Multiple sequence alignment - TraesCS3D01G450900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G450900 chr3D 100.000 8125 0 0 1 8125 559085432 559077308 0.000000e+00 15005
1 TraesCS3D01G450900 chr3D 99.219 768 5 1 1 767 559090885 559090118 0.000000e+00 1384
2 TraesCS3D01G450900 chr3D 97.798 772 14 3 1 769 557476508 557475737 0.000000e+00 1328
3 TraesCS3D01G450900 chr3D 97.680 776 11 3 1 769 437757389 437756614 0.000000e+00 1327
4 TraesCS3D01G450900 chr3D 97.552 776 11 3 1 768 515549736 515550511 0.000000e+00 1321
5 TraesCS3D01G450900 chr3D 98.382 309 5 0 4354 4662 44673644 44673336 1.990000e-150 544
6 TraesCS3D01G450900 chr3D 80.000 300 35 6 6169 6468 42793155 42793429 1.790000e-46 198
7 TraesCS3D01G450900 chr3D 78.378 296 50 6 6169 6463 605314172 605313890 6.480000e-41 180
8 TraesCS3D01G450900 chr3D 96.970 66 1 1 774 839 605457227 605457291 8.620000e-20 110
9 TraesCS3D01G450900 chr3A 94.029 3500 132 46 4660 8125 695504742 695501286 0.000000e+00 5234
10 TraesCS3D01G450900 chr3A 93.661 3234 141 35 1161 4358 695507944 695504739 0.000000e+00 4778
11 TraesCS3D01G450900 chr3A 92.767 318 16 7 840 1153 695508632 695508318 3.460000e-123 453
12 TraesCS3D01G450900 chr3A 81.373 306 40 6 6169 6468 40296391 40296685 4.900000e-57 233
13 TraesCS3D01G450900 chr3B 94.983 2352 88 10 2010 4358 741868574 741866250 0.000000e+00 3663
14 TraesCS3D01G450900 chr3B 92.670 2401 110 30 4934 7297 741865851 741863480 0.000000e+00 3398
15 TraesCS3D01G450900 chr3B 89.241 1199 77 28 840 2008 741869877 741868701 0.000000e+00 1452
16 TraesCS3D01G450900 chr3B 93.125 800 33 9 7334 8125 741863293 741862508 0.000000e+00 1153
17 TraesCS3D01G450900 chr3B 94.624 279 12 1 4660 4935 741866253 741865975 5.830000e-116 429
18 TraesCS3D01G450900 chr5D 98.179 769 12 2 1 767 73406703 73405935 0.000000e+00 1341
19 TraesCS3D01G450900 chr5D 99.023 307 3 0 4355 4661 44832354 44832660 1.190000e-152 551
20 TraesCS3D01G450900 chr4B 97.804 774 10 3 1 767 24924188 24924961 0.000000e+00 1328
21 TraesCS3D01G450900 chrUn 97.659 769 16 2 1 767 175491965 175491197 0.000000e+00 1319
22 TraesCS3D01G450900 chrUn 91.358 243 20 1 5908 6150 76565644 76565885 1.690000e-86 331
23 TraesCS3D01G450900 chr6A 97.659 769 15 3 1 767 15338987 15338220 0.000000e+00 1317
24 TraesCS3D01G450900 chr6A 92.105 76 4 2 6170 6243 2053678 2053603 1.120000e-18 106
25 TraesCS3D01G450900 chr6D 97.542 773 12 2 1 766 390239351 390238579 0.000000e+00 1315
26 TraesCS3D01G450900 chr1D 99.355 310 2 0 4355 4664 390369465 390369156 5.510000e-156 562
27 TraesCS3D01G450900 chr1D 98.722 313 3 1 4352 4664 361490735 361490424 9.210000e-154 555
28 TraesCS3D01G450900 chr7D 99.353 309 2 0 4354 4662 632095850 632095542 1.980000e-155 560
29 TraesCS3D01G450900 chr7D 97.742 310 7 0 4355 4664 519146915 519147224 1.200000e-147 534
30 TraesCS3D01G450900 chr7D 92.531 241 17 1 5907 6146 149469089 149469329 2.170000e-90 344
31 TraesCS3D01G450900 chr7D 93.056 72 5 0 6468 6539 149469333 149469404 1.120000e-18 106
32 TraesCS3D01G450900 chr2D 98.697 307 4 0 4355 4661 474791836 474792142 5.540000e-151 545
33 TraesCS3D01G450900 chr2D 97.188 320 8 1 4355 4673 69240012 69239693 2.580000e-149 540
34 TraesCS3D01G450900 chr2D 78.716 296 49 6 6169 6463 568191493 568191775 1.390000e-42 185
35 TraesCS3D01G450900 chr4D 97.727 308 7 0 4355 4662 52095369 52095062 1.550000e-146 531
36 TraesCS3D01G450900 chr4D 93.416 243 15 1 5908 6150 477330973 477331214 7.750000e-95 359
37 TraesCS3D01G450900 chr4D 91.770 243 20 0 5908 6150 483080825 483081067 1.010000e-88 339
38 TraesCS3D01G450900 chr4A 92.562 242 18 0 5907 6148 716571266 716571507 1.680000e-91 348
39 TraesCS3D01G450900 chr6B 91.803 244 20 0 5907 6150 32623835 32623592 2.810000e-89 340
40 TraesCS3D01G450900 chr6B 91.358 243 20 1 5908 6150 42117553 42117312 1.690000e-86 331
41 TraesCS3D01G450900 chr6B 81.250 304 40 5 6169 6468 632561276 632561566 6.340000e-56 230
42 TraesCS3D01G450900 chr2A 79.392 296 46 8 6169 6463 691606561 691606842 2.310000e-45 195
43 TraesCS3D01G450900 chr7A 77.365 296 49 10 6169 6463 10285473 10285195 8.440000e-35 159
44 TraesCS3D01G450900 chr5A 96.970 66 2 0 774 839 472249163 472249098 2.400000e-20 111
45 TraesCS3D01G450900 chr1B 94.203 69 3 1 769 837 431055617 431055684 4.010000e-18 104


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G450900 chr3D 559077308 559085432 8124 True 15005.000000 15005 100.000000 1 8125 1 chr3D.!!$R4 8124
1 TraesCS3D01G450900 chr3D 559090118 559090885 767 True 1384.000000 1384 99.219000 1 767 1 chr3D.!!$R5 766
2 TraesCS3D01G450900 chr3D 557475737 557476508 771 True 1328.000000 1328 97.798000 1 769 1 chr3D.!!$R3 768
3 TraesCS3D01G450900 chr3D 437756614 437757389 775 True 1327.000000 1327 97.680000 1 769 1 chr3D.!!$R2 768
4 TraesCS3D01G450900 chr3D 515549736 515550511 775 False 1321.000000 1321 97.552000 1 768 1 chr3D.!!$F2 767
5 TraesCS3D01G450900 chr3A 695501286 695508632 7346 True 3488.333333 5234 93.485667 840 8125 3 chr3A.!!$R1 7285
6 TraesCS3D01G450900 chr3B 741862508 741869877 7369 True 2019.000000 3663 92.928600 840 8125 5 chr3B.!!$R1 7285
7 TraesCS3D01G450900 chr5D 73405935 73406703 768 True 1341.000000 1341 98.179000 1 767 1 chr5D.!!$R1 766
8 TraesCS3D01G450900 chr4B 24924188 24924961 773 False 1328.000000 1328 97.804000 1 767 1 chr4B.!!$F1 766
9 TraesCS3D01G450900 chrUn 175491197 175491965 768 True 1319.000000 1319 97.659000 1 767 1 chrUn.!!$R1 766
10 TraesCS3D01G450900 chr6A 15338220 15338987 767 True 1317.000000 1317 97.659000 1 767 1 chr6A.!!$R2 766
11 TraesCS3D01G450900 chr6D 390238579 390239351 772 True 1315.000000 1315 97.542000 1 766 1 chr6D.!!$R1 765

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
819 830 0.883833 GCCTTGCTGCTCTGCTAAAA 59.116 50.0 0.00 0.00 0.00 1.52 F
1441 1827 0.387878 GTGTGACTGAGGAGTGCTCG 60.388 60.0 7.20 4.74 30.16 5.03 F
2515 3040 0.169672 CTTGTGGATCGCAGGCTTTG 59.830 55.0 0.00 0.00 0.00 2.77 F
2631 3156 1.873270 ATGTGTCAGCGCTGTACGGA 61.873 55.0 34.70 19.84 43.93 4.69 F
4210 4747 1.186200 AGCGACTGGAATCTGTAGCA 58.814 50.0 12.05 0.00 42.58 3.49 F
4870 5417 0.040425 GTTGTAGCGTGCCCAACTTG 60.040 55.0 14.28 0.00 36.43 3.16 F
5222 5898 1.139498 TCCTGGGGGAATGCAGACAA 61.139 55.0 0.00 0.00 38.93 3.18 F
5818 6503 0.470341 AAAAGCTATCTCCCCTCCGC 59.530 55.0 0.00 0.00 0.00 5.54 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1842 2238 0.249911 GCCCCGAACTATAGCACCAG 60.250 60.000 0.00 0.00 0.00 4.00 R
2826 3351 0.322906 CCCAGGCTTCCTTGACCTTC 60.323 60.000 0.00 0.00 0.00 3.46 R
3959 4489 0.321475 TGATGGCATGCGACAGTTCA 60.321 50.000 12.44 5.59 29.39 3.18 R
4415 4959 1.274167 TGCCTCGGTTACTGTTAGTGG 59.726 52.381 0.00 0.00 0.00 4.00 R
5146 5822 0.251564 TGCCATCAATGAACCCGGTT 60.252 50.000 1.22 1.22 0.00 4.44 R
5713 6391 1.001487 TGCTTTCTTTGTCATGCACGG 60.001 47.619 0.00 0.00 0.00 4.94 R
6306 6993 1.132689 ACAGAAGGGTCTTCTCCAGGT 60.133 52.381 7.16 0.96 28.78 4.00 R
7321 8028 0.597568 CCGTGCAATCAAAGCCTCAA 59.402 50.000 0.00 0.00 0.00 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
701 712 4.248058 AGTTTGCTAGATTTTTGCATGCC 58.752 39.130 16.68 0.00 36.55 4.40
703 714 3.957591 TGCTAGATTTTTGCATGCCAA 57.042 38.095 16.68 7.85 0.00 4.52
769 780 7.121168 TGAACTTGCCTAATATTCCAACAAGAG 59.879 37.037 19.24 0.73 37.17 2.85
770 781 6.485171 ACTTGCCTAATATTCCAACAAGAGT 58.515 36.000 19.24 4.44 37.17 3.24
771 782 6.948309 ACTTGCCTAATATTCCAACAAGAGTT 59.052 34.615 19.24 3.51 37.17 3.01
772 783 8.107095 ACTTGCCTAATATTCCAACAAGAGTTA 58.893 33.333 19.24 0.00 37.17 2.24
773 784 7.859325 TGCCTAATATTCCAACAAGAGTTAC 57.141 36.000 0.00 0.00 35.85 2.50
774 785 7.398829 TGCCTAATATTCCAACAAGAGTTACA 58.601 34.615 0.00 0.00 35.85 2.41
775 786 7.335924 TGCCTAATATTCCAACAAGAGTTACAC 59.664 37.037 0.00 0.00 35.85 2.90
776 787 7.465513 GCCTAATATTCCAACAAGAGTTACACG 60.466 40.741 0.00 0.00 35.85 4.49
777 788 7.762615 CCTAATATTCCAACAAGAGTTACACGA 59.237 37.037 0.00 0.00 35.85 4.35
778 789 7.972832 AATATTCCAACAAGAGTTACACGAA 57.027 32.000 0.00 0.00 35.85 3.85
779 790 7.972832 ATATTCCAACAAGAGTTACACGAAA 57.027 32.000 0.00 0.00 35.85 3.46
780 791 5.728351 TTCCAACAAGAGTTACACGAAAG 57.272 39.130 0.00 0.00 35.85 2.62
781 792 4.124238 TCCAACAAGAGTTACACGAAAGG 58.876 43.478 0.00 0.00 35.85 3.11
782 793 3.303791 CCAACAAGAGTTACACGAAAGGC 60.304 47.826 0.00 0.00 35.85 4.35
783 794 3.470645 ACAAGAGTTACACGAAAGGCT 57.529 42.857 0.00 0.00 0.00 4.58
784 795 3.391049 ACAAGAGTTACACGAAAGGCTC 58.609 45.455 0.00 0.00 0.00 4.70
785 796 5.554477 AACAAGAGTTACACGAAAGGCTCG 61.554 45.833 0.00 0.00 44.28 5.03
792 803 3.403277 CGAAAGGCTCGCATCTGG 58.597 61.111 0.00 0.00 41.49 3.86
793 804 2.817423 CGAAAGGCTCGCATCTGGC 61.817 63.158 0.00 0.00 41.49 4.85
794 805 1.451028 GAAAGGCTCGCATCTGGCT 60.451 57.895 0.00 0.00 41.67 4.75
795 806 1.435408 GAAAGGCTCGCATCTGGCTC 61.435 60.000 0.00 0.00 41.67 4.70
796 807 1.908340 AAAGGCTCGCATCTGGCTCT 61.908 55.000 0.00 0.00 41.67 4.09
797 808 2.280052 GGCTCGCATCTGGCTCTC 60.280 66.667 0.00 0.00 41.67 3.20
798 809 2.280052 GCTCGCATCTGGCTCTCC 60.280 66.667 0.00 0.00 41.67 3.71
799 810 2.027314 CTCGCATCTGGCTCTCCG 59.973 66.667 0.00 0.00 41.67 4.63
800 811 3.496875 CTCGCATCTGGCTCTCCGG 62.497 68.421 0.00 0.00 41.67 5.14
810 821 4.093291 CTCTCCGGCCTTGCTGCT 62.093 66.667 0.00 0.00 32.89 4.24
811 822 4.087892 TCTCCGGCCTTGCTGCTC 62.088 66.667 0.00 0.00 32.89 4.26
812 823 4.093291 CTCCGGCCTTGCTGCTCT 62.093 66.667 0.00 0.00 32.89 4.09
813 824 4.399395 TCCGGCCTTGCTGCTCTG 62.399 66.667 0.00 0.00 32.89 3.35
816 827 2.270205 GGCCTTGCTGCTCTGCTA 59.730 61.111 0.00 0.00 0.00 3.49
817 828 1.377725 GGCCTTGCTGCTCTGCTAA 60.378 57.895 0.00 0.00 0.00 3.09
818 829 0.962356 GGCCTTGCTGCTCTGCTAAA 60.962 55.000 0.00 0.00 0.00 1.85
819 830 0.883833 GCCTTGCTGCTCTGCTAAAA 59.116 50.000 0.00 0.00 0.00 1.52
820 831 1.475682 GCCTTGCTGCTCTGCTAAAAT 59.524 47.619 0.00 0.00 0.00 1.82
821 832 2.734492 GCCTTGCTGCTCTGCTAAAATG 60.734 50.000 0.00 0.00 0.00 2.32
822 833 2.490903 CCTTGCTGCTCTGCTAAAATGT 59.509 45.455 0.00 0.00 0.00 2.71
823 834 3.057033 CCTTGCTGCTCTGCTAAAATGTT 60.057 43.478 0.00 0.00 0.00 2.71
824 835 3.837213 TGCTGCTCTGCTAAAATGTTC 57.163 42.857 0.00 0.00 0.00 3.18
825 836 3.148412 TGCTGCTCTGCTAAAATGTTCA 58.852 40.909 0.00 0.00 0.00 3.18
826 837 3.058016 TGCTGCTCTGCTAAAATGTTCAC 60.058 43.478 0.00 0.00 0.00 3.18
827 838 3.058016 GCTGCTCTGCTAAAATGTTCACA 60.058 43.478 0.00 0.00 0.00 3.58
828 839 4.380233 GCTGCTCTGCTAAAATGTTCACAT 60.380 41.667 0.00 0.00 38.41 3.21
829 840 5.050644 TGCTCTGCTAAAATGTTCACATG 57.949 39.130 0.00 0.00 36.56 3.21
830 841 3.855950 GCTCTGCTAAAATGTTCACATGC 59.144 43.478 0.00 0.00 36.56 4.06
831 842 4.616604 GCTCTGCTAAAATGTTCACATGCA 60.617 41.667 0.00 0.00 36.56 3.96
832 843 5.647589 CTCTGCTAAAATGTTCACATGCAT 58.352 37.500 0.00 0.00 36.56 3.96
833 844 6.678655 GCTCTGCTAAAATGTTCACATGCATA 60.679 38.462 0.00 0.00 36.56 3.14
834 845 7.337480 TCTGCTAAAATGTTCACATGCATAT 57.663 32.000 0.00 0.00 36.56 1.78
835 846 8.449251 TCTGCTAAAATGTTCACATGCATATA 57.551 30.769 0.00 0.00 36.56 0.86
836 847 8.901793 TCTGCTAAAATGTTCACATGCATATAA 58.098 29.630 0.00 0.00 36.56 0.98
837 848 9.518906 CTGCTAAAATGTTCACATGCATATAAA 57.481 29.630 0.00 0.00 36.56 1.40
838 849 9.518906 TGCTAAAATGTTCACATGCATATAAAG 57.481 29.630 0.00 0.00 36.56 1.85
937 948 3.108289 CAGAGCGCAGTGACACCG 61.108 66.667 11.47 0.63 0.00 4.94
943 954 4.626081 GCAGTGACACCGTGGCCT 62.626 66.667 3.32 0.00 0.00 5.19
945 956 3.941188 AGTGACACCGTGGCCTGG 61.941 66.667 12.48 12.48 0.00 4.45
993 1005 2.126071 GTGTCGCCGCTAAGCAGA 60.126 61.111 0.00 0.00 0.00 4.26
1125 1137 3.157949 GCCGCTAGCTCCTCCCTT 61.158 66.667 13.93 0.00 38.99 3.95
1165 1543 2.765807 CCGCCATGTCCTCCTCCT 60.766 66.667 0.00 0.00 0.00 3.69
1257 1635 2.047274 CACAACCCGGTGAGCGAT 60.047 61.111 5.27 0.00 41.32 4.58
1441 1827 0.387878 GTGTGACTGAGGAGTGCTCG 60.388 60.000 7.20 4.74 30.16 5.03
1448 1834 1.315981 TGAGGAGTGCTCGGCTACAG 61.316 60.000 7.20 0.00 0.00 2.74
1524 1917 2.744202 AGCTAGCCGAGACAAATGTTTG 59.256 45.455 12.13 4.04 43.62 2.93
1534 1928 4.122046 AGACAAATGTTTGCTTGCCTTTC 58.878 39.130 5.44 0.00 41.79 2.62
1558 1954 3.950395 CTCTCCAGTGGATTTTGGATTCC 59.050 47.826 13.56 0.00 42.32 3.01
1576 1972 4.942761 TTCCGTGGATTATAGGTACCAC 57.057 45.455 15.94 0.00 46.16 4.16
1736 2132 7.108841 ACTCTAGTGCTTCATTTAATACCGA 57.891 36.000 0.00 0.00 0.00 4.69
1794 2190 1.899814 TGCGTAGTGGACTGATTCCTT 59.100 47.619 0.00 0.00 46.10 3.36
1842 2238 6.494893 TGTGTTAGATCAATTACCAACTGC 57.505 37.500 0.00 0.00 0.00 4.40
1898 2294 4.440112 CCAATCCGGCTCTGTAAAATTTCC 60.440 45.833 0.00 0.00 0.00 3.13
1902 2298 4.770010 TCCGGCTCTGTAAAATTTCCAATT 59.230 37.500 0.00 0.00 0.00 2.32
1943 2339 3.243401 GGGTGTTGCCAAGTTCAAACTAG 60.243 47.826 0.00 0.00 38.57 2.57
1955 2351 7.277539 CCAAGTTCAAACTAGAGCTAGATTCAG 59.722 40.741 11.28 0.00 38.57 3.02
1964 2360 7.199766 ACTAGAGCTAGATTCAGTCAAATTCG 58.800 38.462 11.28 0.00 36.97 3.34
1968 2364 7.067615 AGAGCTAGATTCAGTCAAATTCGTCTA 59.932 37.037 0.00 0.00 0.00 2.59
1977 2373 9.825972 TTCAGTCAAATTCGTCTATTTCATTTC 57.174 29.630 0.00 0.00 0.00 2.17
1981 2377 9.055248 GTCAAATTCGTCTATTTCATTTCAGTG 57.945 33.333 0.00 0.00 0.00 3.66
1982 2378 8.236586 TCAAATTCGTCTATTTCATTTCAGTGG 58.763 33.333 0.00 0.00 0.00 4.00
1985 2381 7.921786 TTCGTCTATTTCATTTCAGTGGAAT 57.078 32.000 0.00 0.00 32.22 3.01
1986 2382 7.539712 TCGTCTATTTCATTTCAGTGGAATC 57.460 36.000 0.00 0.00 30.15 2.52
1987 2383 6.538742 TCGTCTATTTCATTTCAGTGGAATCC 59.461 38.462 0.00 0.00 30.15 3.01
1989 2385 7.148255 CGTCTATTTCATTTCAGTGGAATCCAA 60.148 37.037 2.31 0.00 34.18 3.53
1994 2392 6.729690 TCATTTCAGTGGAATCCAAACTTT 57.270 33.333 2.31 0.00 34.18 2.66
2002 2400 5.422012 AGTGGAATCCAAACTTTTGACTTGT 59.578 36.000 2.31 0.00 40.55 3.16
2008 2531 8.871686 AATCCAAACTTTTGACTTGTGTAATC 57.128 30.769 3.17 0.00 40.55 1.75
2013 2536 8.930760 CAAACTTTTGACTTGTGTAATCCAAAA 58.069 29.630 0.00 0.00 40.55 2.44
2126 2651 4.569943 TGGTGAGTTGTCTTTAGCATCTC 58.430 43.478 0.00 0.00 34.81 2.75
2133 2658 5.047660 AGTTGTCTTTAGCATCTCTCGTTCT 60.048 40.000 0.00 0.00 0.00 3.01
2134 2659 5.392767 TGTCTTTAGCATCTCTCGTTCTT 57.607 39.130 0.00 0.00 0.00 2.52
2135 2660 5.784177 TGTCTTTAGCATCTCTCGTTCTTT 58.216 37.500 0.00 0.00 0.00 2.52
2136 2661 5.635280 TGTCTTTAGCATCTCTCGTTCTTTG 59.365 40.000 0.00 0.00 0.00 2.77
2453 2978 2.084546 GGCCAGATGTTGACAAGGTAC 58.915 52.381 0.00 0.00 0.00 3.34
2458 2983 3.681897 CAGATGTTGACAAGGTACTCTGC 59.318 47.826 0.00 0.00 38.49 4.26
2515 3040 0.169672 CTTGTGGATCGCAGGCTTTG 59.830 55.000 0.00 0.00 0.00 2.77
2529 3054 4.437255 GCAGGCTTTGTTTTCCTGTTTTTG 60.437 41.667 8.99 0.00 46.82 2.44
2548 3073 8.085296 TGTTTTTGTATTGTCACACTTTTGAGT 58.915 29.630 0.00 0.00 0.00 3.41
2550 3075 6.993786 TTGTATTGTCACACTTTTGAGTGA 57.006 33.333 13.02 0.00 45.28 3.41
2631 3156 1.873270 ATGTGTCAGCGCTGTACGGA 61.873 55.000 34.70 19.84 43.93 4.69
2782 3307 8.950210 TCAAATACCTCATTTCTGAAGTTGATC 58.050 33.333 5.83 0.00 34.49 2.92
2783 3308 8.733458 CAAATACCTCATTTCTGAAGTTGATCA 58.267 33.333 0.00 0.00 34.49 2.92
2796 3321 8.262933 TCTGAAGTTGATCACTCATACATGATT 58.737 33.333 0.00 0.00 35.67 2.57
2805 3330 7.368480 TCACTCATACATGATTTGACAGTTG 57.632 36.000 0.00 0.00 36.02 3.16
2826 3351 4.825422 TGTGCTCATAACTTCTCTTCAGG 58.175 43.478 0.00 0.00 0.00 3.86
2862 3387 3.181465 CCTGGGATACTAAACGTGATGCT 60.181 47.826 0.00 0.00 0.00 3.79
2927 3452 3.633986 GCATTATCTGCCAAGGCTAACTT 59.366 43.478 12.96 0.00 45.66 2.66
3089 3614 6.595326 TGAACTGATTGCTCGATTGAGTTAAT 59.405 34.615 11.71 11.83 44.48 1.40
3153 3678 7.254795 CGTATCCTGGTTCCTGATTTATTTCAC 60.255 40.741 0.00 0.00 0.00 3.18
3187 3713 5.246307 GGCACTAAACATCCTTAACTCAGT 58.754 41.667 0.00 0.00 0.00 3.41
3236 3762 6.270000 TCAGGATCTCACTTACCTTTTTCAGA 59.730 38.462 0.00 0.00 0.00 3.27
3238 3764 7.609532 CAGGATCTCACTTACCTTTTTCAGATT 59.390 37.037 0.00 0.00 0.00 2.40
3277 3803 9.847224 AACTAGCTAGCTTATTTGCCTTAATAA 57.153 29.630 24.88 0.00 0.00 1.40
3363 3889 1.911057 CTCCCAAGTTTCCAAGACCC 58.089 55.000 0.00 0.00 0.00 4.46
3528 4054 7.390027 GTGGCTTTCATAGATATAGTGTGGAT 58.610 38.462 0.00 0.00 0.00 3.41
3557 4083 5.619981 GCTGGCATGGTAAGTTCACTTTAAG 60.620 44.000 0.00 0.00 37.40 1.85
3601 4129 6.595326 TCACGTATTTGCAGAATTCATCTCTT 59.405 34.615 8.44 0.00 35.73 2.85
3762 4292 3.199508 ACTTGAGGAGAGACATGATTGGG 59.800 47.826 0.00 0.00 0.00 4.12
3823 4353 2.615912 GCAGAATATGAAGGTGCTCCAC 59.384 50.000 7.70 1.48 35.89 4.02
3871 4401 3.997021 GTGGACAAGTCAAGAGGTACATG 59.003 47.826 2.29 0.00 0.00 3.21
3959 4489 8.258007 GCTCCTTATAAAATGGCCTTTAAGTTT 58.742 33.333 3.32 0.00 0.00 2.66
3972 4502 4.911610 CCTTTAAGTTTGAACTGTCGCATG 59.088 41.667 0.00 0.00 39.66 4.06
4039 4576 5.677319 AGCCACTTTATACACTCTTGCTA 57.323 39.130 0.00 0.00 0.00 3.49
4117 4654 7.440198 TCAGCTAGATGATAATCCAAGTTGAG 58.560 38.462 6.59 0.00 0.00 3.02
4201 4738 3.704566 AGTCATACCATTAGCGACTGGAA 59.295 43.478 10.20 0.00 35.67 3.53
4210 4747 1.186200 AGCGACTGGAATCTGTAGCA 58.814 50.000 12.05 0.00 42.58 3.49
4245 4782 4.868314 ATACATACCGGCTCTAAAGACC 57.132 45.455 0.00 0.00 0.00 3.85
4334 4878 4.564041 CCTACTTGGTGCTATCTGCTATG 58.436 47.826 0.00 0.00 43.37 2.23
4335 4879 2.843701 ACTTGGTGCTATCTGCTATGC 58.156 47.619 0.00 0.00 43.37 3.14
4336 4880 2.171237 ACTTGGTGCTATCTGCTATGCA 59.829 45.455 0.00 0.00 43.37 3.96
4360 4904 8.994170 GCAGAATTATTGAATAGTTCTACTCCC 58.006 37.037 18.58 5.90 39.05 4.30
4363 4907 9.713713 GAATTATTGAATAGTTCTACTCCCTCC 57.286 37.037 11.71 0.00 31.19 4.30
4364 4908 8.798975 ATTATTGAATAGTTCTACTCCCTCCA 57.201 34.615 0.00 0.00 0.00 3.86
4365 4909 8.798975 TTATTGAATAGTTCTACTCCCTCCAT 57.201 34.615 0.00 0.00 0.00 3.41
4366 4910 7.698163 ATTGAATAGTTCTACTCCCTCCATT 57.302 36.000 0.00 0.00 0.00 3.16
4367 4911 6.732896 TGAATAGTTCTACTCCCTCCATTC 57.267 41.667 0.00 0.00 0.00 2.67
4368 4912 5.602978 TGAATAGTTCTACTCCCTCCATTCC 59.397 44.000 0.00 0.00 0.00 3.01
4369 4913 2.765502 AGTTCTACTCCCTCCATTCCC 58.234 52.381 0.00 0.00 0.00 3.97
4370 4914 2.319438 AGTTCTACTCCCTCCATTCCCT 59.681 50.000 0.00 0.00 0.00 4.20
4371 4915 3.116174 GTTCTACTCCCTCCATTCCCTT 58.884 50.000 0.00 0.00 0.00 3.95
4372 4916 4.015541 AGTTCTACTCCCTCCATTCCCTTA 60.016 45.833 0.00 0.00 0.00 2.69
4373 4917 4.852991 TCTACTCCCTCCATTCCCTTAT 57.147 45.455 0.00 0.00 0.00 1.73
4374 4918 5.961399 TCTACTCCCTCCATTCCCTTATA 57.039 43.478 0.00 0.00 0.00 0.98
4375 4919 5.652324 TCTACTCCCTCCATTCCCTTATAC 58.348 45.833 0.00 0.00 0.00 1.47
4376 4920 4.295905 ACTCCCTCCATTCCCTTATACA 57.704 45.455 0.00 0.00 0.00 2.29
4377 4921 4.641868 ACTCCCTCCATTCCCTTATACAA 58.358 43.478 0.00 0.00 0.00 2.41
4378 4922 4.660771 ACTCCCTCCATTCCCTTATACAAG 59.339 45.833 0.00 0.00 0.00 3.16
4392 4936 7.639113 CCTTATACAAGGCCACTATGAAAAA 57.361 36.000 5.01 0.00 44.90 1.94
4393 4937 8.237811 CCTTATACAAGGCCACTATGAAAAAT 57.762 34.615 5.01 0.00 44.90 1.82
4394 4938 9.349713 CCTTATACAAGGCCACTATGAAAAATA 57.650 33.333 5.01 0.00 44.90 1.40
4396 4940 9.688091 TTATACAAGGCCACTATGAAAAATACA 57.312 29.630 5.01 0.00 0.00 2.29
4397 4941 8.766994 ATACAAGGCCACTATGAAAAATACAT 57.233 30.769 5.01 0.00 0.00 2.29
4398 4942 7.480760 ACAAGGCCACTATGAAAAATACATT 57.519 32.000 5.01 0.00 0.00 2.71
4399 4943 7.906327 ACAAGGCCACTATGAAAAATACATTT 58.094 30.769 5.01 0.00 0.00 2.32
4400 4944 8.374743 ACAAGGCCACTATGAAAAATACATTTT 58.625 29.630 5.01 0.00 43.85 1.82
4401 4945 8.658609 CAAGGCCACTATGAAAAATACATTTTG 58.341 33.333 5.01 0.00 41.27 2.44
4402 4946 6.818142 AGGCCACTATGAAAAATACATTTTGC 59.182 34.615 5.01 0.03 41.27 3.68
4403 4947 6.593382 GGCCACTATGAAAAATACATTTTGCA 59.407 34.615 9.91 9.91 46.26 4.08
4415 4959 9.533253 AAAATACATTTTGCATCTATACAAGGC 57.467 29.630 0.00 0.00 38.46 4.35
4416 4960 5.520376 ACATTTTGCATCTATACAAGGCC 57.480 39.130 0.00 0.00 0.00 5.19
4417 4961 4.955450 ACATTTTGCATCTATACAAGGCCA 59.045 37.500 5.01 0.00 0.00 5.36
4418 4962 4.981806 TTTTGCATCTATACAAGGCCAC 57.018 40.909 5.01 0.00 0.00 5.01
4419 4963 3.931907 TTGCATCTATACAAGGCCACT 57.068 42.857 5.01 0.00 0.00 4.00
4420 4964 5.366482 TTTGCATCTATACAAGGCCACTA 57.634 39.130 5.01 0.00 0.00 2.74
4421 4965 5.366482 TTGCATCTATACAAGGCCACTAA 57.634 39.130 5.01 0.00 0.00 2.24
4422 4966 4.703897 TGCATCTATACAAGGCCACTAAC 58.296 43.478 5.01 0.00 0.00 2.34
4423 4967 4.163268 TGCATCTATACAAGGCCACTAACA 59.837 41.667 5.01 0.00 0.00 2.41
4424 4968 4.752101 GCATCTATACAAGGCCACTAACAG 59.248 45.833 5.01 0.00 0.00 3.16
4425 4969 5.685075 GCATCTATACAAGGCCACTAACAGT 60.685 44.000 5.01 0.00 0.00 3.55
4426 4970 6.462487 GCATCTATACAAGGCCACTAACAGTA 60.462 42.308 5.01 0.00 0.00 2.74
4427 4971 7.497595 CATCTATACAAGGCCACTAACAGTAA 58.502 38.462 5.01 0.00 0.00 2.24
4428 4972 6.870769 TCTATACAAGGCCACTAACAGTAAC 58.129 40.000 5.01 0.00 0.00 2.50
4429 4973 3.136009 ACAAGGCCACTAACAGTAACC 57.864 47.619 5.01 0.00 0.00 2.85
4430 4974 2.073816 CAAGGCCACTAACAGTAACCG 58.926 52.381 5.01 0.00 30.17 4.44
4431 4975 1.636148 AGGCCACTAACAGTAACCGA 58.364 50.000 5.01 0.00 30.17 4.69
4432 4976 1.549170 AGGCCACTAACAGTAACCGAG 59.451 52.381 5.01 0.00 30.17 4.63
4433 4977 1.405121 GGCCACTAACAGTAACCGAGG 60.405 57.143 0.00 0.00 0.00 4.63
4434 4978 2.005560 GCCACTAACAGTAACCGAGGC 61.006 57.143 0.00 0.00 0.00 4.70
4435 4979 1.274167 CCACTAACAGTAACCGAGGCA 59.726 52.381 0.00 0.00 0.00 4.75
4436 4980 2.289195 CCACTAACAGTAACCGAGGCAA 60.289 50.000 0.00 0.00 0.00 4.52
4437 4981 3.395639 CACTAACAGTAACCGAGGCAAA 58.604 45.455 0.00 0.00 0.00 3.68
4438 4982 3.810941 CACTAACAGTAACCGAGGCAAAA 59.189 43.478 0.00 0.00 0.00 2.44
4439 4983 4.454504 CACTAACAGTAACCGAGGCAAAAT 59.545 41.667 0.00 0.00 0.00 1.82
4440 4984 5.048991 CACTAACAGTAACCGAGGCAAAATT 60.049 40.000 0.00 0.00 0.00 1.82
4441 4985 4.929819 AACAGTAACCGAGGCAAAATTT 57.070 36.364 0.00 0.00 0.00 1.82
4442 4986 6.711645 ACTAACAGTAACCGAGGCAAAATTTA 59.288 34.615 0.00 0.00 0.00 1.40
4443 4987 6.394025 AACAGTAACCGAGGCAAAATTTAA 57.606 33.333 0.00 0.00 0.00 1.52
4444 4988 6.584185 ACAGTAACCGAGGCAAAATTTAAT 57.416 33.333 0.00 0.00 0.00 1.40
4445 4989 6.386654 ACAGTAACCGAGGCAAAATTTAATG 58.613 36.000 0.00 0.00 0.00 1.90
4446 4990 6.207810 ACAGTAACCGAGGCAAAATTTAATGA 59.792 34.615 0.00 0.00 0.00 2.57
4447 4991 7.093945 ACAGTAACCGAGGCAAAATTTAATGAT 60.094 33.333 0.00 0.00 0.00 2.45
4448 4992 7.220683 CAGTAACCGAGGCAAAATTTAATGATG 59.779 37.037 0.00 0.00 0.00 3.07
4449 4993 5.659440 ACCGAGGCAAAATTTAATGATGT 57.341 34.783 0.00 0.00 0.00 3.06
4450 4994 6.036577 ACCGAGGCAAAATTTAATGATGTT 57.963 33.333 0.00 0.00 0.00 2.71
4451 4995 6.463360 ACCGAGGCAAAATTTAATGATGTTT 58.537 32.000 0.00 0.00 0.00 2.83
4452 4996 6.934083 ACCGAGGCAAAATTTAATGATGTTTT 59.066 30.769 0.00 0.00 0.00 2.43
4453 4997 7.117667 ACCGAGGCAAAATTTAATGATGTTTTC 59.882 33.333 0.00 0.00 0.00 2.29
4454 4998 7.331687 CCGAGGCAAAATTTAATGATGTTTTCT 59.668 33.333 0.00 0.00 0.00 2.52
4455 4999 8.375465 CGAGGCAAAATTTAATGATGTTTTCTC 58.625 33.333 0.00 0.00 0.00 2.87
4456 5000 8.243289 AGGCAAAATTTAATGATGTTTTCTCG 57.757 30.769 0.00 0.00 0.00 4.04
4457 5001 7.872483 AGGCAAAATTTAATGATGTTTTCTCGT 59.128 29.630 0.00 0.00 0.00 4.18
4458 5002 9.134734 GGCAAAATTTAATGATGTTTTCTCGTA 57.865 29.630 0.00 0.00 0.00 3.43
4464 5008 8.766000 TTTAATGATGTTTTCTCGTAGTAGCA 57.234 30.769 0.00 0.00 0.00 3.49
4465 5009 8.766000 TTAATGATGTTTTCTCGTAGTAGCAA 57.234 30.769 0.00 0.00 0.00 3.91
4466 5010 6.648725 ATGATGTTTTCTCGTAGTAGCAAC 57.351 37.500 0.00 0.00 0.00 4.17
4467 5011 5.779922 TGATGTTTTCTCGTAGTAGCAACT 58.220 37.500 0.00 0.00 39.91 3.16
4468 5012 6.220930 TGATGTTTTCTCGTAGTAGCAACTT 58.779 36.000 0.00 0.00 37.15 2.66
4469 5013 5.900339 TGTTTTCTCGTAGTAGCAACTTG 57.100 39.130 0.00 0.00 37.15 3.16
4470 5014 5.353938 TGTTTTCTCGTAGTAGCAACTTGT 58.646 37.500 0.00 0.00 37.15 3.16
4471 5015 5.813672 TGTTTTCTCGTAGTAGCAACTTGTT 59.186 36.000 0.00 0.00 37.15 2.83
4472 5016 6.314400 TGTTTTCTCGTAGTAGCAACTTGTTT 59.686 34.615 0.00 0.00 37.15 2.83
4473 5017 7.492020 TGTTTTCTCGTAGTAGCAACTTGTTTA 59.508 33.333 0.00 0.00 37.15 2.01
4474 5018 8.330302 GTTTTCTCGTAGTAGCAACTTGTTTAA 58.670 33.333 0.00 0.00 37.15 1.52
4475 5019 8.597662 TTTCTCGTAGTAGCAACTTGTTTAAT 57.402 30.769 0.00 0.00 37.15 1.40
4476 5020 9.695526 TTTCTCGTAGTAGCAACTTGTTTAATA 57.304 29.630 0.00 0.00 37.15 0.98
4477 5021 8.679288 TCTCGTAGTAGCAACTTGTTTAATAC 57.321 34.615 0.00 0.00 37.15 1.89
4478 5022 8.517878 TCTCGTAGTAGCAACTTGTTTAATACT 58.482 33.333 0.00 0.00 37.15 2.12
4479 5023 9.136952 CTCGTAGTAGCAACTTGTTTAATACTT 57.863 33.333 7.09 0.00 37.15 2.24
4480 5024 8.918658 TCGTAGTAGCAACTTGTTTAATACTTG 58.081 33.333 7.09 0.00 37.15 3.16
4481 5025 7.686938 CGTAGTAGCAACTTGTTTAATACTTGC 59.313 37.037 0.00 0.00 37.15 4.01
4482 5026 7.504924 AGTAGCAACTTGTTTAATACTTGCA 57.495 32.000 0.00 0.00 37.14 4.08
4483 5027 8.110860 AGTAGCAACTTGTTTAATACTTGCAT 57.889 30.769 0.00 0.00 37.14 3.96
4484 5028 8.023128 AGTAGCAACTTGTTTAATACTTGCATG 58.977 33.333 0.00 0.00 37.14 4.06
4485 5029 5.634859 AGCAACTTGTTTAATACTTGCATGC 59.365 36.000 11.82 11.82 37.14 4.06
4486 5030 5.404968 GCAACTTGTTTAATACTTGCATGCA 59.595 36.000 18.46 18.46 35.23 3.96
4487 5031 6.091169 GCAACTTGTTTAATACTTGCATGCAT 59.909 34.615 23.37 10.46 35.23 3.96
4488 5032 7.449827 CAACTTGTTTAATACTTGCATGCATG 58.550 34.615 26.93 26.93 0.00 4.06
4489 5033 6.690530 ACTTGTTTAATACTTGCATGCATGT 58.309 32.000 33.40 33.40 37.87 3.21
4490 5034 7.825681 ACTTGTTTAATACTTGCATGCATGTA 58.174 30.769 34.92 34.92 39.65 2.29
4491 5035 7.970061 ACTTGTTTAATACTTGCATGCATGTAG 59.030 33.333 35.26 27.26 39.04 2.74
4492 5036 7.389803 TGTTTAATACTTGCATGCATGTAGT 57.610 32.000 35.26 34.72 39.04 2.73
4493 5037 7.471721 TGTTTAATACTTGCATGCATGTAGTC 58.528 34.615 35.19 25.74 39.04 2.59
4494 5038 7.120432 TGTTTAATACTTGCATGCATGTAGTCA 59.880 33.333 35.19 27.32 39.04 3.41
4495 5039 7.806409 TTAATACTTGCATGCATGTAGTCAT 57.194 32.000 35.19 26.22 39.04 3.06
4496 5040 8.900983 TTAATACTTGCATGCATGTAGTCATA 57.099 30.769 35.19 25.50 39.04 2.15
4497 5041 7.806409 AATACTTGCATGCATGTAGTCATAA 57.194 32.000 35.26 22.09 39.04 1.90
4498 5042 7.991084 ATACTTGCATGCATGTAGTCATAAT 57.009 32.000 35.26 23.00 39.04 1.28
4499 5043 6.068473 ACTTGCATGCATGTAGTCATAATG 57.932 37.500 31.27 7.37 33.44 1.90
4500 5044 5.824097 ACTTGCATGCATGTAGTCATAATGA 59.176 36.000 31.27 7.97 33.13 2.57
4501 5045 7.041848 TACTTGCATGCATGTAGTCATAATGAC 60.042 37.037 31.61 11.09 39.70 3.06
4514 5058 6.337853 GTCATAATGACAGTGTGCTACTTC 57.662 41.667 0.00 0.00 46.22 3.01
4515 5059 5.292101 GTCATAATGACAGTGTGCTACTTCC 59.708 44.000 0.00 0.00 46.22 3.46
4516 5060 5.187772 TCATAATGACAGTGTGCTACTTCCT 59.812 40.000 0.00 0.00 37.60 3.36
4517 5061 4.357918 AATGACAGTGTGCTACTTCCTT 57.642 40.909 0.00 0.00 37.60 3.36
4518 5062 3.386768 TGACAGTGTGCTACTTCCTTC 57.613 47.619 0.00 0.00 37.60 3.46
4519 5063 2.965831 TGACAGTGTGCTACTTCCTTCT 59.034 45.455 0.00 0.00 37.60 2.85
4520 5064 3.005897 TGACAGTGTGCTACTTCCTTCTC 59.994 47.826 0.00 0.00 37.60 2.87
4521 5065 2.965831 ACAGTGTGCTACTTCCTTCTCA 59.034 45.455 0.00 0.00 37.60 3.27
4522 5066 3.580458 ACAGTGTGCTACTTCCTTCTCAT 59.420 43.478 0.00 0.00 37.60 2.90
4523 5067 4.040952 ACAGTGTGCTACTTCCTTCTCATT 59.959 41.667 0.00 0.00 37.60 2.57
4524 5068 4.629200 CAGTGTGCTACTTCCTTCTCATTC 59.371 45.833 0.00 0.00 37.60 2.67
4525 5069 3.935828 GTGTGCTACTTCCTTCTCATTCC 59.064 47.826 0.00 0.00 0.00 3.01
4526 5070 3.840666 TGTGCTACTTCCTTCTCATTCCT 59.159 43.478 0.00 0.00 0.00 3.36
4527 5071 4.287067 TGTGCTACTTCCTTCTCATTCCTT 59.713 41.667 0.00 0.00 0.00 3.36
4528 5072 4.873259 GTGCTACTTCCTTCTCATTCCTTC 59.127 45.833 0.00 0.00 0.00 3.46
4529 5073 4.080863 TGCTACTTCCTTCTCATTCCTTCC 60.081 45.833 0.00 0.00 0.00 3.46
4530 5074 4.163268 GCTACTTCCTTCTCATTCCTTCCT 59.837 45.833 0.00 0.00 0.00 3.36
4531 5075 5.338789 GCTACTTCCTTCTCATTCCTTCCTT 60.339 44.000 0.00 0.00 0.00 3.36
4532 5076 4.916183 ACTTCCTTCTCATTCCTTCCTTG 58.084 43.478 0.00 0.00 0.00 3.61
4533 5077 3.356529 TCCTTCTCATTCCTTCCTTGC 57.643 47.619 0.00 0.00 0.00 4.01
4534 5078 2.644299 TCCTTCTCATTCCTTCCTTGCA 59.356 45.455 0.00 0.00 0.00 4.08
4535 5079 3.267812 TCCTTCTCATTCCTTCCTTGCAT 59.732 43.478 0.00 0.00 0.00 3.96
4536 5080 3.380637 CCTTCTCATTCCTTCCTTGCATG 59.619 47.826 0.00 0.00 0.00 4.06
4537 5081 2.372264 TCTCATTCCTTCCTTGCATGC 58.628 47.619 11.82 11.82 0.00 4.06
4538 5082 2.097036 CTCATTCCTTCCTTGCATGCA 58.903 47.619 18.46 18.46 0.00 3.96
4539 5083 2.693591 CTCATTCCTTCCTTGCATGCAT 59.306 45.455 23.37 0.00 0.00 3.96
4540 5084 2.429250 TCATTCCTTCCTTGCATGCATG 59.571 45.455 23.37 23.21 0.00 4.06
4555 5099 5.347012 CATGCATGCAGACGTATTAATGA 57.653 39.130 26.69 0.00 0.00 2.57
4556 5100 5.934921 CATGCATGCAGACGTATTAATGAT 58.065 37.500 26.69 0.11 0.00 2.45
4557 5101 6.376177 CATGCATGCAGACGTATTAATGATT 58.624 36.000 26.69 0.00 0.00 2.57
4558 5102 5.989249 TGCATGCAGACGTATTAATGATTC 58.011 37.500 18.46 0.00 0.00 2.52
4559 5103 5.049474 TGCATGCAGACGTATTAATGATTCC 60.049 40.000 18.46 0.00 0.00 3.01
4560 5104 5.049474 GCATGCAGACGTATTAATGATTCCA 60.049 40.000 14.21 0.00 0.00 3.53
4561 5105 6.596703 CATGCAGACGTATTAATGATTCCAG 58.403 40.000 0.00 0.00 0.00 3.86
4562 5106 5.912892 TGCAGACGTATTAATGATTCCAGA 58.087 37.500 0.00 0.00 0.00 3.86
4563 5107 6.524734 TGCAGACGTATTAATGATTCCAGAT 58.475 36.000 0.00 0.00 0.00 2.90
4564 5108 7.666623 TGCAGACGTATTAATGATTCCAGATA 58.333 34.615 0.00 0.00 0.00 1.98
4565 5109 8.147704 TGCAGACGTATTAATGATTCCAGATAA 58.852 33.333 0.00 0.00 0.00 1.75
4566 5110 8.436200 GCAGACGTATTAATGATTCCAGATAAC 58.564 37.037 0.00 0.00 0.00 1.89
4567 5111 9.476202 CAGACGTATTAATGATTCCAGATAACA 57.524 33.333 0.00 0.00 0.00 2.41
4578 5122 8.924511 TGATTCCAGATAACAAGAAGAAAAGT 57.075 30.769 0.00 0.00 0.00 2.66
4579 5123 9.354673 TGATTCCAGATAACAAGAAGAAAAGTT 57.645 29.630 0.00 0.00 0.00 2.66
4580 5124 9.617975 GATTCCAGATAACAAGAAGAAAAGTTG 57.382 33.333 0.00 0.00 0.00 3.16
4581 5125 7.510549 TCCAGATAACAAGAAGAAAAGTTGG 57.489 36.000 0.00 0.00 0.00 3.77
4582 5126 6.016276 TCCAGATAACAAGAAGAAAAGTTGGC 60.016 38.462 0.00 0.00 0.00 4.52
4583 5127 6.015940 CCAGATAACAAGAAGAAAAGTTGGCT 60.016 38.462 0.00 0.00 0.00 4.75
4584 5128 7.428826 CAGATAACAAGAAGAAAAGTTGGCTT 58.571 34.615 0.00 0.00 36.30 4.35
4585 5129 7.380602 CAGATAACAAGAAGAAAAGTTGGCTTG 59.619 37.037 0.00 0.00 38.81 4.01
4586 5130 5.405935 AACAAGAAGAAAAGTTGGCTTGT 57.594 34.783 0.00 0.00 45.36 3.16
4587 5131 6.524101 AACAAGAAGAAAAGTTGGCTTGTA 57.476 33.333 0.00 0.00 43.41 2.41
4588 5132 6.524101 ACAAGAAGAAAAGTTGGCTTGTAA 57.476 33.333 0.00 0.00 42.69 2.41
4589 5133 6.930731 ACAAGAAGAAAAGTTGGCTTGTAAA 58.069 32.000 0.00 0.00 42.69 2.01
4618 5162 9.901172 AGTCATTAAATTTTACCTAGGTACCTG 57.099 33.333 25.33 11.28 0.00 4.00
4619 5163 9.676861 GTCATTAAATTTTACCTAGGTACCTGT 57.323 33.333 25.33 16.78 0.00 4.00
4627 5171 9.901172 ATTTTACCTAGGTACCTGTAATTTGAG 57.099 33.333 25.33 10.73 0.00 3.02
4628 5172 8.439964 TTTACCTAGGTACCTGTAATTTGAGT 57.560 34.615 25.33 10.00 0.00 3.41
4629 5173 6.947376 ACCTAGGTACCTGTAATTTGAGTT 57.053 37.500 25.33 0.00 0.00 3.01
4630 5174 7.325725 ACCTAGGTACCTGTAATTTGAGTTT 57.674 36.000 25.33 0.00 0.00 2.66
4631 5175 7.166167 ACCTAGGTACCTGTAATTTGAGTTTG 58.834 38.462 25.33 1.49 0.00 2.93
4632 5176 7.166167 CCTAGGTACCTGTAATTTGAGTTTGT 58.834 38.462 25.33 0.00 0.00 2.83
4633 5177 6.877611 AGGTACCTGTAATTTGAGTTTGTG 57.122 37.500 15.42 0.00 0.00 3.33
4634 5178 5.768164 AGGTACCTGTAATTTGAGTTTGTGG 59.232 40.000 15.42 0.00 0.00 4.17
4635 5179 4.584327 ACCTGTAATTTGAGTTTGTGGC 57.416 40.909 0.00 0.00 0.00 5.01
4636 5180 3.320826 ACCTGTAATTTGAGTTTGTGGCC 59.679 43.478 0.00 0.00 0.00 5.36
4637 5181 3.573967 CCTGTAATTTGAGTTTGTGGCCT 59.426 43.478 3.32 0.00 0.00 5.19
4638 5182 4.039124 CCTGTAATTTGAGTTTGTGGCCTT 59.961 41.667 3.32 0.00 0.00 4.35
4639 5183 4.942852 TGTAATTTGAGTTTGTGGCCTTG 58.057 39.130 3.32 0.00 0.00 3.61
4640 5184 4.404073 TGTAATTTGAGTTTGTGGCCTTGT 59.596 37.500 3.32 0.00 0.00 3.16
4641 5185 5.594725 TGTAATTTGAGTTTGTGGCCTTGTA 59.405 36.000 3.32 0.00 0.00 2.41
4642 5186 5.806654 AATTTGAGTTTGTGGCCTTGTAT 57.193 34.783 3.32 0.00 0.00 2.29
4643 5187 6.909550 AATTTGAGTTTGTGGCCTTGTATA 57.090 33.333 3.32 0.00 0.00 1.47
4644 5188 6.909550 ATTTGAGTTTGTGGCCTTGTATAA 57.090 33.333 3.32 0.00 0.00 0.98
4645 5189 5.957842 TTGAGTTTGTGGCCTTGTATAAG 57.042 39.130 3.32 0.00 0.00 1.73
4658 5202 5.234466 CTTGTATAAGGGAATGGAGGGAG 57.766 47.826 0.00 0.00 0.00 4.30
4659 5203 4.295905 TGTATAAGGGAATGGAGGGAGT 57.704 45.455 0.00 0.00 0.00 3.85
4660 5204 5.427857 TGTATAAGGGAATGGAGGGAGTA 57.572 43.478 0.00 0.00 0.00 2.59
4661 5205 5.152934 TGTATAAGGGAATGGAGGGAGTAC 58.847 45.833 0.00 0.00 0.00 2.73
4662 5206 2.972153 AAGGGAATGGAGGGAGTACT 57.028 50.000 0.00 0.00 0.00 2.73
4669 5213 6.731448 AGGGAATGGAGGGAGTACTATATTTC 59.269 42.308 0.00 0.00 0.00 2.17
4744 5288 8.237267 CACAACTCAATTTATTAGAAGGTCACC 58.763 37.037 0.00 0.00 0.00 4.02
4827 5374 4.271049 CCTATCGCTAAACTGTCAACCATG 59.729 45.833 0.00 0.00 0.00 3.66
4852 5399 5.633473 TGGTGATAGATCCCCTATAAGGT 57.367 43.478 0.00 0.00 38.17 3.50
4857 5404 7.124448 GGTGATAGATCCCCTATAAGGTTGTAG 59.876 44.444 0.00 0.00 38.17 2.74
4870 5417 0.040425 GTTGTAGCGTGCCCAACTTG 60.040 55.000 14.28 0.00 36.43 3.16
4905 5452 2.646930 CATATGCTCCTGCCACTGAAA 58.353 47.619 0.00 0.00 38.71 2.69
4920 5467 4.136796 CACTGAAACAAAGACCAGGATCA 58.863 43.478 0.00 0.00 0.00 2.92
4922 5469 3.138304 TGAAACAAAGACCAGGATCACG 58.862 45.455 0.00 0.00 0.00 4.35
4982 5654 4.227300 TGGCCTCAACTTCTGGTATATTGT 59.773 41.667 3.32 0.00 0.00 2.71
5004 5680 8.621532 TTGTTCAAGCTGTCTAATATTTGTCT 57.378 30.769 0.00 0.00 0.00 3.41
5033 5709 2.289694 CGAAGACACACTTGGGGAGAAT 60.290 50.000 0.00 0.00 39.13 2.40
5078 5754 9.060347 CACTACTATGTTAAATCATCTGGCAAT 57.940 33.333 0.00 0.00 0.00 3.56
5222 5898 1.139498 TCCTGGGGGAATGCAGACAA 61.139 55.000 0.00 0.00 38.93 3.18
5283 5959 1.202604 TGGACGACAAGGTTCTTGTCC 60.203 52.381 25.64 17.40 44.29 4.02
5445 6121 5.175127 CCTGGAACCAAATTTTATTTCCCG 58.825 41.667 15.13 10.85 35.77 5.14
5479 6155 4.651994 CGATGTAAGTTTTGTGCTCCATC 58.348 43.478 0.00 0.00 0.00 3.51
5585 6263 1.972872 ATGGCAGGAGCTTTTATCCG 58.027 50.000 0.00 0.00 42.02 4.18
5615 6293 6.074005 GCTTTCTTCAAGTCTTTGTCATACG 58.926 40.000 0.00 0.00 35.73 3.06
5662 6340 1.345422 ACCTATCCCTGGGAATGCAGA 60.345 52.381 21.42 0.00 34.34 4.26
5688 6366 7.504238 ACCCATACATCTGTTCAAAACTGTTAA 59.496 33.333 0.00 0.00 0.00 2.01
5713 6391 9.769093 AAAATGAAACTGTCTATTATGTTACGC 57.231 29.630 0.00 0.00 0.00 4.42
5718 6396 3.117794 TGTCTATTATGTTACGCCGTGC 58.882 45.455 0.00 0.00 0.00 5.34
5731 6415 1.689959 GCCGTGCATGACAAAGAAAG 58.310 50.000 7.72 0.00 0.00 2.62
5749 6433 5.012239 AGAAAGCACCATGATGTTGTATGT 58.988 37.500 0.00 0.00 0.00 2.29
5773 6458 0.805322 CTCTTCTGCAGCAGTAGCCG 60.805 60.000 22.10 11.96 43.56 5.52
5783 6468 1.737793 AGCAGTAGCCGTTTATGTTGC 59.262 47.619 0.00 0.00 43.56 4.17
5815 6500 4.656575 AGGTCTAAAAAGCTATCTCCCCTC 59.343 45.833 0.00 0.00 0.00 4.30
5818 6503 0.470341 AAAAGCTATCTCCCCTCCGC 59.530 55.000 0.00 0.00 0.00 5.54
5820 6505 4.365505 GCTATCTCCCCTCCGCGC 62.366 72.222 0.00 0.00 0.00 6.86
5895 6582 4.583073 ACCAAGTTTATTCACTGTCCAACC 59.417 41.667 0.00 0.00 0.00 3.77
5898 6585 4.457466 AGTTTATTCACTGTCCAACCGTT 58.543 39.130 0.00 0.00 0.00 4.44
5935 6622 9.447157 AATTTGTTTATTGACCACCCATATTTG 57.553 29.630 0.00 0.00 0.00 2.32
6306 6993 2.856231 AGGGGGTGGCTATTTCAATACA 59.144 45.455 0.00 0.00 0.00 2.29
6481 7182 9.830186 AACATCTCCTGGTATGTACTTATCTAT 57.170 33.333 14.71 0.00 35.30 1.98
6551 7253 5.360714 CCATAAGGTTTATGCTTCACCATGT 59.639 40.000 3.80 0.00 32.43 3.21
6649 7353 0.821711 TTGCTGCTTTGTAGGCGGTT 60.822 50.000 0.00 0.00 38.25 4.44
6855 7559 9.733556 TGAACTAAGTGGTTGTATCATATGTTT 57.266 29.630 1.90 0.00 0.00 2.83
6883 7587 5.710409 AGCACCCCTGTTATACATTTACT 57.290 39.130 0.00 0.00 0.00 2.24
6886 7590 5.527582 GCACCCCTGTTATACATTTACTGAG 59.472 44.000 0.00 0.00 0.00 3.35
7166 7873 5.794894 CATGTTACTAACAGTCTGTTCCCT 58.205 41.667 21.40 8.00 45.95 4.20
7182 7889 1.483004 TCCCTCAAGTTTGTGTCGACA 59.517 47.619 15.76 15.76 0.00 4.35
7190 7897 6.655062 TCAAGTTTGTGTCGACATTTACATC 58.345 36.000 23.12 7.34 30.13 3.06
7239 7946 2.541762 GTGCCATATCGACAAAGCTCTC 59.458 50.000 0.00 0.00 0.00 3.20
7297 8004 4.649674 CCCAGTAAGATACAAGGCTAGACA 59.350 45.833 0.00 0.00 0.00 3.41
7298 8005 5.452077 CCCAGTAAGATACAAGGCTAGACAC 60.452 48.000 0.00 0.00 0.00 3.67
7299 8006 5.361285 CCAGTAAGATACAAGGCTAGACACT 59.639 44.000 0.00 0.00 0.00 3.55
7301 8008 7.324178 CAGTAAGATACAAGGCTAGACACTTT 58.676 38.462 0.00 0.00 0.00 2.66
7302 8009 8.467598 CAGTAAGATACAAGGCTAGACACTTTA 58.532 37.037 0.00 0.00 0.00 1.85
7332 8189 4.464008 AGATGACAAACTTGAGGCTTTGA 58.536 39.130 3.04 0.00 32.63 2.69
7339 8196 1.267806 ACTTGAGGCTTTGATTGCACG 59.732 47.619 0.00 0.00 0.00 5.34
7349 8206 1.678970 GATTGCACGGGGAGGCTTT 60.679 57.895 0.00 0.00 0.00 3.51
7350 8207 1.937546 GATTGCACGGGGAGGCTTTG 61.938 60.000 0.00 0.00 0.00 2.77
7351 8208 2.713531 ATTGCACGGGGAGGCTTTGT 62.714 55.000 0.00 0.00 0.00 2.83
7471 8329 3.709653 TCGCAGATAGGTTACAGGGAAAT 59.290 43.478 0.00 0.00 0.00 2.17
7552 8410 6.452494 TTTACTTCACATCGTTCCCAAAAA 57.548 33.333 0.00 0.00 0.00 1.94
7625 8484 6.952935 AAAAGAAGCTACGATCACTGTTAG 57.047 37.500 0.00 0.00 0.00 2.34
7899 8763 5.928264 ACTTTCAAAAGCAACAGCAATATCC 59.072 36.000 2.43 0.00 39.63 2.59
7929 8793 6.531594 TGACAATCATCTGACTACGAAATCAC 59.468 38.462 0.00 0.00 0.00 3.06
7987 8851 6.093495 TCAGGTACAAGAAACAAAAGTCACAG 59.907 38.462 0.00 0.00 0.00 3.66
8102 8976 2.448926 AACGCAAATTTAGGGGCAAC 57.551 45.000 0.00 0.00 0.00 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
776 787 3.105659 GCCAGATGCGAGCCTTTC 58.894 61.111 0.00 0.00 0.00 2.62
793 804 4.093291 AGCAGCAAGGCCGGAGAG 62.093 66.667 5.05 0.00 0.00 3.20
794 805 4.087892 GAGCAGCAAGGCCGGAGA 62.088 66.667 5.05 0.00 0.00 3.71
795 806 4.093291 AGAGCAGCAAGGCCGGAG 62.093 66.667 5.05 0.00 0.00 4.63
796 807 4.399395 CAGAGCAGCAAGGCCGGA 62.399 66.667 5.05 0.00 0.00 5.14
798 809 3.670637 TAGCAGAGCAGCAAGGCCG 62.671 63.158 0.00 0.00 36.85 6.13
799 810 0.962356 TTTAGCAGAGCAGCAAGGCC 60.962 55.000 0.00 0.00 36.85 5.19
800 811 0.883833 TTTTAGCAGAGCAGCAAGGC 59.116 50.000 0.00 0.00 36.85 4.35
801 812 2.490903 ACATTTTAGCAGAGCAGCAAGG 59.509 45.455 0.00 0.00 36.85 3.61
802 813 3.844577 ACATTTTAGCAGAGCAGCAAG 57.155 42.857 0.00 0.00 36.85 4.01
803 814 3.569277 TGAACATTTTAGCAGAGCAGCAA 59.431 39.130 0.00 0.00 36.85 3.91
804 815 3.058016 GTGAACATTTTAGCAGAGCAGCA 60.058 43.478 0.00 0.00 36.85 4.41
805 816 3.058016 TGTGAACATTTTAGCAGAGCAGC 60.058 43.478 0.00 0.00 0.00 5.25
806 817 4.754372 TGTGAACATTTTAGCAGAGCAG 57.246 40.909 0.00 0.00 0.00 4.24
807 818 4.616604 GCATGTGAACATTTTAGCAGAGCA 60.617 41.667 0.00 0.00 33.61 4.26
808 819 3.855950 GCATGTGAACATTTTAGCAGAGC 59.144 43.478 0.00 0.00 33.61 4.09
809 820 5.050644 TGCATGTGAACATTTTAGCAGAG 57.949 39.130 0.00 0.00 33.61 3.35
810 821 5.648178 ATGCATGTGAACATTTTAGCAGA 57.352 34.783 0.00 0.00 35.81 4.26
811 822 9.518906 TTTATATGCATGTGAACATTTTAGCAG 57.481 29.630 10.16 0.00 35.81 4.24
812 823 9.518906 CTTTATATGCATGTGAACATTTTAGCA 57.481 29.630 10.16 8.16 36.45 3.49
813 824 9.734620 TCTTTATATGCATGTGAACATTTTAGC 57.265 29.630 10.16 0.00 33.61 3.09
858 869 1.181786 GAGAGCTATGCCTCGCCTAT 58.818 55.000 0.00 0.00 36.95 2.57
1108 1120 2.652382 GAAAGGGAGGAGCTAGCGGC 62.652 65.000 9.55 5.54 42.19 6.53
1109 1121 1.443828 GAAAGGGAGGAGCTAGCGG 59.556 63.158 9.55 0.00 0.00 5.52
1111 1123 1.227409 GCGAAAGGGAGGAGCTAGC 60.227 63.158 6.62 6.62 0.00 3.42
1113 1125 2.064581 GGGCGAAAGGGAGGAGCTA 61.065 63.158 0.00 0.00 0.00 3.32
1123 1135 2.820037 GAAGCGGAGGGGCGAAAG 60.820 66.667 0.00 0.00 38.18 2.62
1124 1136 4.752879 CGAAGCGGAGGGGCGAAA 62.753 66.667 0.00 0.00 38.18 3.46
1153 1165 2.444895 GGCGGAGGAGGAGGACAT 60.445 66.667 0.00 0.00 0.00 3.06
1257 1635 1.229209 GTGGAGTGGAGTGGAGGGA 60.229 63.158 0.00 0.00 0.00 4.20
1409 1795 0.928451 GTCACACGCAGCCGAAAAAC 60.928 55.000 0.00 0.00 38.29 2.43
1415 1801 3.108289 CTCAGTCACACGCAGCCG 61.108 66.667 0.00 0.00 41.14 5.52
1441 1827 1.071567 GCTCGACAACGTCTGTAGCC 61.072 60.000 11.42 2.53 38.84 3.93
1448 1834 1.059264 GCAACATAGCTCGACAACGTC 59.941 52.381 0.00 0.00 40.69 4.34
1453 1839 0.526211 ACTCGCAACATAGCTCGACA 59.474 50.000 0.00 0.00 0.00 4.35
1534 1928 1.089920 CCAAAATCCACTGGAGAGCG 58.910 55.000 3.62 0.00 34.05 5.03
1576 1972 6.208988 TCAGTAAGTATGCCAGTTCAGTAG 57.791 41.667 0.00 0.00 0.00 2.57
1579 1975 5.525378 GGAATCAGTAAGTATGCCAGTTCAG 59.475 44.000 0.00 0.00 0.00 3.02
1794 2190 6.378710 TTGTTCACGAAAATACCACATCAA 57.621 33.333 0.00 0.00 0.00 2.57
1842 2238 0.249911 GCCCCGAACTATAGCACCAG 60.250 60.000 0.00 0.00 0.00 4.00
1898 2294 9.354673 ACCCATCCATTACAGAACTATTAATTG 57.645 33.333 0.00 0.00 0.00 2.32
1902 2298 7.446106 ACACCCATCCATTACAGAACTATTA 57.554 36.000 0.00 0.00 0.00 0.98
1910 2306 1.750778 GGCAACACCCATCCATTACAG 59.249 52.381 0.00 0.00 0.00 2.74
1943 2339 6.039616 AGACGAATTTGACTGAATCTAGCTC 58.960 40.000 0.00 0.00 0.00 4.09
1955 2351 9.055248 CACTGAAATGAAATAGACGAATTTGAC 57.945 33.333 0.00 0.00 0.00 3.18
1964 2360 7.630242 TGGATTCCACTGAAATGAAATAGAC 57.370 36.000 0.00 0.00 33.32 2.59
1968 2364 7.307131 AGTTTGGATTCCACTGAAATGAAAT 57.693 32.000 4.45 0.00 33.32 2.17
1977 2373 5.520376 AGTCAAAAGTTTGGATTCCACTG 57.480 39.130 4.45 0.00 38.66 3.66
1981 2377 5.660460 ACACAAGTCAAAAGTTTGGATTCC 58.340 37.500 0.00 0.00 38.66 3.01
1982 2378 8.871686 ATTACACAAGTCAAAAGTTTGGATTC 57.128 30.769 0.00 0.00 38.66 2.52
1985 2381 6.378564 TGGATTACACAAGTCAAAAGTTTGGA 59.621 34.615 4.04 0.00 38.66 3.53
1986 2382 6.568869 TGGATTACACAAGTCAAAAGTTTGG 58.431 36.000 4.04 0.00 38.66 3.28
1987 2383 8.472683 TTTGGATTACACAAGTCAAAAGTTTG 57.527 30.769 0.00 0.00 39.48 2.93
1989 2385 9.665719 AATTTTGGATTACACAAGTCAAAAGTT 57.334 25.926 0.00 0.00 35.20 2.66
2126 2651 3.550275 TCACGAGAAACACAAAGAACGAG 59.450 43.478 0.00 0.00 0.00 4.18
2133 2658 5.968848 GCAAATAAGTCACGAGAAACACAAA 59.031 36.000 0.00 0.00 0.00 2.83
2134 2659 5.065346 TGCAAATAAGTCACGAGAAACACAA 59.935 36.000 0.00 0.00 0.00 3.33
2135 2660 4.572795 TGCAAATAAGTCACGAGAAACACA 59.427 37.500 0.00 0.00 0.00 3.72
2136 2661 4.904154 GTGCAAATAAGTCACGAGAAACAC 59.096 41.667 0.00 0.00 0.00 3.32
2453 2978 6.981762 ACATTTGATCACTAGAAAGCAGAG 57.018 37.500 0.00 0.00 0.00 3.35
2515 3040 7.544217 AGTGTGACAATACAAAAACAGGAAAAC 59.456 33.333 0.00 0.00 31.36 2.43
2548 3073 6.826231 TCAAGAACTGGTGTAAGTCAAAATCA 59.174 34.615 0.00 0.00 0.00 2.57
2550 3075 7.823745 ATCAAGAACTGGTGTAAGTCAAAAT 57.176 32.000 0.00 0.00 0.00 1.82
2631 3156 1.457455 CAAAGGCCAACCACCACCT 60.457 57.895 5.01 0.00 39.06 4.00
2782 3307 7.019418 CACAACTGTCAAATCATGTATGAGTG 58.981 38.462 0.74 2.18 40.64 3.51
2783 3308 6.348786 GCACAACTGTCAAATCATGTATGAGT 60.349 38.462 0.74 0.00 40.64 3.41
2796 3321 5.368145 AGAAGTTATGAGCACAACTGTCAA 58.632 37.500 0.00 0.00 35.23 3.18
2805 3330 5.078411 TCCTGAAGAGAAGTTATGAGCAC 57.922 43.478 0.00 0.00 0.00 4.40
2826 3351 0.322906 CCCAGGCTTCCTTGACCTTC 60.323 60.000 0.00 0.00 0.00 3.46
2862 3387 4.103153 ACCACATTTCCTGACTTCTCAAGA 59.897 41.667 0.00 0.00 0.00 3.02
2924 3449 5.011329 ACATCATTTGGCACATCTTGAAAGT 59.989 36.000 0.00 0.00 39.30 2.66
2927 3452 4.322123 CCACATCATTTGGCACATCTTGAA 60.322 41.667 0.00 0.00 39.30 2.69
3153 3678 5.465724 GGATGTTTAGTGCCCTAATAAGACG 59.534 44.000 0.00 0.00 33.27 4.18
3187 3713 2.365617 GGCTATGACTAAGCTAGTGGCA 59.634 50.000 0.00 0.00 44.79 4.92
3277 3803 2.224867 GCATGGATATAAGGTGCAGGGT 60.225 50.000 0.00 0.00 35.93 4.34
3528 4054 0.692476 ACTTACCATGCCAGCACTCA 59.308 50.000 0.00 0.00 0.00 3.41
3601 4129 5.921962 ACTGCACACACAGAGAAGATATA 57.078 39.130 0.00 0.00 40.25 0.86
3606 4134 1.869767 GGAACTGCACACACAGAGAAG 59.130 52.381 0.00 0.00 40.25 2.85
3615 4143 3.066621 TCTCAAAATGTGGAACTGCACAC 59.933 43.478 6.17 0.00 38.04 3.82
3696 4226 7.172361 GCAACTGAAGAATAATACTCATCTCCC 59.828 40.741 0.00 0.00 0.00 4.30
3762 4292 5.047802 TGCTGAGAAAATTTCACCATCTTCC 60.048 40.000 8.55 0.00 0.00 3.46
3846 4376 1.202533 ACCTCTTGACTTGTCCACACG 60.203 52.381 0.00 0.00 0.00 4.49
3871 4401 5.542779 AGGCTTACATATGCACTACTAAGC 58.457 41.667 18.39 18.39 36.77 3.09
3959 4489 0.321475 TGATGGCATGCGACAGTTCA 60.321 50.000 12.44 5.59 29.39 3.18
3972 4502 2.292267 CAGGTGGACTTACATGATGGC 58.708 52.381 0.00 0.00 34.50 4.40
3988 4525 2.717639 ACTCAAAGTCAACAGCAGGT 57.282 45.000 0.00 0.00 0.00 4.00
4201 4738 5.365021 AAGACTAGGCAATTGCTACAGAT 57.635 39.130 28.42 10.73 41.70 2.90
4210 4747 6.698380 CCGGTATGTATAAGACTAGGCAATT 58.302 40.000 0.00 0.00 0.00 2.32
4292 4829 5.407407 AGGTACCAACTACATGAGAACAG 57.593 43.478 15.94 0.00 0.00 3.16
4328 4872 9.565090 AGAACTATTCAATAATTCTGCATAGCA 57.435 29.630 0.23 0.00 36.92 3.49
4334 4878 8.994170 GGGAGTAGAACTATTCAATAATTCTGC 58.006 37.037 10.73 9.45 33.67 4.26
4337 4881 9.713713 GGAGGGAGTAGAACTATTCAATAATTC 57.286 37.037 6.67 0.00 0.00 2.17
4338 4882 9.225682 TGGAGGGAGTAGAACTATTCAATAATT 57.774 33.333 6.67 0.00 0.00 1.40
4339 4883 8.798975 TGGAGGGAGTAGAACTATTCAATAAT 57.201 34.615 6.67 0.00 0.00 1.28
4370 4914 9.688091 TGTATTTTTCATAGTGGCCTTGTATAA 57.312 29.630 3.32 0.00 0.00 0.98
4371 4915 9.860650 ATGTATTTTTCATAGTGGCCTTGTATA 57.139 29.630 3.32 0.00 0.00 1.47
4372 4916 8.766994 ATGTATTTTTCATAGTGGCCTTGTAT 57.233 30.769 3.32 0.00 0.00 2.29
4373 4917 8.588290 AATGTATTTTTCATAGTGGCCTTGTA 57.412 30.769 3.32 0.00 0.00 2.41
4374 4918 7.480760 AATGTATTTTTCATAGTGGCCTTGT 57.519 32.000 3.32 0.00 0.00 3.16
4375 4919 8.658609 CAAAATGTATTTTTCATAGTGGCCTTG 58.341 33.333 3.32 0.00 37.86 3.61
4376 4920 7.334171 GCAAAATGTATTTTTCATAGTGGCCTT 59.666 33.333 3.32 0.00 37.86 4.35
4377 4921 6.818142 GCAAAATGTATTTTTCATAGTGGCCT 59.182 34.615 3.32 0.00 37.86 5.19
4378 4922 6.593382 TGCAAAATGTATTTTTCATAGTGGCC 59.407 34.615 0.00 0.00 37.86 5.36
4379 4923 7.593875 TGCAAAATGTATTTTTCATAGTGGC 57.406 32.000 0.04 0.36 37.86 5.01
4380 4924 9.590451 AGATGCAAAATGTATTTTTCATAGTGG 57.410 29.630 12.78 0.00 41.38 4.00
4389 4933 9.533253 GCCTTGTATAGATGCAAAATGTATTTT 57.467 29.630 0.00 0.00 40.37 1.82
4390 4934 8.143835 GGCCTTGTATAGATGCAAAATGTATTT 58.856 33.333 0.00 0.00 32.12 1.40
4391 4935 7.287466 TGGCCTTGTATAGATGCAAAATGTATT 59.713 33.333 3.32 0.00 32.12 1.89
4392 4936 6.777091 TGGCCTTGTATAGATGCAAAATGTAT 59.223 34.615 3.32 0.00 32.12 2.29
4393 4937 6.039270 GTGGCCTTGTATAGATGCAAAATGTA 59.961 38.462 3.32 0.00 32.12 2.29
4394 4938 4.955450 TGGCCTTGTATAGATGCAAAATGT 59.045 37.500 3.32 0.00 32.12 2.71
4395 4939 5.068198 AGTGGCCTTGTATAGATGCAAAATG 59.932 40.000 3.32 0.00 32.12 2.32
4396 4940 5.203528 AGTGGCCTTGTATAGATGCAAAAT 58.796 37.500 3.32 0.00 32.12 1.82
4397 4941 4.599041 AGTGGCCTTGTATAGATGCAAAA 58.401 39.130 3.32 0.00 32.12 2.44
4398 4942 4.235079 AGTGGCCTTGTATAGATGCAAA 57.765 40.909 3.32 0.00 32.12 3.68
4399 4943 3.931907 AGTGGCCTTGTATAGATGCAA 57.068 42.857 3.32 0.00 0.00 4.08
4400 4944 4.163268 TGTTAGTGGCCTTGTATAGATGCA 59.837 41.667 3.32 0.00 0.00 3.96
4401 4945 4.703897 TGTTAGTGGCCTTGTATAGATGC 58.296 43.478 3.32 0.00 0.00 3.91
4402 4946 5.918608 ACTGTTAGTGGCCTTGTATAGATG 58.081 41.667 3.32 0.00 0.00 2.90
4403 4947 7.418712 GGTTACTGTTAGTGGCCTTGTATAGAT 60.419 40.741 3.32 0.00 0.00 1.98
4404 4948 6.127253 GGTTACTGTTAGTGGCCTTGTATAGA 60.127 42.308 3.32 0.00 0.00 1.98
4405 4949 6.047231 GGTTACTGTTAGTGGCCTTGTATAG 58.953 44.000 3.32 0.00 0.00 1.31
4406 4950 5.394443 CGGTTACTGTTAGTGGCCTTGTATA 60.394 44.000 3.32 0.00 0.00 1.47
4407 4951 4.622220 CGGTTACTGTTAGTGGCCTTGTAT 60.622 45.833 3.32 0.00 0.00 2.29
4408 4952 3.306225 CGGTTACTGTTAGTGGCCTTGTA 60.306 47.826 3.32 0.00 0.00 2.41
4409 4953 2.549349 CGGTTACTGTTAGTGGCCTTGT 60.549 50.000 3.32 0.00 0.00 3.16
4410 4954 2.073816 CGGTTACTGTTAGTGGCCTTG 58.926 52.381 3.32 0.00 0.00 3.61
4411 4955 1.972795 TCGGTTACTGTTAGTGGCCTT 59.027 47.619 3.32 0.00 0.00 4.35
4412 4956 1.549170 CTCGGTTACTGTTAGTGGCCT 59.451 52.381 3.32 0.00 0.00 5.19
4413 4957 1.405121 CCTCGGTTACTGTTAGTGGCC 60.405 57.143 0.00 0.00 0.00 5.36
4414 4958 2.005560 GCCTCGGTTACTGTTAGTGGC 61.006 57.143 0.00 0.00 34.94 5.01
4415 4959 1.274167 TGCCTCGGTTACTGTTAGTGG 59.726 52.381 0.00 0.00 0.00 4.00
4416 4960 2.736144 TGCCTCGGTTACTGTTAGTG 57.264 50.000 0.00 0.00 0.00 2.74
4417 4961 3.756933 TTTGCCTCGGTTACTGTTAGT 57.243 42.857 0.00 0.00 0.00 2.24
4418 4962 5.622770 AATTTTGCCTCGGTTACTGTTAG 57.377 39.130 0.00 0.00 0.00 2.34
4419 4963 7.507733 TTAAATTTTGCCTCGGTTACTGTTA 57.492 32.000 0.00 0.00 0.00 2.41
4420 4964 4.929819 AAATTTTGCCTCGGTTACTGTT 57.070 36.364 0.00 0.00 0.00 3.16
4421 4965 6.207810 TCATTAAATTTTGCCTCGGTTACTGT 59.792 34.615 0.00 0.00 0.00 3.55
4422 4966 6.616947 TCATTAAATTTTGCCTCGGTTACTG 58.383 36.000 0.00 0.00 0.00 2.74
4423 4967 6.827586 TCATTAAATTTTGCCTCGGTTACT 57.172 33.333 0.00 0.00 0.00 2.24
4424 4968 7.033185 ACATCATTAAATTTTGCCTCGGTTAC 58.967 34.615 0.00 0.00 0.00 2.50
4425 4969 7.164230 ACATCATTAAATTTTGCCTCGGTTA 57.836 32.000 0.00 0.00 0.00 2.85
4426 4970 6.036577 ACATCATTAAATTTTGCCTCGGTT 57.963 33.333 0.00 0.00 0.00 4.44
4427 4971 5.659440 ACATCATTAAATTTTGCCTCGGT 57.341 34.783 0.00 0.00 0.00 4.69
4428 4972 6.966435 AAACATCATTAAATTTTGCCTCGG 57.034 33.333 0.00 0.00 0.00 4.63
4429 4973 8.243289 AGAAAACATCATTAAATTTTGCCTCG 57.757 30.769 0.00 0.00 0.00 4.63
4430 4974 8.375465 CGAGAAAACATCATTAAATTTTGCCTC 58.625 33.333 0.00 0.00 0.00 4.70
4431 4975 7.872483 ACGAGAAAACATCATTAAATTTTGCCT 59.128 29.630 0.00 0.00 0.00 4.75
4432 4976 8.017587 ACGAGAAAACATCATTAAATTTTGCC 57.982 30.769 0.00 0.00 0.00 4.52
4438 4982 9.378551 TGCTACTACGAGAAAACATCATTAAAT 57.621 29.630 0.00 0.00 0.00 1.40
4439 4983 8.766000 TGCTACTACGAGAAAACATCATTAAA 57.234 30.769 0.00 0.00 0.00 1.52
4440 4984 8.653338 GTTGCTACTACGAGAAAACATCATTAA 58.347 33.333 0.00 0.00 0.00 1.40
4441 4985 8.033038 AGTTGCTACTACGAGAAAACATCATTA 58.967 33.333 0.00 0.00 31.21 1.90
4442 4986 6.874134 AGTTGCTACTACGAGAAAACATCATT 59.126 34.615 0.00 0.00 31.21 2.57
4443 4987 6.398918 AGTTGCTACTACGAGAAAACATCAT 58.601 36.000 0.00 0.00 31.21 2.45
4444 4988 5.779922 AGTTGCTACTACGAGAAAACATCA 58.220 37.500 0.00 0.00 31.21 3.07
4445 4989 6.145696 ACAAGTTGCTACTACGAGAAAACATC 59.854 38.462 1.81 0.00 33.17 3.06
4446 4990 5.989777 ACAAGTTGCTACTACGAGAAAACAT 59.010 36.000 1.81 0.00 33.17 2.71
4447 4991 5.353938 ACAAGTTGCTACTACGAGAAAACA 58.646 37.500 1.81 0.00 33.17 2.83
4448 4992 5.902051 ACAAGTTGCTACTACGAGAAAAC 57.098 39.130 1.81 0.00 33.17 2.43
4449 4993 6.913873 AAACAAGTTGCTACTACGAGAAAA 57.086 33.333 1.81 0.00 33.17 2.29
4450 4994 8.597662 ATTAAACAAGTTGCTACTACGAGAAA 57.402 30.769 1.81 0.00 33.17 2.52
4451 4995 9.132521 GTATTAAACAAGTTGCTACTACGAGAA 57.867 33.333 1.81 0.00 33.17 2.87
4452 4996 8.517878 AGTATTAAACAAGTTGCTACTACGAGA 58.482 33.333 1.81 0.00 33.17 4.04
4453 4997 8.684973 AGTATTAAACAAGTTGCTACTACGAG 57.315 34.615 1.81 0.00 33.17 4.18
4454 4998 8.918658 CAAGTATTAAACAAGTTGCTACTACGA 58.081 33.333 1.81 0.00 33.17 3.43
4455 4999 7.686938 GCAAGTATTAAACAAGTTGCTACTACG 59.313 37.037 15.67 0.00 44.79 3.51
4456 5000 8.876248 GCAAGTATTAAACAAGTTGCTACTAC 57.124 34.615 15.67 4.29 44.79 2.73
4463 5007 7.116662 ACATGCATGCAAGTATTAAACAAGTTG 59.883 33.333 25.90 14.84 0.00 3.16
4464 5008 7.153985 ACATGCATGCAAGTATTAAACAAGTT 58.846 30.769 25.90 0.00 0.00 2.66
4465 5009 6.690530 ACATGCATGCAAGTATTAAACAAGT 58.309 32.000 25.90 0.43 0.00 3.16
4466 5010 7.970061 ACTACATGCATGCAAGTATTAAACAAG 59.030 33.333 29.78 21.31 31.16 3.16
4467 5011 7.825681 ACTACATGCATGCAAGTATTAAACAA 58.174 30.769 29.78 12.28 31.16 2.83
4468 5012 7.120432 TGACTACATGCATGCAAGTATTAAACA 59.880 33.333 29.78 21.68 31.16 2.83
4469 5013 7.471721 TGACTACATGCATGCAAGTATTAAAC 58.528 34.615 29.78 19.99 31.16 2.01
4470 5014 7.622893 TGACTACATGCATGCAAGTATTAAA 57.377 32.000 29.78 16.50 31.16 1.52
4471 5015 7.806409 ATGACTACATGCATGCAAGTATTAA 57.194 32.000 29.78 20.65 35.21 1.40
4472 5016 8.900983 TTATGACTACATGCATGCAAGTATTA 57.099 30.769 29.78 20.56 37.87 0.98
4473 5017 7.806409 TTATGACTACATGCATGCAAGTATT 57.194 32.000 29.78 25.52 37.87 1.89
4474 5018 7.662669 TCATTATGACTACATGCATGCAAGTAT 59.337 33.333 29.78 20.73 37.87 2.12
4475 5019 6.991531 TCATTATGACTACATGCATGCAAGTA 59.008 34.615 28.33 28.33 37.87 2.24
4476 5020 5.824097 TCATTATGACTACATGCATGCAAGT 59.176 36.000 29.11 29.11 37.87 3.16
4477 5021 6.140786 GTCATTATGACTACATGCATGCAAG 58.859 40.000 26.68 23.45 43.73 4.01
4478 5022 6.063640 GTCATTATGACTACATGCATGCAA 57.936 37.500 26.68 13.91 43.73 4.08
4479 5023 5.678132 GTCATTATGACTACATGCATGCA 57.322 39.130 26.53 25.04 43.73 3.96
4492 5036 5.187772 AGGAAGTAGCACACTGTCATTATGA 59.812 40.000 0.00 0.00 37.63 2.15
4493 5037 5.423015 AGGAAGTAGCACACTGTCATTATG 58.577 41.667 0.00 0.00 37.63 1.90
4494 5038 5.683876 AGGAAGTAGCACACTGTCATTAT 57.316 39.130 0.00 0.00 37.63 1.28
4495 5039 5.246203 AGAAGGAAGTAGCACACTGTCATTA 59.754 40.000 0.00 0.00 37.63 1.90
4496 5040 4.040952 AGAAGGAAGTAGCACACTGTCATT 59.959 41.667 0.00 0.00 37.63 2.57
4497 5041 3.580458 AGAAGGAAGTAGCACACTGTCAT 59.420 43.478 0.00 0.00 37.63 3.06
4498 5042 2.965831 AGAAGGAAGTAGCACACTGTCA 59.034 45.455 0.00 0.00 37.63 3.58
4499 5043 3.005897 TGAGAAGGAAGTAGCACACTGTC 59.994 47.826 0.00 0.00 37.63 3.51
4500 5044 2.965831 TGAGAAGGAAGTAGCACACTGT 59.034 45.455 0.00 0.00 37.63 3.55
4501 5045 3.667497 TGAGAAGGAAGTAGCACACTG 57.333 47.619 0.00 0.00 37.63 3.66
4502 5046 4.323104 GGAATGAGAAGGAAGTAGCACACT 60.323 45.833 0.00 0.00 40.05 3.55
4503 5047 3.935828 GGAATGAGAAGGAAGTAGCACAC 59.064 47.826 0.00 0.00 0.00 3.82
4504 5048 3.840666 AGGAATGAGAAGGAAGTAGCACA 59.159 43.478 0.00 0.00 0.00 4.57
4505 5049 4.479786 AGGAATGAGAAGGAAGTAGCAC 57.520 45.455 0.00 0.00 0.00 4.40
4506 5050 4.080863 GGAAGGAATGAGAAGGAAGTAGCA 60.081 45.833 0.00 0.00 0.00 3.49
4507 5051 4.163268 AGGAAGGAATGAGAAGGAAGTAGC 59.837 45.833 0.00 0.00 0.00 3.58
4508 5052 5.948742 AGGAAGGAATGAGAAGGAAGTAG 57.051 43.478 0.00 0.00 0.00 2.57
4509 5053 5.571658 GCAAGGAAGGAATGAGAAGGAAGTA 60.572 44.000 0.00 0.00 0.00 2.24
4510 5054 4.809007 GCAAGGAAGGAATGAGAAGGAAGT 60.809 45.833 0.00 0.00 0.00 3.01
4511 5055 3.693578 GCAAGGAAGGAATGAGAAGGAAG 59.306 47.826 0.00 0.00 0.00 3.46
4512 5056 3.074390 TGCAAGGAAGGAATGAGAAGGAA 59.926 43.478 0.00 0.00 0.00 3.36
4513 5057 2.644299 TGCAAGGAAGGAATGAGAAGGA 59.356 45.455 0.00 0.00 0.00 3.36
4514 5058 3.077484 TGCAAGGAAGGAATGAGAAGG 57.923 47.619 0.00 0.00 0.00 3.46
4515 5059 3.181489 GCATGCAAGGAAGGAATGAGAAG 60.181 47.826 14.21 0.00 0.00 2.85
4516 5060 2.756760 GCATGCAAGGAAGGAATGAGAA 59.243 45.455 14.21 0.00 0.00 2.87
4517 5061 2.291089 TGCATGCAAGGAAGGAATGAGA 60.291 45.455 20.30 0.00 0.00 3.27
4518 5062 2.097036 TGCATGCAAGGAAGGAATGAG 58.903 47.619 20.30 0.00 0.00 2.90
4519 5063 2.219080 TGCATGCAAGGAAGGAATGA 57.781 45.000 20.30 0.00 0.00 2.57
4520 5064 2.821546 CATGCATGCAAGGAAGGAATG 58.178 47.619 26.68 11.19 0.00 2.67
4533 5077 5.347012 TCATTAATACGTCTGCATGCATG 57.653 39.130 22.97 22.70 0.00 4.06
4534 5078 6.348786 GGAATCATTAATACGTCTGCATGCAT 60.349 38.462 22.97 9.00 0.00 3.96
4535 5079 5.049474 GGAATCATTAATACGTCTGCATGCA 60.049 40.000 21.29 21.29 0.00 3.96
4536 5080 5.049474 TGGAATCATTAATACGTCTGCATGC 60.049 40.000 11.82 11.82 0.00 4.06
4537 5081 6.424812 TCTGGAATCATTAATACGTCTGCATG 59.575 38.462 0.00 0.00 0.00 4.06
4538 5082 6.524734 TCTGGAATCATTAATACGTCTGCAT 58.475 36.000 0.00 0.00 0.00 3.96
4539 5083 5.912892 TCTGGAATCATTAATACGTCTGCA 58.087 37.500 0.00 0.00 0.00 4.41
4540 5084 8.436200 GTTATCTGGAATCATTAATACGTCTGC 58.564 37.037 0.00 0.00 0.00 4.26
4541 5085 9.476202 TGTTATCTGGAATCATTAATACGTCTG 57.524 33.333 0.00 0.00 0.00 3.51
4552 5096 9.525826 ACTTTTCTTCTTGTTATCTGGAATCAT 57.474 29.630 0.00 0.00 0.00 2.45
4553 5097 8.924511 ACTTTTCTTCTTGTTATCTGGAATCA 57.075 30.769 0.00 0.00 0.00 2.57
4554 5098 9.617975 CAACTTTTCTTCTTGTTATCTGGAATC 57.382 33.333 0.00 0.00 0.00 2.52
4555 5099 8.579863 CCAACTTTTCTTCTTGTTATCTGGAAT 58.420 33.333 0.00 0.00 0.00 3.01
4556 5100 7.470009 GCCAACTTTTCTTCTTGTTATCTGGAA 60.470 37.037 0.00 0.00 0.00 3.53
4557 5101 6.016276 GCCAACTTTTCTTCTTGTTATCTGGA 60.016 38.462 0.00 0.00 0.00 3.86
4558 5102 6.015940 AGCCAACTTTTCTTCTTGTTATCTGG 60.016 38.462 0.00 0.00 0.00 3.86
4559 5103 6.974965 AGCCAACTTTTCTTCTTGTTATCTG 58.025 36.000 0.00 0.00 0.00 2.90
4560 5104 7.068716 ACAAGCCAACTTTTCTTCTTGTTATCT 59.931 33.333 0.00 0.00 40.55 1.98
4561 5105 7.203218 ACAAGCCAACTTTTCTTCTTGTTATC 58.797 34.615 0.00 0.00 40.55 1.75
4562 5106 7.112452 ACAAGCCAACTTTTCTTCTTGTTAT 57.888 32.000 0.00 0.00 40.55 1.89
4563 5107 6.524101 ACAAGCCAACTTTTCTTCTTGTTA 57.476 33.333 0.00 0.00 40.55 2.41
4564 5108 5.405935 ACAAGCCAACTTTTCTTCTTGTT 57.594 34.783 0.00 0.00 40.55 2.83
4565 5109 6.524101 TTACAAGCCAACTTTTCTTCTTGT 57.476 33.333 9.82 9.82 44.10 3.16
4566 5110 7.035612 ACTTTACAAGCCAACTTTTCTTCTTG 58.964 34.615 0.00 0.00 37.51 3.02
4567 5111 7.170393 ACTTTACAAGCCAACTTTTCTTCTT 57.830 32.000 0.00 0.00 32.29 2.52
4568 5112 6.775594 ACTTTACAAGCCAACTTTTCTTCT 57.224 33.333 0.00 0.00 32.29 2.85
4569 5113 7.704271 ACTACTTTACAAGCCAACTTTTCTTC 58.296 34.615 0.00 0.00 32.29 2.87
4570 5114 7.338449 TGACTACTTTACAAGCCAACTTTTCTT 59.662 33.333 0.00 0.00 32.29 2.52
4571 5115 6.826741 TGACTACTTTACAAGCCAACTTTTCT 59.173 34.615 0.00 0.00 32.29 2.52
4572 5116 7.023197 TGACTACTTTACAAGCCAACTTTTC 57.977 36.000 0.00 0.00 32.29 2.29
4573 5117 7.582667 ATGACTACTTTACAAGCCAACTTTT 57.417 32.000 0.00 0.00 32.29 2.27
4574 5118 7.582667 AATGACTACTTTACAAGCCAACTTT 57.417 32.000 0.00 0.00 32.29 2.66
4575 5119 8.685838 TTAATGACTACTTTACAAGCCAACTT 57.314 30.769 0.00 0.00 36.19 2.66
4576 5120 8.685838 TTTAATGACTACTTTACAAGCCAACT 57.314 30.769 0.00 0.00 0.00 3.16
4577 5121 9.908152 AATTTAATGACTACTTTACAAGCCAAC 57.092 29.630 0.00 0.00 0.00 3.77
4592 5136 9.901172 CAGGTACCTAGGTAAAATTTAATGACT 57.099 33.333 23.40 4.86 31.86 3.41
4593 5137 9.676861 ACAGGTACCTAGGTAAAATTTAATGAC 57.323 33.333 23.40 8.73 31.86 3.06
4601 5145 9.901172 CTCAAATTACAGGTACCTAGGTAAAAT 57.099 33.333 23.40 13.98 31.86 1.82
4602 5146 8.883302 ACTCAAATTACAGGTACCTAGGTAAAA 58.117 33.333 23.40 12.48 31.86 1.52
4603 5147 8.439964 ACTCAAATTACAGGTACCTAGGTAAA 57.560 34.615 23.40 13.70 31.86 2.01
4604 5148 8.439964 AACTCAAATTACAGGTACCTAGGTAA 57.560 34.615 23.40 21.07 31.86 2.85
4605 5149 8.316214 CAAACTCAAATTACAGGTACCTAGGTA 58.684 37.037 18.10 18.10 0.00 3.08
4606 5150 6.947376 AACTCAAATTACAGGTACCTAGGT 57.053 37.500 20.57 20.57 0.00 3.08
4607 5151 7.119262 CACAAACTCAAATTACAGGTACCTAGG 59.881 40.741 15.80 7.41 0.00 3.02
4608 5152 7.119262 CCACAAACTCAAATTACAGGTACCTAG 59.881 40.741 15.80 11.72 0.00 3.02
4609 5153 6.938030 CCACAAACTCAAATTACAGGTACCTA 59.062 38.462 15.80 0.00 0.00 3.08
4610 5154 5.768164 CCACAAACTCAAATTACAGGTACCT 59.232 40.000 9.21 9.21 0.00 3.08
4611 5155 5.564063 GCCACAAACTCAAATTACAGGTACC 60.564 44.000 2.73 2.73 0.00 3.34
4612 5156 5.458015 GCCACAAACTCAAATTACAGGTAC 58.542 41.667 0.00 0.00 0.00 3.34
4613 5157 4.521256 GGCCACAAACTCAAATTACAGGTA 59.479 41.667 0.00 0.00 0.00 3.08
4614 5158 3.320826 GGCCACAAACTCAAATTACAGGT 59.679 43.478 0.00 0.00 0.00 4.00
4615 5159 3.573967 AGGCCACAAACTCAAATTACAGG 59.426 43.478 5.01 0.00 0.00 4.00
4616 5160 4.853924 AGGCCACAAACTCAAATTACAG 57.146 40.909 5.01 0.00 0.00 2.74
4617 5161 4.404073 ACAAGGCCACAAACTCAAATTACA 59.596 37.500 5.01 0.00 0.00 2.41
4618 5162 4.944048 ACAAGGCCACAAACTCAAATTAC 58.056 39.130 5.01 0.00 0.00 1.89
4619 5163 6.909550 ATACAAGGCCACAAACTCAAATTA 57.090 33.333 5.01 0.00 0.00 1.40
4620 5164 5.806654 ATACAAGGCCACAAACTCAAATT 57.193 34.783 5.01 0.00 0.00 1.82
4621 5165 6.071391 CCTTATACAAGGCCACAAACTCAAAT 60.071 38.462 5.01 0.00 44.90 2.32
4622 5166 5.242838 CCTTATACAAGGCCACAAACTCAAA 59.757 40.000 5.01 0.00 44.90 2.69
4623 5167 4.764823 CCTTATACAAGGCCACAAACTCAA 59.235 41.667 5.01 0.00 44.90 3.02
4624 5168 4.331968 CCTTATACAAGGCCACAAACTCA 58.668 43.478 5.01 0.00 44.90 3.41
4625 5169 4.965119 CCTTATACAAGGCCACAAACTC 57.035 45.455 5.01 0.00 44.90 3.01
4636 5180 4.660771 ACTCCCTCCATTCCCTTATACAAG 59.339 45.833 0.00 0.00 0.00 3.16
4637 5181 4.641868 ACTCCCTCCATTCCCTTATACAA 58.358 43.478 0.00 0.00 0.00 2.41
4638 5182 4.295905 ACTCCCTCCATTCCCTTATACA 57.704 45.455 0.00 0.00 0.00 2.29
4639 5183 5.404395 AGTACTCCCTCCATTCCCTTATAC 58.596 45.833 0.00 0.00 0.00 1.47
4640 5184 5.698369 AGTACTCCCTCCATTCCCTTATA 57.302 43.478 0.00 0.00 0.00 0.98
4641 5185 4.578149 AGTACTCCCTCCATTCCCTTAT 57.422 45.455 0.00 0.00 0.00 1.73
4642 5186 5.698369 ATAGTACTCCCTCCATTCCCTTA 57.302 43.478 0.00 0.00 0.00 2.69
4643 5187 2.972153 AGTACTCCCTCCATTCCCTT 57.028 50.000 0.00 0.00 0.00 3.95
4644 5188 5.905633 ATATAGTACTCCCTCCATTCCCT 57.094 43.478 0.00 0.00 0.00 4.20
4645 5189 6.500751 TGAAATATAGTACTCCCTCCATTCCC 59.499 42.308 0.00 0.00 0.00 3.97
4646 5190 7.554959 TGAAATATAGTACTCCCTCCATTCC 57.445 40.000 0.00 0.00 0.00 3.01
4647 5191 9.660180 GAATGAAATATAGTACTCCCTCCATTC 57.340 37.037 0.00 9.35 0.00 2.67
4648 5192 9.170890 TGAATGAAATATAGTACTCCCTCCATT 57.829 33.333 0.00 4.01 0.00 3.16
4649 5193 8.742125 TGAATGAAATATAGTACTCCCTCCAT 57.258 34.615 0.00 0.00 0.00 3.41
4650 5194 8.561536 TTGAATGAAATATAGTACTCCCTCCA 57.438 34.615 0.00 0.00 0.00 3.86
4651 5195 9.847224 TTTTGAATGAAATATAGTACTCCCTCC 57.153 33.333 0.00 0.00 0.00 4.30
4852 5399 0.464735 ACAAGTTGGGCACGCTACAA 60.465 50.000 7.96 0.00 0.00 2.41
4857 5404 1.791103 TAGCAACAAGTTGGGCACGC 61.791 55.000 19.72 9.46 40.74 5.34
4870 5417 1.949525 CATATGGTGGCTGGTAGCAAC 59.050 52.381 2.99 1.29 44.44 4.17
4905 5452 0.324943 CCCGTGATCCTGGTCTTTGT 59.675 55.000 0.00 0.00 0.00 2.83
4920 5467 9.681062 ACAAATATAAAATATATAGCTGCCCGT 57.319 29.630 0.00 0.00 0.00 5.28
5004 5680 4.142160 CCCAAGTGTGTCTTCGATCTATGA 60.142 45.833 0.00 0.00 33.63 2.15
5033 5709 0.884704 GGTTCTTGAACAGCTCCGCA 60.885 55.000 14.38 0.00 0.00 5.69
5069 5745 2.489329 CGAAAGGTCACAATTGCCAGAT 59.511 45.455 5.05 0.00 0.00 2.90
5111 5787 6.767524 AACACATTTTTACCACTGAACTCA 57.232 33.333 0.00 0.00 0.00 3.41
5146 5822 0.251564 TGCCATCAATGAACCCGGTT 60.252 50.000 1.22 1.22 0.00 4.44
5222 5898 5.766150 TTGATCGGACATCAAACAACTTT 57.234 34.783 0.00 0.00 35.35 2.66
5283 5959 1.335810 ACAAGCTGCTGTCAACATGTG 59.664 47.619 1.35 0.00 0.00 3.21
5445 6121 2.224066 ACTTACATCGCATCCTGCTACC 60.224 50.000 0.00 0.00 42.25 3.18
5527 6203 8.369218 TCATGCACATAGTCACATAACTAATG 57.631 34.615 0.00 0.00 41.74 1.90
5585 6263 3.133141 AGACTTGAAGAAAGCAGGGAC 57.867 47.619 0.00 0.00 39.76 4.46
5615 6293 6.706270 TGAACAATGAAGTCTGGAGTAGAAAC 59.294 38.462 0.00 0.00 37.12 2.78
5662 6340 5.385198 ACAGTTTTGAACAGATGTATGGGT 58.615 37.500 0.00 0.00 0.00 4.51
5688 6366 8.395633 GGCGTAACATAATAGACAGTTTCATTT 58.604 33.333 0.00 0.00 0.00 2.32
5713 6391 1.001487 TGCTTTCTTTGTCATGCACGG 60.001 47.619 0.00 0.00 0.00 4.94
5718 6396 4.508461 TCATGGTGCTTTCTTTGTCATG 57.492 40.909 0.00 0.00 33.83 3.07
5731 6415 3.016031 TCCACATACAACATCATGGTGC 58.984 45.455 5.69 0.00 39.04 5.01
5749 6433 1.123861 ACTGCTGCAGAAGAGGTCCA 61.124 55.000 34.28 7.47 35.18 4.02
5773 6458 7.145932 AGACCTGATACAAAGCAACATAAAC 57.854 36.000 0.00 0.00 0.00 2.01
5783 6468 9.606631 AGATAGCTTTTTAGACCTGATACAAAG 57.393 33.333 0.00 0.00 0.00 2.77
5815 6500 4.735132 TTCTTCCACTCCGCGCGG 62.735 66.667 42.13 42.13 0.00 6.46
5818 6503 4.110493 GGATTCTTCCACTCCGCG 57.890 61.111 0.00 0.00 42.12 6.46
5850 6536 1.669604 TGTAAAGCAGGTGAACGCAA 58.330 45.000 0.00 0.00 0.00 4.85
5935 6622 3.874392 ACTGGCTGCAAAAATATCCAC 57.126 42.857 0.50 0.00 0.00 4.02
6306 6993 1.132689 ACAGAAGGGTCTTCTCCAGGT 60.133 52.381 7.16 0.96 28.78 4.00
6501 7203 6.312399 TGAAACCAAACTACTGCTGTAATG 57.688 37.500 4.91 4.81 0.00 1.90
6551 7253 3.563479 GGGTCTAGGGCAGGAAAAATGAA 60.563 47.826 0.00 0.00 0.00 2.57
6649 7353 7.495934 CCAAGTTCTTTCAGTCTAGTCTCAAAA 59.504 37.037 0.00 0.00 0.00 2.44
6855 7559 4.034410 TGTATAACAGGGGTGCTATGTCA 58.966 43.478 0.00 0.00 0.00 3.58
6883 7587 4.577693 GCAATGAAAGATGTATCCTGCTCA 59.422 41.667 0.00 0.00 0.00 4.26
6886 7590 4.023365 GGAGCAATGAAAGATGTATCCTGC 60.023 45.833 0.00 0.00 0.00 4.85
7090 7794 3.730761 CAGCAGCCACCGTCTTGC 61.731 66.667 0.00 0.00 0.00 4.01
7166 7873 6.481976 AGATGTAAATGTCGACACAAACTTGA 59.518 34.615 22.71 0.45 35.64 3.02
7182 7889 7.636150 ACATAAGCTCTGCAAAGATGTAAAT 57.364 32.000 0.00 0.00 0.00 1.40
7190 7897 6.093219 ACATGAACTACATAAGCTCTGCAAAG 59.907 38.462 0.00 0.00 37.46 2.77
7239 7946 1.151668 CTGCCAACTGAAAGGTCTCG 58.848 55.000 0.00 0.00 39.30 4.04
7302 8009 9.247861 AGCCTCAAGTTTGTCATCTTTATTTAT 57.752 29.630 0.00 0.00 0.00 1.40
7304 8011 7.530426 AGCCTCAAGTTTGTCATCTTTATTT 57.470 32.000 0.00 0.00 0.00 1.40
7305 8012 7.530426 AAGCCTCAAGTTTGTCATCTTTATT 57.470 32.000 0.00 0.00 0.00 1.40
7309 8016 4.889409 TCAAAGCCTCAAGTTTGTCATCTT 59.111 37.500 0.00 0.00 35.54 2.40
7311 8018 4.836125 TCAAAGCCTCAAGTTTGTCATC 57.164 40.909 0.00 0.00 35.54 2.92
7312 8019 5.535333 CAATCAAAGCCTCAAGTTTGTCAT 58.465 37.500 0.00 0.00 35.54 3.06
7313 8020 4.737352 GCAATCAAAGCCTCAAGTTTGTCA 60.737 41.667 0.00 0.00 35.54 3.58
7314 8021 3.737774 GCAATCAAAGCCTCAAGTTTGTC 59.262 43.478 0.00 0.00 35.54 3.18
7315 8022 3.132646 TGCAATCAAAGCCTCAAGTTTGT 59.867 39.130 0.00 0.00 35.54 2.83
7316 8023 3.492011 GTGCAATCAAAGCCTCAAGTTTG 59.508 43.478 0.00 0.00 35.38 2.93
7319 8026 1.267806 CGTGCAATCAAAGCCTCAAGT 59.732 47.619 0.00 0.00 0.00 3.16
7320 8027 1.401931 CCGTGCAATCAAAGCCTCAAG 60.402 52.381 0.00 0.00 0.00 3.02
7321 8028 0.597568 CCGTGCAATCAAAGCCTCAA 59.402 50.000 0.00 0.00 0.00 3.02
7323 8030 1.508088 CCCGTGCAATCAAAGCCTC 59.492 57.895 0.00 0.00 0.00 4.70
7324 8031 1.978617 CCCCGTGCAATCAAAGCCT 60.979 57.895 0.00 0.00 0.00 4.58
7325 8032 1.937546 CTCCCCGTGCAATCAAAGCC 61.938 60.000 0.00 0.00 0.00 4.35
7326 8033 1.508088 CTCCCCGTGCAATCAAAGC 59.492 57.895 0.00 0.00 0.00 3.51
7327 8034 1.937546 GCCTCCCCGTGCAATCAAAG 61.938 60.000 0.00 0.00 0.00 2.77
7332 8189 1.978617 CAAAGCCTCCCCGTGCAAT 60.979 57.895 0.00 0.00 0.00 3.56
7339 8196 4.083565 TGTATACAAAACAAAGCCTCCCC 58.916 43.478 2.20 0.00 0.00 4.81
7384 8241 6.594159 CCATTCACCGTACTGTCTTTTATTCT 59.406 38.462 0.00 0.00 0.00 2.40
7385 8242 6.370718 ACCATTCACCGTACTGTCTTTTATTC 59.629 38.462 0.00 0.00 0.00 1.75
7471 8329 7.013846 CCCCTTAATCTGTATAAATTTTGCCGA 59.986 37.037 0.00 0.00 0.00 5.54
7603 8462 5.185249 TCCTAACAGTGATCGTAGCTTCTTT 59.815 40.000 0.00 0.00 0.00 2.52
7622 8481 6.527423 CCCTAATAAAACGCCATACTCCTAA 58.473 40.000 0.00 0.00 0.00 2.69
7625 8484 3.501062 GCCCTAATAAAACGCCATACTCC 59.499 47.826 0.00 0.00 0.00 3.85
7899 8763 5.743872 TCGTAGTCAGATGATTGTCATTTCG 59.256 40.000 0.00 0.00 37.20 3.46
7929 8793 2.033194 GGTGCCCCTTTTCGACTCG 61.033 63.158 0.00 0.00 0.00 4.18
8007 8871 8.978539 GTGCTCAAACAATTATATGTCTCGATA 58.021 33.333 0.00 0.00 31.81 2.92
8009 8873 6.257849 GGTGCTCAAACAATTATATGTCTCGA 59.742 38.462 0.00 0.00 31.81 4.04
8010 8874 6.258727 AGGTGCTCAAACAATTATATGTCTCG 59.741 38.462 0.00 0.00 31.81 4.04
8012 8876 7.227512 GCTAGGTGCTCAAACAATTATATGTCT 59.772 37.037 0.00 0.00 38.95 3.41
8015 8879 7.263100 TGCTAGGTGCTCAAACAATTATATG 57.737 36.000 0.00 0.00 43.37 1.78
8017 8881 8.210946 ACTATGCTAGGTGCTCAAACAATTATA 58.789 33.333 0.00 0.00 43.37 0.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.