Multiple sequence alignment - TraesCS3D01G448500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G448500 chr3D 100.000 4004 0 0 1 4004 556894042 556898045 0.000000e+00 7395.0
1 TraesCS3D01G448500 chr3D 83.526 777 118 7 2315 3084 556637505 556638278 0.000000e+00 717.0
2 TraesCS3D01G448500 chr3D 83.333 540 66 10 973 1498 556635092 556635621 1.010000e-130 477.0
3 TraesCS3D01G448500 chr3D 78.788 330 55 10 998 1312 556034782 556034453 1.460000e-49 207.0
4 TraesCS3D01G448500 chr3D 77.508 329 69 4 987 1311 556102527 556102200 4.080000e-45 193.0
5 TraesCS3D01G448500 chr3D 81.224 245 35 5 2044 2278 556636686 556636929 1.900000e-43 187.0
6 TraesCS3D01G448500 chr3D 77.039 331 71 4 985 1311 556100221 556099892 6.830000e-43 185.0
7 TraesCS3D01G448500 chr3D 84.409 186 26 2 985 1167 556127201 556127016 3.180000e-41 180.0
8 TraesCS3D01G448500 chr3D 86.667 120 16 0 2138 2257 556033846 556033727 2.510000e-27 134.0
9 TraesCS3D01G448500 chr3D 92.308 65 5 0 2932 2996 556913254 556913318 4.260000e-15 93.5
10 TraesCS3D01G448500 chr3D 81.481 108 18 2 2146 2252 556173313 556173207 1.980000e-13 87.9
11 TraesCS3D01G448500 chr3B 92.451 2252 154 7 1436 3679 739338938 739341181 0.000000e+00 3203.0
12 TraesCS3D01G448500 chr3B 93.276 699 33 5 765 1463 739338353 739339037 0.000000e+00 1018.0
13 TraesCS3D01G448500 chr3B 78.485 330 64 7 987 1311 739066276 739065949 4.050000e-50 209.0
14 TraesCS3D01G448500 chr3B 78.125 352 60 13 977 1311 739033869 739033518 1.460000e-49 207.0
15 TraesCS3D01G448500 chr3B 86.667 120 16 0 2138 2257 739032905 739032786 2.510000e-27 134.0
16 TraesCS3D01G448500 chr3B 82.569 109 15 4 2146 2252 739173626 739173520 4.260000e-15 93.5
17 TraesCS3D01G448500 chr3B 87.179 78 10 0 2146 2223 739202950 739202873 5.510000e-14 89.8
18 TraesCS3D01G448500 chr6B 86.842 646 64 8 3 631 127742359 127741718 0.000000e+00 702.0
19 TraesCS3D01G448500 chr4B 86.441 649 65 11 3 632 249035483 249034839 0.000000e+00 689.0
20 TraesCS3D01G448500 chr4B 88.828 367 34 6 265 628 583136244 583136606 1.020000e-120 444.0
21 TraesCS3D01G448500 chr4B 88.285 239 26 2 2 240 583135792 583136028 6.550000e-73 285.0
22 TraesCS3D01G448500 chr4B 87.273 110 14 0 637 746 249034773 249034664 4.200000e-25 126.0
23 TraesCS3D01G448500 chr4B 100.000 29 0 0 3142 3170 6388151 6388123 2.000000e-03 54.7
24 TraesCS3D01G448500 chr2D 86.124 663 55 14 3 631 169054155 169053496 0.000000e+00 680.0
25 TraesCS3D01G448500 chr2D 91.566 332 23 4 3677 4004 623912171 623912501 1.700000e-123 453.0
26 TraesCS3D01G448500 chr2D 91.265 332 24 4 3677 4004 621120340 621120010 7.890000e-122 448.0
27 TraesCS3D01G448500 chr2D 84.167 120 15 2 627 746 169053436 169053321 3.270000e-21 113.0
28 TraesCS3D01G448500 chr5B 85.759 646 71 8 3 631 173225002 173224361 0.000000e+00 664.0
29 TraesCS3D01G448500 chrUn 85.670 642 70 9 3 627 33249570 33248934 0.000000e+00 656.0
30 TraesCS3D01G448500 chrUn 88.182 110 13 0 637 746 33248863 33248754 9.030000e-27 132.0
31 TraesCS3D01G448500 chr6A 94.030 335 16 3 3674 4004 346595213 346595547 4.620000e-139 505.0
32 TraesCS3D01G448500 chr6A 90.769 65 6 0 638 702 162781063 162781127 1.980000e-13 87.9
33 TraesCS3D01G448500 chr5A 92.424 330 20 4 3679 4004 685990907 685991235 2.180000e-127 466.0
34 TraesCS3D01G448500 chr5A 90.616 341 26 6 3668 4004 346120658 346120996 7.890000e-122 448.0
35 TraesCS3D01G448500 chr5A 82.740 365 50 9 265 617 623378374 623378011 3.000000e-81 313.0
36 TraesCS3D01G448500 chr5A 86.301 146 18 2 93 238 623378583 623378440 1.490000e-34 158.0
37 TraesCS3D01G448500 chr6D 92.401 329 18 5 3681 4004 164119548 164119222 2.820000e-126 462.0
38 TraesCS3D01G448500 chr7B 92.097 329 22 4 3679 4004 608946058 608945731 1.010000e-125 460.0
39 TraesCS3D01G448500 chr4A 91.395 337 23 6 3673 4004 729536749 729537084 1.310000e-124 457.0
40 TraesCS3D01G448500 chr7A 91.045 335 24 5 3674 4004 13340846 13341178 7.890000e-122 448.0
41 TraesCS3D01G448500 chr3A 85.357 280 29 9 362 632 177871562 177871286 3.050000e-71 279.0
42 TraesCS3D01G448500 chr3A 77.644 331 69 4 985 1311 693074234 693073905 3.160000e-46 196.0
43 TraesCS3D01G448500 chr3A 73.502 434 95 18 2146 2572 693113070 693112650 3.220000e-31 147.0
44 TraesCS3D01G448500 chr1B 85.357 280 29 9 362 632 1728214 1728490 3.050000e-71 279.0
45 TraesCS3D01G448500 chr1D 80.833 120 20 1 627 746 100056365 100056481 1.530000e-14 91.6
46 TraesCS3D01G448500 chr7D 80.165 121 19 3 627 746 517325152 517325268 7.130000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G448500 chr3D 556894042 556898045 4003 False 7395.000000 7395 100.000000 1 4004 1 chr3D.!!$F1 4003
1 TraesCS3D01G448500 chr3D 556635092 556638278 3186 False 460.333333 717 82.694333 973 3084 3 chr3D.!!$F3 2111
2 TraesCS3D01G448500 chr3B 739338353 739341181 2828 False 2110.500000 3203 92.863500 765 3679 2 chr3B.!!$F1 2914
3 TraesCS3D01G448500 chr6B 127741718 127742359 641 True 702.000000 702 86.842000 3 631 1 chr6B.!!$R1 628
4 TraesCS3D01G448500 chr4B 249034664 249035483 819 True 407.500000 689 86.857000 3 746 2 chr4B.!!$R2 743
5 TraesCS3D01G448500 chr4B 583135792 583136606 814 False 364.500000 444 88.556500 2 628 2 chr4B.!!$F1 626
6 TraesCS3D01G448500 chr2D 169053321 169054155 834 True 396.500000 680 85.145500 3 746 2 chr2D.!!$R2 743
7 TraesCS3D01G448500 chr5B 173224361 173225002 641 True 664.000000 664 85.759000 3 631 1 chr5B.!!$R1 628
8 TraesCS3D01G448500 chrUn 33248754 33249570 816 True 394.000000 656 86.926000 3 746 2 chrUn.!!$R1 743
9 TraesCS3D01G448500 chr5A 623378011 623378583 572 True 235.500000 313 84.520500 93 617 2 chr5A.!!$R1 524

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
660 940 0.250727 TGCGCTTGCCTCCTTAAAGT 60.251 50.0 9.73 0.00 38.03 2.66 F
738 1018 0.319727 TTTCGATACAACGCACGGGT 60.320 50.0 0.00 0.00 0.00 5.28 F
2588 4106 0.260816 ACCTTGGCATGCCATGATCT 59.739 50.0 40.11 24.84 46.64 2.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2115 3085 0.464735 CCTCGGGTTTGTTGTGGACA 60.465 55.0 0.0 0.0 36.19 4.02 R
2701 4219 0.396811 GCCTCACCACACCTAGTGTT 59.603 55.0 0.0 0.0 45.08 3.32 R
3831 5353 0.030399 GGGTGGGGATGGGTAGTACT 60.030 60.0 0.0 0.0 0.00 2.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
142 144 2.440147 CTGGTGTGGGGGCAATGA 59.560 61.111 0.00 0.00 0.00 2.57
143 145 1.978617 CTGGTGTGGGGGCAATGAC 60.979 63.158 0.00 0.00 0.00 3.06
151 153 2.700773 GGGGCAATGACGGCTTGAC 61.701 63.158 4.85 1.61 0.00 3.18
178 180 0.606401 AGCGTGTATGCTTGGCTGTT 60.606 50.000 0.00 0.00 44.46 3.16
181 183 2.346803 CGTGTATGCTTGGCTGTTAGT 58.653 47.619 0.00 0.00 0.00 2.24
263 289 1.615883 AGATGCGAGACACAACTCAGT 59.384 47.619 0.00 0.00 36.80 3.41
302 506 4.380867 CCGATGCAAGCAAGTAGGAAATTT 60.381 41.667 0.00 0.00 0.00 1.82
319 524 1.750193 TTTTCACGAGGGATGGATGC 58.250 50.000 0.00 0.00 0.00 3.91
322 527 0.977627 TCACGAGGGATGGATGCAGT 60.978 55.000 0.00 0.00 0.00 4.40
359 564 1.007387 CGCTTTGCCAAAGGTCCAC 60.007 57.895 18.29 0.94 38.93 4.02
373 578 5.649782 AAGGTCCACAATGCTCTTTTATG 57.350 39.130 0.00 0.00 0.00 1.90
419 631 6.714356 CCTTTCTTCTCTGTCTCCATCTTTTT 59.286 38.462 0.00 0.00 0.00 1.94
459 671 0.315886 AGTGACAATGTACGGTCGCA 59.684 50.000 20.56 2.05 44.73 5.10
466 678 2.581409 GTACGGTCGCACGGATGG 60.581 66.667 3.77 0.00 38.39 3.51
549 762 0.774491 AACACCTTGGCCCCCTCTAA 60.774 55.000 0.00 0.00 0.00 2.10
578 796 0.535102 CGGCTCCCGGCTTTATCAAT 60.535 55.000 0.00 0.00 44.15 2.57
579 797 1.692411 GGCTCCCGGCTTTATCAATT 58.308 50.000 0.00 0.00 41.46 2.32
580 798 1.609072 GGCTCCCGGCTTTATCAATTC 59.391 52.381 0.00 0.00 41.46 2.17
581 799 2.297701 GCTCCCGGCTTTATCAATTCA 58.702 47.619 0.00 0.00 38.06 2.57
583 801 2.880890 CTCCCGGCTTTATCAATTCAGG 59.119 50.000 0.00 0.00 0.00 3.86
584 802 1.338020 CCCGGCTTTATCAATTCAGGC 59.662 52.381 0.00 0.00 0.00 4.85
628 846 3.229293 TGATGAAATGTGGTTGCCTTCA 58.771 40.909 0.00 0.00 0.00 3.02
632 850 6.832900 TGATGAAATGTGGTTGCCTTCATATA 59.167 34.615 0.00 0.00 36.97 0.86
633 851 6.449635 TGAAATGTGGTTGCCTTCATATAC 57.550 37.500 0.00 0.00 0.00 1.47
634 852 5.065859 TGAAATGTGGTTGCCTTCATATACG 59.934 40.000 0.00 0.00 0.00 3.06
635 853 3.620427 TGTGGTTGCCTTCATATACGT 57.380 42.857 0.00 0.00 0.00 3.57
648 927 3.305897 TCATATACGTTGTCTTGCGCTTG 59.694 43.478 9.73 0.65 0.00 4.01
654 934 2.359230 GTCTTGCGCTTGCCTCCT 60.359 61.111 9.73 0.00 38.03 3.69
659 939 0.881118 TTGCGCTTGCCTCCTTAAAG 59.119 50.000 9.73 0.00 38.03 1.85
660 940 0.250727 TGCGCTTGCCTCCTTAAAGT 60.251 50.000 9.73 0.00 38.03 2.66
663 943 2.427506 CGCTTGCCTCCTTAAAGTTCT 58.572 47.619 0.00 0.00 0.00 3.01
697 977 2.402305 CCGCTAGCTTCTGACATGATC 58.598 52.381 13.93 0.00 0.00 2.92
720 1000 7.214467 TCGATGGCATCTTAAACTTTTTCTT 57.786 32.000 23.97 0.00 0.00 2.52
721 1001 7.657336 TCGATGGCATCTTAAACTTTTTCTTT 58.343 30.769 23.97 0.00 0.00 2.52
724 1004 7.033530 TGGCATCTTAAACTTTTTCTTTCGA 57.966 32.000 0.00 0.00 0.00 3.71
726 1006 8.788806 TGGCATCTTAAACTTTTTCTTTCGATA 58.211 29.630 0.00 0.00 0.00 2.92
738 1018 0.319727 TTTCGATACAACGCACGGGT 60.320 50.000 0.00 0.00 0.00 5.28
746 1026 2.492012 ACAACGCACGGGTACATTTAA 58.508 42.857 0.00 0.00 0.00 1.52
747 1027 2.481185 ACAACGCACGGGTACATTTAAG 59.519 45.455 0.00 0.00 0.00 1.85
748 1028 2.737783 CAACGCACGGGTACATTTAAGA 59.262 45.455 0.00 0.00 0.00 2.10
749 1029 3.255969 ACGCACGGGTACATTTAAGAT 57.744 42.857 0.00 0.00 0.00 2.40
750 1030 3.602483 ACGCACGGGTACATTTAAGATT 58.398 40.909 0.00 0.00 0.00 2.40
751 1031 4.004982 ACGCACGGGTACATTTAAGATTT 58.995 39.130 0.00 0.00 0.00 2.17
752 1032 4.142773 ACGCACGGGTACATTTAAGATTTG 60.143 41.667 0.00 0.00 0.00 2.32
753 1033 4.142773 CGCACGGGTACATTTAAGATTTGT 60.143 41.667 0.00 0.00 0.00 2.83
754 1034 5.618195 CGCACGGGTACATTTAAGATTTGTT 60.618 40.000 0.00 0.00 0.00 2.83
755 1035 6.153756 GCACGGGTACATTTAAGATTTGTTT 58.846 36.000 0.00 0.00 0.00 2.83
756 1036 6.643360 GCACGGGTACATTTAAGATTTGTTTT 59.357 34.615 0.00 0.00 0.00 2.43
757 1037 7.148869 GCACGGGTACATTTAAGATTTGTTTTC 60.149 37.037 0.00 0.00 0.00 2.29
758 1038 7.327518 CACGGGTACATTTAAGATTTGTTTTCC 59.672 37.037 0.00 0.00 0.00 3.13
759 1039 6.809689 CGGGTACATTTAAGATTTGTTTTCCC 59.190 38.462 0.00 0.00 0.00 3.97
760 1040 7.309560 CGGGTACATTTAAGATTTGTTTTCCCT 60.310 37.037 0.00 0.00 31.51 4.20
761 1041 8.372459 GGGTACATTTAAGATTTGTTTTCCCTT 58.628 33.333 0.00 0.00 31.27 3.95
762 1042 9.203421 GGTACATTTAAGATTTGTTTTCCCTTG 57.797 33.333 0.00 0.00 0.00 3.61
763 1043 7.728847 ACATTTAAGATTTGTTTTCCCTTGC 57.271 32.000 0.00 0.00 0.00 4.01
779 1059 3.632145 CCCTTGCAGTTGTAACTTTGACT 59.368 43.478 0.00 0.00 37.08 3.41
783 1063 5.637006 TGCAGTTGTAACTTTGACTTTGT 57.363 34.783 0.00 0.00 37.08 2.83
792 1072 5.952526 AACTTTGACTTTGTAATACGGGG 57.047 39.130 0.00 0.00 0.00 5.73
793 1073 3.754850 ACTTTGACTTTGTAATACGGGGC 59.245 43.478 0.00 0.00 0.00 5.80
794 1074 2.406596 TGACTTTGTAATACGGGGCC 57.593 50.000 0.00 0.00 0.00 5.80
824 1104 3.670627 GCCCAATGAATCGAGTCACAAAC 60.671 47.826 18.95 3.45 0.00 2.93
858 1138 2.806856 GAGATGCAGCGCAACCGAG 61.807 63.158 11.47 0.00 43.62 4.63
913 1193 8.363029 CGGCGATTCTAAAAAGAAAAATTGTAC 58.637 33.333 0.00 0.00 0.00 2.90
917 1197 9.989394 GATTCTAAAAAGAAAAATTGTACGCAC 57.011 29.630 0.00 0.00 0.00 5.34
932 1212 4.410400 CACCCGTTCCCTGCCCTC 62.410 72.222 0.00 0.00 0.00 4.30
936 1216 4.101448 CGTTCCCTGCCCTCCCTG 62.101 72.222 0.00 0.00 0.00 4.45
952 1232 2.242196 TCCCTGAAGTCCCAATTCCATC 59.758 50.000 0.00 0.00 0.00 3.51
954 1234 2.292267 CTGAAGTCCCAATTCCATCGG 58.708 52.381 0.00 0.00 0.00 4.18
955 1235 1.025041 GAAGTCCCAATTCCATCGGC 58.975 55.000 0.00 0.00 0.00 5.54
1046 1329 0.752009 CTCCCCGACGATCTTCTCCA 60.752 60.000 0.00 0.00 0.00 3.86
1314 1603 2.757077 AGGCTTACCCTGCGCTTT 59.243 55.556 9.73 0.00 44.28 3.51
1328 1617 3.413327 TGCGCTTTAACTTCATGGGTAA 58.587 40.909 9.73 0.00 0.00 2.85
1337 1626 4.667519 ACTTCATGGGTAACTACGGATC 57.332 45.455 0.00 0.00 0.00 3.36
1347 1636 6.071560 TGGGTAACTACGGATCTAGCATAATG 60.072 42.308 0.00 0.00 0.00 1.90
1432 1802 2.348888 CCAGAAGGCTACCGGTCGT 61.349 63.158 12.40 0.00 0.00 4.34
1458 2377 2.509336 GATGGGTCACAGTCGCCG 60.509 66.667 0.00 0.00 0.00 6.46
1488 2407 2.282180 TCGCCAGACCCAAAAGGC 60.282 61.111 0.00 0.00 43.61 4.35
1492 2411 1.304464 CCAGACCCAAAAGGCTCCC 60.304 63.158 0.00 0.00 40.58 4.30
1493 2412 1.675641 CAGACCCAAAAGGCTCCCG 60.676 63.158 0.00 0.00 40.58 5.14
1494 2413 2.361230 GACCCAAAAGGCTCCCGG 60.361 66.667 0.00 0.00 40.58 5.73
1495 2414 3.182996 ACCCAAAAGGCTCCCGGT 61.183 61.111 0.00 0.00 40.58 5.28
1496 2415 2.361230 CCCAAAAGGCTCCCGGTC 60.361 66.667 0.00 0.00 0.00 4.79
1497 2416 2.746277 CCAAAAGGCTCCCGGTCG 60.746 66.667 0.00 0.00 0.00 4.79
1498 2417 2.032071 CAAAAGGCTCCCGGTCGT 59.968 61.111 0.00 0.00 0.00 4.34
1499 2418 2.033194 CAAAAGGCTCCCGGTCGTC 61.033 63.158 0.00 0.00 0.00 4.20
1500 2419 3.584868 AAAAGGCTCCCGGTCGTCG 62.585 63.158 0.00 0.00 38.88 5.12
1511 2430 2.323790 GTCGTCGGACCGAGATCG 59.676 66.667 18.98 17.64 37.56 3.69
1521 2440 4.672550 CGAGATCGGTCACAGTCG 57.327 61.111 0.00 0.00 35.37 4.18
1522 2441 1.583967 CGAGATCGGTCACAGTCGC 60.584 63.158 0.00 0.00 35.37 5.19
1523 2442 1.226717 GAGATCGGTCACAGTCGCC 60.227 63.158 0.00 0.00 0.00 5.54
1524 2443 2.579787 GATCGGTCACAGTCGCCG 60.580 66.667 6.07 6.07 46.12 6.46
1525 2444 4.129737 ATCGGTCACAGTCGCCGG 62.130 66.667 11.26 0.00 44.97 6.13
1528 2447 4.736896 GGTCACAGTCGCCGGACC 62.737 72.222 5.05 0.00 44.54 4.46
1529 2448 4.736896 GTCACAGTCGCCGGACCC 62.737 72.222 5.05 0.00 44.54 4.46
1572 2491 1.297451 CGAATCCGACGACCGAGAC 60.297 63.158 0.00 0.00 41.76 3.36
1586 2505 1.433879 GAGACTGGTCATCGGACGG 59.566 63.158 3.51 0.00 45.28 4.79
1587 2506 2.005960 GAGACTGGTCATCGGACGGG 62.006 65.000 3.51 0.00 45.28 5.28
1692 2611 1.079750 GTTGCTCTCCCACGAGACC 60.080 63.158 0.00 0.00 40.34 3.85
1717 2636 4.500116 GTGTCGAGGAGCTCCGGC 62.500 72.222 26.95 20.92 42.08 6.13
1755 2677 3.593096 CAGATGCGACATGTATGCCTAT 58.407 45.455 17.23 7.39 0.00 2.57
1761 2683 2.980476 CGACATGTATGCCTATGACGAC 59.020 50.000 0.00 0.00 42.19 4.34
1785 2707 2.275318 GACAAAATCTCCTCCAGCTCG 58.725 52.381 0.00 0.00 0.00 5.03
1786 2708 1.902508 ACAAAATCTCCTCCAGCTCGA 59.097 47.619 0.00 0.00 0.00 4.04
1883 2805 2.411160 GCAAGAACTTCGTTACGCTTCC 60.411 50.000 0.00 0.00 0.00 3.46
2049 3019 2.835705 CGACGAGATGACCCTCCGG 61.836 68.421 0.00 0.00 0.00 5.14
2102 3072 0.881118 TGCAATTGGAAGGAGAACGC 59.119 50.000 7.72 0.00 0.00 4.84
2115 3085 2.420129 GGAGAACGCTAATCCATGGTGT 60.420 50.000 12.58 3.25 33.08 4.16
2290 3269 2.459934 GAAAGAAAGTTTGGTGCCACG 58.540 47.619 0.00 0.00 0.00 4.94
2386 3904 4.566488 CCAAGGATCTAAAGCTGAGGTTGT 60.566 45.833 0.00 0.00 0.00 3.32
2452 3970 3.664025 CTCCTGCCGACATTCCGCA 62.664 63.158 0.00 0.00 0.00 5.69
2454 3972 2.125552 CTGCCGACATTCCGCAGA 60.126 61.111 9.98 0.00 36.52 4.26
2457 3975 1.741770 GCCGACATTCCGCAGACTT 60.742 57.895 0.00 0.00 0.00 3.01
2523 4041 4.210304 GCTGTGGCGATCGCGAAC 62.210 66.667 31.76 29.59 43.06 3.95
2583 4101 1.380785 CCTCACCTTGGCATGCCAT 60.381 57.895 38.78 22.79 46.64 4.40
2588 4106 0.260816 ACCTTGGCATGCCATGATCT 59.739 50.000 40.11 24.84 46.64 2.75
2599 4117 5.668471 CATGCCATGATCTAGTGTATAGGG 58.332 45.833 0.00 0.00 0.00 3.53
2600 4118 4.096681 TGCCATGATCTAGTGTATAGGGG 58.903 47.826 0.00 0.00 0.00 4.79
2671 4189 1.399440 CCATCCATCTTGTCAACTGCG 59.601 52.381 0.00 0.00 0.00 5.18
2698 4216 4.109766 CAATTCTCCGAACGCATACTACA 58.890 43.478 0.00 0.00 0.00 2.74
2701 4219 2.488937 TCTCCGAACGCATACTACAACA 59.511 45.455 0.00 0.00 0.00 3.33
2757 4275 3.736482 GAGTCGGCGCTCGTTCGAT 62.736 63.158 7.64 0.00 40.32 3.59
2785 4303 3.672808 CAGAGCTCCATGAAAAGAGTGT 58.327 45.455 10.93 0.00 32.47 3.55
2800 4318 1.227556 GTGTGTCTGCAGTTCCGGT 60.228 57.895 14.67 0.00 0.00 5.28
2801 4319 1.069090 TGTGTCTGCAGTTCCGGTC 59.931 57.895 14.67 0.00 0.00 4.79
2802 4320 1.367840 GTGTCTGCAGTTCCGGTCT 59.632 57.895 14.67 0.00 0.00 3.85
2804 4322 1.367840 GTCTGCAGTTCCGGTCTGT 59.632 57.895 22.61 0.00 35.60 3.41
2805 4323 0.946221 GTCTGCAGTTCCGGTCTGTG 60.946 60.000 22.61 17.51 35.60 3.66
2823 4341 1.340889 GTGGATGCAAACTGCTTTGGA 59.659 47.619 0.00 0.00 45.31 3.53
2826 4344 2.036346 GGATGCAAACTGCTTTGGAGTT 59.964 45.455 0.00 0.00 45.31 3.01
2847 4365 2.191128 AGCTGGTCAAATTCTTCGCT 57.809 45.000 0.00 0.00 0.00 4.93
2856 4374 1.795768 AATTCTTCGCTGAGAACGCA 58.204 45.000 1.33 0.00 38.39 5.24
2875 4393 4.278170 ACGCAATGGTTCTTGAAGAAATGA 59.722 37.500 9.51 0.00 35.75 2.57
2892 4410 1.717194 TGAGTATCAACGGCGGAAAC 58.283 50.000 13.24 1.75 45.97 2.78
3011 4531 4.621747 GCCCATTAGGAGATGAATCTACCG 60.622 50.000 0.00 0.00 38.58 4.02
3122 4644 4.533222 GTCACCGTGGTTACAGAAAAATG 58.467 43.478 0.00 0.00 0.00 2.32
3127 4649 5.467735 ACCGTGGTTACAGAAAAATGTACTC 59.532 40.000 0.00 0.00 35.44 2.59
3159 4681 5.411361 CCCGGATTAATTATCGCTCAAATGA 59.589 40.000 0.73 0.00 33.82 2.57
3199 4721 6.879458 AGGGAGTAGTTAGCACTTGTATTTTG 59.121 38.462 0.00 0.00 34.06 2.44
3210 4732 5.410067 CACTTGTATTTTGGTGGCTAATGG 58.590 41.667 0.00 0.00 0.00 3.16
3211 4733 5.047377 CACTTGTATTTTGGTGGCTAATGGT 60.047 40.000 0.00 0.00 0.00 3.55
3213 4735 6.042666 ACTTGTATTTTGGTGGCTAATGGTTT 59.957 34.615 0.00 0.00 0.00 3.27
3214 4736 6.426646 TGTATTTTGGTGGCTAATGGTTTT 57.573 33.333 0.00 0.00 0.00 2.43
3241 4763 4.340950 GGTGGAAAATCAACTTTCTGACCA 59.659 41.667 10.43 0.00 37.53 4.02
3259 4781 6.550854 TCTGACCAATTTTCTCCAATTTCTGT 59.449 34.615 0.00 0.00 0.00 3.41
3262 4784 7.123355 ACCAATTTTCTCCAATTTCTGTTGA 57.877 32.000 0.00 0.00 0.00 3.18
3263 4785 7.738847 ACCAATTTTCTCCAATTTCTGTTGAT 58.261 30.769 0.00 0.00 0.00 2.57
3304 4826 3.542712 AAATGTTGCTCGTTGTGCTAG 57.457 42.857 0.00 0.00 0.00 3.42
3311 4833 2.288763 TGCTCGTTGTGCTAGTTGATCA 60.289 45.455 0.00 0.00 0.00 2.92
3364 4886 9.699703 GGTTCAAAAGCAAGTATTAAAACCATA 57.300 29.630 0.00 0.00 34.11 2.74
3386 4908 8.034215 CCATAATTTGAGGTTTTGCAGAACATA 58.966 33.333 20.43 0.57 0.00 2.29
3427 4949 5.829924 TCTGCTTTGACTTTCTTGGATTCTT 59.170 36.000 0.00 0.00 0.00 2.52
3428 4950 6.998074 TCTGCTTTGACTTTCTTGGATTCTTA 59.002 34.615 0.00 0.00 0.00 2.10
3429 4951 7.667219 TCTGCTTTGACTTTCTTGGATTCTTAT 59.333 33.333 0.00 0.00 0.00 1.73
3430 4952 7.596494 TGCTTTGACTTTCTTGGATTCTTATG 58.404 34.615 0.00 0.00 0.00 1.90
3469 4991 7.876936 TTTTATTTTGCGGGTGTATATGGTA 57.123 32.000 0.00 0.00 0.00 3.25
3477 4999 8.780846 TTGCGGGTGTATATGGTAAATATTAG 57.219 34.615 0.00 0.00 0.00 1.73
3495 5017 9.595823 AAATATTAGTGTACCATGTCTGTGTAC 57.404 33.333 0.00 0.00 36.30 2.90
3500 5022 5.048224 AGTGTACCATGTCTGTGTACTGTAC 60.048 44.000 10.98 10.98 36.63 2.90
3502 5024 2.565834 ACCATGTCTGTGTACTGTACCC 59.434 50.000 14.91 4.50 0.00 3.69
3503 5025 2.832129 CCATGTCTGTGTACTGTACCCT 59.168 50.000 14.91 0.00 0.00 4.34
3504 5026 4.021229 CCATGTCTGTGTACTGTACCCTA 58.979 47.826 14.91 1.38 0.00 3.53
3505 5027 4.649674 CCATGTCTGTGTACTGTACCCTAT 59.350 45.833 14.91 0.00 0.00 2.57
3507 5029 6.493802 CCATGTCTGTGTACTGTACCCTATAT 59.506 42.308 14.91 1.24 0.00 0.86
3510 5032 9.824216 ATGTCTGTGTACTGTACCCTATATAAT 57.176 33.333 14.91 0.00 0.00 1.28
3541 5063 6.670902 TGCCTGAAAAATACCTACTACTACCT 59.329 38.462 0.00 0.00 0.00 3.08
3558 5080 8.410912 ACTACTACCTTTTGAAATGAACAAACC 58.589 33.333 0.00 0.00 37.05 3.27
3572 5094 0.242825 CAAACCGCACGAGGTCTCTA 59.757 55.000 0.00 0.00 45.21 2.43
3574 5096 0.243095 AACCGCACGAGGTCTCTAAC 59.757 55.000 0.00 0.00 45.21 2.34
3591 5113 9.136323 GGTCTCTAACCCAATAATCAAATCAAT 57.864 33.333 0.00 0.00 42.85 2.57
3679 5201 7.555087 TCCTTTTGCACCCATCTTTAAATATG 58.445 34.615 6.60 6.60 0.00 1.78
3680 5202 6.762661 CCTTTTGCACCCATCTTTAAATATGG 59.237 38.462 20.52 20.52 42.02 2.74
3681 5203 7.364585 CCTTTTGCACCCATCTTTAAATATGGA 60.365 37.037 26.29 9.86 44.62 3.41
3682 5204 6.463995 TTGCACCCATCTTTAAATATGGAC 57.536 37.500 26.29 17.75 44.62 4.02
3683 5205 4.578516 TGCACCCATCTTTAAATATGGACG 59.421 41.667 26.29 19.01 44.62 4.79
3684 5206 4.556699 GCACCCATCTTTAAATATGGACGC 60.557 45.833 26.29 22.96 44.62 5.19
3685 5207 4.023193 CACCCATCTTTAAATATGGACGCC 60.023 45.833 26.29 0.00 44.62 5.68
3686 5208 3.188460 CCCATCTTTAAATATGGACGCCG 59.812 47.826 26.29 11.10 44.62 6.46
3687 5209 4.062293 CCATCTTTAAATATGGACGCCGA 58.938 43.478 22.19 0.00 44.62 5.54
3688 5210 4.695455 CCATCTTTAAATATGGACGCCGAT 59.305 41.667 22.19 1.02 44.62 4.18
3689 5211 5.872617 CCATCTTTAAATATGGACGCCGATA 59.127 40.000 22.19 0.00 44.62 2.92
3690 5212 6.538742 CCATCTTTAAATATGGACGCCGATAT 59.461 38.462 22.19 0.00 44.62 1.63
3691 5213 7.254455 CCATCTTTAAATATGGACGCCGATATC 60.254 40.741 22.19 0.00 44.62 1.63
3692 5214 6.103997 TCTTTAAATATGGACGCCGATATCC 58.896 40.000 0.00 0.00 35.37 2.59
3695 5217 3.134879 TGGACGCCGATATCCACC 58.865 61.111 0.00 0.00 40.17 4.61
3696 5218 1.758906 TGGACGCCGATATCCACCA 60.759 57.895 0.00 0.00 40.17 4.17
3697 5219 1.300697 GGACGCCGATATCCACCAC 60.301 63.158 0.00 0.00 34.87 4.16
3698 5220 1.440060 GACGCCGATATCCACCACA 59.560 57.895 0.00 0.00 0.00 4.17
3699 5221 0.874607 GACGCCGATATCCACCACAC 60.875 60.000 0.00 0.00 0.00 3.82
3700 5222 1.949133 CGCCGATATCCACCACACG 60.949 63.158 0.00 0.00 0.00 4.49
3701 5223 1.143183 GCCGATATCCACCACACGT 59.857 57.895 0.00 0.00 0.00 4.49
3702 5224 1.151777 GCCGATATCCACCACACGTG 61.152 60.000 15.48 15.48 42.62 4.49
3703 5225 0.174845 CCGATATCCACCACACGTGT 59.825 55.000 17.22 17.22 41.26 4.49
3704 5226 1.277326 CGATATCCACCACACGTGTG 58.723 55.000 36.13 36.13 45.23 3.82
3715 5237 2.627945 CACACGTGTGGCATAATAGGT 58.372 47.619 35.65 0.33 42.10 3.08
3716 5238 3.787785 CACACGTGTGGCATAATAGGTA 58.212 45.455 35.65 0.00 42.10 3.08
3717 5239 4.377021 CACACGTGTGGCATAATAGGTAT 58.623 43.478 35.65 0.00 42.10 2.73
3718 5240 4.814234 CACACGTGTGGCATAATAGGTATT 59.186 41.667 35.65 0.00 42.10 1.89
3719 5241 5.050363 CACACGTGTGGCATAATAGGTATTC 60.050 44.000 35.65 0.00 42.10 1.75
3720 5242 4.149922 CACGTGTGGCATAATAGGTATTCG 59.850 45.833 7.58 0.00 0.00 3.34
3721 5243 3.122948 CGTGTGGCATAATAGGTATTCGC 59.877 47.826 0.00 0.00 0.00 4.70
3722 5244 3.435671 GTGTGGCATAATAGGTATTCGCC 59.564 47.826 12.91 12.91 41.32 5.54
3723 5245 3.007635 GTGGCATAATAGGTATTCGCCC 58.992 50.000 15.51 7.60 40.74 6.13
3724 5246 2.640332 TGGCATAATAGGTATTCGCCCA 59.360 45.455 15.51 6.09 40.74 5.36
3725 5247 3.007635 GGCATAATAGGTATTCGCCCAC 58.992 50.000 10.18 0.00 37.93 4.61
3726 5248 3.558321 GGCATAATAGGTATTCGCCCACA 60.558 47.826 10.18 0.00 37.93 4.17
3727 5249 3.435671 GCATAATAGGTATTCGCCCACAC 59.564 47.826 0.00 0.00 0.00 3.82
3728 5250 4.637276 CATAATAGGTATTCGCCCACACA 58.363 43.478 0.00 0.00 0.00 3.72
3729 5251 2.614829 ATAGGTATTCGCCCACACAC 57.385 50.000 0.00 0.00 0.00 3.82
3730 5252 0.538118 TAGGTATTCGCCCACACACC 59.462 55.000 0.00 0.00 0.00 4.16
3731 5253 2.104253 GGTATTCGCCCACACACCG 61.104 63.158 0.00 0.00 0.00 4.94
3732 5254 1.375013 GTATTCGCCCACACACCGT 60.375 57.895 0.00 0.00 0.00 4.83
3733 5255 1.374885 TATTCGCCCACACACCGTG 60.375 57.895 0.00 0.00 45.92 4.94
3744 5266 3.256936 CACCGTGTGTGGCATGAG 58.743 61.111 0.00 0.00 41.52 2.90
3745 5267 2.032528 ACCGTGTGTGGCATGAGG 59.967 61.111 0.00 0.00 36.21 3.86
3746 5268 2.747460 CCGTGTGTGGCATGAGGG 60.747 66.667 0.00 0.00 36.21 4.30
3747 5269 2.747460 CGTGTGTGGCATGAGGGG 60.747 66.667 0.00 0.00 36.21 4.79
3748 5270 2.361610 GTGTGTGGCATGAGGGGG 60.362 66.667 0.00 0.00 0.00 5.40
3749 5271 2.531428 TGTGTGGCATGAGGGGGA 60.531 61.111 0.00 0.00 0.00 4.81
3750 5272 2.044946 GTGTGGCATGAGGGGGAC 60.045 66.667 0.00 0.00 0.00 4.46
3751 5273 2.531428 TGTGGCATGAGGGGGACA 60.531 61.111 0.00 0.00 0.00 4.02
3752 5274 2.273449 GTGGCATGAGGGGGACAG 59.727 66.667 0.00 0.00 0.00 3.51
3753 5275 3.731728 TGGCATGAGGGGGACAGC 61.732 66.667 0.00 0.00 0.00 4.40
3754 5276 4.512914 GGCATGAGGGGGACAGCC 62.513 72.222 0.00 0.00 34.71 4.85
3764 5286 2.426023 GGACAGCCCACACGAGTT 59.574 61.111 0.00 0.00 34.14 3.01
3765 5287 1.961277 GGACAGCCCACACGAGTTG 60.961 63.158 0.00 0.00 34.14 3.16
3766 5288 1.227556 GACAGCCCACACGAGTTGT 60.228 57.895 0.00 0.00 39.97 3.32
3775 5297 3.659850 CACGAGTTGTGTGTGGAGA 57.340 52.632 1.95 0.00 43.88 3.71
3776 5298 1.934589 CACGAGTTGTGTGTGGAGAA 58.065 50.000 1.95 0.00 43.88 2.87
3777 5299 1.593006 CACGAGTTGTGTGTGGAGAAC 59.407 52.381 1.95 0.00 43.88 3.01
3778 5300 1.206132 ACGAGTTGTGTGTGGAGAACA 59.794 47.619 0.00 0.00 36.04 3.18
3779 5301 1.860950 CGAGTTGTGTGTGGAGAACAG 59.139 52.381 0.00 0.00 40.26 3.16
3780 5302 2.738643 CGAGTTGTGTGTGGAGAACAGT 60.739 50.000 0.00 0.00 40.26 3.55
3781 5303 3.490249 CGAGTTGTGTGTGGAGAACAGTA 60.490 47.826 0.00 0.00 40.26 2.74
3782 5304 4.051922 GAGTTGTGTGTGGAGAACAGTAG 58.948 47.826 0.00 0.00 40.26 2.57
3783 5305 3.704566 AGTTGTGTGTGGAGAACAGTAGA 59.295 43.478 0.00 0.00 40.26 2.59
3784 5306 4.161565 AGTTGTGTGTGGAGAACAGTAGAA 59.838 41.667 0.00 0.00 40.26 2.10
3785 5307 4.955811 TGTGTGTGGAGAACAGTAGAAT 57.044 40.909 0.00 0.00 40.26 2.40
3786 5308 5.290493 TGTGTGTGGAGAACAGTAGAATT 57.710 39.130 0.00 0.00 40.26 2.17
3787 5309 5.056480 TGTGTGTGGAGAACAGTAGAATTG 58.944 41.667 0.00 0.00 40.26 2.32
3788 5310 4.065088 TGTGTGGAGAACAGTAGAATTGC 58.935 43.478 0.00 0.00 40.26 3.56
3789 5311 3.437049 GTGTGGAGAACAGTAGAATTGCC 59.563 47.826 0.00 0.00 40.26 4.52
3790 5312 3.010420 GTGGAGAACAGTAGAATTGCCC 58.990 50.000 0.00 0.00 0.00 5.36
3791 5313 2.642311 TGGAGAACAGTAGAATTGCCCA 59.358 45.455 0.00 0.00 0.00 5.36
3792 5314 3.010420 GGAGAACAGTAGAATTGCCCAC 58.990 50.000 0.00 0.00 0.00 4.61
3793 5315 3.559171 GGAGAACAGTAGAATTGCCCACA 60.559 47.826 0.00 0.00 0.00 4.17
3794 5316 3.412386 AGAACAGTAGAATTGCCCACAC 58.588 45.455 0.00 0.00 0.00 3.82
3795 5317 1.808411 ACAGTAGAATTGCCCACACG 58.192 50.000 0.00 0.00 0.00 4.49
3796 5318 1.071699 ACAGTAGAATTGCCCACACGT 59.928 47.619 0.00 0.00 0.00 4.49
3797 5319 1.464608 CAGTAGAATTGCCCACACGTG 59.535 52.381 15.48 15.48 0.00 4.49
3798 5320 1.071699 AGTAGAATTGCCCACACGTGT 59.928 47.619 17.22 17.22 0.00 4.49
3799 5321 1.196808 GTAGAATTGCCCACACGTGTG 59.803 52.381 36.13 36.13 45.23 3.82
3819 5341 2.432456 CGCAGCTACTTCGTGCCA 60.432 61.111 0.00 0.00 33.42 4.92
3820 5342 2.730672 CGCAGCTACTTCGTGCCAC 61.731 63.158 0.00 0.00 33.42 5.01
3821 5343 1.667830 GCAGCTACTTCGTGCCACA 60.668 57.895 0.00 0.00 0.00 4.17
3822 5344 1.901650 GCAGCTACTTCGTGCCACAC 61.902 60.000 0.00 0.00 0.00 3.82
3823 5345 0.599991 CAGCTACTTCGTGCCACACA 60.600 55.000 0.00 0.00 33.40 3.72
3824 5346 0.600255 AGCTACTTCGTGCCACACAC 60.600 55.000 0.00 0.00 46.45 3.82
3831 5353 3.609703 GTGCCACACACCCAACAA 58.390 55.556 0.00 0.00 44.02 2.83
3832 5354 1.437160 GTGCCACACACCCAACAAG 59.563 57.895 0.00 0.00 44.02 3.16
3833 5355 1.000270 TGCCACACACCCAACAAGT 60.000 52.632 0.00 0.00 0.00 3.16
3834 5356 0.256177 TGCCACACACCCAACAAGTA 59.744 50.000 0.00 0.00 0.00 2.24
3835 5357 0.666374 GCCACACACCCAACAAGTAC 59.334 55.000 0.00 0.00 0.00 2.73
3836 5358 1.749286 GCCACACACCCAACAAGTACT 60.749 52.381 0.00 0.00 0.00 2.73
3837 5359 2.485835 GCCACACACCCAACAAGTACTA 60.486 50.000 0.00 0.00 0.00 1.82
3838 5360 3.135994 CCACACACCCAACAAGTACTAC 58.864 50.000 0.00 0.00 0.00 2.73
3839 5361 3.135994 CACACACCCAACAAGTACTACC 58.864 50.000 0.00 0.00 0.00 3.18
3840 5362 2.105306 ACACACCCAACAAGTACTACCC 59.895 50.000 0.00 0.00 0.00 3.69
3841 5363 2.105134 CACACCCAACAAGTACTACCCA 59.895 50.000 0.00 0.00 0.00 4.51
3842 5364 2.983898 ACACCCAACAAGTACTACCCAT 59.016 45.455 0.00 0.00 0.00 4.00
3843 5365 3.008704 ACACCCAACAAGTACTACCCATC 59.991 47.826 0.00 0.00 0.00 3.51
3844 5366 2.574824 ACCCAACAAGTACTACCCATCC 59.425 50.000 0.00 0.00 0.00 3.51
3845 5367 2.092592 CCCAACAAGTACTACCCATCCC 60.093 54.545 0.00 0.00 0.00 3.85
3846 5368 2.092592 CCAACAAGTACTACCCATCCCC 60.093 54.545 0.00 0.00 0.00 4.81
3847 5369 2.574369 CAACAAGTACTACCCATCCCCA 59.426 50.000 0.00 0.00 0.00 4.96
3848 5370 2.193993 ACAAGTACTACCCATCCCCAC 58.806 52.381 0.00 0.00 0.00 4.61
3849 5371 1.489230 CAAGTACTACCCATCCCCACC 59.511 57.143 0.00 0.00 0.00 4.61
3850 5372 0.030399 AGTACTACCCATCCCCACCC 60.030 60.000 0.00 0.00 0.00 4.61
3851 5373 1.058428 GTACTACCCATCCCCACCCC 61.058 65.000 0.00 0.00 0.00 4.95
3852 5374 2.608745 TACTACCCATCCCCACCCCG 62.609 65.000 0.00 0.00 0.00 5.73
3853 5375 4.027731 TACCCATCCCCACCCCGT 62.028 66.667 0.00 0.00 0.00 5.28
3888 5410 2.559998 CAAAATATGCCCACACGTCC 57.440 50.000 0.00 0.00 0.00 4.79
3889 5411 2.091541 CAAAATATGCCCACACGTCCT 58.908 47.619 0.00 0.00 0.00 3.85
3890 5412 1.750193 AAATATGCCCACACGTCCTG 58.250 50.000 0.00 0.00 0.00 3.86
3891 5413 0.107214 AATATGCCCACACGTCCTGG 60.107 55.000 2.19 2.19 0.00 4.45
3892 5414 2.608970 ATATGCCCACACGTCCTGGC 62.609 60.000 10.94 10.94 44.27 4.85
3912 5434 2.132762 CGCAGCTAAAATAGGTACCCG 58.867 52.381 8.74 0.00 34.67 5.28
3913 5435 1.871676 GCAGCTAAAATAGGTACCCGC 59.128 52.381 8.74 0.30 34.67 6.13
3914 5436 2.132762 CAGCTAAAATAGGTACCCGCG 58.867 52.381 8.74 0.00 34.67 6.46
3915 5437 1.069668 AGCTAAAATAGGTACCCGCGG 59.930 52.381 21.04 21.04 34.21 6.46
3916 5438 1.875157 GCTAAAATAGGTACCCGCGGG 60.875 57.143 42.17 42.17 42.03 6.13
3926 5448 2.203015 CCCGCGGGATGACGATTT 60.203 61.111 41.82 0.00 37.50 2.17
3927 5449 1.068417 CCCGCGGGATGACGATTTA 59.932 57.895 41.82 0.00 37.50 1.40
3928 5450 0.944311 CCCGCGGGATGACGATTTAG 60.944 60.000 41.82 6.56 37.50 1.85
3929 5451 0.249322 CCGCGGGATGACGATTTAGT 60.249 55.000 20.10 0.00 35.47 2.24
3930 5452 1.567504 CGCGGGATGACGATTTAGTT 58.432 50.000 0.00 0.00 35.47 2.24
3931 5453 1.257936 CGCGGGATGACGATTTAGTTG 59.742 52.381 0.00 0.00 35.47 3.16
3932 5454 1.003866 GCGGGATGACGATTTAGTTGC 60.004 52.381 0.00 0.00 35.47 4.17
3933 5455 1.597663 CGGGATGACGATTTAGTTGCC 59.402 52.381 0.00 0.00 35.47 4.52
3934 5456 2.639065 GGGATGACGATTTAGTTGCCA 58.361 47.619 0.00 0.00 0.00 4.92
3935 5457 2.614057 GGGATGACGATTTAGTTGCCAG 59.386 50.000 0.00 0.00 0.00 4.85
3936 5458 2.032178 GGATGACGATTTAGTTGCCAGC 59.968 50.000 0.00 0.00 0.00 4.85
3937 5459 1.448985 TGACGATTTAGTTGCCAGCC 58.551 50.000 0.00 0.00 0.00 4.85
3938 5460 0.373716 GACGATTTAGTTGCCAGCCG 59.626 55.000 0.00 0.00 0.00 5.52
3939 5461 1.024579 ACGATTTAGTTGCCAGCCGG 61.025 55.000 0.00 0.00 0.00 6.13
3940 5462 0.742990 CGATTTAGTTGCCAGCCGGA 60.743 55.000 5.05 0.00 0.00 5.14
3941 5463 1.680338 GATTTAGTTGCCAGCCGGAT 58.320 50.000 5.05 0.00 0.00 4.18
3942 5464 1.334869 GATTTAGTTGCCAGCCGGATG 59.665 52.381 14.18 14.18 0.00 3.51
3943 5465 0.679640 TTTAGTTGCCAGCCGGATGG 60.680 55.000 34.54 34.54 43.72 3.51
3956 5478 3.685139 CCGGATGGCAGATGTAGTTAT 57.315 47.619 0.00 0.00 0.00 1.89
3957 5479 3.589988 CCGGATGGCAGATGTAGTTATC 58.410 50.000 0.00 0.00 0.00 1.75
3958 5480 3.589988 CGGATGGCAGATGTAGTTATCC 58.410 50.000 0.00 0.00 0.00 2.59
3959 5481 3.589988 GGATGGCAGATGTAGTTATCCG 58.410 50.000 0.00 0.00 0.00 4.18
3960 5482 3.589988 GATGGCAGATGTAGTTATCCGG 58.410 50.000 0.00 0.00 0.00 5.14
3961 5483 1.691976 TGGCAGATGTAGTTATCCGGG 59.308 52.381 0.00 0.00 0.00 5.73
3962 5484 1.968493 GGCAGATGTAGTTATCCGGGA 59.032 52.381 0.00 0.00 0.00 5.14
3963 5485 2.567615 GGCAGATGTAGTTATCCGGGAT 59.432 50.000 15.04 15.04 0.00 3.85
3964 5486 3.589988 GCAGATGTAGTTATCCGGGATG 58.410 50.000 19.82 1.18 0.00 3.51
3965 5487 3.617531 GCAGATGTAGTTATCCGGGATGG 60.618 52.174 19.82 0.00 40.09 3.51
3966 5488 2.567615 AGATGTAGTTATCCGGGATGGC 59.432 50.000 19.82 11.51 37.80 4.40
3967 5489 0.677288 TGTAGTTATCCGGGATGGCG 59.323 55.000 19.82 0.00 37.80 5.69
3968 5490 0.963962 GTAGTTATCCGGGATGGCGA 59.036 55.000 19.82 5.69 37.80 5.54
3969 5491 1.342174 GTAGTTATCCGGGATGGCGAA 59.658 52.381 19.82 2.76 37.80 4.70
3970 5492 1.056660 AGTTATCCGGGATGGCGAAT 58.943 50.000 19.82 0.00 37.80 3.34
3971 5493 2.253610 AGTTATCCGGGATGGCGAATA 58.746 47.619 19.82 0.00 37.80 1.75
3972 5494 2.838202 AGTTATCCGGGATGGCGAATAT 59.162 45.455 19.82 0.00 37.80 1.28
3973 5495 2.936498 GTTATCCGGGATGGCGAATATG 59.064 50.000 19.82 0.00 37.80 1.78
3974 5496 0.253044 ATCCGGGATGGCGAATATGG 59.747 55.000 9.17 0.00 37.80 2.74
3975 5497 1.125093 TCCGGGATGGCGAATATGGT 61.125 55.000 0.00 0.00 37.80 3.55
3976 5498 0.250727 CCGGGATGGCGAATATGGTT 60.251 55.000 0.00 0.00 0.00 3.67
3977 5499 0.874390 CGGGATGGCGAATATGGTTG 59.126 55.000 0.00 0.00 0.00 3.77
3978 5500 1.813862 CGGGATGGCGAATATGGTTGT 60.814 52.381 0.00 0.00 0.00 3.32
3979 5501 2.549134 CGGGATGGCGAATATGGTTGTA 60.549 50.000 0.00 0.00 0.00 2.41
3980 5502 3.482436 GGGATGGCGAATATGGTTGTAA 58.518 45.455 0.00 0.00 0.00 2.41
3981 5503 3.886505 GGGATGGCGAATATGGTTGTAAA 59.113 43.478 0.00 0.00 0.00 2.01
3982 5504 4.339814 GGGATGGCGAATATGGTTGTAAAA 59.660 41.667 0.00 0.00 0.00 1.52
3983 5505 5.507315 GGGATGGCGAATATGGTTGTAAAAG 60.507 44.000 0.00 0.00 0.00 2.27
3984 5506 4.364415 TGGCGAATATGGTTGTAAAAGC 57.636 40.909 0.00 0.00 0.00 3.51
3985 5507 3.759086 TGGCGAATATGGTTGTAAAAGCA 59.241 39.130 0.00 0.00 34.42 3.91
3986 5508 4.102649 GGCGAATATGGTTGTAAAAGCAC 58.897 43.478 0.00 0.00 32.55 4.40
3987 5509 3.783943 GCGAATATGGTTGTAAAAGCACG 59.216 43.478 0.00 0.60 32.55 5.34
3988 5510 4.339429 CGAATATGGTTGTAAAAGCACGG 58.661 43.478 0.00 0.00 32.55 4.94
3989 5511 3.775661 ATATGGTTGTAAAAGCACGGC 57.224 42.857 0.00 0.00 32.55 5.68
3990 5512 1.323412 ATGGTTGTAAAAGCACGGCA 58.677 45.000 0.00 0.00 32.55 5.69
3991 5513 1.103803 TGGTTGTAAAAGCACGGCAA 58.896 45.000 0.00 0.00 0.00 4.52
3992 5514 1.202313 TGGTTGTAAAAGCACGGCAAC 60.202 47.619 0.00 0.00 38.78 4.17
3993 5515 1.066454 GGTTGTAAAAGCACGGCAACT 59.934 47.619 0.00 0.00 39.28 3.16
3994 5516 2.381589 GTTGTAAAAGCACGGCAACTC 58.618 47.619 0.00 0.00 37.17 3.01
3995 5517 1.961793 TGTAAAAGCACGGCAACTCT 58.038 45.000 0.00 0.00 0.00 3.24
3996 5518 1.871039 TGTAAAAGCACGGCAACTCTC 59.129 47.619 0.00 0.00 0.00 3.20
3997 5519 2.143925 GTAAAAGCACGGCAACTCTCT 58.856 47.619 0.00 0.00 0.00 3.10
3998 5520 2.543777 AAAAGCACGGCAACTCTCTA 57.456 45.000 0.00 0.00 0.00 2.43
3999 5521 2.770164 AAAGCACGGCAACTCTCTAT 57.230 45.000 0.00 0.00 0.00 1.98
4000 5522 2.015736 AAGCACGGCAACTCTCTATG 57.984 50.000 0.00 0.00 0.00 2.23
4001 5523 0.898320 AGCACGGCAACTCTCTATGT 59.102 50.000 0.00 0.00 0.00 2.29
4002 5524 1.276421 AGCACGGCAACTCTCTATGTT 59.724 47.619 0.00 0.00 0.00 2.71
4003 5525 2.076863 GCACGGCAACTCTCTATGTTT 58.923 47.619 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.163788 GTTTGTCGTCATGTGCCTCG 59.836 55.000 0.00 0.00 0.00 4.63
13 14 0.098728 CCATTCCCATCGCGTTTGTC 59.901 55.000 5.77 0.00 0.00 3.18
37 38 1.132640 GCCGAGTCGTGCATTGTTC 59.867 57.895 17.55 0.00 0.00 3.18
128 129 3.061848 CCGTCATTGCCCCCACAC 61.062 66.667 0.00 0.00 0.00 3.82
151 153 2.813179 GCATACACGCTGCCTTCGG 61.813 63.158 0.00 0.00 33.44 4.30
166 168 1.270550 GCACAACTAACAGCCAAGCAT 59.729 47.619 0.00 0.00 0.00 3.79
178 180 2.749839 GCCATGCCCGCACAACTA 60.750 61.111 0.00 0.00 0.00 2.24
263 289 3.065233 GCATCGGCAACAATCAGTGAATA 59.935 43.478 0.00 0.00 40.72 1.75
302 506 0.178767 CTGCATCCATCCCTCGTGAA 59.821 55.000 0.00 0.00 0.00 3.18
319 524 8.489990 AGCGTACATATACCTATACACTACTG 57.510 38.462 0.00 0.00 0.00 2.74
322 527 8.239314 GCAAAGCGTACATATACCTATACACTA 58.761 37.037 0.00 0.00 0.00 2.74
359 564 7.095523 CCCTCAAAAACACATAAAAGAGCATTG 60.096 37.037 0.00 0.00 0.00 2.82
373 578 2.363038 GGTACAACCCCCTCAAAAACAC 59.637 50.000 0.00 0.00 30.04 3.32
419 631 2.744741 TCTTATGTGCGCCATTCGAAAA 59.255 40.909 15.07 4.41 41.67 2.29
423 635 1.004610 CACTCTTATGTGCGCCATTCG 60.005 52.381 15.07 8.16 42.12 3.34
433 645 5.401531 ACCGTACATTGTCACTCTTATGT 57.598 39.130 0.00 0.00 35.55 2.29
459 671 0.683828 TGCCAATCAATGCCATCCGT 60.684 50.000 0.00 0.00 0.00 4.69
466 678 3.444916 CAGATTCAGTGCCAATCAATGC 58.555 45.455 7.17 0.00 40.34 3.56
549 762 4.934989 GGGAGCCGACGAGAAAAT 57.065 55.556 0.00 0.00 0.00 1.82
578 796 1.400142 CAATAAATCCACGCGCCTGAA 59.600 47.619 5.73 0.00 0.00 3.02
579 797 1.013596 CAATAAATCCACGCGCCTGA 58.986 50.000 5.73 0.00 0.00 3.86
580 798 0.732571 ACAATAAATCCACGCGCCTG 59.267 50.000 5.73 0.00 0.00 4.85
581 799 1.459450 AACAATAAATCCACGCGCCT 58.541 45.000 5.73 0.00 0.00 5.52
583 801 5.942325 ATAAAAACAATAAATCCACGCGC 57.058 34.783 5.73 0.00 0.00 6.86
584 802 8.775220 TCATATAAAAACAATAAATCCACGCG 57.225 30.769 3.53 3.53 0.00 6.01
628 846 2.030457 GCAAGCGCAAGACAACGTATAT 59.970 45.455 11.47 0.00 43.02 0.86
632 850 2.327940 GCAAGCGCAAGACAACGT 59.672 55.556 11.47 0.00 43.02 3.99
633 851 2.427410 GGCAAGCGCAAGACAACG 60.427 61.111 11.47 0.00 41.24 4.10
634 852 1.081840 GAGGCAAGCGCAAGACAAC 60.082 57.895 11.47 0.00 41.24 3.32
635 853 2.260869 GGAGGCAAGCGCAAGACAA 61.261 57.895 11.47 0.00 41.24 3.18
648 927 4.320567 GCAAAGTGAGAACTTTAAGGAGGC 60.321 45.833 3.69 0.00 37.80 4.70
654 934 4.510340 GGTCGAGCAAAGTGAGAACTTTAA 59.490 41.667 10.30 0.00 37.80 1.52
659 939 1.149148 GGGTCGAGCAAAGTGAGAAC 58.851 55.000 17.59 0.00 0.00 3.01
660 940 0.319555 CGGGTCGAGCAAAGTGAGAA 60.320 55.000 17.59 0.00 0.00 2.87
663 943 1.529152 TAGCGGGTCGAGCAAAGTGA 61.529 55.000 17.59 0.00 37.01 3.41
697 977 7.201266 CGAAAGAAAAAGTTTAAGATGCCATCG 60.201 37.037 0.00 0.00 0.00 3.84
720 1000 0.525311 TACCCGTGCGTTGTATCGAA 59.475 50.000 0.00 0.00 0.00 3.71
721 1001 0.179166 GTACCCGTGCGTTGTATCGA 60.179 55.000 0.00 0.00 0.00 3.59
724 1004 2.389962 AATGTACCCGTGCGTTGTAT 57.610 45.000 0.00 0.00 0.00 2.29
726 1006 2.166821 TAAATGTACCCGTGCGTTGT 57.833 45.000 0.00 0.00 0.00 3.32
738 1018 8.424918 TGCAAGGGAAAACAAATCTTAAATGTA 58.575 29.630 0.00 0.00 0.00 2.29
746 1026 4.162131 ACAACTGCAAGGGAAAACAAATCT 59.838 37.500 0.00 0.00 39.30 2.40
747 1027 4.441792 ACAACTGCAAGGGAAAACAAATC 58.558 39.130 0.00 0.00 39.30 2.17
748 1028 4.486125 ACAACTGCAAGGGAAAACAAAT 57.514 36.364 0.00 0.00 39.30 2.32
749 1029 3.971245 ACAACTGCAAGGGAAAACAAA 57.029 38.095 0.00 0.00 39.30 2.83
750 1030 4.464597 AGTTACAACTGCAAGGGAAAACAA 59.535 37.500 0.00 0.00 39.30 2.83
751 1031 4.020543 AGTTACAACTGCAAGGGAAAACA 58.979 39.130 0.00 0.00 39.30 2.83
752 1032 4.649088 AGTTACAACTGCAAGGGAAAAC 57.351 40.909 0.00 0.00 39.30 2.43
753 1033 5.186021 TCAAAGTTACAACTGCAAGGGAAAA 59.814 36.000 0.00 0.00 39.66 2.29
754 1034 4.707448 TCAAAGTTACAACTGCAAGGGAAA 59.293 37.500 0.00 0.00 39.66 3.13
755 1035 4.097286 GTCAAAGTTACAACTGCAAGGGAA 59.903 41.667 0.00 0.00 39.66 3.97
756 1036 3.630312 GTCAAAGTTACAACTGCAAGGGA 59.370 43.478 0.00 0.00 39.66 4.20
757 1037 3.632145 AGTCAAAGTTACAACTGCAAGGG 59.368 43.478 0.00 0.00 39.66 3.95
758 1038 4.900635 AGTCAAAGTTACAACTGCAAGG 57.099 40.909 0.00 0.00 39.66 3.61
759 1039 6.092748 ACAAAGTCAAAGTTACAACTGCAAG 58.907 36.000 0.00 0.00 39.66 4.01
760 1040 6.019779 ACAAAGTCAAAGTTACAACTGCAA 57.980 33.333 0.00 0.00 39.66 4.08
761 1041 5.637006 ACAAAGTCAAAGTTACAACTGCA 57.363 34.783 0.00 0.00 39.66 4.41
762 1042 9.166126 GTATTACAAAGTCAAAGTTACAACTGC 57.834 33.333 0.00 0.00 39.66 4.40
763 1043 9.365311 CGTATTACAAAGTCAAAGTTACAACTG 57.635 33.333 0.00 0.00 39.66 3.16
779 1059 0.394625 GGCTGGCCCCGTATTACAAA 60.395 55.000 0.00 0.00 0.00 2.83
793 1073 2.884179 ATTCATTGGGCCTGGGCTGG 62.884 60.000 20.47 7.36 41.60 4.85
794 1074 1.382146 ATTCATTGGGCCTGGGCTG 60.382 57.895 20.47 10.79 41.60 4.85
831 1111 2.113433 GCTGCATCTCAGGCCACAG 61.113 63.158 5.01 0.00 43.06 3.66
833 1113 3.200593 CGCTGCATCTCAGGCCAC 61.201 66.667 5.01 0.00 43.06 5.01
890 1170 8.897809 TGCGTACAATTTTTCTTTTTAGAATCG 58.102 29.630 0.00 0.00 0.00 3.34
901 1181 2.223745 ACGGGTGCGTACAATTTTTCT 58.776 42.857 5.86 0.00 0.00 2.52
908 1188 2.030862 GGGAACGGGTGCGTACAA 59.969 61.111 5.86 0.00 0.00 2.41
925 1205 2.674220 GGGACTTCAGGGAGGGCAG 61.674 68.421 0.00 0.00 0.00 4.85
926 1206 2.610859 GGGACTTCAGGGAGGGCA 60.611 66.667 0.00 0.00 0.00 5.36
927 1207 1.575447 ATTGGGACTTCAGGGAGGGC 61.575 60.000 0.00 0.00 0.00 5.19
928 1208 1.002857 AATTGGGACTTCAGGGAGGG 58.997 55.000 0.00 0.00 0.00 4.30
929 1209 1.064389 GGAATTGGGACTTCAGGGAGG 60.064 57.143 0.00 0.00 0.00 4.30
930 1210 1.635487 TGGAATTGGGACTTCAGGGAG 59.365 52.381 0.00 0.00 0.00 4.30
931 1211 1.753903 TGGAATTGGGACTTCAGGGA 58.246 50.000 0.00 0.00 0.00 4.20
932 1212 2.659428 GATGGAATTGGGACTTCAGGG 58.341 52.381 0.00 0.00 0.00 4.45
933 1213 2.292267 CGATGGAATTGGGACTTCAGG 58.708 52.381 0.00 0.00 0.00 3.86
934 1214 2.292267 CCGATGGAATTGGGACTTCAG 58.708 52.381 0.00 0.00 44.70 3.02
935 1215 2.418368 CCGATGGAATTGGGACTTCA 57.582 50.000 0.00 0.00 44.70 3.02
965 1245 0.385348 CGATGCGATCTCGACCTCAG 60.385 60.000 3.33 0.00 43.02 3.35
1314 1603 5.895534 AGATCCGTAGTTACCCATGAAGTTA 59.104 40.000 0.00 0.00 0.00 2.24
1328 1617 6.902771 ACTTCATTATGCTAGATCCGTAGT 57.097 37.500 0.00 0.00 0.00 2.73
1337 1626 6.674694 AGTGCAGAAACTTCATTATGCTAG 57.325 37.500 7.95 0.00 45.33 3.42
1347 1636 2.094417 GCGGTCATAGTGCAGAAACTTC 59.906 50.000 0.00 0.00 0.00 3.01
1481 2400 2.032071 ACGACCGGGAGCCTTTTG 59.968 61.111 6.32 0.00 0.00 2.44
1494 2413 2.323790 CGATCTCGGTCCGACGAC 59.676 66.667 10.71 3.44 38.06 4.34
1504 2423 1.583967 GCGACTGTGACCGATCTCG 60.584 63.158 0.00 0.00 39.44 4.04
1505 2424 1.226717 GGCGACTGTGACCGATCTC 60.227 63.158 0.00 0.00 0.00 2.75
1506 2425 2.885861 GGCGACTGTGACCGATCT 59.114 61.111 0.00 0.00 0.00 2.75
1511 2430 4.736896 GGTCCGGCGACTGTGACC 62.737 72.222 9.30 12.80 40.40 4.02
1512 2431 4.736896 GGGTCCGGCGACTGTGAC 62.737 72.222 9.30 6.58 39.15 3.67
1516 2435 4.323477 TTTGGGGTCCGGCGACTG 62.323 66.667 9.30 0.00 39.15 3.51
1517 2436 4.016706 CTTTGGGGTCCGGCGACT 62.017 66.667 9.30 0.00 39.15 4.18
1527 2446 4.426313 GACCGGGAGCCTTTGGGG 62.426 72.222 6.32 0.00 38.36 4.96
1528 2447 4.778143 CGACCGGGAGCCTTTGGG 62.778 72.222 6.32 0.00 0.00 4.12
1529 2448 3.952628 GACGACCGGGAGCCTTTGG 62.953 68.421 6.32 0.00 0.00 3.28
1530 2449 2.434359 GACGACCGGGAGCCTTTG 60.434 66.667 6.32 0.00 0.00 2.77
1531 2450 4.065281 CGACGACCGGGAGCCTTT 62.065 66.667 6.32 0.00 33.91 3.11
1551 2470 2.646862 CGGTCGTCGGATTCGTCG 60.647 66.667 6.71 6.71 45.99 5.12
1557 2476 2.113433 CCAGTCTCGGTCGTCGGAT 61.113 63.158 0.00 0.00 39.77 4.18
1572 2491 2.298158 CTTCCCCGTCCGATGACCAG 62.298 65.000 0.00 0.00 38.32 4.00
1578 2497 2.762875 GACCCTTCCCCGTCCGAT 60.763 66.667 0.00 0.00 0.00 4.18
1587 2506 0.689412 CCTGAGAGAGGGACCCTTCC 60.689 65.000 16.22 9.74 41.95 3.46
1604 2523 2.442272 CTGACCCGTCCCGATCCT 60.442 66.667 0.00 0.00 0.00 3.24
1610 2529 4.131088 GCGAGACTGACCCGTCCC 62.131 72.222 0.00 0.00 34.46 4.46
1611 2530 4.131088 GGCGAGACTGACCCGTCC 62.131 72.222 0.00 0.00 34.46 4.79
1615 2534 4.131088 GTCCGGCGAGACTGACCC 62.131 72.222 9.30 0.00 33.79 4.46
1648 2567 4.351938 CACGTCTGGGTTCGGCGA 62.352 66.667 4.99 4.99 0.00 5.54
1654 2573 4.681978 GCCGAGCACGTCTGGGTT 62.682 66.667 14.22 0.00 42.13 4.11
1717 2636 0.987715 CTGCAGTCATTCACGACGAG 59.012 55.000 5.25 0.00 40.98 4.18
1724 2643 1.338011 TGTCGCATCTGCAGTCATTCA 60.338 47.619 14.67 5.03 42.21 2.57
1755 2677 2.313234 GAGATTTTGTCGTCGTCGTCA 58.687 47.619 1.33 0.00 38.33 4.35
1761 2683 2.263077 CTGGAGGAGATTTTGTCGTCG 58.737 52.381 0.00 0.00 30.99 5.12
1785 2707 0.537188 TCAAGATGCCTTCCGACCTC 59.463 55.000 0.00 0.00 0.00 3.85
1786 2708 0.539051 CTCAAGATGCCTTCCGACCT 59.461 55.000 0.00 0.00 0.00 3.85
1842 2764 2.954753 GCCGGTGAGTTCAAGCACG 61.955 63.158 1.90 0.00 35.91 5.34
1883 2805 3.499737 CTAACTTGGCTGCCCGCG 61.500 66.667 17.53 0.00 40.44 6.46
2055 3025 1.492873 CACGATCACGGTTGCTGTG 59.507 57.895 1.92 1.92 44.46 3.66
2115 3085 0.464735 CCTCGGGTTTGTTGTGGACA 60.465 55.000 0.00 0.00 36.19 4.02
2308 3287 2.041115 CGAGGTCGAGCTCTCCACA 61.041 63.158 34.34 0.00 43.02 4.17
2386 3904 2.805546 GATGTGCTCGAGGGCGTA 59.194 61.111 15.58 0.00 38.98 4.42
2442 3960 0.723981 GCTCAAGTCTGCGGAATGTC 59.276 55.000 0.00 0.00 0.00 3.06
2452 3970 2.977178 CTCCAGGCGCTCAAGTCT 59.023 61.111 7.64 0.00 0.00 3.24
2548 4066 1.902508 GAGGTTGATGTGGAGGTCAGA 59.097 52.381 0.00 0.00 0.00 3.27
2549 4067 1.625315 TGAGGTTGATGTGGAGGTCAG 59.375 52.381 0.00 0.00 0.00 3.51
2583 4101 3.572682 CGCAACCCCTATACACTAGATCA 59.427 47.826 0.00 0.00 0.00 2.92
2588 4106 2.099592 CGTTCGCAACCCCTATACACTA 59.900 50.000 0.00 0.00 0.00 2.74
2599 4117 1.511254 GAAATCGGCGTTCGCAACC 60.511 57.895 18.46 1.08 39.05 3.77
2600 4118 0.789383 CAGAAATCGGCGTTCGCAAC 60.789 55.000 18.46 1.77 39.05 4.17
2671 4189 2.791927 GTTCGGAGAATTGCGGCC 59.208 61.111 0.00 0.00 45.90 6.13
2698 4216 2.158813 CCTCACCACACCTAGTGTTGTT 60.159 50.000 2.15 0.00 45.08 2.83
2701 4219 0.396811 GCCTCACCACACCTAGTGTT 59.603 55.000 0.00 0.00 45.08 3.32
2715 4233 0.398239 CAGGGATCTCAGAGGCCTCA 60.398 60.000 33.90 14.51 0.00 3.86
2778 4296 1.539065 CGGAACTGCAGACACACTCTT 60.539 52.381 23.35 0.26 0.00 2.85
2785 4303 1.367471 CAGACCGGAACTGCAGACA 59.633 57.895 23.35 0.00 0.00 3.41
2823 4341 4.083271 GCGAAGAATTTGACCAGCTTAACT 60.083 41.667 0.00 0.00 0.00 2.24
2826 4344 3.436704 CAGCGAAGAATTTGACCAGCTTA 59.563 43.478 0.00 0.00 0.00 3.09
2856 4374 8.868522 TGATACTCATTTCTTCAAGAACCATT 57.131 30.769 0.00 0.00 33.26 3.16
2875 4393 0.244450 TCGTTTCCGCCGTTGATACT 59.756 50.000 0.00 0.00 0.00 2.12
2881 4399 0.531311 AACTTCTCGTTTCCGCCGTT 60.531 50.000 0.00 0.00 29.63 4.44
2886 4404 1.866925 GCCCAACTTCTCGTTTCCG 59.133 57.895 0.00 0.00 32.27 4.30
2892 4410 2.048222 TGCTCGCCCAACTTCTCG 60.048 61.111 0.00 0.00 0.00 4.04
2979 4499 1.813753 CCTAATGGGCACGACCACG 60.814 63.158 0.00 0.00 44.72 4.94
3020 4540 7.162082 GCCACACATAATAGAGGCTAACTTAT 58.838 38.462 0.00 0.00 39.02 1.73
3150 4672 8.660373 CCTCCGTTTAGATATATTCATTTGAGC 58.340 37.037 0.00 0.00 0.00 4.26
3159 4681 8.953223 AACTACTCCCTCCGTTTAGATATATT 57.047 34.615 0.00 0.00 0.00 1.28
3164 4686 4.583907 GCTAACTACTCCCTCCGTTTAGAT 59.416 45.833 0.00 0.00 0.00 1.98
3166 4688 3.698040 TGCTAACTACTCCCTCCGTTTAG 59.302 47.826 0.00 0.00 0.00 1.85
3167 4689 3.445096 GTGCTAACTACTCCCTCCGTTTA 59.555 47.826 0.00 0.00 0.00 2.01
3169 4691 1.823610 GTGCTAACTACTCCCTCCGTT 59.176 52.381 0.00 0.00 0.00 4.44
3170 4692 1.005687 AGTGCTAACTACTCCCTCCGT 59.994 52.381 0.00 0.00 33.79 4.69
3171 4693 1.765230 AGTGCTAACTACTCCCTCCG 58.235 55.000 0.00 0.00 33.79 4.63
3199 4721 1.824852 CCCTCAAAACCATTAGCCACC 59.175 52.381 0.00 0.00 0.00 4.61
3210 4732 5.276461 AGTTGATTTTCCACCCTCAAAAC 57.724 39.130 0.00 0.00 30.06 2.43
3211 4733 5.948742 AAGTTGATTTTCCACCCTCAAAA 57.051 34.783 0.00 0.00 30.06 2.44
3213 4735 5.068987 CAGAAAGTTGATTTTCCACCCTCAA 59.931 40.000 0.00 0.00 37.70 3.02
3214 4736 4.584325 CAGAAAGTTGATTTTCCACCCTCA 59.416 41.667 0.00 0.00 37.70 3.86
3304 4826 7.988737 TGACATATCTGGTTTCAATGATCAAC 58.011 34.615 0.00 0.00 0.00 3.18
3338 4860 8.601845 ATGGTTTTAATACTTGCTTTTGAACC 57.398 30.769 0.00 0.00 34.80 3.62
3364 4886 8.907222 ATTTATGTTCTGCAAAACCTCAAATT 57.093 26.923 0.00 0.00 0.00 1.82
3368 4890 5.538053 TGGATTTATGTTCTGCAAAACCTCA 59.462 36.000 0.00 0.00 0.00 3.86
3447 4969 7.876936 TTTACCATATACACCCGCAAAATAA 57.123 32.000 0.00 0.00 0.00 1.40
3477 4999 8.720311 GGGTACAGTACACAGACATGGTACAC 62.720 50.000 12.89 0.00 36.41 2.90
3495 5017 5.932303 GGCACACACATTATATAGGGTACAG 59.068 44.000 0.00 0.00 0.00 2.74
3500 5022 5.227569 TCAGGCACACACATTATATAGGG 57.772 43.478 0.00 0.00 0.00 3.53
3504 5026 8.413229 GGTATTTTTCAGGCACACACATTATAT 58.587 33.333 0.00 0.00 0.00 0.86
3505 5027 7.613801 AGGTATTTTTCAGGCACACACATTATA 59.386 33.333 0.00 0.00 0.00 0.98
3507 5029 5.772672 AGGTATTTTTCAGGCACACACATTA 59.227 36.000 0.00 0.00 0.00 1.90
3510 5032 3.561143 AGGTATTTTTCAGGCACACACA 58.439 40.909 0.00 0.00 0.00 3.72
3541 5063 3.304559 CGTGCGGTTTGTTCATTTCAAAA 59.695 39.130 0.00 0.00 36.71 2.44
3558 5080 4.787999 GGTTAGAGACCTCGTGCG 57.212 61.111 0.00 0.00 45.55 5.34
3572 5094 7.047271 CCCGAAATTGATTTGATTATTGGGTT 58.953 34.615 0.00 0.00 0.00 4.11
3574 5096 6.581712 ACCCGAAATTGATTTGATTATTGGG 58.418 36.000 0.00 0.00 36.47 4.12
3576 5098 9.030301 GGTTACCCGAAATTGATTTGATTATTG 57.970 33.333 0.00 0.00 0.00 1.90
3649 5171 4.541973 AGATGGGTGCAAAAGGAAAATC 57.458 40.909 0.00 0.00 0.00 2.17
3655 5177 6.762661 CCATATTTAAAGATGGGTGCAAAAGG 59.237 38.462 27.28 4.48 42.61 3.11
3656 5178 7.492344 GTCCATATTTAAAGATGGGTGCAAAAG 59.508 37.037 31.63 11.23 45.54 2.27
3679 5201 1.300697 GTGGTGGATATCGGCGTCC 60.301 63.158 6.85 7.52 35.02 4.79
3680 5202 0.874607 GTGTGGTGGATATCGGCGTC 60.875 60.000 6.85 0.00 0.00 5.19
3681 5203 1.143183 GTGTGGTGGATATCGGCGT 59.857 57.895 6.85 0.00 0.00 5.68
3682 5204 1.949133 CGTGTGGTGGATATCGGCG 60.949 63.158 0.00 0.00 0.00 6.46
3683 5205 1.143183 ACGTGTGGTGGATATCGGC 59.857 57.895 0.00 0.00 0.00 5.54
3684 5206 2.971997 CACGTGTGGTGGATATCGG 58.028 57.895 7.58 0.00 43.16 4.18
3695 5217 2.627945 ACCTATTATGCCACACGTGTG 58.372 47.619 36.13 36.13 45.23 3.82
3696 5218 4.682778 ATACCTATTATGCCACACGTGT 57.317 40.909 17.22 17.22 0.00 4.49
3697 5219 4.149922 CGAATACCTATTATGCCACACGTG 59.850 45.833 15.48 15.48 0.00 4.49
3698 5220 4.304110 CGAATACCTATTATGCCACACGT 58.696 43.478 0.00 0.00 0.00 4.49
3699 5221 3.122948 GCGAATACCTATTATGCCACACG 59.877 47.826 0.00 0.00 0.00 4.49
3700 5222 3.435671 GGCGAATACCTATTATGCCACAC 59.564 47.826 12.67 0.00 42.40 3.82
3701 5223 3.558321 GGGCGAATACCTATTATGCCACA 60.558 47.826 16.75 0.00 43.58 4.17
3702 5224 3.007635 GGGCGAATACCTATTATGCCAC 58.992 50.000 16.75 7.64 43.58 5.01
3703 5225 2.640332 TGGGCGAATACCTATTATGCCA 59.360 45.455 16.75 0.00 43.58 4.92
3704 5226 3.007635 GTGGGCGAATACCTATTATGCC 58.992 50.000 10.39 10.39 42.25 4.40
3705 5227 3.435671 GTGTGGGCGAATACCTATTATGC 59.564 47.826 0.00 0.00 0.00 3.14
3706 5228 4.451096 GTGTGTGGGCGAATACCTATTATG 59.549 45.833 0.00 0.00 0.00 1.90
3707 5229 4.504340 GGTGTGTGGGCGAATACCTATTAT 60.504 45.833 0.00 0.00 0.00 1.28
3708 5230 3.181463 GGTGTGTGGGCGAATACCTATTA 60.181 47.826 0.00 0.00 0.00 0.98
3709 5231 2.420967 GGTGTGTGGGCGAATACCTATT 60.421 50.000 0.00 0.00 0.00 1.73
3710 5232 1.140252 GGTGTGTGGGCGAATACCTAT 59.860 52.381 0.00 0.00 0.00 2.57
3711 5233 0.538118 GGTGTGTGGGCGAATACCTA 59.462 55.000 0.00 0.00 0.00 3.08
3712 5234 1.298667 GGTGTGTGGGCGAATACCT 59.701 57.895 0.00 0.00 0.00 3.08
3713 5235 2.104253 CGGTGTGTGGGCGAATACC 61.104 63.158 0.00 0.00 0.00 2.73
3714 5236 1.375013 ACGGTGTGTGGGCGAATAC 60.375 57.895 0.00 0.00 0.00 1.89
3715 5237 1.374885 CACGGTGTGTGGGCGAATA 60.375 57.895 0.00 0.00 45.21 1.75
3716 5238 2.668212 CACGGTGTGTGGGCGAAT 60.668 61.111 0.00 0.00 45.21 3.34
3728 5250 2.032528 CCTCATGCCACACACGGT 59.967 61.111 0.00 0.00 0.00 4.83
3729 5251 2.747460 CCCTCATGCCACACACGG 60.747 66.667 0.00 0.00 0.00 4.94
3730 5252 2.747460 CCCCTCATGCCACACACG 60.747 66.667 0.00 0.00 0.00 4.49
3731 5253 2.361610 CCCCCTCATGCCACACAC 60.362 66.667 0.00 0.00 0.00 3.82
3732 5254 2.531428 TCCCCCTCATGCCACACA 60.531 61.111 0.00 0.00 0.00 3.72
3733 5255 2.044946 GTCCCCCTCATGCCACAC 60.045 66.667 0.00 0.00 0.00 3.82
3734 5256 2.531428 TGTCCCCCTCATGCCACA 60.531 61.111 0.00 0.00 0.00 4.17
3735 5257 2.273449 CTGTCCCCCTCATGCCAC 59.727 66.667 0.00 0.00 0.00 5.01
3736 5258 3.731728 GCTGTCCCCCTCATGCCA 61.732 66.667 0.00 0.00 0.00 4.92
3737 5259 4.512914 GGCTGTCCCCCTCATGCC 62.513 72.222 0.00 0.00 0.00 4.40
3747 5269 1.961277 CAACTCGTGTGGGCTGTCC 60.961 63.158 0.00 0.00 0.00 4.02
3748 5270 1.227556 ACAACTCGTGTGGGCTGTC 60.228 57.895 0.00 0.00 39.72 3.51
3749 5271 2.908015 ACAACTCGTGTGGGCTGT 59.092 55.556 0.00 0.00 39.72 4.40
3758 5280 1.206132 TGTTCTCCACACACAACTCGT 59.794 47.619 0.00 0.00 0.00 4.18
3759 5281 1.860950 CTGTTCTCCACACACAACTCG 59.139 52.381 0.00 0.00 0.00 4.18
3760 5282 2.906354 ACTGTTCTCCACACACAACTC 58.094 47.619 0.00 0.00 0.00 3.01
3761 5283 3.704566 TCTACTGTTCTCCACACACAACT 59.295 43.478 0.00 0.00 0.00 3.16
3762 5284 4.054780 TCTACTGTTCTCCACACACAAC 57.945 45.455 0.00 0.00 0.00 3.32
3763 5285 4.746535 TTCTACTGTTCTCCACACACAA 57.253 40.909 0.00 0.00 0.00 3.33
3764 5286 4.955811 ATTCTACTGTTCTCCACACACA 57.044 40.909 0.00 0.00 0.00 3.72
3765 5287 4.083802 GCAATTCTACTGTTCTCCACACAC 60.084 45.833 0.00 0.00 0.00 3.82
3766 5288 4.065088 GCAATTCTACTGTTCTCCACACA 58.935 43.478 0.00 0.00 0.00 3.72
3767 5289 3.437049 GGCAATTCTACTGTTCTCCACAC 59.563 47.826 0.00 0.00 0.00 3.82
3768 5290 3.559171 GGGCAATTCTACTGTTCTCCACA 60.559 47.826 0.00 0.00 0.00 4.17
3769 5291 3.010420 GGGCAATTCTACTGTTCTCCAC 58.990 50.000 0.00 0.00 0.00 4.02
3770 5292 2.642311 TGGGCAATTCTACTGTTCTCCA 59.358 45.455 0.00 0.00 0.00 3.86
3771 5293 3.010420 GTGGGCAATTCTACTGTTCTCC 58.990 50.000 0.00 0.00 0.00 3.71
3772 5294 3.437049 GTGTGGGCAATTCTACTGTTCTC 59.563 47.826 0.00 0.00 0.00 2.87
3773 5295 3.412386 GTGTGGGCAATTCTACTGTTCT 58.588 45.455 0.00 0.00 0.00 3.01
3774 5296 2.159627 CGTGTGGGCAATTCTACTGTTC 59.840 50.000 0.00 0.00 0.00 3.18
3775 5297 2.151202 CGTGTGGGCAATTCTACTGTT 58.849 47.619 0.00 0.00 0.00 3.16
3776 5298 1.071699 ACGTGTGGGCAATTCTACTGT 59.928 47.619 0.00 0.00 0.00 3.55
3777 5299 1.464608 CACGTGTGGGCAATTCTACTG 59.535 52.381 7.58 0.00 0.00 2.74
3778 5300 1.071699 ACACGTGTGGGCAATTCTACT 59.928 47.619 22.71 0.00 34.19 2.57
3779 5301 1.196808 CACACGTGTGGGCAATTCTAC 59.803 52.381 35.65 0.00 42.10 2.59
3780 5302 1.518325 CACACGTGTGGGCAATTCTA 58.482 50.000 35.65 0.00 42.10 2.10
3781 5303 2.330254 CACACGTGTGGGCAATTCT 58.670 52.632 35.65 1.12 42.10 2.40
3782 5304 4.942090 CACACGTGTGGGCAATTC 57.058 55.556 35.65 0.00 42.10 2.17
3794 5316 4.742201 AGTAGCTGCGCCCACACG 62.742 66.667 4.18 0.00 0.00 4.49
3795 5317 2.358737 AAGTAGCTGCGCCCACAC 60.359 61.111 4.18 0.00 0.00 3.82
3796 5318 2.047274 GAAGTAGCTGCGCCCACA 60.047 61.111 4.18 0.00 0.00 4.17
3797 5319 3.188786 CGAAGTAGCTGCGCCCAC 61.189 66.667 4.18 0.00 0.00 4.61
3798 5320 3.691342 ACGAAGTAGCTGCGCCCA 61.691 61.111 4.18 0.00 41.94 5.36
3799 5321 3.188786 CACGAAGTAGCTGCGCCC 61.189 66.667 4.18 0.00 41.61 6.13
3800 5322 3.854459 GCACGAAGTAGCTGCGCC 61.854 66.667 4.18 0.00 41.61 6.53
3801 5323 3.854459 GGCACGAAGTAGCTGCGC 61.854 66.667 0.00 0.00 41.61 6.09
3802 5324 2.432456 TGGCACGAAGTAGCTGCG 60.432 61.111 0.00 0.00 41.61 5.18
3803 5325 1.667830 TGTGGCACGAAGTAGCTGC 60.668 57.895 13.77 0.00 41.61 5.25
3804 5326 0.599991 TGTGTGGCACGAAGTAGCTG 60.600 55.000 13.77 0.00 41.61 4.24
3805 5327 0.600255 GTGTGTGGCACGAAGTAGCT 60.600 55.000 13.77 0.00 41.61 3.32
3806 5328 1.860078 GTGTGTGGCACGAAGTAGC 59.140 57.895 13.77 0.00 41.61 3.58
3814 5336 1.319614 ACTTGTTGGGTGTGTGGCAC 61.320 55.000 11.55 11.55 46.97 5.01
3815 5337 0.256177 TACTTGTTGGGTGTGTGGCA 59.744 50.000 0.00 0.00 0.00 4.92
3816 5338 0.666374 GTACTTGTTGGGTGTGTGGC 59.334 55.000 0.00 0.00 0.00 5.01
3817 5339 2.341846 AGTACTTGTTGGGTGTGTGG 57.658 50.000 0.00 0.00 0.00 4.17
3818 5340 3.135994 GGTAGTACTTGTTGGGTGTGTG 58.864 50.000 0.00 0.00 0.00 3.82
3819 5341 2.105306 GGGTAGTACTTGTTGGGTGTGT 59.895 50.000 0.00 0.00 0.00 3.72
3820 5342 2.105134 TGGGTAGTACTTGTTGGGTGTG 59.895 50.000 0.00 0.00 0.00 3.82
3821 5343 2.410575 TGGGTAGTACTTGTTGGGTGT 58.589 47.619 0.00 0.00 0.00 4.16
3822 5344 3.606687 GATGGGTAGTACTTGTTGGGTG 58.393 50.000 0.00 0.00 0.00 4.61
3823 5345 2.574824 GGATGGGTAGTACTTGTTGGGT 59.425 50.000 0.00 0.00 0.00 4.51
3824 5346 2.092592 GGGATGGGTAGTACTTGTTGGG 60.093 54.545 0.00 0.00 0.00 4.12
3825 5347 2.092592 GGGGATGGGTAGTACTTGTTGG 60.093 54.545 0.00 0.00 0.00 3.77
3826 5348 2.574369 TGGGGATGGGTAGTACTTGTTG 59.426 50.000 0.00 0.00 0.00 3.33
3827 5349 2.574824 GTGGGGATGGGTAGTACTTGTT 59.425 50.000 0.00 0.00 0.00 2.83
3828 5350 2.193993 GTGGGGATGGGTAGTACTTGT 58.806 52.381 0.00 0.00 0.00 3.16
3829 5351 1.489230 GGTGGGGATGGGTAGTACTTG 59.511 57.143 0.00 0.00 0.00 3.16
3830 5352 1.627195 GGGTGGGGATGGGTAGTACTT 60.627 57.143 0.00 0.00 0.00 2.24
3831 5353 0.030399 GGGTGGGGATGGGTAGTACT 60.030 60.000 0.00 0.00 0.00 2.73
3832 5354 1.058428 GGGGTGGGGATGGGTAGTAC 61.058 65.000 0.00 0.00 0.00 2.73
3833 5355 1.319088 GGGGTGGGGATGGGTAGTA 59.681 63.158 0.00 0.00 0.00 1.82
3834 5356 2.043941 GGGGTGGGGATGGGTAGT 59.956 66.667 0.00 0.00 0.00 2.73
3835 5357 3.168528 CGGGGTGGGGATGGGTAG 61.169 72.222 0.00 0.00 0.00 3.18
3836 5358 4.027731 ACGGGGTGGGGATGGGTA 62.028 66.667 0.00 0.00 0.00 3.69
3854 5376 0.597118 TTTTGCTTCATGCCACACGC 60.597 50.000 0.00 0.00 42.00 5.34
3855 5377 2.068837 ATTTTGCTTCATGCCACACG 57.931 45.000 0.00 0.00 42.00 4.49
3869 5391 2.091541 AGGACGTGTGGGCATATTTTG 58.908 47.619 0.00 0.00 0.00 2.44
3870 5392 2.091541 CAGGACGTGTGGGCATATTTT 58.908 47.619 0.00 0.00 0.00 1.82
3871 5393 1.681780 CCAGGACGTGTGGGCATATTT 60.682 52.381 0.00 0.00 0.00 1.40
3872 5394 0.107214 CCAGGACGTGTGGGCATATT 60.107 55.000 0.00 0.00 0.00 1.28
3873 5395 1.526887 CCAGGACGTGTGGGCATAT 59.473 57.895 0.00 0.00 0.00 1.78
3874 5396 2.986290 CCAGGACGTGTGGGCATA 59.014 61.111 0.00 0.00 0.00 3.14
3875 5397 4.722700 GCCAGGACGTGTGGGCAT 62.723 66.667 14.05 0.00 45.70 4.40
3882 5404 3.932580 TTAGCTGCGCCAGGACGTG 62.933 63.158 4.18 0.00 34.88 4.49
3883 5405 2.725203 TTTTAGCTGCGCCAGGACGT 62.725 55.000 4.18 0.00 34.88 4.34
3884 5406 1.369091 ATTTTAGCTGCGCCAGGACG 61.369 55.000 4.18 0.00 31.21 4.79
3885 5407 1.599542 CTATTTTAGCTGCGCCAGGAC 59.400 52.381 4.18 0.00 31.21 3.85
3886 5408 1.475034 CCTATTTTAGCTGCGCCAGGA 60.475 52.381 4.18 0.00 31.21 3.86
3887 5409 0.947244 CCTATTTTAGCTGCGCCAGG 59.053 55.000 4.18 0.00 31.21 4.45
3888 5410 1.668419 ACCTATTTTAGCTGCGCCAG 58.332 50.000 4.18 3.40 34.12 4.85
3889 5411 2.557317 GTACCTATTTTAGCTGCGCCA 58.443 47.619 4.18 0.00 0.00 5.69
3890 5412 1.871676 GGTACCTATTTTAGCTGCGCC 59.128 52.381 4.18 0.00 0.00 6.53
3906 5428 2.359570 AATCGTCATCCCGCGGGTAC 62.360 60.000 41.57 32.82 36.47 3.34
3907 5429 1.678598 AAATCGTCATCCCGCGGGTA 61.679 55.000 41.57 28.68 36.47 3.69
3908 5430 1.678598 TAAATCGTCATCCCGCGGGT 61.679 55.000 41.57 26.88 36.47 5.28
3909 5431 0.944311 CTAAATCGTCATCCCGCGGG 60.944 60.000 39.13 39.13 0.00 6.13
3910 5432 0.249322 ACTAAATCGTCATCCCGCGG 60.249 55.000 21.04 21.04 0.00 6.46
3911 5433 1.257936 CAACTAAATCGTCATCCCGCG 59.742 52.381 0.00 0.00 0.00 6.46
3912 5434 1.003866 GCAACTAAATCGTCATCCCGC 60.004 52.381 0.00 0.00 0.00 6.13
3913 5435 1.597663 GGCAACTAAATCGTCATCCCG 59.402 52.381 0.00 0.00 0.00 5.14
3914 5436 2.614057 CTGGCAACTAAATCGTCATCCC 59.386 50.000 0.00 0.00 37.61 3.85
3915 5437 2.032178 GCTGGCAACTAAATCGTCATCC 59.968 50.000 0.00 0.00 37.61 3.51
3916 5438 2.032178 GGCTGGCAACTAAATCGTCATC 59.968 50.000 0.00 0.00 37.61 2.92
3917 5439 2.017049 GGCTGGCAACTAAATCGTCAT 58.983 47.619 0.00 0.00 37.61 3.06
3918 5440 1.448985 GGCTGGCAACTAAATCGTCA 58.551 50.000 0.00 0.00 37.61 4.35
3919 5441 0.373716 CGGCTGGCAACTAAATCGTC 59.626 55.000 1.08 0.00 37.61 4.20
3920 5442 1.024579 CCGGCTGGCAACTAAATCGT 61.025 55.000 0.00 0.00 37.61 3.73
3921 5443 0.742990 TCCGGCTGGCAACTAAATCG 60.743 55.000 6.73 0.00 34.14 3.34
3922 5444 1.334869 CATCCGGCTGGCAACTAAATC 59.665 52.381 6.73 0.00 34.14 2.17
3923 5445 1.392589 CATCCGGCTGGCAACTAAAT 58.607 50.000 6.73 0.00 34.14 1.40
3924 5446 0.679640 CCATCCGGCTGGCAACTAAA 60.680 55.000 12.21 0.00 34.14 1.85
3925 5447 1.077787 CCATCCGGCTGGCAACTAA 60.078 57.895 12.21 0.00 34.14 2.24
3926 5448 2.589540 CCATCCGGCTGGCAACTA 59.410 61.111 12.21 0.00 34.14 2.24
3936 5458 3.589988 GATAACTACATCTGCCATCCGG 58.410 50.000 0.00 0.00 0.00 5.14
3937 5459 3.589988 GGATAACTACATCTGCCATCCG 58.410 50.000 0.00 0.00 0.00 4.18
3938 5460 3.589988 CGGATAACTACATCTGCCATCC 58.410 50.000 0.00 0.00 0.00 3.51
3939 5461 3.589988 CCGGATAACTACATCTGCCATC 58.410 50.000 0.00 0.00 31.05 3.51
3940 5462 2.303022 CCCGGATAACTACATCTGCCAT 59.697 50.000 0.73 0.00 31.05 4.40
3941 5463 1.691976 CCCGGATAACTACATCTGCCA 59.308 52.381 0.73 0.00 31.05 4.92
3942 5464 1.968493 TCCCGGATAACTACATCTGCC 59.032 52.381 0.73 0.00 31.05 4.85
3943 5465 3.589988 CATCCCGGATAACTACATCTGC 58.410 50.000 0.73 0.00 31.05 4.26
3944 5466 3.617531 GCCATCCCGGATAACTACATCTG 60.618 52.174 0.73 0.00 36.56 2.90
3945 5467 2.567615 GCCATCCCGGATAACTACATCT 59.432 50.000 0.73 0.00 36.56 2.90
3946 5468 2.674177 CGCCATCCCGGATAACTACATC 60.674 54.545 0.73 0.00 36.56 3.06
3947 5469 1.275291 CGCCATCCCGGATAACTACAT 59.725 52.381 0.73 0.00 36.56 2.29
3948 5470 0.677288 CGCCATCCCGGATAACTACA 59.323 55.000 0.73 0.00 36.56 2.74
3949 5471 0.963962 TCGCCATCCCGGATAACTAC 59.036 55.000 0.73 0.00 36.56 2.73
3950 5472 1.707106 TTCGCCATCCCGGATAACTA 58.293 50.000 0.73 0.00 36.56 2.24
3951 5473 1.056660 ATTCGCCATCCCGGATAACT 58.943 50.000 0.73 0.00 36.56 2.24
3952 5474 2.754946 TATTCGCCATCCCGGATAAC 57.245 50.000 0.73 0.00 36.56 1.89
3953 5475 2.093181 CCATATTCGCCATCCCGGATAA 60.093 50.000 0.73 0.00 32.84 1.75
3954 5476 1.484653 CCATATTCGCCATCCCGGATA 59.515 52.381 0.73 0.00 36.56 2.59
3955 5477 0.253044 CCATATTCGCCATCCCGGAT 59.747 55.000 0.73 0.00 36.56 4.18
3956 5478 1.125093 ACCATATTCGCCATCCCGGA 61.125 55.000 0.73 0.00 36.56 5.14
3957 5479 0.250727 AACCATATTCGCCATCCCGG 60.251 55.000 0.00 0.00 38.11 5.73
3958 5480 0.874390 CAACCATATTCGCCATCCCG 59.126 55.000 0.00 0.00 0.00 5.14
3959 5481 1.981256 ACAACCATATTCGCCATCCC 58.019 50.000 0.00 0.00 0.00 3.85
3960 5482 5.508200 TTTTACAACCATATTCGCCATCC 57.492 39.130 0.00 0.00 0.00 3.51
3961 5483 4.976116 GCTTTTACAACCATATTCGCCATC 59.024 41.667 0.00 0.00 0.00 3.51
3962 5484 4.400884 TGCTTTTACAACCATATTCGCCAT 59.599 37.500 0.00 0.00 0.00 4.40
3963 5485 3.759086 TGCTTTTACAACCATATTCGCCA 59.241 39.130 0.00 0.00 0.00 5.69
3964 5486 4.102649 GTGCTTTTACAACCATATTCGCC 58.897 43.478 0.00 0.00 0.00 5.54
3965 5487 3.783943 CGTGCTTTTACAACCATATTCGC 59.216 43.478 0.00 0.00 0.00 4.70
3966 5488 4.339429 CCGTGCTTTTACAACCATATTCG 58.661 43.478 0.00 0.00 0.00 3.34
3967 5489 4.102649 GCCGTGCTTTTACAACCATATTC 58.897 43.478 0.00 0.00 0.00 1.75
3968 5490 3.508012 TGCCGTGCTTTTACAACCATATT 59.492 39.130 0.00 0.00 0.00 1.28
3969 5491 3.085533 TGCCGTGCTTTTACAACCATAT 58.914 40.909 0.00 0.00 0.00 1.78
3970 5492 2.505405 TGCCGTGCTTTTACAACCATA 58.495 42.857 0.00 0.00 0.00 2.74
3971 5493 1.323412 TGCCGTGCTTTTACAACCAT 58.677 45.000 0.00 0.00 0.00 3.55
3972 5494 1.103803 TTGCCGTGCTTTTACAACCA 58.896 45.000 0.00 0.00 0.00 3.67
3973 5495 1.066454 AGTTGCCGTGCTTTTACAACC 59.934 47.619 0.00 0.00 41.12 3.77
3974 5496 2.032924 AGAGTTGCCGTGCTTTTACAAC 59.967 45.455 0.00 0.00 40.65 3.32
3975 5497 2.289547 GAGAGTTGCCGTGCTTTTACAA 59.710 45.455 0.00 0.00 0.00 2.41
3976 5498 1.871039 GAGAGTTGCCGTGCTTTTACA 59.129 47.619 0.00 0.00 0.00 2.41
3977 5499 2.143925 AGAGAGTTGCCGTGCTTTTAC 58.856 47.619 0.00 0.00 0.00 2.01
3978 5500 2.543777 AGAGAGTTGCCGTGCTTTTA 57.456 45.000 0.00 0.00 0.00 1.52
3979 5501 2.543777 TAGAGAGTTGCCGTGCTTTT 57.456 45.000 0.00 0.00 0.00 2.27
3980 5502 2.289694 ACATAGAGAGTTGCCGTGCTTT 60.290 45.455 0.00 0.00 0.00 3.51
3981 5503 1.276421 ACATAGAGAGTTGCCGTGCTT 59.724 47.619 0.00 0.00 0.00 3.91
3982 5504 0.898320 ACATAGAGAGTTGCCGTGCT 59.102 50.000 0.00 0.00 0.00 4.40
3983 5505 1.726853 AACATAGAGAGTTGCCGTGC 58.273 50.000 0.00 0.00 0.00 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.