074 37.500 0.00 0.00 0.00 2.83
3180 6251 4.460263 GCATATATTGTCCAGGACCACAA 58.540 43.478 17.59 5.89 36.94 3.33
3342 6455 7.916977 CCCATCAATCAATGTATAAACACAGTG 59.083 37.037 0.00 0.00 43.89 3.66
3450 6602 0.460987 CCTGACTTCCATCCGCAGAC 60.461 60.000 0.00 0.00 0.00 3.51
3489 6641 9.843334 CTACAGGCTACAACTAAGCTATATTAC 57.157 37.037 0.00 0.00 39.97 1.89
3837 7163 2.677003 CGAATGACCGTGGCACCAC 61.677 63.158 12.86 9.88 43.01 4.16
3841 7167 3.309436 CTCCCGAATGACCGTGGCA 62.309 63.158 0.00 0.00 0.00 4.92
3847 7173 2.511600 CGTGCCTCCCGAATGACC 60.512 66.667 0.00 0.00 0.00 4.02
3848 7174 2.511600 CCGTGCCTCCCGAATGAC 60.512 66.667 0.00 0.00 0.00 3.06
3849 7175 3.781307 CCCGTGCCTCCCGAATGA 61.781 66.667 0.00 0.00 0.00 2.57
4037 7367 2.052690 GGACCGCCTGAGTAGCTGA 61.053 63.158 0.00 0.00 0.00 4.26
4095 7428 1.744368 CAGCATCACTTCGCAGGCT 60.744 57.895 0.00 0.00 0.00 4.58
4183 7516 1.611673 CCCACGAGCAGAGGACAAATT 60.612 52.381 0.00 0.00 31.73 1.82
4231 7564 1.663739 GTGTCGTAGCTCCACCACA 59.336 57.895 0.00 0.00 0.00 4.17
4267 7600 3.491447 GCAAGCACCTTCAGACAAACAAT 60.491 43.478 0.00 0.00 0.00 2.71
4272 7605 2.057137 AAGCAAGCACCTTCAGACAA 57.943 45.000 0.00 0.00 0.00 3.18
4311 7644 2.093973 GGAGAGACACACCATCATCGTT 60.094 50.000 0.00 0.00 0.00 3.85
4315 7648 1.836166 CCAGGAGAGACACACCATCAT 59.164 52.381 0.00 0.00 0.00 2.45
4371 7704 3.356639 CTCGCCGCAGAGCCAACTA 62.357 63.158 0.00 0.00 0.00 2.24
4439 7772 4.798682 CACCCGCTACCCCTCCCT 62.799 72.222 0.00 0.00 0.00 4.20
4550 7886 2.250939 CGGAGCCAAAGTTGCGACA 61.251 57.895 6.90 0.00 40.46 4.35
4646 7987 1.826720 GACCCACAACAATGCATCCAT 59.173 47.619 0.00 0.00 0.00 3.41
4697 8038 1.622312 AGGACGGACTAGGGTTTTCAC 59.378 52.381 0.00 0.00 0.00 3.18
4698 8039 2.019807 AGGACGGACTAGGGTTTTCA 57.980 50.000 0.00 0.00 0.00 2.69
4699 8040 3.413846 AAAGGACGGACTAGGGTTTTC 57.586 47.619 0.00 0.00 0.00 2.29
4700 8041 3.483421 CAAAAGGACGGACTAGGGTTTT 58.517 45.455 0.00 0.00 0.00 2.43
4701 8042 2.224695 CCAAAAGGACGGACTAGGGTTT 60.225 50.000 0.00 0.00 0.00 3.27
4702 8043 1.350019 CCAAAAGGACGGACTAGGGTT 59.650 52.381 0.00 0.00 0.00 4.11
4703 8044 0.981943 CCAAAAGGACGGACTAGGGT 59.018 55.000 0.00 0.00 0.00 4.34
4849 8890 0.907704 ACTAGACCATCCCACGCCAA 60.908 55.000 0.00 0.00 0.00 4.52
4906 8947 1.063567 AGGAGATAGCAAGGACCGAGT 60.064 52.381 0.00 0.00 0.00 4.18
5054 9527 2.450160 GCAACACCGAACAAAAGACAG 58.550 47.619 0.00 0.00 0.00 3.51
5060 9533 0.653636 GAGACGCAACACCGAACAAA 59.346 50.000 0.00 0.00 0.00 2.83
5066 9539 1.157870 AAACAGGAGACGCAACACCG 61.158 55.000 0.00 0.00 0.00 4.94
5180 9654 3.305110 CAAACAGCCAAACCGATACAAC 58.695 45.455 0.00 0.00 0.00 3.32
5203 9677 8.552034 GCTTTCGCCCAGCTTTATATATATAAG 58.448 37.037 13.55 9.99 34.15 1.73
5673 11073 1.882623 GGCTGGGTGAGTGAAGAAAAG 59.117 52.381 0.00 0.00 0.00 2.27
5974 11377 0.108585 AGAGCAAGGAAACCAGCGAA 59.891 50.000 0.00 0.00 33.22 4.70
6301 11724 1.100510 CATGGTCCAAGCATCAGTGG 58.899 55.000 0.00 0.00 33.46 4.00
6402 11825 7.394359 ACCATGTTCACTTGACAATATAAGCTT 59.606 33.333 3.48 3.48 0.00 3.74
6458 11881 7.175990 TCCTGGGTTCTGTTTTATTCATGTAAC 59.824 37.037 0.00 0.00 0.00 2.50
6483 11914 6.325286 ACTGATCCAGACTATTAAGGTCCTTC 59.675 42.308 7.61 0.00 35.18 3.46
6524 11955 3.414272 GCACGGGCATCTTGCTAG 58.586 61.111 3.77 0.00 44.28 3.42
6540 11971 1.199789 TCTTGATGTTCCGTGCAATGC 59.800 47.619 0.00 0.00 0.00 3.56
6542 11973 2.159338 GCATCTTGATGTTCCGTGCAAT 60.159 45.455 11.61 0.00 0.00 3.56
6545 11976 0.804364 TGCATCTTGATGTTCCGTGC 59.196 50.000 11.61 0.00 0.00 5.34
6546 11977 3.770263 AATGCATCTTGATGTTCCGTG 57.230 42.857 0.00 0.00 0.00 4.94
6579 12010 2.517959 CATGGGTCAATCACAACAGGT 58.482 47.619 0.00 0.00 31.12 4.00
6580 12011 1.203052 GCATGGGTCAATCACAACAGG 59.797 52.381 0.00 0.00 31.12 4.00
6581 12012 1.135603 CGCATGGGTCAATCACAACAG 60.136 52.381 0.68 0.00 31.12 3.16
6582 12013 0.880441 CGCATGGGTCAATCACAACA 59.120 50.000 0.68 0.00 31.12 3.33
6583 12014 0.171007 CCGCATGGGTCAATCACAAC 59.829 55.000 9.14 0.00 31.12 3.32
6584 12015 2.565647 CCGCATGGGTCAATCACAA 58.434 52.632 9.14 0.00 31.12 3.33
6585 12016 4.317359 CCGCATGGGTCAATCACA 57.683 55.556 9.14 0.00 0.00 3.58
6602 12033 8.570068 TTAGTTTTTACACATGGGATTACTCC 57.430 34.615 0.00 0.00 41.26 3.85
6604 12035 9.747898 TCATTAGTTTTTACACATGGGATTACT 57.252 29.630 0.00 0.12 0.00 2.24
6620 12051 9.319143 CCTGTTTCTCGAGATATCATTAGTTTT 57.681 33.333 17.44 0.00 0.00 2.43
6621 12052 8.696374 TCCTGTTTCTCGAGATATCATTAGTTT 58.304 33.333 17.44 0.00 0.00 2.66
6622 12053 8.239038 TCCTGTTTCTCGAGATATCATTAGTT 57.761 34.615 17.44 0.00 0.00 2.24
6623 12054 7.721842 TCTCCTGTTTCTCGAGATATCATTAGT 59.278 37.037 17.44 0.00 0.00 2.24
6624 12055 8.105097 TCTCCTGTTTCTCGAGATATCATTAG 57.895 38.462 17.44 13.88 0.00 1.73
6625 12056 7.939588 TCTCTCCTGTTTCTCGAGATATCATTA 59.060 37.037 17.44 0.00 32.42 1.90
6626 12057 6.775142 TCTCTCCTGTTTCTCGAGATATCATT 59.225 38.462 17.44 0.00 32.42 2.57
6627 12058 6.303054 TCTCTCCTGTTTCTCGAGATATCAT 58.697 40.000 17.44 0.00 32.42 2.45
6628 12059 5.685728 TCTCTCCTGTTTCTCGAGATATCA 58.314 41.667 17.44 14.00 32.42 2.15
6629 12060 6.817765 ATCTCTCCTGTTTCTCGAGATATC 57.182 41.667 17.44 10.15 39.08 1.63
6630 12061 7.393234 CCTTATCTCTCCTGTTTCTCGAGATAT 59.607 40.741 17.44 0.00 41.01 1.63
6631 12062 6.712998 CCTTATCTCTCCTGTTTCTCGAGATA 59.287 42.308 17.44 8.98 40.69 1.98
6632 12063 5.534654 CCTTATCTCTCCTGTTTCTCGAGAT 59.465 44.000 17.44 0.00 42.34 2.75
6633 12064 4.884744 CCTTATCTCTCCTGTTTCTCGAGA 59.115 45.833 12.08 12.08 35.46 4.04
6634 12065 4.642885 ACCTTATCTCTCCTGTTTCTCGAG 59.357 45.833 5.93 5.93 0.00 4.04
6635 12066 4.399618 CACCTTATCTCTCCTGTTTCTCGA 59.600 45.833 0.00 0.00 0.00 4.04
6636 12067 4.399618 TCACCTTATCTCTCCTGTTTCTCG 59.600 45.833 0.00 0.00 0.00 4.04
6637 12068 5.163457 CCTCACCTTATCTCTCCTGTTTCTC 60.163 48.000 0.00 0.00 0.00 2.87
6638 12069 4.714308 CCTCACCTTATCTCTCCTGTTTCT 59.286 45.833 0.00 0.00 0.00 2.52
6639 12070 4.712337 TCCTCACCTTATCTCTCCTGTTTC 59.288 45.833 0.00 0.00 0.00 2.78
6640 12071 4.689062 TCCTCACCTTATCTCTCCTGTTT 58.311 43.478 0.00 0.00 0.00 2.83
6641 12072 4.285863 CTCCTCACCTTATCTCTCCTGTT 58.714 47.826 0.00 0.00 0.00 3.16
6642 12073 3.373658 CCTCCTCACCTTATCTCTCCTGT 60.374 52.174 0.00 0.00 0.00 4.00
6643 12074 3.117322 TCCTCCTCACCTTATCTCTCCTG 60.117 52.174 0.00 0.00 0.00 3.86
6644 12075 3.135279 TCCTCCTCACCTTATCTCTCCT 58.865 50.000 0.00 0.00 0.00 3.69
6645 12076 3.117284 ACTCCTCCTCACCTTATCTCTCC 60.117 52.174 0.00 0.00 0.00 3.71
6646 12077 3.888930 CACTCCTCCTCACCTTATCTCTC 59.111 52.174 0.00 0.00 0.00 3.20
6647 12078 3.373658 CCACTCCTCCTCACCTTATCTCT 60.374 52.174 0.00 0.00 0.00 3.10
6648 12079 2.962421 CCACTCCTCCTCACCTTATCTC 59.038 54.545 0.00 0.00 0.00 2.75
6649 12080 2.359781 CCCACTCCTCCTCACCTTATCT 60.360 54.545 0.00 0.00 0.00 1.98
6650 12081 2.043227 CCCACTCCTCCTCACCTTATC 58.957 57.143 0.00 0.00 0.00 1.75
6651 12082 1.344496 CCCCACTCCTCCTCACCTTAT 60.344 57.143 0.00 0.00 0.00 1.73
6652 12083 0.042731 CCCCACTCCTCCTCACCTTA 59.957 60.000 0.00 0.00 0.00 2.69
6653 12084 1.229658 CCCCACTCCTCCTCACCTT 60.230 63.158 0.00 0.00 0.00 3.50
6654 12085 2.452114 CCCCACTCCTCCTCACCT 59.548 66.667 0.00 0.00 0.00 4.00
6655 12086 3.403558 GCCCCACTCCTCCTCACC 61.404 72.222 0.00 0.00 0.00 4.02
6656 12087 3.775654 CGCCCCACTCCTCCTCAC 61.776 72.222 0.00 0.00 0.00 3.51
6657 12088 4.316823 ACGCCCCACTCCTCCTCA 62.317 66.667 0.00 0.00 0.00 3.86
6658 12089 3.775654 CACGCCCCACTCCTCCTC 61.776 72.222 0.00 0.00 0.00 3.71
6661 12092 4.394712 CACCACGCCCCACTCCTC 62.395 72.222 0.00 0.00 0.00 3.71
6666 12097 3.860930 AATCACCACCACGCCCCAC 62.861 63.158 0.00 0.00 0.00 4.61
6667 12098 3.575247 AATCACCACCACGCCCCA 61.575 61.111 0.00 0.00 0.00 4.96
6668 12099 2.837031 ATCAATCACCACCACGCCCC 62.837 60.000 0.00 0.00 0.00 5.80
6669 12100 1.378514 ATCAATCACCACCACGCCC 60.379 57.895 0.00 0.00 0.00 6.13
6670 12101 1.656818 CCATCAATCACCACCACGCC 61.657 60.000 0.00 0.00 0.00 5.68
6671 12102 0.960364 ACCATCAATCACCACCACGC 60.960 55.000 0.00 0.00 0.00 5.34
6672 12103 1.086696 GACCATCAATCACCACCACG 58.913 55.000 0.00 0.00 0.00 4.94
6673 12104 1.086696 CGACCATCAATCACCACCAC 58.913 55.000 0.00 0.00 0.00 4.16
6674 12105 0.035534 CCGACCATCAATCACCACCA 60.036 55.000 0.00 0.00 0.00 4.17
6675 12106 0.251916 TCCGACCATCAATCACCACC 59.748 55.000 0.00 0.00 0.00 4.61
6676 12107 1.066143 AGTCCGACCATCAATCACCAC 60.066 52.381 0.00 0.00 0.00 4.16
6677 12108 1.066215 CAGTCCGACCATCAATCACCA 60.066 52.381 0.00 0.00 0.00 4.17
6678 12109 1.207089 TCAGTCCGACCATCAATCACC 59.793 52.381 0.00 0.00 0.00 4.02
6679 12110 2.544685 CTCAGTCCGACCATCAATCAC 58.455 52.381 0.00 0.00 0.00 3.06
6680 12111 1.134699 GCTCAGTCCGACCATCAATCA 60.135 52.381 0.00 0.00 0.00 2.57
6681 12112 1.576356 GCTCAGTCCGACCATCAATC 58.424 55.000 0.00 0.00 0.00 2.67
6682 12113 0.179100 CGCTCAGTCCGACCATCAAT 60.179 55.000 0.00 0.00 0.00 2.57
6683 12114 1.215382 CGCTCAGTCCGACCATCAA 59.785 57.895 0.00 0.00 0.00 2.57
6684 12115 2.710902 CCGCTCAGTCCGACCATCA 61.711 63.158 0.00 0.00 0.00 3.07
6685 12116 2.105128 CCGCTCAGTCCGACCATC 59.895 66.667 0.00 0.00 0.00 3.51
6686 12117 2.362503 TCCGCTCAGTCCGACCAT 60.363 61.111 0.00 0.00 0.00 3.55
6687 12118 3.062466 CTCCGCTCAGTCCGACCA 61.062 66.667 0.00 0.00 0.00 4.02
6688 12119 3.827898 CCTCCGCTCAGTCCGACC 61.828 72.222 0.00 0.00 0.00 4.79
6689 12120 4.500116 GCCTCCGCTCAGTCCGAC 62.500 72.222 0.00 0.00 0.00 4.79
6691 12122 3.842923 ATGCCTCCGCTCAGTCCG 61.843 66.667 0.00 0.00 35.36 4.79
6692 12123 2.202987 CATGCCTCCGCTCAGTCC 60.203 66.667 0.00 0.00 35.36 3.85
6693 12124 2.202987 CCATGCCTCCGCTCAGTC 60.203 66.667 0.00 0.00 35.36 3.51
6694 12125 3.790437 CCCATGCCTCCGCTCAGT 61.790 66.667 0.00 0.00 35.36 3.41
6695 12126 4.559063 CCCCATGCCTCCGCTCAG 62.559 72.222 0.00 0.00 35.36 3.35
6697 12128 3.564218 ATCCCCATGCCTCCGCTC 61.564 66.667 0.00 0.00 35.36 5.03
6698 12129 3.882326 CATCCCCATGCCTCCGCT 61.882 66.667 0.00 0.00 35.36 5.52
6699 12130 4.962836 CCATCCCCATGCCTCCGC 62.963 72.222 0.00 0.00 0.00 5.54
6700 12131 3.170672 TCCATCCCCATGCCTCCG 61.171 66.667 0.00 0.00 0.00 4.63
6701 12132 2.517919 GTCCATCCCCATGCCTCC 59.482 66.667 0.00 0.00 0.00 4.30
6702 12133 2.111878 CGTCCATCCCCATGCCTC 59.888 66.667 0.00 0.00 0.00 4.70
6703 12134 2.366837 TCGTCCATCCCCATGCCT 60.367 61.111 0.00 0.00 0.00 4.75
6704 12135 2.203209 GTCGTCCATCCCCATGCC 60.203 66.667 0.00 0.00 0.00 4.40
6705 12136 2.588877 CGTCGTCCATCCCCATGC 60.589 66.667 0.00 0.00 0.00 4.06
6706 12137 2.588877 GCGTCGTCCATCCCCATG 60.589 66.667 0.00 0.00 0.00 3.66
6707 12138 3.861797 GGCGTCGTCCATCCCCAT 61.862 66.667 0.00 0.00 0.00 4.00
6710 12141 2.473664 CTATCGGCGTCGTCCATCCC 62.474 65.000 10.18 0.00 37.69 3.85
6711 12142 1.081376 CTATCGGCGTCGTCCATCC 60.081 63.158 10.18 0.00 37.69 3.51
6712 12143 0.660595 CACTATCGGCGTCGTCCATC 60.661 60.000 10.18 0.00 37.69 3.51
6713 12144 1.359117 CACTATCGGCGTCGTCCAT 59.641 57.895 10.18 0.00 37.69 3.41
6714 12145 2.767445 CCACTATCGGCGTCGTCCA 61.767 63.158 10.18 0.00 37.69 4.02
6715 12146 2.025727 CCACTATCGGCGTCGTCC 59.974 66.667 10.18 0.00 37.69 4.79
6716 12147 2.654404 GCCACTATCGGCGTCGTC 60.654 66.667 10.18 0.00 43.52 4.20
6723 12154 1.893808 GCATGGTGGCCACTATCGG 60.894 63.158 33.91 22.82 35.80 4.18
6724 12155 0.392706 TAGCATGGTGGCCACTATCG 59.607 55.000 33.91 25.71 35.80 2.92
6725 12156 1.694150 TCTAGCATGGTGGCCACTATC 59.306 52.381 33.91 24.54 35.80 2.08
6726 12157 1.806496 TCTAGCATGGTGGCCACTAT 58.194 50.000 33.91 30.80 35.80 2.12
6727 12158 1.806496 ATCTAGCATGGTGGCCACTA 58.194 50.000 33.91 29.93 35.80 2.74
6728 12159 0.921896 AATCTAGCATGGTGGCCACT 59.078 50.000 33.91 17.44 35.80 4.00
6729 12160 1.027357 CAATCTAGCATGGTGGCCAC 58.973 55.000 28.57 28.57 35.80 5.01
6730 12161 0.625316 ACAATCTAGCATGGTGGCCA 59.375 50.000 0.00 0.00 38.19 5.36
6731 12162 1.678101 GAACAATCTAGCATGGTGGCC 59.322 52.381 7.89 0.00 0.00 5.36
6732 12163 2.648059 AGAACAATCTAGCATGGTGGC 58.352 47.619 7.89 0.00 32.88 5.01
6764 12195 8.140677 CAACCTCATTGTTGAGCAATTAAAAA 57.859 30.769 0.00 0.00 46.77 1.94
6765 12196 7.712264 CAACCTCATTGTTGAGCAATTAAAA 57.288 32.000 0.00 0.00 46.77 1.52
6779 12210 4.080356 TCCTTATCTCCCACAACCTCATTG 60.080 45.833 0.00 0.00 44.60 2.82
6780 12211 4.111577 TCCTTATCTCCCACAACCTCATT 58.888 43.478 0.00 0.00 0.00 2.57
6781 12212 3.736094 TCCTTATCTCCCACAACCTCAT 58.264 45.455 0.00 0.00 0.00 2.90
6782 12213 3.199442 TCCTTATCTCCCACAACCTCA 57.801 47.619 0.00 0.00 0.00 3.86
6783 12214 3.711704 TCATCCTTATCTCCCACAACCTC 59.288 47.826 0.00 0.00 0.00 3.85
6784 12215 3.736094 TCATCCTTATCTCCCACAACCT 58.264 45.455 0.00 0.00 0.00 3.50
6785 12216 4.200092 GTTCATCCTTATCTCCCACAACC 58.800 47.826 0.00 0.00 0.00 3.77
6786 12217 3.871594 CGTTCATCCTTATCTCCCACAAC 59.128 47.826 0.00 0.00 0.00 3.32
6787 12218 3.772572 TCGTTCATCCTTATCTCCCACAA 59.227 43.478 0.00 0.00 0.00 3.33
6788 12219 3.371034 TCGTTCATCCTTATCTCCCACA 58.629 45.455 0.00 0.00 0.00 4.17
6789 12220 3.243907 CCTCGTTCATCCTTATCTCCCAC 60.244 52.174 0.00 0.00 0.00 4.61
6790 12221 2.965831 CCTCGTTCATCCTTATCTCCCA 59.034 50.000 0.00 0.00 0.00 4.37
6791 12222 2.300437 CCCTCGTTCATCCTTATCTCCC 59.700 54.545 0.00 0.00 0.00 4.30
6792 12223 3.231818 TCCCTCGTTCATCCTTATCTCC 58.768 50.000 0.00 0.00 0.00 3.71
6793 12224 4.262249 CCTTCCCTCGTTCATCCTTATCTC 60.262 50.000 0.00 0.00 0.00 2.75
6794 12225 3.643792 CCTTCCCTCGTTCATCCTTATCT 59.356 47.826 0.00 0.00 0.00 1.98
6795 12226 3.244249 CCCTTCCCTCGTTCATCCTTATC 60.244 52.174 0.00 0.00 0.00 1.75
6796 12227 2.706190 CCCTTCCCTCGTTCATCCTTAT 59.294 50.000 0.00 0.00 0.00 1.73
6797 12228 2.116238 CCCTTCCCTCGTTCATCCTTA 58.884 52.381 0.00 0.00 0.00 2.69
6798 12229 0.912486 CCCTTCCCTCGTTCATCCTT 59.088 55.000 0.00 0.00 0.00 3.36
6799 12230 1.627297 GCCCTTCCCTCGTTCATCCT 61.627 60.000 0.00 0.00 0.00 3.24
6800 12231 1.153147 GCCCTTCCCTCGTTCATCC 60.153 63.158 0.00 0.00 0.00 3.51
6801 12232 0.253327 AAGCCCTTCCCTCGTTCATC 59.747 55.000 0.00 0.00 0.00 2.92
6802 12233 1.580059 TAAGCCCTTCCCTCGTTCAT 58.420 50.000 0.00 0.00 0.00 2.57
6803 12234 1.485066 GATAAGCCCTTCCCTCGTTCA 59.515 52.381 0.00 0.00 0.00 3.18
6804 12235 1.763545 AGATAAGCCCTTCCCTCGTTC 59.236 52.381 0.00 0.00 0.00 3.95
6805 12236 1.486726 CAGATAAGCCCTTCCCTCGTT 59.513 52.381 0.00 0.00 0.00 3.85
6806 12237 1.123928 CAGATAAGCCCTTCCCTCGT 58.876 55.000 0.00 0.00 0.00 4.18
6807 12238 0.250081 GCAGATAAGCCCTTCCCTCG 60.250 60.000 0.00 0.00 0.00 4.63
6808 12239 0.839946 TGCAGATAAGCCCTTCCCTC 59.160 55.000 0.00 0.00 0.00 4.30
6809 12240 1.298953 TTGCAGATAAGCCCTTCCCT 58.701 50.000 0.00 0.00 0.00 4.20
6810 12241 2.143876 TTTGCAGATAAGCCCTTCCC 57.856 50.000 0.00 0.00 0.00 3.97
6811 12242 3.026694 ACATTTGCAGATAAGCCCTTCC 58.973 45.455 0.00 0.00 0.00 3.46
6812 12243 3.181483 CCACATTTGCAGATAAGCCCTTC 60.181 47.826 0.00 0.00 0.00 3.46
6813 12244 2.762327 CCACATTTGCAGATAAGCCCTT 59.238 45.455 0.00 0.00 0.00 3.95
6814 12245 2.025037 TCCACATTTGCAGATAAGCCCT 60.025 45.455 0.00 0.00 0.00 5.19
6815 12246 2.360165 CTCCACATTTGCAGATAAGCCC 59.640 50.000 0.00 0.00 0.00 5.19
6816 12247 3.282021 TCTCCACATTTGCAGATAAGCC 58.718 45.455 0.00 0.00 0.00 4.35
6817 12248 4.194640 TCTCTCCACATTTGCAGATAAGC 58.805 43.478 0.00 0.00 0.00 3.09
6818 12249 4.815308 CCTCTCTCCACATTTGCAGATAAG 59.185 45.833 0.00 0.00 0.00 1.73
6819 12250 4.225942 ACCTCTCTCCACATTTGCAGATAA 59.774 41.667 0.00 0.00 0.00 1.75
6820 12251 3.776969 ACCTCTCTCCACATTTGCAGATA 59.223 43.478 0.00 0.00 0.00 1.98
6821 12252 2.575279 ACCTCTCTCCACATTTGCAGAT 59.425 45.455 0.00 0.00 0.00 2.90
6822 12253 1.980765 ACCTCTCTCCACATTTGCAGA 59.019 47.619 0.00 0.00 0.00 4.26
6823 12254 2.082231 CACCTCTCTCCACATTTGCAG 58.918 52.381 0.00 0.00 0.00 4.41
6824 12255 1.883638 GCACCTCTCTCCACATTTGCA 60.884 52.381 0.00 0.00 0.00 4.08
6825 12256 0.807496 GCACCTCTCTCCACATTTGC 59.193 55.000 0.00 0.00 0.00 3.68
6826 12257 1.081892 CGCACCTCTCTCCACATTTG 58.918 55.000 0.00 0.00 0.00 2.32
6827 12258 0.036010 CCGCACCTCTCTCCACATTT 60.036 55.000 0.00 0.00 0.00 2.32
6828 12259 1.599047 CCGCACCTCTCTCCACATT 59.401 57.895 0.00 0.00 0.00 2.71
6829 12260 2.362369 CCCGCACCTCTCTCCACAT 61.362 63.158 0.00 0.00 0.00 3.21
6830 12261 2.435120 TACCCGCACCTCTCTCCACA 62.435 60.000 0.00 0.00 0.00 4.17
6831 12262 1.043673 ATACCCGCACCTCTCTCCAC 61.044 60.000 0.00 0.00 0.00 4.02
6832 12263 0.755698 GATACCCGCACCTCTCTCCA 60.756 60.000 0.00 0.00 0.00 3.86
6833 12264 0.468400 AGATACCCGCACCTCTCTCC 60.468 60.000 0.00 0.00 0.00 3.71
6834 12265 1.404843 AAGATACCCGCACCTCTCTC 58.595 55.000 0.00 0.00 0.00 3.20
6835 12266 1.867363 AAAGATACCCGCACCTCTCT 58.133 50.000 0.00 0.00 0.00 3.10
6836 12267 2.678336 CAAAAAGATACCCGCACCTCTC 59.322 50.000 0.00 0.00 0.00 3.20
6837 12268 2.711542 CAAAAAGATACCCGCACCTCT 58.288 47.619 0.00 0.00 0.00 3.69
6838 12269 1.132453 GCAAAAAGATACCCGCACCTC 59.868 52.381 0.00 0.00 0.00 3.85
6839 12270 1.173913 GCAAAAAGATACCCGCACCT 58.826 50.000 0.00 0.00 0.00 4.00
6840 12271 0.885196 TGCAAAAAGATACCCGCACC 59.115 50.000 0.00 0.00 0.00 5.01
6841 12272 2.715737 TTGCAAAAAGATACCCGCAC 57.284 45.000 0.00 0.00 0.00 5.34
6842 12273 3.735237 TTTTGCAAAAAGATACCCGCA 57.265 38.095 21.94 0.00 0.00 5.69
6843 12274 4.956793 CAATTTTGCAAAAAGATACCCGC 58.043 39.130 27.10 0.00 0.00 6.13
6858 12289 4.211794 AGAAAGCAAACGATGGCAATTTTG 59.788 37.500 12.14 12.14 33.03 2.44
6859 12290 4.379652 AGAAAGCAAACGATGGCAATTTT 58.620 34.783 0.00 0.00 0.00 1.82
6860 12291 3.993920 AGAAAGCAAACGATGGCAATTT 58.006 36.364 0.00 0.00 0.00 1.82
6861 12292 3.665745 AGAAAGCAAACGATGGCAATT 57.334 38.095 0.00 0.00 0.00 2.32
6862 12293 4.202050 GGATAGAAAGCAAACGATGGCAAT 60.202 41.667 0.00 0.00 0.00 3.56
6863 12294 3.128589 GGATAGAAAGCAAACGATGGCAA 59.871 43.478 0.00 0.00 0.00 4.52
6864 12295 2.682856 GGATAGAAAGCAAACGATGGCA 59.317 45.455 0.00 0.00 0.00 4.92
6865 12296 2.286418 CGGATAGAAAGCAAACGATGGC 60.286 50.000 0.00 0.00 0.00 4.40
6866 12297 2.936498 ACGGATAGAAAGCAAACGATGG 59.064 45.455 0.00 0.00 0.00 3.51
6867 12298 3.616821 TGACGGATAGAAAGCAAACGATG 59.383 43.478 0.00 0.00 0.00 3.84
6868 12299 3.857052 TGACGGATAGAAAGCAAACGAT 58.143 40.909 0.00 0.00 0.00 3.73
6869 12300 3.057104 TCTGACGGATAGAAAGCAAACGA 60.057 43.478 0.00 0.00 0.00 3.85
6870 12301 3.250744 TCTGACGGATAGAAAGCAAACG 58.749 45.455 0.00 0.00 0.00 3.60
6871 12302 8.082852 TCTATATCTGACGGATAGAAAGCAAAC 58.917 37.037 9.78 0.00 39.89 2.93
6872 12303 8.178313 TCTATATCTGACGGATAGAAAGCAAA 57.822 34.615 9.78 0.00 39.89 3.68
6873 12304 7.761038 TCTATATCTGACGGATAGAAAGCAA 57.239 36.000 9.78 0.00 39.89 3.91
6874 12305 7.831690 AGATCTATATCTGACGGATAGAAAGCA 59.168 37.037 9.78 0.44 41.08 3.91
6875 12306 8.220755 AGATCTATATCTGACGGATAGAAAGC 57.779 38.462 9.78 0.00 41.08 3.51
6889 12320 9.062524 GCAATATAGACCGTCAGATCTATATCT 57.937 37.037 12.07 0.00 44.71 1.98
6890 12321 8.841300 TGCAATATAGACCGTCAGATCTATATC 58.159 37.037 12.07 4.58 44.71 1.63
6891 12322 8.753497 TGCAATATAGACCGTCAGATCTATAT 57.247 34.615 0.00 7.62 46.24 0.86
6892 12323 8.575649 TTGCAATATAGACCGTCAGATCTATA 57.424 34.615 0.00 4.02 42.05 1.31
6893 12324 7.394641 TCTTGCAATATAGACCGTCAGATCTAT 59.605 37.037 0.00 0.00 40.47 1.98
6894 12325 6.715264 TCTTGCAATATAGACCGTCAGATCTA 59.285 38.462 0.00 0.00 32.11 1.98
6895 12326 5.536538 TCTTGCAATATAGACCGTCAGATCT 59.463 40.000 0.00 0.00 0.00 2.75
6896 12327 5.773575 TCTTGCAATATAGACCGTCAGATC 58.226 41.667 0.00 0.00 0.00 2.75
6897 12328 5.791336 TCTTGCAATATAGACCGTCAGAT 57.209 39.130 0.00 0.00 0.00 2.90
6898 12329 5.509670 CCATCTTGCAATATAGACCGTCAGA 60.510 44.000 0.00 0.00 0.00 3.27
6899 12330 4.687948 CCATCTTGCAATATAGACCGTCAG 59.312 45.833 0.00 0.00 0.00 3.51
6900 12331 4.631131 CCATCTTGCAATATAGACCGTCA 58.369 43.478 0.00 0.00 0.00 4.35
6901 12332 3.433615 GCCATCTTGCAATATAGACCGTC 59.566 47.826 0.00 0.00 0.00 4.79
6902 12333 3.181455 TGCCATCTTGCAATATAGACCGT 60.181 43.478 0.00 0.00 38.56 4.83
6903 12334 3.402110 TGCCATCTTGCAATATAGACCG 58.598 45.455 0.00 0.00 38.56 4.79
6904 12335 4.453819 GTCTGCCATCTTGCAATATAGACC 59.546 45.833 12.12 0.64 41.51 3.85
6905 12336 5.049818 GTGTCTGCCATCTTGCAATATAGAC 60.050 44.000 14.68 14.68 41.51 2.59
6906 12337 5.059161 GTGTCTGCCATCTTGCAATATAGA 58.941 41.667 0.00 0.00 41.51 1.98
6907 12338 4.818005 TGTGTCTGCCATCTTGCAATATAG 59.182 41.667 0.00 0.00 41.51 1.31
6908 12339 4.576053 GTGTGTCTGCCATCTTGCAATATA 59.424 41.667 0.00 0.00 41.51 0.86
6909 12340 3.379372 GTGTGTCTGCCATCTTGCAATAT 59.621 43.478 0.00 0.00 41.51 1.28
6910 12341 2.749076 GTGTGTCTGCCATCTTGCAATA 59.251 45.455 0.00 0.00 41.51 1.90
6911 12342 1.542915 GTGTGTCTGCCATCTTGCAAT 59.457 47.619 0.00 0.00 41.51 3.56
6912 12343 0.953727 GTGTGTCTGCCATCTTGCAA 59.046 50.000 0.00 0.00 41.51 4.08
6913 12344 0.179023 TGTGTGTCTGCCATCTTGCA 60.179 50.000 0.00 0.00 39.37 4.08
6914 12345 0.953727 TTGTGTGTCTGCCATCTTGC 59.046 50.000 0.00 0.00 0.00 4.01
6915 12346 2.815503 TGATTGTGTGTCTGCCATCTTG 59.184 45.455 0.00 0.00 0.00 3.02
6916 12347 3.144657 TGATTGTGTGTCTGCCATCTT 57.855 42.857 0.00 0.00 0.00 2.40
6917 12348 2.865119 TGATTGTGTGTCTGCCATCT 57.135 45.000 0.00 0.00 0.00 2.90
6918 12349 3.011818 TGATGATTGTGTGTCTGCCATC 58.988 45.455 0.00 0.00 0.00 3.51
6919 12350 2.751259 GTGATGATTGTGTGTCTGCCAT 59.249 45.455 0.00 0.00 0.00 4.40
6920 12351 2.153645 GTGATGATTGTGTGTCTGCCA 58.846 47.619 0.00 0.00 0.00 4.92
6921 12352 1.470098 GGTGATGATTGTGTGTCTGCC 59.530 52.381 0.00 0.00 0.00 4.85
6922 12353 2.153645 TGGTGATGATTGTGTGTCTGC 58.846 47.619 0.00 0.00 0.00 4.26
6923 12354 3.817084 AGTTGGTGATGATTGTGTGTCTG 59.183 43.478 0.00 0.00 0.00 3.51
6924 12355 4.067896 GAGTTGGTGATGATTGTGTGTCT 58.932 43.478 0.00 0.00 0.00 3.41
6925 12356 3.120546 CGAGTTGGTGATGATTGTGTGTC 60.121 47.826 0.00 0.00 0.00 3.67
6926 12357 2.807967 CGAGTTGGTGATGATTGTGTGT 59.192 45.455 0.00 0.00 0.00 3.72
6927 12358 2.160219 CCGAGTTGGTGATGATTGTGTG 59.840 50.000 0.00 0.00 0.00 3.82
6928 12359 2.426522 CCGAGTTGGTGATGATTGTGT 58.573 47.619 0.00 0.00 0.00 3.72
6950 12381 8.700051 AGCAGCTCATCTCTACTCTTATAAAAA 58.300 33.333 0.00 0.00 0.00 1.94
6951 12382 8.243961 AGCAGCTCATCTCTACTCTTATAAAA 57.756 34.615 0.00 0.00 0.00 1.52
6952 12383 7.831691 AGCAGCTCATCTCTACTCTTATAAA 57.168 36.000 0.00 0.00 0.00 1.40
6953 12384 7.831691 AAGCAGCTCATCTCTACTCTTATAA 57.168 36.000 0.00 0.00 0.00 0.98
6954 12385 7.286546 ACAAAGCAGCTCATCTCTACTCTTATA 59.713 37.037 0.00 0.00 0.00 0.98
6955 12386 6.098124 ACAAAGCAGCTCATCTCTACTCTTAT 59.902 38.462 0.00 0.00 0.00 1.73
6956 12387 5.420421 ACAAAGCAGCTCATCTCTACTCTTA 59.580 40.000 0.00 0.00 0.00 2.10
6957 12388 4.222588 ACAAAGCAGCTCATCTCTACTCTT 59.777 41.667 0.00 0.00 0.00 2.85
6958 12389 3.768757 ACAAAGCAGCTCATCTCTACTCT 59.231 43.478 0.00 0.00 0.00 3.24
6959 12390 3.864583 CACAAAGCAGCTCATCTCTACTC 59.135 47.826 0.00 0.00 0.00 2.59
6960 12391 3.369261 CCACAAAGCAGCTCATCTCTACT 60.369 47.826 0.00 0.00 0.00 2.57
6961 12392 2.935201 CCACAAAGCAGCTCATCTCTAC 59.065 50.000 0.00 0.00 0.00 2.59
6962 12393 2.568956 ACCACAAAGCAGCTCATCTCTA 59.431 45.455 0.00 0.00 0.00 2.43
6963 12394 1.350351 ACCACAAAGCAGCTCATCTCT 59.650 47.619 0.00 0.00 0.00 3.10
6964 12395 1.818642 ACCACAAAGCAGCTCATCTC 58.181 50.000 0.00 0.00 0.00 2.75
6965 12396 3.423539 TTACCACAAAGCAGCTCATCT 57.576 42.857 0.00 0.00 0.00 2.90
6966 12397 5.528690 TCATATTACCACAAAGCAGCTCATC 59.471 40.000 0.00 0.00 0.00 2.92
6967 12398 5.439721 TCATATTACCACAAAGCAGCTCAT 58.560 37.500 0.00 0.00 0.00 2.90
7016 12447 4.202503 TGAAGGATGGATGCCTATTCTTCC 60.203 45.833 7.17 0.00 36.70 3.46
7017 12448 4.978099 TGAAGGATGGATGCCTATTCTTC 58.022 43.478 0.00 0.00 33.76 2.87
7018 12449 4.662179 TCTGAAGGATGGATGCCTATTCTT 59.338 41.667 0.00 0.00 33.76 2.52
7176 13990 5.642491 GGGTTTCCTACACTGTTATGTTCTC 59.358 44.000 0.00 0.00 33.85 2.87
7210 14028 2.354805 GGCAGTGGAGGATTTAAGACGT 60.355 50.000 0.00 0.00 0.00 4.34
7240 14058 5.181009 TGCTGACATATTTCTTGGAGACTG 58.819 41.667 0.00 0.00 0.00 3.51
7323 14142 6.995686 TGGCAGTAGAACAGATTGTTTTCTTA 59.004 34.615 0.00 0.00 41.28 2.10
7352 14171 5.731126 GCGTAGAGGTAGAAGACTGACATTC 60.731 48.000 0.00 0.00 0.00 2.67
7386 14212 0.317436 TTTGCAAACATGTCCGTCGC 60.317 50.000 8.05 0.00 0.00 5.19
7390 14216 6.702972 TTGATTTATTTGCAAACATGTCCG 57.297 33.333 15.41 0.00 0.00 4.79
7435 14855 0.954452 CTGTTCAGCGGGCTCTTTTT 59.046 50.000 0.00 0.00 0.00 1.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.