Multiple sequence alignment - TraesCS3D01G446400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G446400 chr3D 100.000 4540 0 0 1 4540 555183680 555179141 0.000000e+00 8384.0
1 TraesCS3D01G446400 chr3D 90.588 255 23 1 2317 2571 532557860 532558113 2.020000e-88 337.0
2 TraesCS3D01G446400 chr3B 93.927 1416 72 7 3110 4511 738277740 738276325 0.000000e+00 2126.0
3 TraesCS3D01G446400 chr3B 88.630 1073 62 21 750 1789 738280146 738279101 0.000000e+00 1251.0
4 TraesCS3D01G446400 chr3B 89.677 465 36 4 1835 2288 738278811 738278348 2.350000e-162 582.0
5 TraesCS3D01G446400 chr3B 89.409 406 17 7 2569 2948 738278144 738277739 5.280000e-134 488.0
6 TraesCS3D01G446400 chr4D 94.929 631 31 1 1 631 44801943 44801314 0.000000e+00 987.0
7 TraesCS3D01G446400 chr4D 94.762 630 32 1 2 631 472766132 472766760 0.000000e+00 979.0
8 TraesCS3D01G446400 chr4D 94.612 631 33 1 1 631 21634461 21635090 0.000000e+00 976.0
9 TraesCS3D01G446400 chr4D 90.000 260 26 0 2315 2574 15448519 15448778 2.020000e-88 337.0
10 TraesCS3D01G446400 chr4D 98.204 167 3 0 2947 3113 93338206 93338040 4.440000e-75 292.0
11 TraesCS3D01G446400 chr7D 94.921 630 29 3 2 631 526409001 526409627 0.000000e+00 983.0
12 TraesCS3D01G446400 chr7D 94.624 186 6 4 2927 3111 39001267 39001449 7.430000e-73 285.0
13 TraesCS3D01G446400 chr7D 80.422 332 60 4 1117 1447 182326789 182326462 9.750000e-62 248.0
14 TraesCS3D01G446400 chr7D 89.873 79 8 0 2621 2699 54200253 54200175 8.040000e-18 102.0
15 TraesCS3D01G446400 chr6D 94.770 631 32 1 1 631 113969529 113970158 0.000000e+00 981.0
16 TraesCS3D01G446400 chr6D 94.762 630 31 2 2 631 374950020 374949393 0.000000e+00 979.0
17 TraesCS3D01G446400 chr6D 94.612 631 33 1 1 631 363814880 363815509 0.000000e+00 976.0
18 TraesCS3D01G446400 chr5D 95.040 625 30 1 1 625 282426320 282426943 0.000000e+00 981.0
19 TraesCS3D01G446400 chr5D 94.612 631 33 1 1 631 416985998 416985369 0.000000e+00 976.0
20 TraesCS3D01G446400 chr5D 98.225 169 3 0 2947 3115 274578012 274578180 3.430000e-76 296.0
21 TraesCS3D01G446400 chr5D 97.872 47 1 0 1787 1833 474813272 474813226 1.050000e-11 82.4
22 TraesCS3D01G446400 chr3A 91.725 713 34 8 962 1660 692051535 692050834 0.000000e+00 966.0
23 TraesCS3D01G446400 chr3A 93.867 587 35 1 3110 3695 692048555 692047969 0.000000e+00 883.0
24 TraesCS3D01G446400 chr3A 91.004 478 26 5 1835 2296 692049726 692049250 2.980000e-176 628.0
25 TraesCS3D01G446400 chr3A 87.327 505 30 18 699 1173 692363386 692362886 8.590000e-152 547.0
26 TraesCS3D01G446400 chr3A 90.370 405 14 1 2569 2948 692048958 692048554 4.050000e-140 508.0
27 TraesCS3D01G446400 chr3A 91.870 246 20 0 2330 2575 309063802 309063557 1.210000e-90 344.0
28 TraesCS3D01G446400 chr3A 90.226 266 23 3 2318 2580 493129938 493129673 1.210000e-90 344.0
29 TraesCS3D01G446400 chr3A 90.076 262 23 3 2316 2575 478701211 478701471 2.020000e-88 337.0
30 TraesCS3D01G446400 chr3A 90.347 259 22 3 2316 2572 574520194 574520451 2.020000e-88 337.0
31 TraesCS3D01G446400 chr3A 91.589 214 17 1 747 959 692051825 692051612 1.240000e-75 294.0
32 TraesCS3D01G446400 chr3A 88.372 129 11 2 1659 1787 692049854 692049730 7.870000e-33 152.0
33 TraesCS3D01G446400 chr3A 92.079 101 7 1 646 746 692052357 692052258 1.700000e-29 141.0
34 TraesCS3D01G446400 chr3A 89.655 58 6 0 1776 1833 233523135 233523192 1.750000e-09 75.0
35 TraesCS3D01G446400 chr1A 86.145 498 48 8 1835 2324 2343297 2342813 6.730000e-143 518.0
36 TraesCS3D01G446400 chr1A 89.011 364 39 1 3114 3476 2341024 2340661 2.490000e-122 449.0
37 TraesCS3D01G446400 chr1A 90.734 259 22 2 2318 2574 521902301 521902043 1.210000e-90 344.0
38 TraesCS3D01G446400 chr1A 71.695 590 145 22 3874 4452 471705278 471705856 1.320000e-30 145.0
39 TraesCS3D01G446400 chr1A 97.826 46 1 0 1788 1833 448018227 448018182 3.760000e-11 80.5
40 TraesCS3D01G446400 chr1A 90.164 61 5 1 1773 1833 164456242 164456183 1.350000e-10 78.7
41 TraesCS3D01G446400 chr2D 90.299 268 21 5 2311 2576 6521430 6521166 3.360000e-91 346.0
42 TraesCS3D01G446400 chr2D 98.225 169 3 0 2945 3113 560959483 560959651 3.430000e-76 296.0
43 TraesCS3D01G446400 chr1B 91.566 249 21 0 2331 2579 453879193 453879441 1.210000e-90 344.0
44 TraesCS3D01G446400 chr1B 84.986 353 33 13 1395 1732 1892979 1892632 1.560000e-89 340.0
45 TraesCS3D01G446400 chr1B 82.517 143 17 3 1835 1969 1892584 1892442 7.980000e-23 119.0
46 TraesCS3D01G446400 chr5A 98.235 170 3 0 2944 3113 290391864 290391695 9.550000e-77 298.0
47 TraesCS3D01G446400 chr5A 97.674 172 4 0 2946 3117 382566637 382566808 3.430000e-76 296.0
48 TraesCS3D01G446400 chr5A 77.778 324 63 8 1130 1447 479462491 479462171 1.670000e-44 191.0
49 TraesCS3D01G446400 chr5A 71.972 578 130 27 3883 4443 450742457 450741895 1.700000e-29 141.0
50 TraesCS3D01G446400 chr5A 94.545 55 2 1 1779 1833 596009993 596009940 2.910000e-12 84.2
51 TraesCS3D01G446400 chr5A 91.525 59 4 1 1776 1833 248535447 248535389 3.760000e-11 80.5
52 TraesCS3D01G446400 chr1D 98.225 169 3 0 2947 3115 238940216 238940384 3.430000e-76 296.0
53 TraesCS3D01G446400 chrUn 97.674 172 2 2 2946 3116 74544771 74544601 1.240000e-75 294.0
54 TraesCS3D01G446400 chr7A 96.067 178 5 2 2942 3118 324925025 324925201 5.750000e-74 289.0
55 TraesCS3D01G446400 chr7A 79.765 341 58 10 1117 1453 189332030 189332363 2.110000e-58 237.0
56 TraesCS3D01G446400 chr7A 78.116 329 66 5 1122 1447 189433932 189434257 2.140000e-48 204.0
57 TraesCS3D01G446400 chr7A 100.000 47 0 0 1787 1833 19940995 19941041 2.250000e-13 87.9
58 TraesCS3D01G446400 chr7A 94.000 50 3 0 1784 1833 66169002 66169051 4.870000e-10 76.8
59 TraesCS3D01G446400 chr7B 80.597 335 54 9 1117 1447 150543077 150542750 9.750000e-62 248.0
60 TraesCS3D01G446400 chr7B 79.938 324 61 4 1128 1449 150562227 150561906 7.590000e-58 235.0
61 TraesCS3D01G446400 chr5B 78.019 323 64 6 1130 1447 454908051 454907731 3.580000e-46 196.0
62 TraesCS3D01G446400 chr4A 96.078 51 2 0 1784 1834 282272006 282272056 2.910000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G446400 chr3D 555179141 555183680 4539 True 8384.000000 8384 100.000000 1 4540 1 chr3D.!!$R1 4539
1 TraesCS3D01G446400 chr3B 738276325 738280146 3821 True 1111.750000 2126 90.410750 750 4511 4 chr3B.!!$R1 3761
2 TraesCS3D01G446400 chr4D 44801314 44801943 629 True 987.000000 987 94.929000 1 631 1 chr4D.!!$R1 630
3 TraesCS3D01G446400 chr4D 472766132 472766760 628 False 979.000000 979 94.762000 2 631 1 chr4D.!!$F3 629
4 TraesCS3D01G446400 chr4D 21634461 21635090 629 False 976.000000 976 94.612000 1 631 1 chr4D.!!$F2 630
5 TraesCS3D01G446400 chr7D 526409001 526409627 626 False 983.000000 983 94.921000 2 631 1 chr7D.!!$F2 629
6 TraesCS3D01G446400 chr6D 113969529 113970158 629 False 981.000000 981 94.770000 1 631 1 chr6D.!!$F1 630
7 TraesCS3D01G446400 chr6D 374949393 374950020 627 True 979.000000 979 94.762000 2 631 1 chr6D.!!$R1 629
8 TraesCS3D01G446400 chr6D 363814880 363815509 629 False 976.000000 976 94.612000 1 631 1 chr6D.!!$F2 630
9 TraesCS3D01G446400 chr5D 282426320 282426943 623 False 981.000000 981 95.040000 1 625 1 chr5D.!!$F2 624
10 TraesCS3D01G446400 chr5D 416985369 416985998 629 True 976.000000 976 94.612000 1 631 1 chr5D.!!$R1 630
11 TraesCS3D01G446400 chr3A 692362886 692363386 500 True 547.000000 547 87.327000 699 1173 1 chr3A.!!$R3 474
12 TraesCS3D01G446400 chr3A 692047969 692052357 4388 True 510.285714 966 91.286571 646 3695 7 chr3A.!!$R4 3049
13 TraesCS3D01G446400 chr1A 2340661 2343297 2636 True 483.500000 518 87.578000 1835 3476 2 chr1A.!!$R4 1641
14 TraesCS3D01G446400 chr1B 1892442 1892979 537 True 229.500000 340 83.751500 1395 1969 2 chr1B.!!$R1 574

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
626 627 1.447838 GCTCGCTCCATTGTTCCGA 60.448 57.895 0.00 0.00 0.00 4.55 F
1921 3710 0.247460 TGACTCTCGGAATGCACCTG 59.753 55.000 0.00 0.00 0.00 4.00 F
2484 4706 0.032815 TGTTGAGCGGTCGACATTGA 59.967 50.000 29.21 10.67 41.48 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2465 4687 0.032815 TCAATGTCGACCGCTCAACA 59.967 50.000 14.12 0.0 0.0 3.33 R
3492 7061 0.309302 TTGTTGATGACGTTTGGCCG 59.691 50.000 0.00 0.0 0.0 6.13 R
3705 7274 1.000274 AGTGGCCTTGAAAACAATCGC 60.000 47.619 3.32 0.0 0.0 4.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 3.101437 TGGGTTCGAGCTTATCAGGTTA 58.899 45.455 0.00 0.00 0.00 2.85
111 112 5.681543 CCAAACTTTAAGAAACGACAGCTTC 59.318 40.000 0.00 0.00 0.00 3.86
150 151 3.764434 ACAGTTCATATGGTGTCGTCTCT 59.236 43.478 2.13 0.00 0.00 3.10
173 174 3.008049 ACGGATTTAGATGGTGCCCTATC 59.992 47.826 0.00 0.00 0.00 2.08
192 193 3.535280 TCTAACATGAATGCAGCCGTA 57.465 42.857 0.00 0.00 0.00 4.02
283 284 3.829886 AAGTACGGTTACGATGTTCGA 57.170 42.857 3.62 0.00 43.74 3.71
289 290 2.090041 CGGTTACGATGTTCGAACACAG 59.910 50.000 31.87 27.57 43.74 3.66
345 346 8.200792 AGTTGCAAAACTATTCCACATTGTTTA 58.799 29.630 0.00 0.00 31.67 2.01
626 627 1.447838 GCTCGCTCCATTGTTCCGA 60.448 57.895 0.00 0.00 0.00 4.55
631 632 1.804151 CGCTCCATTGTTCCGAAGAAA 59.196 47.619 0.00 0.00 32.58 2.52
632 633 2.225491 CGCTCCATTGTTCCGAAGAAAA 59.775 45.455 0.00 0.00 32.58 2.29
633 634 3.304391 CGCTCCATTGTTCCGAAGAAAAA 60.304 43.478 0.00 0.00 33.69 1.94
634 635 4.229876 GCTCCATTGTTCCGAAGAAAAAG 58.770 43.478 0.00 0.00 32.66 2.27
635 636 4.023193 GCTCCATTGTTCCGAAGAAAAAGA 60.023 41.667 0.00 0.00 32.66 2.52
636 637 5.335976 GCTCCATTGTTCCGAAGAAAAAGAT 60.336 40.000 0.00 0.00 32.66 2.40
637 638 6.128007 GCTCCATTGTTCCGAAGAAAAAGATA 60.128 38.462 0.00 0.00 32.66 1.98
638 639 7.377766 TCCATTGTTCCGAAGAAAAAGATAG 57.622 36.000 0.00 0.00 32.66 2.08
639 640 6.374333 TCCATTGTTCCGAAGAAAAAGATAGG 59.626 38.462 0.00 0.00 32.66 2.57
640 641 6.151144 CCATTGTTCCGAAGAAAAAGATAGGT 59.849 38.462 0.00 0.00 32.66 3.08
641 642 7.309194 CCATTGTTCCGAAGAAAAAGATAGGTT 60.309 37.037 0.00 0.00 32.66 3.50
642 643 7.576861 TTGTTCCGAAGAAAAAGATAGGTTT 57.423 32.000 0.00 0.00 32.58 3.27
643 644 8.680039 TTGTTCCGAAGAAAAAGATAGGTTTA 57.320 30.769 0.00 0.00 32.58 2.01
644 645 8.319143 TGTTCCGAAGAAAAAGATAGGTTTAG 57.681 34.615 0.00 0.00 32.58 1.85
650 651 6.713731 AGAAAAAGATAGGTTTAGGTCCCA 57.286 37.500 0.00 0.00 0.00 4.37
675 676 3.251245 TCTTAATCGAGATCCAGCGACTC 59.749 47.826 5.25 0.00 39.56 3.36
694 695 2.760385 CCGGACCCCAGGACTCTC 60.760 72.222 0.00 0.00 0.00 3.20
695 696 2.360980 CGGACCCCAGGACTCTCT 59.639 66.667 0.00 0.00 0.00 3.10
696 697 2.055042 CGGACCCCAGGACTCTCTG 61.055 68.421 0.00 0.00 34.70 3.35
771 1204 5.063204 CCCACAGTAAACATCTTCAAGTGA 58.937 41.667 0.00 0.00 0.00 3.41
790 1223 3.324713 GGCCATAGTCAGCCTGGT 58.675 61.111 0.00 0.00 46.14 4.00
832 1271 2.252260 CTCCTTTTGTGTGGCGCG 59.748 61.111 0.00 0.00 0.00 6.86
887 1327 2.050639 CTTGCACAGCTCACGTTGCA 62.051 55.000 6.25 6.25 0.00 4.08
901 1341 3.968096 CACGTTGCAACAGTGTTGATTAG 59.032 43.478 34.65 23.84 32.66 1.73
931 1371 5.128827 GTGTCCTCCTCCATTGATTGTACTA 59.871 44.000 0.00 0.00 0.00 1.82
1001 1515 8.982723 ACTGAGATGTACAGTAGTTTCCATTAT 58.017 33.333 0.33 0.00 45.10 1.28
1019 1533 1.319541 ATGTCCGGATCGACCTACTG 58.680 55.000 7.81 0.00 36.31 2.74
1044 1558 6.540189 GGTGCACTGAGATGTTTAATACAGAT 59.460 38.462 17.98 0.00 40.83 2.90
1198 1737 1.306141 TTCCGCATCCTCTCCCACT 60.306 57.895 0.00 0.00 0.00 4.00
1357 1896 4.704833 GCGACCCTGCCAAGCTCA 62.705 66.667 0.00 0.00 0.00 4.26
1368 1907 1.649664 CCAAGCTCAAGGACATCTCG 58.350 55.000 0.00 0.00 0.00 4.04
1373 1912 1.066858 GCTCAAGGACATCTCGGACAA 60.067 52.381 0.00 0.00 0.00 3.18
1463 2002 6.353602 CCTCAAGGTAATTAAGGCTAGGGAAA 60.354 42.308 0.00 0.00 0.00 3.13
1498 2049 4.340666 TGGCTAAAATTTTGCTGACTGACA 59.659 37.500 13.76 4.52 0.00 3.58
1503 2054 7.383300 GCTAAAATTTTGCTGACTGACAAATCT 59.617 33.333 13.76 0.00 35.81 2.40
1526 2077 7.590279 TCTAATGAAATTTCCGAAACTTGGAC 58.410 34.615 15.48 0.00 37.87 4.02
1663 3204 0.252012 AGCCTGCTCTGTCCTAGTGT 60.252 55.000 0.00 0.00 0.00 3.55
1666 3207 2.933056 GCCTGCTCTGTCCTAGTGTTTC 60.933 54.545 0.00 0.00 0.00 2.78
1667 3208 2.564947 CCTGCTCTGTCCTAGTGTTTCT 59.435 50.000 0.00 0.00 0.00 2.52
1718 3259 7.757624 GTGAAATTGAACAAAAAGTACTGACCA 59.242 33.333 0.00 0.00 0.00 4.02
1752 3293 7.742767 AGTAACTAGGAAAACAGAAGGCTAAA 58.257 34.615 0.00 0.00 0.00 1.85
1783 3324 4.331168 GCAGGCAACATCCTCGATTATATC 59.669 45.833 0.00 0.00 41.41 1.63
1786 3327 6.091849 CAGGCAACATCCTCGATTATATCAAG 59.908 42.308 0.00 0.00 41.41 3.02
1789 3330 7.063544 GGCAACATCCTCGATTATATCAAGTAC 59.936 40.741 0.00 0.00 0.00 2.73
1790 3331 7.815068 GCAACATCCTCGATTATATCAAGTACT 59.185 37.037 0.00 0.00 0.00 2.73
1791 3332 9.698309 CAACATCCTCGATTATATCAAGTACTT 57.302 33.333 1.12 1.12 0.00 2.24
1792 3333 9.915629 AACATCCTCGATTATATCAAGTACTTC 57.084 33.333 4.77 0.00 0.00 3.01
1794 3335 8.744652 CATCCTCGATTATATCAAGTACTTCCT 58.255 37.037 4.77 0.00 0.00 3.36
1795 3336 8.338072 TCCTCGATTATATCAAGTACTTCCTC 57.662 38.462 4.77 0.00 0.00 3.71
1796 3337 7.393796 TCCTCGATTATATCAAGTACTTCCTCC 59.606 40.741 4.77 0.00 0.00 4.30
1798 3339 6.713903 TCGATTATATCAAGTACTTCCTCCGT 59.286 38.462 4.77 0.00 0.00 4.69
1799 3340 7.230108 TCGATTATATCAAGTACTTCCTCCGTT 59.770 37.037 4.77 0.00 0.00 4.44
1800 3341 7.537991 CGATTATATCAAGTACTTCCTCCGTTC 59.462 40.741 4.77 0.00 0.00 3.95
1801 3342 3.889520 ATCAAGTACTTCCTCCGTTCC 57.110 47.619 4.77 0.00 0.00 3.62
1803 3344 1.542915 CAAGTACTTCCTCCGTTCCGA 59.457 52.381 4.77 0.00 0.00 4.55
1805 3346 2.454538 AGTACTTCCTCCGTTCCGAAT 58.545 47.619 0.00 0.00 0.00 3.34
1807 3348 4.019174 AGTACTTCCTCCGTTCCGAATTA 58.981 43.478 0.00 0.00 0.00 1.40
1808 3349 3.242549 ACTTCCTCCGTTCCGAATTAC 57.757 47.619 0.00 0.00 0.00 1.89
1809 3350 2.830321 ACTTCCTCCGTTCCGAATTACT 59.170 45.455 0.00 0.00 0.00 2.24
1810 3351 3.119209 ACTTCCTCCGTTCCGAATTACTC 60.119 47.826 0.00 0.00 0.00 2.59
1812 3353 1.133790 CCTCCGTTCCGAATTACTCGT 59.866 52.381 0.00 0.00 46.65 4.18
1813 3354 2.448219 CTCCGTTCCGAATTACTCGTC 58.552 52.381 0.00 0.00 46.65 4.20
1814 3355 1.186030 CCGTTCCGAATTACTCGTCG 58.814 55.000 0.00 0.00 46.65 5.12
1815 3356 0.564767 CGTTCCGAATTACTCGTCGC 59.435 55.000 0.00 0.00 46.65 5.19
1816 3357 1.621107 GTTCCGAATTACTCGTCGCA 58.379 50.000 0.00 0.00 46.65 5.10
1818 3359 2.350899 TCCGAATTACTCGTCGCAAA 57.649 45.000 0.00 0.00 46.65 3.68
1819 3360 2.674954 TCCGAATTACTCGTCGCAAAA 58.325 42.857 0.00 0.00 46.65 2.44
1820 3361 3.058450 TCCGAATTACTCGTCGCAAAAA 58.942 40.909 0.00 0.00 46.65 1.94
1822 3363 3.778718 CCGAATTACTCGTCGCAAAAATG 59.221 43.478 0.00 0.00 46.65 2.32
1823 3364 3.778718 CGAATTACTCGTCGCAAAAATGG 59.221 43.478 0.00 0.00 42.89 3.16
1826 3367 2.900122 ACTCGTCGCAAAAATGGATG 57.100 45.000 0.00 0.00 0.00 3.51
1828 3369 3.331150 ACTCGTCGCAAAAATGGATGTA 58.669 40.909 0.00 0.00 0.00 2.29
1830 3371 4.034048 ACTCGTCGCAAAAATGGATGTATC 59.966 41.667 0.00 0.00 0.00 2.24
1831 3372 4.188462 TCGTCGCAAAAATGGATGTATCT 58.812 39.130 0.00 0.00 0.00 1.98
1832 3373 5.353111 TCGTCGCAAAAATGGATGTATCTA 58.647 37.500 0.00 0.00 0.00 1.98
1833 3374 5.233476 TCGTCGCAAAAATGGATGTATCTAC 59.767 40.000 0.00 0.00 0.00 2.59
1870 3659 1.801771 TCGGCAAGTTCAAATGTACCG 59.198 47.619 0.00 0.00 40.70 4.02
1911 3700 2.290122 AATGCTCCGCTGACTCTCGG 62.290 60.000 0.00 0.00 46.52 4.63
1918 3707 1.416813 CGCTGACTCTCGGAATGCAC 61.417 60.000 0.00 0.00 0.00 4.57
1919 3708 1.086634 GCTGACTCTCGGAATGCACC 61.087 60.000 0.00 0.00 0.00 5.01
1920 3709 0.534412 CTGACTCTCGGAATGCACCT 59.466 55.000 0.00 0.00 0.00 4.00
1921 3710 0.247460 TGACTCTCGGAATGCACCTG 59.753 55.000 0.00 0.00 0.00 4.00
1922 3711 0.247736 GACTCTCGGAATGCACCTGT 59.752 55.000 0.00 0.00 0.00 4.00
1923 3712 1.476891 GACTCTCGGAATGCACCTGTA 59.523 52.381 0.00 0.00 0.00 2.74
1924 3713 1.204941 ACTCTCGGAATGCACCTGTAC 59.795 52.381 0.00 0.00 0.00 2.90
1948 3748 1.402456 GCGATGGACGTACAAGACACT 60.402 52.381 3.58 0.00 44.60 3.55
2164 3964 3.051210 CTGACTGAGGTGACGGCA 58.949 61.111 0.00 0.00 0.00 5.69
2167 3967 3.226429 GACTGAGGTGACGGCAGCA 62.226 63.158 24.58 5.67 44.77 4.41
2183 3983 4.415150 CAGTGCTGCCGGGGATGT 62.415 66.667 2.18 0.00 0.00 3.06
2310 4532 9.352191 CATAGATACTACCACCTAGTACAACTT 57.648 37.037 0.00 0.00 40.18 2.66
2348 4570 3.571571 TGACTAGTCAATGTGTACGTGC 58.428 45.455 23.24 0.00 36.53 5.34
2349 4571 3.004944 TGACTAGTCAATGTGTACGTGCA 59.995 43.478 23.24 0.82 36.53 4.57
2350 4572 3.985008 ACTAGTCAATGTGTACGTGCAA 58.015 40.909 8.25 0.00 0.00 4.08
2351 4573 4.566004 ACTAGTCAATGTGTACGTGCAAT 58.434 39.130 8.25 1.77 0.00 3.56
2352 4574 3.811722 AGTCAATGTGTACGTGCAATG 57.188 42.857 8.25 8.35 0.00 2.82
2353 4575 2.095768 AGTCAATGTGTACGTGCAATGC 60.096 45.455 8.25 0.00 0.00 3.56
2354 4576 1.876156 TCAATGTGTACGTGCAATGCA 59.124 42.857 8.25 2.72 35.60 3.96
2387 4609 9.674068 TTTGTAAGTATATTAAGTGCATGTGGA 57.326 29.630 0.00 0.00 0.00 4.02
2388 4610 9.845740 TTGTAAGTATATTAAGTGCATGTGGAT 57.154 29.630 0.00 0.00 0.00 3.41
2398 4620 8.902540 TTAAGTGCATGTGGATATTAAGTAGG 57.097 34.615 0.00 0.00 0.00 3.18
2399 4621 6.747414 AGTGCATGTGGATATTAAGTAGGA 57.253 37.500 0.00 0.00 0.00 2.94
2400 4622 7.321717 AGTGCATGTGGATATTAAGTAGGAT 57.678 36.000 0.00 0.00 0.00 3.24
2401 4623 8.435931 AGTGCATGTGGATATTAAGTAGGATA 57.564 34.615 0.00 0.00 0.00 2.59
2402 4624 9.051259 AGTGCATGTGGATATTAAGTAGGATAT 57.949 33.333 0.00 0.00 0.00 1.63
2403 4625 9.672673 GTGCATGTGGATATTAAGTAGGATATT 57.327 33.333 0.00 0.00 0.00 1.28
2430 4652 9.847706 ATTTGCGTGTTATTATGTGATTAACAA 57.152 25.926 0.00 0.00 43.61 2.83
2431 4653 9.847706 TTTGCGTGTTATTATGTGATTAACAAT 57.152 25.926 0.00 0.00 43.61 2.71
2458 4680 5.950758 TTGGTATGAAATTAACTGCACGT 57.049 34.783 0.00 0.00 0.00 4.49
2459 4681 5.950758 TGGTATGAAATTAACTGCACGTT 57.049 34.783 6.74 6.74 39.64 3.99
2460 4682 7.436430 TTGGTATGAAATTAACTGCACGTTA 57.564 32.000 5.10 5.10 37.05 3.18
2471 4693 7.672351 TTAACTGCACGTTAAAATTGTTGAG 57.328 32.000 14.92 0.00 43.23 3.02
2472 4694 4.041723 ACTGCACGTTAAAATTGTTGAGC 58.958 39.130 0.00 0.00 0.00 4.26
2473 4695 3.039405 TGCACGTTAAAATTGTTGAGCG 58.961 40.909 0.00 0.00 0.00 5.03
2474 4696 2.403698 GCACGTTAAAATTGTTGAGCGG 59.596 45.455 0.00 0.00 0.00 5.52
2475 4697 3.623863 CACGTTAAAATTGTTGAGCGGT 58.376 40.909 0.00 0.00 0.00 5.68
2476 4698 3.662186 CACGTTAAAATTGTTGAGCGGTC 59.338 43.478 7.89 7.89 0.00 4.79
2477 4699 2.900046 CGTTAAAATTGTTGAGCGGTCG 59.100 45.455 10.46 0.00 0.00 4.79
2478 4700 3.363182 CGTTAAAATTGTTGAGCGGTCGA 60.363 43.478 10.46 5.07 0.00 4.20
2479 4701 2.681152 AAAATTGTTGAGCGGTCGAC 57.319 45.000 24.91 24.91 37.58 4.20
2480 4702 1.588674 AAATTGTTGAGCGGTCGACA 58.411 45.000 29.21 29.21 44.18 4.35
2481 4703 1.808411 AATTGTTGAGCGGTCGACAT 58.192 45.000 32.16 19.29 45.03 3.06
2482 4704 1.808411 ATTGTTGAGCGGTCGACATT 58.192 45.000 32.16 26.32 45.03 2.71
2483 4705 0.865111 TTGTTGAGCGGTCGACATTG 59.135 50.000 32.16 7.61 45.03 2.82
2484 4706 0.032815 TGTTGAGCGGTCGACATTGA 59.967 50.000 29.21 10.67 41.48 2.57
2485 4707 1.144969 GTTGAGCGGTCGACATTGAA 58.855 50.000 26.30 3.78 37.09 2.69
2486 4708 1.126846 GTTGAGCGGTCGACATTGAAG 59.873 52.381 26.30 2.19 37.09 3.02
2487 4709 1.014044 TGAGCGGTCGACATTGAAGC 61.014 55.000 18.91 11.83 0.00 3.86
2488 4710 1.005037 AGCGGTCGACATTGAAGCA 60.005 52.632 18.91 0.00 0.00 3.91
2489 4711 0.391661 AGCGGTCGACATTGAAGCAT 60.392 50.000 18.91 0.93 0.00 3.79
2490 4712 0.447801 GCGGTCGACATTGAAGCATT 59.552 50.000 18.91 0.00 0.00 3.56
2496 4718 4.184629 GTCGACATTGAAGCATTCTAGGT 58.815 43.478 11.55 0.00 46.39 3.08
2497 4719 4.631813 GTCGACATTGAAGCATTCTAGGTT 59.368 41.667 11.55 0.00 44.05 3.50
2498 4720 4.631377 TCGACATTGAAGCATTCTAGGTTG 59.369 41.667 0.00 0.00 44.05 3.77
2499 4721 4.393062 CGACATTGAAGCATTCTAGGTTGT 59.607 41.667 0.00 0.00 44.05 3.32
2500 4722 5.106555 CGACATTGAAGCATTCTAGGTTGTT 60.107 40.000 0.00 0.00 44.05 2.83
2501 4723 6.017400 ACATTGAAGCATTCTAGGTTGTTG 57.983 37.500 0.00 0.00 41.61 3.33
2502 4724 5.047802 ACATTGAAGCATTCTAGGTTGTTGG 60.048 40.000 0.00 0.00 41.61 3.77
2503 4725 7.196532 ACATTGAAGCATTCTAGGTTGTTGGA 61.197 38.462 0.00 0.00 41.61 3.53
2504 4726 8.452164 ACATTGAAGCATTCTAGGTTGTTGGAT 61.452 37.037 0.00 0.00 41.61 3.41
2505 4727 5.904362 GAAGCATTCTAGGTTGTTGGATT 57.096 39.130 0.00 0.00 43.23 3.01
2506 4728 5.644644 GAAGCATTCTAGGTTGTTGGATTG 58.355 41.667 0.00 0.00 43.23 2.67
2507 4729 4.922206 AGCATTCTAGGTTGTTGGATTGA 58.078 39.130 0.00 0.00 0.00 2.57
2508 4730 4.702131 AGCATTCTAGGTTGTTGGATTGAC 59.298 41.667 0.00 0.00 0.00 3.18
2509 4731 4.458989 GCATTCTAGGTTGTTGGATTGACA 59.541 41.667 0.00 0.00 0.00 3.58
2510 4732 5.126061 GCATTCTAGGTTGTTGGATTGACAT 59.874 40.000 0.00 0.00 0.00 3.06
2511 4733 6.558009 CATTCTAGGTTGTTGGATTGACATG 58.442 40.000 0.00 0.00 0.00 3.21
2512 4734 5.497464 TCTAGGTTGTTGGATTGACATGA 57.503 39.130 0.00 0.00 0.00 3.07
2513 4735 6.065976 TCTAGGTTGTTGGATTGACATGAT 57.934 37.500 0.00 0.00 0.00 2.45
2514 4736 6.484288 TCTAGGTTGTTGGATTGACATGATT 58.516 36.000 0.00 0.00 0.00 2.57
2515 4737 6.947733 TCTAGGTTGTTGGATTGACATGATTT 59.052 34.615 0.00 0.00 0.00 2.17
2516 4738 5.786311 AGGTTGTTGGATTGACATGATTTG 58.214 37.500 0.00 0.00 0.00 2.32
2517 4739 5.539574 AGGTTGTTGGATTGACATGATTTGA 59.460 36.000 0.00 0.00 0.00 2.69
2518 4740 6.211986 AGGTTGTTGGATTGACATGATTTGAT 59.788 34.615 0.00 0.00 0.00 2.57
2519 4741 6.311935 GGTTGTTGGATTGACATGATTTGATG 59.688 38.462 0.00 0.00 0.00 3.07
2520 4742 5.968254 TGTTGGATTGACATGATTTGATGG 58.032 37.500 0.00 0.00 0.00 3.51
2521 4743 4.659111 TGGATTGACATGATTTGATGGC 57.341 40.909 0.00 0.00 0.00 4.40
2522 4744 3.385433 TGGATTGACATGATTTGATGGCC 59.615 43.478 0.00 0.00 29.16 5.36
2523 4745 3.551454 GGATTGACATGATTTGATGGCCG 60.551 47.826 0.00 0.00 29.16 6.13
2524 4746 2.416680 TGACATGATTTGATGGCCGA 57.583 45.000 0.00 0.00 29.16 5.54
2525 4747 2.291365 TGACATGATTTGATGGCCGAG 58.709 47.619 0.00 0.00 29.16 4.63
2526 4748 2.093021 TGACATGATTTGATGGCCGAGA 60.093 45.455 0.00 0.00 29.16 4.04
2527 4749 3.144506 GACATGATTTGATGGCCGAGAT 58.855 45.455 0.00 0.00 0.00 2.75
2528 4750 3.559069 ACATGATTTGATGGCCGAGATT 58.441 40.909 0.00 0.00 0.00 2.40
2529 4751 4.717877 ACATGATTTGATGGCCGAGATTA 58.282 39.130 0.00 0.00 0.00 1.75
2530 4752 5.132502 ACATGATTTGATGGCCGAGATTAA 58.867 37.500 0.00 0.00 0.00 1.40
2531 4753 5.009010 ACATGATTTGATGGCCGAGATTAAC 59.991 40.000 0.00 0.00 0.00 2.01
2532 4754 4.780815 TGATTTGATGGCCGAGATTAACT 58.219 39.130 0.00 0.00 0.00 2.24
2533 4755 4.576053 TGATTTGATGGCCGAGATTAACTG 59.424 41.667 0.00 0.00 0.00 3.16
2534 4756 3.904800 TTGATGGCCGAGATTAACTGA 57.095 42.857 0.00 0.00 0.00 3.41
2535 4757 3.904800 TGATGGCCGAGATTAACTGAA 57.095 42.857 0.00 0.00 0.00 3.02
2536 4758 4.422073 TGATGGCCGAGATTAACTGAAT 57.578 40.909 0.00 0.00 0.00 2.57
2537 4759 4.380531 TGATGGCCGAGATTAACTGAATC 58.619 43.478 0.00 0.00 43.89 2.52
2547 4769 5.254339 GATTAACTGAATCTGCCCCTTTG 57.746 43.478 0.00 0.00 40.84 2.77
2548 4770 1.928868 AACTGAATCTGCCCCTTTGG 58.071 50.000 0.00 0.00 37.09 3.28
2549 4771 1.075601 ACTGAATCTGCCCCTTTGGA 58.924 50.000 0.00 0.00 35.39 3.53
2550 4772 1.642762 ACTGAATCTGCCCCTTTGGAT 59.357 47.619 0.00 0.00 35.39 3.41
2551 4773 2.305009 CTGAATCTGCCCCTTTGGATC 58.695 52.381 0.00 0.00 35.39 3.36
2552 4774 1.925255 TGAATCTGCCCCTTTGGATCT 59.075 47.619 0.00 0.00 35.39 2.75
2553 4775 2.312741 TGAATCTGCCCCTTTGGATCTT 59.687 45.455 0.00 0.00 35.39 2.40
2554 4776 3.245730 TGAATCTGCCCCTTTGGATCTTT 60.246 43.478 0.00 0.00 35.39 2.52
2555 4777 2.999185 TCTGCCCCTTTGGATCTTTT 57.001 45.000 0.00 0.00 35.39 2.27
2556 4778 3.258722 TCTGCCCCTTTGGATCTTTTT 57.741 42.857 0.00 0.00 35.39 1.94
2557 4779 4.396357 TCTGCCCCTTTGGATCTTTTTA 57.604 40.909 0.00 0.00 35.39 1.52
2558 4780 4.946646 TCTGCCCCTTTGGATCTTTTTAT 58.053 39.130 0.00 0.00 35.39 1.40
2559 4781 6.086011 TCTGCCCCTTTGGATCTTTTTATA 57.914 37.500 0.00 0.00 35.39 0.98
2560 4782 6.682537 TCTGCCCCTTTGGATCTTTTTATAT 58.317 36.000 0.00 0.00 35.39 0.86
2561 4783 7.821566 TCTGCCCCTTTGGATCTTTTTATATA 58.178 34.615 0.00 0.00 35.39 0.86
2562 4784 7.944554 TCTGCCCCTTTGGATCTTTTTATATAG 59.055 37.037 0.00 0.00 35.39 1.31
2563 4785 7.821566 TGCCCCTTTGGATCTTTTTATATAGA 58.178 34.615 0.00 0.00 35.39 1.98
2564 4786 8.456124 TGCCCCTTTGGATCTTTTTATATAGAT 58.544 33.333 0.00 0.00 35.39 1.98
2565 4787 9.975218 GCCCCTTTGGATCTTTTTATATAGATA 57.025 33.333 0.00 0.00 35.39 1.98
2667 4909 1.429463 CTTCACGTTGAGTACAGGGC 58.571 55.000 0.00 0.00 0.00 5.19
2670 4912 0.670546 CACGTTGAGTACAGGGCCAG 60.671 60.000 6.18 0.00 0.00 4.85
2711 6250 1.109323 GGTACGTACGTGGGGCCTAT 61.109 60.000 30.25 2.64 0.00 2.57
2779 6318 6.778834 TCTACGTATTCCTTACAACCATCA 57.221 37.500 0.00 0.00 0.00 3.07
2838 6377 6.513180 AGTGTAATACGTGTCCATTCCTATG 58.487 40.000 0.00 0.00 0.00 2.23
2893 6460 8.050778 TCCAAAATACAAGCACTTTATGTAGG 57.949 34.615 0.00 0.00 33.44 3.18
2953 6521 9.830186 TTTATCTGCTATTAGAATCTACTCCCT 57.170 33.333 0.00 0.00 0.00 4.20
2954 6522 7.954666 ATCTGCTATTAGAATCTACTCCCTC 57.045 40.000 0.00 0.00 0.00 4.30
2955 6523 6.249951 TCTGCTATTAGAATCTACTCCCTCC 58.750 44.000 0.00 0.00 0.00 4.30
2956 6524 5.010933 TGCTATTAGAATCTACTCCCTCCG 58.989 45.833 0.00 0.00 0.00 4.63
2957 6525 5.011586 GCTATTAGAATCTACTCCCTCCGT 58.988 45.833 0.00 0.00 0.00 4.69
2958 6526 5.477637 GCTATTAGAATCTACTCCCTCCGTT 59.522 44.000 0.00 0.00 0.00 4.44
2959 6527 6.349528 GCTATTAGAATCTACTCCCTCCGTTC 60.350 46.154 0.00 0.00 0.00 3.95
2960 6528 2.668625 AGAATCTACTCCCTCCGTTCC 58.331 52.381 0.00 0.00 0.00 3.62
2961 6529 2.245287 AGAATCTACTCCCTCCGTTCCT 59.755 50.000 0.00 0.00 0.00 3.36
2962 6530 3.462579 AGAATCTACTCCCTCCGTTCCTA 59.537 47.826 0.00 0.00 0.00 2.94
2963 6531 3.967467 ATCTACTCCCTCCGTTCCTAA 57.033 47.619 0.00 0.00 0.00 2.69
2964 6532 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
2965 6533 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
2966 6534 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
2967 6535 5.961897 TCTACTCCCTCCGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
2968 6536 6.379579 TCTACTCCCTCCGTTCCTAAATATT 58.620 40.000 0.00 0.00 0.00 1.28
2969 6537 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
2970 6538 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
2971 6539 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
2972 6540 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
2973 6541 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
2974 6542 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
2975 6543 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
2976 6544 7.122204 CCCTCCGTTCCTAAATATTTGTCTTTT 59.878 37.037 11.05 0.00 0.00 2.27
2977 6545 8.520351 CCTCCGTTCCTAAATATTTGTCTTTTT 58.480 33.333 11.05 0.00 0.00 1.94
3009 6577 2.595124 TGGACTACCACATACGCATG 57.405 50.000 0.00 0.00 41.77 4.06
3010 6578 1.828595 TGGACTACCACATACGCATGT 59.171 47.619 0.00 0.00 46.58 3.21
3011 6579 3.025262 TGGACTACCACATACGCATGTA 58.975 45.455 0.00 0.00 43.73 2.29
3012 6580 3.639561 TGGACTACCACATACGCATGTAT 59.360 43.478 0.00 0.00 43.73 2.29
3013 6581 4.828387 TGGACTACCACATACGCATGTATA 59.172 41.667 0.00 0.00 43.73 1.47
3014 6582 5.479027 TGGACTACCACATACGCATGTATAT 59.521 40.000 0.00 0.00 43.73 0.86
3015 6583 6.660094 TGGACTACCACATACGCATGTATATA 59.340 38.462 0.00 0.00 43.73 0.86
3016 6584 7.148137 TGGACTACCACATACGCATGTATATAG 60.148 40.741 0.00 6.32 43.73 1.31
3017 6585 7.066645 GGACTACCACATACGCATGTATATAGA 59.933 40.741 15.11 0.00 43.73 1.98
3018 6586 7.759465 ACTACCACATACGCATGTATATAGAC 58.241 38.462 15.11 0.00 43.73 2.59
3019 6587 6.584185 ACCACATACGCATGTATATAGACA 57.416 37.500 2.07 2.07 43.73 3.41
3020 6588 7.170393 ACCACATACGCATGTATATAGACAT 57.830 36.000 7.18 7.18 43.73 3.06
3021 6589 8.288689 ACCACATACGCATGTATATAGACATA 57.711 34.615 12.47 0.00 43.73 2.29
3022 6590 8.914011 ACCACATACGCATGTATATAGACATAT 58.086 33.333 12.47 4.84 43.73 1.78
3023 6591 9.750125 CCACATACGCATGTATATAGACATATT 57.250 33.333 12.47 3.39 43.73 1.28
3051 6619 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
3052 6620 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
3053 6621 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
3054 6622 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
3055 6623 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
3056 6624 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
3057 6625 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
3058 6626 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
3059 6627 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
3060 6628 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
3061 6629 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
3062 6630 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
3063 6631 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
3064 6632 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
3065 6633 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
3066 6634 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
3067 6635 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
3068 6636 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
3069 6637 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
3070 6638 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
3071 6639 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
3072 6640 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
3073 6641 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
3074 6642 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
3075 6643 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
3076 6644 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
3077 6645 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
3078 6646 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
3079 6647 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
3080 6648 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
3081 6649 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
3082 6650 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
3083 6651 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
3084 6652 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
3085 6653 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
3086 6654 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
3087 6655 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
3088 6656 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
3089 6657 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
3105 6673 9.454859 AGAAAGACAAATATTTAGGAACTGAGG 57.545 33.333 0.00 0.00 41.52 3.86
3106 6674 8.581253 AAAGACAAATATTTAGGAACTGAGGG 57.419 34.615 0.00 0.00 41.52 4.30
3107 6675 7.510675 AGACAAATATTTAGGAACTGAGGGA 57.489 36.000 0.00 0.00 41.52 4.20
3108 6676 7.569240 AGACAAATATTTAGGAACTGAGGGAG 58.431 38.462 0.00 0.00 41.52 4.30
3109 6677 7.182930 AGACAAATATTTAGGAACTGAGGGAGT 59.817 37.037 0.00 0.00 41.52 3.85
3110 6678 8.388656 ACAAATATTTAGGAACTGAGGGAGTA 57.611 34.615 0.00 0.00 41.52 2.59
3130 6698 6.292221 GGAGTATAAAAGCTTGCTAAGTACGC 60.292 42.308 0.00 0.44 0.00 4.42
3141 6709 0.318360 TAAGTACGCCGCGATGGATG 60.318 55.000 21.79 0.00 42.00 3.51
3148 6716 0.517316 GCCGCGATGGATGGATTTAC 59.483 55.000 8.23 0.00 42.00 2.01
3392 6961 2.434884 CGGCTCGAGTGGTGCATT 60.435 61.111 15.13 0.00 36.87 3.56
3452 7021 1.524621 CCGGCTGAACCTATGGCAG 60.525 63.158 0.00 0.00 35.61 4.85
3562 7131 3.947910 AGTTTGTCCTGCATCATTTGG 57.052 42.857 0.00 0.00 0.00 3.28
3603 7172 9.479549 ACATATCTTCCTTGTATTTGTTGGAAT 57.520 29.630 0.00 0.00 36.39 3.01
3721 7294 2.147436 TTGGCGATTGTTTTCAAGGC 57.853 45.000 0.00 0.00 43.41 4.35
3741 7314 8.934697 TCAAGGCCACTATACTTTGAATAGTAT 58.065 33.333 5.01 0.00 42.46 2.12
3861 7437 8.719596 TGAATATTATTAAGGCTGAACTGGGTA 58.280 33.333 0.00 0.00 0.00 3.69
3864 7440 9.930158 ATATTATTAAGGCTGAACTGGGTAAAA 57.070 29.630 0.00 0.00 0.00 1.52
3868 7444 3.690460 AGGCTGAACTGGGTAAAATCTG 58.310 45.455 0.00 0.00 0.00 2.90
3890 7466 3.192212 GGATGAAAGAGGAAACTGCCTTG 59.808 47.826 0.00 0.00 44.43 3.61
3967 7545 2.364324 TCCACGCCCTTGCTAACTATAG 59.636 50.000 0.00 0.00 34.43 1.31
4004 7582 3.806949 TTGACCAAGCTAAATGGACCT 57.193 42.857 9.96 0.00 40.56 3.85
4011 7589 1.565759 AGCTAAATGGACCTGATGGCA 59.434 47.619 0.00 0.00 36.63 4.92
4022 7600 4.384208 GGACCTGATGGCACTGTTACTTAT 60.384 45.833 0.00 0.00 36.63 1.73
4090 7670 7.139896 ACATGTTTTCTTTTGAACCAAAACC 57.860 32.000 0.00 0.00 38.24 3.27
4106 7686 9.178758 GAACCAAAACCTGATATTCACTTAGAT 57.821 33.333 0.00 0.00 0.00 1.98
4148 7730 5.858381 TGAGTGAGTTACTGCAGAAGAAAT 58.142 37.500 23.35 10.47 40.53 2.17
4149 7731 5.698089 TGAGTGAGTTACTGCAGAAGAAATG 59.302 40.000 23.35 0.00 40.53 2.32
4150 7732 4.453819 AGTGAGTTACTGCAGAAGAAATGC 59.546 41.667 23.35 4.13 44.11 3.56
4151 7733 4.453819 GTGAGTTACTGCAGAAGAAATGCT 59.546 41.667 23.35 6.37 44.17 3.79
4152 7734 5.639506 GTGAGTTACTGCAGAAGAAATGCTA 59.360 40.000 23.35 0.00 44.17 3.49
4153 7735 5.639506 TGAGTTACTGCAGAAGAAATGCTAC 59.360 40.000 23.35 2.99 44.17 3.58
4154 7736 5.799213 AGTTACTGCAGAAGAAATGCTACT 58.201 37.500 23.35 5.13 44.17 2.57
4155 7737 5.872070 AGTTACTGCAGAAGAAATGCTACTC 59.128 40.000 23.35 0.00 44.17 2.59
4156 7738 3.604582 ACTGCAGAAGAAATGCTACTCC 58.395 45.455 23.35 0.00 44.17 3.85
4193 7776 1.861575 GAGGAAGAGATAAAAGCCGCG 59.138 52.381 0.00 0.00 0.00 6.46
4202 7785 4.632153 AGATAAAAGCCGCGATTATGAGT 58.368 39.130 8.23 0.00 0.00 3.41
4210 7793 3.484229 GCCGCGATTATGAGTTCATATGC 60.484 47.826 8.23 6.95 38.49 3.14
4239 7822 1.693640 CCTGGCCCTGATGGACTTT 59.306 57.895 0.00 0.00 45.70 2.66
4272 7855 5.032846 TCTACCAAACATTCTGGGATCTCT 58.967 41.667 0.00 0.00 38.36 3.10
4283 7866 6.829985 TTCTGGGATCTCTGGATAAAATGA 57.170 37.500 0.00 0.00 31.46 2.57
4297 7880 8.450578 TGGATAAAATGACTTTATGTGGCTAG 57.549 34.615 0.00 0.00 39.79 3.42
4303 7886 9.686683 AAAATGACTTTATGTGGCTAGTAAGAT 57.313 29.630 0.00 0.00 0.00 2.40
4336 7919 9.787532 AAAATGGTAATCTTGATGTATTTCGTG 57.212 29.630 0.00 0.00 0.00 4.35
4357 7940 8.542497 TCGTGTGAACTTTGCTATTATTACTT 57.458 30.769 0.00 0.00 0.00 2.24
4358 7941 8.653338 TCGTGTGAACTTTGCTATTATTACTTC 58.347 33.333 0.00 0.00 0.00 3.01
4421 8004 9.706691 TTTCAGACCTATTAGTTTGAGTAACTG 57.293 33.333 0.00 0.00 46.46 3.16
4468 8051 6.049149 GCTATGACAAGTAGCCTATTTGTGA 58.951 40.000 16.24 9.28 38.50 3.58
4482 8065 7.014615 AGCCTATTTGTGACAGAATTGTTTCTT 59.985 33.333 0.00 0.00 40.28 2.52
4511 8094 9.208022 AGTCAAACTACTTTTATTACCGGTAAC 57.792 33.333 28.78 11.13 0.00 2.50
4512 8095 8.987890 GTCAAACTACTTTTATTACCGGTAACA 58.012 33.333 28.78 16.07 0.00 2.41
4513 8096 8.987890 TCAAACTACTTTTATTACCGGTAACAC 58.012 33.333 28.78 0.00 0.00 3.32
4514 8097 8.992073 CAAACTACTTTTATTACCGGTAACACT 58.008 33.333 28.78 15.99 0.00 3.55
4516 8099 9.639601 AACTACTTTTATTACCGGTAACACTAC 57.360 33.333 28.78 0.00 0.00 2.73
4517 8100 8.802267 ACTACTTTTATTACCGGTAACACTACA 58.198 33.333 28.78 8.55 0.00 2.74
4518 8101 9.638239 CTACTTTTATTACCGGTAACACTACAA 57.362 33.333 28.78 15.06 0.00 2.41
4519 8102 8.310406 ACTTTTATTACCGGTAACACTACAAC 57.690 34.615 28.78 0.00 0.00 3.32
4520 8103 7.930865 ACTTTTATTACCGGTAACACTACAACA 59.069 33.333 28.78 3.29 0.00 3.33
4521 8104 8.668510 TTTTATTACCGGTAACACTACAACAA 57.331 30.769 28.78 4.38 0.00 2.83
4522 8105 8.668510 TTTATTACCGGTAACACTACAACAAA 57.331 30.769 28.78 13.62 0.00 2.83
4523 8106 8.668510 TTATTACCGGTAACACTACAACAAAA 57.331 30.769 28.78 4.03 0.00 2.44
4524 8107 4.880886 ACCGGTAACACTACAACAAAAC 57.119 40.909 4.49 0.00 0.00 2.43
4525 8108 4.260170 ACCGGTAACACTACAACAAAACA 58.740 39.130 4.49 0.00 0.00 2.83
4526 8109 4.333372 ACCGGTAACACTACAACAAAACAG 59.667 41.667 4.49 0.00 0.00 3.16
4527 8110 4.571580 CCGGTAACACTACAACAAAACAGA 59.428 41.667 0.00 0.00 0.00 3.41
4528 8111 5.237779 CCGGTAACACTACAACAAAACAGAT 59.762 40.000 0.00 0.00 0.00 2.90
4529 8112 6.238538 CCGGTAACACTACAACAAAACAGATT 60.239 38.462 0.00 0.00 0.00 2.40
4530 8113 7.041916 CCGGTAACACTACAACAAAACAGATTA 60.042 37.037 0.00 0.00 0.00 1.75
4531 8114 8.336806 CGGTAACACTACAACAAAACAGATTAA 58.663 33.333 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 4.622740 GCGATGCTTATGTGAAAAAGCTTT 59.377 37.500 5.69 5.69 46.57 3.51
173 174 4.060900 AGATACGGCTGCATTCATGTTAG 58.939 43.478 0.50 0.00 0.00 2.34
192 193 5.258051 TCGTTTTGGGGTTATGCTTTAGAT 58.742 37.500 0.00 0.00 0.00 1.98
233 234 4.613925 ATGGTGCGATCTATGATGTCTT 57.386 40.909 0.00 0.00 0.00 3.01
289 290 1.265635 TGAAACACCACAGCGTAATGC 59.734 47.619 0.00 0.00 46.98 3.56
345 346 8.463930 TGAGTTATGAGTTTGGTCTTCATTTT 57.536 30.769 0.00 0.00 0.00 1.82
376 377 1.208052 ACGATCTGATTGTGGAGGTGG 59.792 52.381 9.73 0.00 0.00 4.61
422 423 8.242729 AGAATTTCAGAGTGAAGTGGAAAATT 57.757 30.769 0.00 0.00 37.70 1.82
495 496 5.763698 CACAGATGATTTGAGCAGATATGGT 59.236 40.000 0.00 0.00 0.00 3.55
593 594 4.094887 GGAGCGAGCAACTGATTTATTGAA 59.905 41.667 0.00 0.00 0.00 2.69
594 595 3.623060 GGAGCGAGCAACTGATTTATTGA 59.377 43.478 0.00 0.00 0.00 2.57
601 602 1.339438 ACAATGGAGCGAGCAACTGAT 60.339 47.619 0.00 0.00 0.00 2.90
626 627 6.946583 GTGGGACCTAAACCTATCTTTTTCTT 59.053 38.462 0.00 0.00 0.00 2.52
631 632 5.791141 AGAAGTGGGACCTAAACCTATCTTT 59.209 40.000 0.00 0.00 0.00 2.52
632 633 5.351405 AGAAGTGGGACCTAAACCTATCTT 58.649 41.667 0.00 0.00 0.00 2.40
633 634 4.961585 AGAAGTGGGACCTAAACCTATCT 58.038 43.478 0.00 0.00 0.00 1.98
634 635 5.695424 AAGAAGTGGGACCTAAACCTATC 57.305 43.478 0.00 0.00 0.00 2.08
635 636 7.418712 CGATTAAGAAGTGGGACCTAAACCTAT 60.419 40.741 0.00 0.00 0.00 2.57
636 637 6.127253 CGATTAAGAAGTGGGACCTAAACCTA 60.127 42.308 0.00 0.00 0.00 3.08
637 638 5.338137 CGATTAAGAAGTGGGACCTAAACCT 60.338 44.000 0.00 0.00 0.00 3.50
638 639 4.874396 CGATTAAGAAGTGGGACCTAAACC 59.126 45.833 0.00 0.00 0.00 3.27
639 640 5.727434 TCGATTAAGAAGTGGGACCTAAAC 58.273 41.667 0.00 0.00 0.00 2.01
640 641 5.718130 TCTCGATTAAGAAGTGGGACCTAAA 59.282 40.000 0.00 0.00 0.00 1.85
641 642 5.266788 TCTCGATTAAGAAGTGGGACCTAA 58.733 41.667 0.00 0.00 0.00 2.69
642 643 4.863548 TCTCGATTAAGAAGTGGGACCTA 58.136 43.478 0.00 0.00 0.00 3.08
643 644 3.709587 TCTCGATTAAGAAGTGGGACCT 58.290 45.455 0.00 0.00 0.00 3.85
644 645 4.501743 GGATCTCGATTAAGAAGTGGGACC 60.502 50.000 0.00 0.00 0.00 4.46
650 651 3.632604 TCGCTGGATCTCGATTAAGAAGT 59.367 43.478 0.00 0.00 0.00 3.01
679 680 4.042251 CAGAGAGTCCTGGGGTCC 57.958 66.667 0.00 0.00 0.00 4.46
685 686 3.326297 AGGTTTCTTTCCAGAGAGTCCTG 59.674 47.826 2.56 2.56 32.95 3.86
686 687 3.592865 AGGTTTCTTTCCAGAGAGTCCT 58.407 45.455 0.00 0.00 0.00 3.85
688 689 5.405873 CGTTAAGGTTTCTTTCCAGAGAGTC 59.594 44.000 0.00 0.00 34.59 3.36
689 690 5.163332 ACGTTAAGGTTTCTTTCCAGAGAGT 60.163 40.000 0.00 0.00 34.59 3.24
690 691 5.298347 ACGTTAAGGTTTCTTTCCAGAGAG 58.702 41.667 0.00 0.00 34.59 3.20
691 692 5.286267 ACGTTAAGGTTTCTTTCCAGAGA 57.714 39.130 0.00 0.00 34.59 3.10
692 693 5.638234 CCTACGTTAAGGTTTCTTTCCAGAG 59.362 44.000 6.07 0.00 34.59 3.35
693 694 5.511888 CCCTACGTTAAGGTTTCTTTCCAGA 60.512 44.000 6.07 0.00 34.56 3.86
694 695 4.694037 CCCTACGTTAAGGTTTCTTTCCAG 59.306 45.833 6.07 0.00 34.56 3.86
695 696 4.102996 ACCCTACGTTAAGGTTTCTTTCCA 59.897 41.667 6.07 0.00 34.56 3.53
696 697 4.645535 ACCCTACGTTAAGGTTTCTTTCC 58.354 43.478 6.07 0.00 34.56 3.13
790 1223 1.608055 TCTTCGTTCTCCACCGTGTA 58.392 50.000 0.00 0.00 0.00 2.90
834 1273 3.202001 AGTGTGGTGTGTGTGCGC 61.202 61.111 0.00 0.00 0.00 6.09
836 1275 2.016961 CTCAGTGTGGTGTGTGTGC 58.983 57.895 0.00 0.00 0.00 4.57
887 1327 5.437060 ACACAAGGACTAATCAACACTGTT 58.563 37.500 0.00 0.00 0.00 3.16
901 1341 1.280457 ATGGAGGAGGACACAAGGAC 58.720 55.000 0.00 0.00 0.00 3.85
1001 1515 0.750546 CCAGTAGGTCGATCCGGACA 60.751 60.000 6.12 0.00 41.99 4.02
1019 1533 5.874810 TCTGTATTAAACATCTCAGTGCACC 59.125 40.000 14.63 0.00 37.50 5.01
1044 1558 5.279006 GCAGACCGATCCATATCTTCTGTAA 60.279 44.000 12.03 0.00 39.66 2.41
1054 1568 2.666317 TCTCTTGCAGACCGATCCATA 58.334 47.619 0.00 0.00 0.00 2.74
1123 1662 3.554692 CGAGACGAACCATGCCGC 61.555 66.667 0.00 0.00 0.00 6.53
1318 1857 1.654954 CCGACGAGGACGAGGTTGAT 61.655 60.000 0.00 0.00 45.00 2.57
1357 1896 2.834549 AGATGTTGTCCGAGATGTCCTT 59.165 45.455 0.00 0.00 0.00 3.36
1368 1907 2.191128 AGGTGCAAGAGATGTTGTCC 57.809 50.000 0.00 0.00 0.00 4.02
1373 1912 0.108138 GGCGTAGGTGCAAGAGATGT 60.108 55.000 0.00 0.00 36.28 3.06
1498 2049 9.423061 CCAAGTTTCGGAAATTTCATTAGATTT 57.577 29.630 19.49 3.43 0.00 2.17
1503 2054 7.278461 TGTCCAAGTTTCGGAAATTTCATTA 57.722 32.000 19.49 1.70 33.29 1.90
1600 2161 6.811665 GTCCATTAGTTTTGGGATGCTTTAAC 59.188 38.462 0.00 0.00 34.85 2.01
1663 3204 4.640771 AAGATGGCTACAGTGGAAGAAA 57.359 40.909 0.00 0.00 0.00 2.52
1666 3207 8.506168 TTTTATTAAGATGGCTACAGTGGAAG 57.494 34.615 0.00 0.00 0.00 3.46
1667 3208 8.107095 ACTTTTATTAAGATGGCTACAGTGGAA 58.893 33.333 0.00 0.00 0.00 3.53
1731 3272 5.763698 GTGTTTAGCCTTCTGTTTTCCTAGT 59.236 40.000 0.00 0.00 0.00 2.57
1752 3293 3.150903 ATGTTGCCTGCCAGGGTGT 62.151 57.895 13.78 0.00 35.37 4.16
1803 3344 5.106317 ACATCCATTTTTGCGACGAGTAATT 60.106 36.000 0.00 0.00 0.00 1.40
1805 3346 3.749088 ACATCCATTTTTGCGACGAGTAA 59.251 39.130 0.00 0.00 0.00 2.24
1807 3348 2.151202 ACATCCATTTTTGCGACGAGT 58.849 42.857 0.00 0.00 0.00 4.18
1808 3349 2.900122 ACATCCATTTTTGCGACGAG 57.100 45.000 0.00 0.00 0.00 4.18
1809 3350 4.188462 AGATACATCCATTTTTGCGACGA 58.812 39.130 0.00 0.00 0.00 4.20
1810 3351 4.536364 AGATACATCCATTTTTGCGACG 57.464 40.909 0.00 0.00 0.00 5.12
1811 3352 6.604735 AGTAGATACATCCATTTTTGCGAC 57.395 37.500 0.00 0.00 0.00 5.19
1812 3353 7.985184 ACTAAGTAGATACATCCATTTTTGCGA 59.015 33.333 0.00 0.00 0.00 5.10
1813 3354 8.142994 ACTAAGTAGATACATCCATTTTTGCG 57.857 34.615 0.00 0.00 0.00 4.85
1826 3367 9.928236 CGACTACAAAACCTACTAAGTAGATAC 57.072 37.037 0.00 0.00 38.29 2.24
1828 3369 7.416101 GCCGACTACAAAACCTACTAAGTAGAT 60.416 40.741 0.00 0.00 38.29 1.98
1830 3371 6.032717 GCCGACTACAAAACCTACTAAGTAG 58.967 44.000 0.00 0.00 36.04 2.57
1831 3372 5.476599 TGCCGACTACAAAACCTACTAAGTA 59.523 40.000 0.00 0.00 0.00 2.24
1832 3373 4.281688 TGCCGACTACAAAACCTACTAAGT 59.718 41.667 0.00 0.00 0.00 2.24
1833 3374 4.813027 TGCCGACTACAAAACCTACTAAG 58.187 43.478 0.00 0.00 0.00 2.18
1911 3700 0.447801 CGCCTTGTACAGGTGCATTC 59.552 55.000 15.24 0.00 46.50 2.67
1919 3708 0.108804 ACGTCCATCGCCTTGTACAG 60.109 55.000 0.00 0.00 44.19 2.74
1920 3709 1.135315 GTACGTCCATCGCCTTGTACA 60.135 52.381 0.00 0.00 44.19 2.90
1921 3710 1.135315 TGTACGTCCATCGCCTTGTAC 60.135 52.381 0.00 0.00 44.19 2.90
1922 3711 1.175654 TGTACGTCCATCGCCTTGTA 58.824 50.000 0.00 0.00 44.19 2.41
1923 3712 0.319083 TTGTACGTCCATCGCCTTGT 59.681 50.000 0.00 0.00 44.19 3.16
1924 3713 0.999406 CTTGTACGTCCATCGCCTTG 59.001 55.000 0.00 0.00 44.19 3.61
1971 3771 6.764379 TCACCTGCCAAATATATACGATCAA 58.236 36.000 0.00 0.00 0.00 2.57
2167 3967 3.650950 AACATCCCCGGCAGCACT 61.651 61.111 0.00 0.00 0.00 4.40
2288 4088 8.747471 AGAAAAGTTGTACTAGGTGGTAGTATC 58.253 37.037 0.00 0.00 44.46 2.24
2327 4549 3.004944 TGCACGTACACATTGACTAGTCA 59.995 43.478 21.74 21.74 37.91 3.41
2328 4550 3.571571 TGCACGTACACATTGACTAGTC 58.428 45.455 16.32 16.32 0.00 2.59
2329 4551 3.653539 TGCACGTACACATTGACTAGT 57.346 42.857 0.00 0.00 0.00 2.57
2330 4552 4.724885 GCATTGCACGTACACATTGACTAG 60.725 45.833 3.15 0.00 0.00 2.57
2332 4554 2.095768 GCATTGCACGTACACATTGACT 60.096 45.455 3.15 0.00 0.00 3.41
2333 4555 2.241722 GCATTGCACGTACACATTGAC 58.758 47.619 3.15 1.49 0.00 3.18
2334 4556 1.876156 TGCATTGCACGTACACATTGA 59.124 42.857 7.38 0.00 31.71 2.57
2346 4568 5.539979 ACTTACAAATCAATGTGCATTGCA 58.460 33.333 17.36 7.38 45.77 4.08
2347 4569 7.760131 ATACTTACAAATCAATGTGCATTGC 57.240 32.000 17.36 0.46 45.77 3.56
2373 4595 8.710239 TCCTACTTAATATCCACATGCACTTAA 58.290 33.333 0.00 0.00 0.00 1.85
2375 4597 7.136822 TCCTACTTAATATCCACATGCACTT 57.863 36.000 0.00 0.00 0.00 3.16
2376 4598 6.747414 TCCTACTTAATATCCACATGCACT 57.253 37.500 0.00 0.00 0.00 4.40
2377 4599 9.672673 AATATCCTACTTAATATCCACATGCAC 57.327 33.333 0.00 0.00 0.00 4.57
2404 4626 9.847706 TTGTTAATCACATAATAACACGCAAAT 57.152 25.926 0.00 0.00 38.77 2.32
2405 4627 9.847706 ATTGTTAATCACATAATAACACGCAAA 57.152 25.926 0.00 0.00 38.77 3.68
2432 4654 8.682710 ACGTGCAGTTAATTTCATACCAAATAT 58.317 29.630 0.00 0.00 0.00 1.28
2433 4655 8.046294 ACGTGCAGTTAATTTCATACCAAATA 57.954 30.769 0.00 0.00 0.00 1.40
2434 4656 6.919721 ACGTGCAGTTAATTTCATACCAAAT 58.080 32.000 0.00 0.00 0.00 2.32
2435 4657 6.320494 ACGTGCAGTTAATTTCATACCAAA 57.680 33.333 0.00 0.00 0.00 3.28
2436 4658 5.950758 ACGTGCAGTTAATTTCATACCAA 57.049 34.783 0.00 0.00 0.00 3.67
2437 4659 5.950758 AACGTGCAGTTAATTTCATACCA 57.049 34.783 0.00 0.00 42.14 3.25
2448 4670 5.683743 GCTCAACAATTTTAACGTGCAGTTA 59.316 36.000 0.00 0.00 43.86 2.24
2449 4671 4.502645 GCTCAACAATTTTAACGTGCAGTT 59.497 37.500 0.00 6.74 46.36 3.16
2450 4672 4.041723 GCTCAACAATTTTAACGTGCAGT 58.958 39.130 0.00 0.00 0.00 4.40
2451 4673 3.117832 CGCTCAACAATTTTAACGTGCAG 59.882 43.478 0.00 0.00 0.00 4.41
2452 4674 3.039405 CGCTCAACAATTTTAACGTGCA 58.961 40.909 0.00 0.00 0.00 4.57
2453 4675 2.403698 CCGCTCAACAATTTTAACGTGC 59.596 45.455 0.00 0.00 0.00 5.34
2454 4676 3.623863 ACCGCTCAACAATTTTAACGTG 58.376 40.909 0.00 0.00 0.00 4.49
2455 4677 3.605231 CGACCGCTCAACAATTTTAACGT 60.605 43.478 0.00 0.00 0.00 3.99
2456 4678 2.900046 CGACCGCTCAACAATTTTAACG 59.100 45.455 0.00 0.00 0.00 3.18
2457 4679 3.904234 GTCGACCGCTCAACAATTTTAAC 59.096 43.478 3.51 0.00 0.00 2.01
2458 4680 3.560481 TGTCGACCGCTCAACAATTTTAA 59.440 39.130 14.12 0.00 0.00 1.52
2459 4681 3.132160 TGTCGACCGCTCAACAATTTTA 58.868 40.909 14.12 0.00 0.00 1.52
2460 4682 1.944024 TGTCGACCGCTCAACAATTTT 59.056 42.857 14.12 0.00 0.00 1.82
2461 4683 1.588674 TGTCGACCGCTCAACAATTT 58.411 45.000 14.12 0.00 0.00 1.82
2462 4684 1.808411 ATGTCGACCGCTCAACAATT 58.192 45.000 14.12 0.00 0.00 2.32
2463 4685 1.464608 CAATGTCGACCGCTCAACAAT 59.535 47.619 14.12 0.00 0.00 2.71
2464 4686 0.865111 CAATGTCGACCGCTCAACAA 59.135 50.000 14.12 0.00 0.00 2.83
2465 4687 0.032815 TCAATGTCGACCGCTCAACA 59.967 50.000 14.12 0.00 0.00 3.33
2466 4688 1.126846 CTTCAATGTCGACCGCTCAAC 59.873 52.381 14.12 0.00 0.00 3.18
2467 4689 1.428448 CTTCAATGTCGACCGCTCAA 58.572 50.000 14.12 0.00 0.00 3.02
2468 4690 1.014044 GCTTCAATGTCGACCGCTCA 61.014 55.000 14.12 0.00 0.00 4.26
2469 4691 1.014044 TGCTTCAATGTCGACCGCTC 61.014 55.000 14.12 0.00 0.00 5.03
2470 4692 0.391661 ATGCTTCAATGTCGACCGCT 60.392 50.000 14.12 0.00 0.00 5.52
2471 4693 0.447801 AATGCTTCAATGTCGACCGC 59.552 50.000 14.12 6.60 0.00 5.68
2472 4694 2.002586 AGAATGCTTCAATGTCGACCG 58.997 47.619 14.12 1.43 0.00 4.79
2473 4695 3.557595 CCTAGAATGCTTCAATGTCGACC 59.442 47.826 14.12 0.00 0.00 4.79
2474 4696 4.184629 ACCTAGAATGCTTCAATGTCGAC 58.815 43.478 9.11 9.11 0.00 4.20
2475 4697 4.471904 ACCTAGAATGCTTCAATGTCGA 57.528 40.909 0.00 0.00 0.00 4.20
2476 4698 4.393062 ACAACCTAGAATGCTTCAATGTCG 59.607 41.667 0.00 0.00 0.00 4.35
2477 4699 5.886960 ACAACCTAGAATGCTTCAATGTC 57.113 39.130 0.00 0.00 0.00 3.06
2478 4700 5.047802 CCAACAACCTAGAATGCTTCAATGT 60.048 40.000 0.00 0.00 0.00 2.71
2479 4701 5.183713 TCCAACAACCTAGAATGCTTCAATG 59.816 40.000 0.00 0.00 0.00 2.82
2480 4702 5.324409 TCCAACAACCTAGAATGCTTCAAT 58.676 37.500 0.00 0.00 0.00 2.57
2481 4703 4.724399 TCCAACAACCTAGAATGCTTCAA 58.276 39.130 0.00 0.00 0.00 2.69
2482 4704 4.365514 TCCAACAACCTAGAATGCTTCA 57.634 40.909 0.00 0.00 0.00 3.02
2483 4705 5.415701 TCAATCCAACAACCTAGAATGCTTC 59.584 40.000 0.00 0.00 0.00 3.86
2484 4706 5.183904 GTCAATCCAACAACCTAGAATGCTT 59.816 40.000 0.00 0.00 0.00 3.91
2485 4707 4.702131 GTCAATCCAACAACCTAGAATGCT 59.298 41.667 0.00 0.00 0.00 3.79
2486 4708 4.458989 TGTCAATCCAACAACCTAGAATGC 59.541 41.667 0.00 0.00 0.00 3.56
2487 4709 6.375174 TCATGTCAATCCAACAACCTAGAATG 59.625 38.462 0.00 0.00 0.00 2.67
2488 4710 6.484288 TCATGTCAATCCAACAACCTAGAAT 58.516 36.000 0.00 0.00 0.00 2.40
2489 4711 5.875224 TCATGTCAATCCAACAACCTAGAA 58.125 37.500 0.00 0.00 0.00 2.10
2490 4712 5.497464 TCATGTCAATCCAACAACCTAGA 57.503 39.130 0.00 0.00 0.00 2.43
2491 4713 6.764308 AATCATGTCAATCCAACAACCTAG 57.236 37.500 0.00 0.00 0.00 3.02
2492 4714 6.718912 TCAAATCATGTCAATCCAACAACCTA 59.281 34.615 0.00 0.00 0.00 3.08
2493 4715 5.539574 TCAAATCATGTCAATCCAACAACCT 59.460 36.000 0.00 0.00 0.00 3.50
2494 4716 5.782047 TCAAATCATGTCAATCCAACAACC 58.218 37.500 0.00 0.00 0.00 3.77
2495 4717 6.311935 CCATCAAATCATGTCAATCCAACAAC 59.688 38.462 0.00 0.00 0.00 3.32
2496 4718 6.399743 CCATCAAATCATGTCAATCCAACAA 58.600 36.000 0.00 0.00 0.00 2.83
2497 4719 5.624967 GCCATCAAATCATGTCAATCCAACA 60.625 40.000 0.00 0.00 0.00 3.33
2498 4720 4.807304 GCCATCAAATCATGTCAATCCAAC 59.193 41.667 0.00 0.00 0.00 3.77
2499 4721 4.141892 GGCCATCAAATCATGTCAATCCAA 60.142 41.667 0.00 0.00 0.00 3.53
2500 4722 3.385433 GGCCATCAAATCATGTCAATCCA 59.615 43.478 0.00 0.00 0.00 3.41
2501 4723 3.551454 CGGCCATCAAATCATGTCAATCC 60.551 47.826 2.24 0.00 0.00 3.01
2502 4724 3.316029 TCGGCCATCAAATCATGTCAATC 59.684 43.478 2.24 0.00 0.00 2.67
2503 4725 3.289836 TCGGCCATCAAATCATGTCAAT 58.710 40.909 2.24 0.00 0.00 2.57
2504 4726 2.684374 CTCGGCCATCAAATCATGTCAA 59.316 45.455 2.24 0.00 0.00 3.18
2505 4727 2.093021 TCTCGGCCATCAAATCATGTCA 60.093 45.455 2.24 0.00 0.00 3.58
2506 4728 2.564771 TCTCGGCCATCAAATCATGTC 58.435 47.619 2.24 0.00 0.00 3.06
2507 4729 2.715749 TCTCGGCCATCAAATCATGT 57.284 45.000 2.24 0.00 0.00 3.21
2508 4730 5.240183 AGTTAATCTCGGCCATCAAATCATG 59.760 40.000 2.24 0.00 0.00 3.07
2509 4731 5.240183 CAGTTAATCTCGGCCATCAAATCAT 59.760 40.000 2.24 0.00 0.00 2.45
2510 4732 4.576053 CAGTTAATCTCGGCCATCAAATCA 59.424 41.667 2.24 0.00 0.00 2.57
2511 4733 4.816385 TCAGTTAATCTCGGCCATCAAATC 59.184 41.667 2.24 0.00 0.00 2.17
2512 4734 4.780815 TCAGTTAATCTCGGCCATCAAAT 58.219 39.130 2.24 0.00 0.00 2.32
2513 4735 4.214986 TCAGTTAATCTCGGCCATCAAA 57.785 40.909 2.24 0.00 0.00 2.69
2514 4736 3.904800 TCAGTTAATCTCGGCCATCAA 57.095 42.857 2.24 0.00 0.00 2.57
2515 4737 3.904800 TTCAGTTAATCTCGGCCATCA 57.095 42.857 2.24 0.00 0.00 3.07
2516 4738 4.999751 GATTCAGTTAATCTCGGCCATC 57.000 45.455 2.24 0.00 40.82 3.51
2523 4745 9.913041 TCCAAAGGGGCAGATTCAGTTAATCTC 62.913 44.444 0.00 0.00 42.93 2.75
2524 4746 8.234643 TCCAAAGGGGCAGATTCAGTTAATCT 62.235 42.308 0.00 0.00 44.74 2.40
2525 4747 4.098501 CCAAAGGGGCAGATTCAGTTAATC 59.901 45.833 0.00 0.00 43.81 1.75
2526 4748 4.026052 CCAAAGGGGCAGATTCAGTTAAT 58.974 43.478 0.00 0.00 0.00 1.40
2527 4749 3.075283 TCCAAAGGGGCAGATTCAGTTAA 59.925 43.478 0.00 0.00 36.21 2.01
2528 4750 2.647299 TCCAAAGGGGCAGATTCAGTTA 59.353 45.455 0.00 0.00 36.21 2.24
2529 4751 1.428912 TCCAAAGGGGCAGATTCAGTT 59.571 47.619 0.00 0.00 36.21 3.16
2530 4752 1.075601 TCCAAAGGGGCAGATTCAGT 58.924 50.000 0.00 0.00 36.21 3.41
2531 4753 2.091994 AGATCCAAAGGGGCAGATTCAG 60.092 50.000 0.00 0.00 36.21 3.02
2532 4754 1.925255 AGATCCAAAGGGGCAGATTCA 59.075 47.619 0.00 0.00 36.21 2.57
2533 4755 2.744352 AGATCCAAAGGGGCAGATTC 57.256 50.000 0.00 0.00 36.21 2.52
2534 4756 3.479866 AAAGATCCAAAGGGGCAGATT 57.520 42.857 0.00 0.00 36.21 2.40
2535 4757 3.479866 AAAAGATCCAAAGGGGCAGAT 57.520 42.857 0.00 0.00 36.21 2.90
2536 4758 2.999185 AAAAGATCCAAAGGGGCAGA 57.001 45.000 0.00 0.00 36.21 4.26
2537 4759 6.983906 ATATAAAAAGATCCAAAGGGGCAG 57.016 37.500 0.00 0.00 36.21 4.85
2538 4760 7.821566 TCTATATAAAAAGATCCAAAGGGGCA 58.178 34.615 0.00 0.00 36.21 5.36
2539 4761 8.885693 ATCTATATAAAAAGATCCAAAGGGGC 57.114 34.615 0.00 0.00 36.21 5.80
2667 4909 4.697514 ACATTGTACATCGATTCCTCTGG 58.302 43.478 0.00 0.00 0.00 3.86
2670 4912 4.747108 CCTGACATTGTACATCGATTCCTC 59.253 45.833 0.00 0.00 0.00 3.71
2948 6516 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
2949 6517 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
2950 6518 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
2974 6542 9.974980 GTGGTAGTCCATTTGAAATCTTTAAAA 57.025 29.630 0.00 0.00 46.20 1.52
2975 6543 9.137459 TGTGGTAGTCCATTTGAAATCTTTAAA 57.863 29.630 0.00 0.00 46.20 1.52
2976 6544 8.698973 TGTGGTAGTCCATTTGAAATCTTTAA 57.301 30.769 0.00 0.00 46.20 1.52
2977 6545 8.877864 ATGTGGTAGTCCATTTGAAATCTTTA 57.122 30.769 0.00 0.00 46.20 1.85
2978 6546 7.781324 ATGTGGTAGTCCATTTGAAATCTTT 57.219 32.000 0.00 0.00 46.20 2.52
2979 6547 7.065803 CGTATGTGGTAGTCCATTTGAAATCTT 59.934 37.037 0.00 0.00 46.20 2.40
2980 6548 6.538742 CGTATGTGGTAGTCCATTTGAAATCT 59.461 38.462 0.00 0.00 46.20 2.40
2981 6549 6.715464 CGTATGTGGTAGTCCATTTGAAATC 58.285 40.000 0.00 0.00 46.20 2.17
2982 6550 5.065988 GCGTATGTGGTAGTCCATTTGAAAT 59.934 40.000 0.00 0.00 46.20 2.17
2983 6551 4.393680 GCGTATGTGGTAGTCCATTTGAAA 59.606 41.667 0.00 0.00 46.20 2.69
2984 6552 3.936453 GCGTATGTGGTAGTCCATTTGAA 59.064 43.478 0.00 0.00 46.20 2.69
2985 6553 3.055747 TGCGTATGTGGTAGTCCATTTGA 60.056 43.478 0.00 0.00 46.20 2.69
2986 6554 3.266636 TGCGTATGTGGTAGTCCATTTG 58.733 45.455 0.00 0.00 46.20 2.32
2987 6555 3.620427 TGCGTATGTGGTAGTCCATTT 57.380 42.857 0.00 0.00 46.20 2.32
2988 6556 3.118408 ACATGCGTATGTGGTAGTCCATT 60.118 43.478 18.78 0.00 45.54 3.16
2989 6557 2.434336 ACATGCGTATGTGGTAGTCCAT 59.566 45.455 18.78 0.00 45.54 3.41
2990 6558 1.828595 ACATGCGTATGTGGTAGTCCA 59.171 47.619 18.78 0.00 45.54 4.02
2991 6559 2.596904 ACATGCGTATGTGGTAGTCC 57.403 50.000 18.78 0.00 45.54 3.85
2992 6560 7.909121 GTCTATATACATGCGTATGTGGTAGTC 59.091 40.741 26.72 17.66 46.63 2.59
2993 6561 7.392393 TGTCTATATACATGCGTATGTGGTAGT 59.608 37.037 26.72 11.78 46.63 2.73
2994 6562 7.758495 TGTCTATATACATGCGTATGTGGTAG 58.242 38.462 26.72 22.10 46.63 3.18
2995 6563 7.690952 TGTCTATATACATGCGTATGTGGTA 57.309 36.000 26.72 19.06 46.63 3.25
2996 6564 6.584185 TGTCTATATACATGCGTATGTGGT 57.416 37.500 26.72 17.69 46.63 4.16
2997 6565 9.750125 AATATGTCTATATACATGCGTATGTGG 57.250 33.333 26.72 12.41 46.63 4.17
3029 6597 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
3030 6598 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
3031 6599 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
3032 6600 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
3033 6601 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
3034 6602 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
3035 6603 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
3036 6604 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
3037 6605 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
3038 6606 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
3039 6607 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
3040 6608 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
3041 6609 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
3042 6610 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
3043 6611 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
3044 6612 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
3045 6613 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
3046 6614 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
3047 6615 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
3048 6616 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
3049 6617 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
3050 6618 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
3051 6619 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
3052 6620 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
3053 6621 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
3055 6623 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
3056 6624 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
3057 6625 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
3058 6626 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
3059 6627 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
3060 6628 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
3061 6629 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
3062 6630 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
3063 6631 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
3079 6647 9.454859 CCTCAGTTCCTAAATATTTGTCTTTCT 57.545 33.333 11.05 0.48 0.00 2.52
3080 6648 8.678199 CCCTCAGTTCCTAAATATTTGTCTTTC 58.322 37.037 11.05 0.00 0.00 2.62
3081 6649 8.390921 TCCCTCAGTTCCTAAATATTTGTCTTT 58.609 33.333 11.05 0.00 0.00 2.52
3082 6650 7.928873 TCCCTCAGTTCCTAAATATTTGTCTT 58.071 34.615 11.05 0.00 0.00 3.01
3083 6651 7.182930 ACTCCCTCAGTTCCTAAATATTTGTCT 59.817 37.037 11.05 0.00 26.56 3.41
3084 6652 7.339482 ACTCCCTCAGTTCCTAAATATTTGTC 58.661 38.462 11.05 0.00 26.56 3.18
3085 6653 7.272144 ACTCCCTCAGTTCCTAAATATTTGT 57.728 36.000 11.05 0.00 26.56 2.83
3091 6659 7.993758 GCTTTTATACTCCCTCAGTTCCTAAAT 59.006 37.037 0.00 0.00 36.43 1.40
3092 6660 7.182206 AGCTTTTATACTCCCTCAGTTCCTAAA 59.818 37.037 0.00 0.00 36.43 1.85
3093 6661 6.672657 AGCTTTTATACTCCCTCAGTTCCTAA 59.327 38.462 0.00 0.00 36.43 2.69
3094 6662 6.203072 AGCTTTTATACTCCCTCAGTTCCTA 58.797 40.000 0.00 0.00 36.43 2.94
3095 6663 5.033522 AGCTTTTATACTCCCTCAGTTCCT 58.966 41.667 0.00 0.00 36.43 3.36
3096 6664 5.360649 AGCTTTTATACTCCCTCAGTTCC 57.639 43.478 0.00 0.00 36.43 3.62
3097 6665 5.065346 GCAAGCTTTTATACTCCCTCAGTTC 59.935 44.000 0.00 0.00 36.43 3.01
3098 6666 4.944317 GCAAGCTTTTATACTCCCTCAGTT 59.056 41.667 0.00 0.00 36.43 3.16
3099 6667 4.226168 AGCAAGCTTTTATACTCCCTCAGT 59.774 41.667 0.00 0.00 39.41 3.41
3100 6668 4.775236 AGCAAGCTTTTATACTCCCTCAG 58.225 43.478 0.00 0.00 0.00 3.35
3101 6669 4.844349 AGCAAGCTTTTATACTCCCTCA 57.156 40.909 0.00 0.00 0.00 3.86
3102 6670 6.350103 ACTTAGCAAGCTTTTATACTCCCTC 58.650 40.000 0.00 0.00 0.00 4.30
3103 6671 6.314899 ACTTAGCAAGCTTTTATACTCCCT 57.685 37.500 0.00 0.00 0.00 4.20
3104 6672 6.200475 CGTACTTAGCAAGCTTTTATACTCCC 59.800 42.308 0.00 0.00 0.00 4.30
3105 6673 6.292221 GCGTACTTAGCAAGCTTTTATACTCC 60.292 42.308 0.00 0.00 34.19 3.85
3106 6674 6.292221 GGCGTACTTAGCAAGCTTTTATACTC 60.292 42.308 0.00 0.00 36.08 2.59
3107 6675 5.522824 GGCGTACTTAGCAAGCTTTTATACT 59.477 40.000 0.00 0.00 36.08 2.12
3108 6676 5.555818 CGGCGTACTTAGCAAGCTTTTATAC 60.556 44.000 0.00 0.00 36.08 1.47
3109 6677 4.505191 CGGCGTACTTAGCAAGCTTTTATA 59.495 41.667 0.00 0.00 36.08 0.98
3110 6678 3.308866 CGGCGTACTTAGCAAGCTTTTAT 59.691 43.478 0.00 0.00 36.08 1.40
3130 6698 1.531149 GTGTAAATCCATCCATCGCGG 59.469 52.381 6.13 0.00 0.00 6.46
3141 6709 4.153958 TGATTGTGTTGCGTGTAAATCC 57.846 40.909 0.00 0.00 0.00 3.01
3148 6716 1.971284 CAACGATGATTGTGTTGCGTG 59.029 47.619 0.00 0.00 36.87 5.34
3302 6871 1.336702 GCTCTGGCATACTCATCCGAG 60.337 57.143 0.00 0.00 40.77 4.63
3452 7021 1.627550 GGCGCTGGAAACGAACTCTC 61.628 60.000 7.64 0.00 0.00 3.20
3492 7061 0.309302 TTGTTGATGACGTTTGGCCG 59.691 50.000 0.00 0.00 0.00 6.13
3562 7131 6.924060 GGAAGATATGTGTACATACAGACCAC 59.076 42.308 6.85 0.00 41.15 4.16
3603 7172 9.851686 AATAATGATTGCCTCTAAGACATACAA 57.148 29.630 0.00 0.00 0.00 2.41
3685 7254 9.897744 CAATCGCCAATATATAGTTTCACAAAT 57.102 29.630 0.00 0.00 0.00 2.32
3705 7274 1.000274 AGTGGCCTTGAAAACAATCGC 60.000 47.619 3.32 0.00 0.00 4.58
3721 7294 9.539139 CGACGTATACTATTCAAAGTATAGTGG 57.461 37.037 0.56 3.96 42.68 4.00
3741 7314 8.169977 AGGGATTTTAGTTGTATATCGACGTA 57.830 34.615 0.00 0.00 35.69 3.57
3830 7406 9.732130 AGTTCAGCCTTAATAATATTCATCCTC 57.268 33.333 0.00 0.00 0.00 3.71
3861 7437 6.294955 GCAGTTTCCTCTTTCATCCAGATTTT 60.295 38.462 0.00 0.00 0.00 1.82
3864 7440 4.268359 GCAGTTTCCTCTTTCATCCAGAT 58.732 43.478 0.00 0.00 0.00 2.90
3868 7444 3.078891 AGGCAGTTTCCTCTTTCATCC 57.921 47.619 0.00 0.00 0.00 3.51
3890 7466 8.723942 TTTTTCTATCTCTAGATCTTTGCCAC 57.276 34.615 0.00 0.00 33.98 5.01
3967 7545 6.662414 TGGTCAAATGATTCTTACGATGTC 57.338 37.500 0.00 0.00 0.00 3.06
4004 7582 7.041721 CAGAAGTATAAGTAACAGTGCCATCA 58.958 38.462 0.00 0.00 0.00 3.07
4022 7600 7.661536 AGCTACTTCCAACATATCAGAAGTA 57.338 36.000 10.17 10.17 45.31 2.24
4118 7698 5.186603 TCTGCAGTAACTCACTCATTCAGAT 59.813 40.000 14.67 0.00 34.26 2.90
4130 7712 5.872070 AGTAGCATTTCTTCTGCAGTAACTC 59.128 40.000 14.67 0.00 42.15 3.01
4179 7762 4.686554 ACTCATAATCGCGGCTTTTATCTC 59.313 41.667 6.13 0.00 0.00 2.75
4193 7776 7.625817 GCATCACCAGCATATGAACTCATAATC 60.626 40.741 6.97 0.00 41.60 1.75
4202 7785 1.479205 GGGGCATCACCAGCATATGAA 60.479 52.381 6.97 0.00 42.05 2.57
4272 7855 8.052748 ACTAGCCACATAAAGTCATTTTATCCA 58.947 33.333 0.00 0.00 39.41 3.41
4320 7903 7.351981 CAAAGTTCACACGAAATACATCAAGA 58.648 34.615 0.00 0.00 31.43 3.02
4357 7940 8.777578 TTAGCATTAGACACTTTAGGGATAGA 57.222 34.615 0.00 0.00 0.00 1.98
4358 7941 8.091449 CCTTAGCATTAGACACTTTAGGGATAG 58.909 40.741 0.00 0.00 0.00 2.08
4454 8037 6.743575 ACAATTCTGTCACAAATAGGCTAC 57.256 37.500 0.00 0.00 0.00 3.58
4482 8065 9.777297 ACCGGTAATAAAAGTAGTTTGACTTTA 57.223 29.630 4.49 0.00 46.52 1.85
4505 8088 5.721876 TCTGTTTTGTTGTAGTGTTACCG 57.278 39.130 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.