Multiple sequence alignment - TraesCS3D01G446200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G446200 chr3D 100.000 6553 0 0 1 6553 554954839 554961391 0.000000e+00 12102.0
1 TraesCS3D01G446200 chr3D 88.366 361 42 0 40 400 464321179 464321539 1.010000e-117 435.0
2 TraesCS3D01G446200 chr3D 86.133 375 50 2 32 405 349655194 349655567 2.850000e-108 403.0
3 TraesCS3D01G446200 chr3D 83.696 184 19 3 1 183 401889959 401890132 5.260000e-36 163.0
4 TraesCS3D01G446200 chr3D 97.297 37 1 0 1 37 352747935 352747971 5.490000e-06 63.9
5 TraesCS3D01G446200 chr3B 96.664 4946 154 3 1424 6365 737767792 737762854 0.000000e+00 8209.0
6 TraesCS3D01G446200 chr3B 88.994 636 42 13 283 916 737769178 737768569 0.000000e+00 761.0
7 TraesCS3D01G446200 chr3B 95.349 215 8 1 1122 1336 737768291 737768079 2.260000e-89 340.0
8 TraesCS3D01G446200 chr3B 92.935 184 4 5 6360 6538 737762453 737762274 6.520000e-65 259.0
9 TraesCS3D01G446200 chr3A 97.492 4146 75 12 2071 6216 691715333 691711217 0.000000e+00 7053.0
10 TraesCS3D01G446200 chr3A 80.000 140 12 7 6395 6519 691710997 691710859 9.050000e-14 89.8
11 TraesCS3D01G446200 chrUn 75.038 1955 374 74 1954 3833 248487137 248489052 0.000000e+00 802.0
12 TraesCS3D01G446200 chr7A 75.250 1899 353 72 2012 3834 726711965 726710108 0.000000e+00 795.0
13 TraesCS3D01G446200 chr7A 79.492 1063 187 22 2184 3235 5527007 5528049 0.000000e+00 726.0
14 TraesCS3D01G446200 chr7A 79.511 1064 185 24 2184 3235 6235483 6236525 0.000000e+00 726.0
15 TraesCS3D01G446200 chr7A 85.901 383 53 1 409 790 701123321 701123703 2.200000e-109 407.0
16 TraesCS3D01G446200 chr7A 78.764 259 52 3 3584 3840 729279188 729278931 3.140000e-38 171.0
17 TraesCS3D01G446200 chr7A 75.263 190 43 4 5350 5537 726740834 726741021 3.260000e-13 87.9
18 TraesCS3D01G446200 chr7A 95.122 41 2 0 1 41 184928189 184928149 1.530000e-06 65.8
19 TraesCS3D01G446200 chr6A 76.015 1551 315 43 1969 3478 613927540 613929074 0.000000e+00 750.0
20 TraesCS3D01G446200 chr6A 79.882 169 26 4 5157 5324 613953196 613953357 4.150000e-22 117.0
21 TraesCS3D01G446200 chr6D 77.482 1279 261 22 1978 3235 467801636 467800364 0.000000e+00 741.0
22 TraesCS3D01G446200 chr6D 78.464 1133 226 16 2111 3233 467814833 467813709 0.000000e+00 725.0
23 TraesCS3D01G446200 chr6D 77.498 1151 233 22 2096 3233 467829422 467830559 0.000000e+00 667.0
24 TraesCS3D01G446200 chr6D 88.148 405 46 2 1 405 396914593 396914191 1.280000e-131 481.0
25 TraesCS3D01G446200 chr7D 78.565 1157 220 23 2096 3235 631060410 631059265 0.000000e+00 737.0
26 TraesCS3D01G446200 chr7D 76.307 861 172 28 1954 2794 631273572 631274420 1.310000e-116 431.0
27 TraesCS3D01G446200 chr7D 87.805 369 35 4 40 405 98628025 98628386 2.180000e-114 424.0
28 TraesCS3D01G446200 chr7D 75.661 189 44 2 5350 5537 631057051 631056864 7.000000e-15 93.5
29 TraesCS3D01G446200 chr5D 76.301 1038 226 18 2208 3235 553967395 553966368 2.690000e-148 536.0
30 TraesCS3D01G446200 chr5D 76.558 1011 215 21 2233 3232 554142998 554143997 9.670000e-148 534.0
31 TraesCS3D01G446200 chr5D 75.553 1039 226 27 2208 3232 554345751 554346775 2.750000e-133 486.0
32 TraesCS3D01G446200 chr5D 87.661 389 42 5 408 793 444908943 444908558 1.300000e-121 448.0
33 TraesCS3D01G446200 chr5D 85.396 404 52 6 1 397 297227853 297227450 4.730000e-111 412.0
34 TraesCS3D01G446200 chr1D 90.437 366 35 0 40 405 95444102 95444467 3.550000e-132 483.0
35 TraesCS3D01G446200 chr1D 87.848 395 42 5 409 800 481638894 481639285 5.990000e-125 459.0
36 TraesCS3D01G446200 chr1D 87.467 383 46 2 409 790 314981089 314980708 2.170000e-119 440.0
37 TraesCS3D01G446200 chr5B 76.591 880 178 24 2208 3073 696438186 696439051 5.990000e-125 459.0
38 TraesCS3D01G446200 chr5B 87.013 385 45 5 409 790 401002440 401002822 4.690000e-116 429.0
39 TraesCS3D01G446200 chr5B 100.000 29 0 0 2231 2259 705983786 705983758 3.000000e-03 54.7
40 TraesCS3D01G446200 chr2B 88.594 377 43 0 414 790 385174509 385174885 5.990000e-125 459.0
41 TraesCS3D01G446200 chr2B 90.698 43 4 0 1 43 249910603 249910561 2.550000e-04 58.4
42 TraesCS3D01G446200 chr4D 87.565 386 47 1 409 793 6070068 6069683 4.660000e-121 446.0
43 TraesCS3D01G446200 chr4D 88.140 371 42 2 35 405 474944354 474944722 2.170000e-119 440.0
44 TraesCS3D01G446200 chr4D 87.206 383 48 1 409 790 42274068 42274450 1.010000e-117 435.0
45 TraesCS3D01G446200 chr4D 94.595 37 2 0 1 37 509247791 509247827 2.550000e-04 58.4
46 TraesCS3D01G446200 chr2D 86.614 381 48 3 409 787 150376041 150376420 1.020000e-112 418.0
47 TraesCS3D01G446200 chr2D 86.885 366 48 0 40 405 325346196 325345831 1.700000e-110 411.0
48 TraesCS3D01G446200 chr6B 86.076 395 44 4 6 400 508624628 508625011 1.310000e-111 414.0
49 TraesCS3D01G446200 chr6B 75.938 320 72 5 5145 5463 713723480 713723795 6.800000e-35 159.0
50 TraesCS3D01G446200 chr7B 80.233 258 48 3 3584 3840 739395711 739395456 2.410000e-44 191.0
51 TraesCS3D01G446200 chr2A 78.832 274 51 5 1017 1288 710352932 710353200 1.880000e-40 178.0
52 TraesCS3D01G446200 chr2A 81.308 107 10 6 1 107 13098958 13098862 1.960000e-10 78.7
53 TraesCS3D01G446200 chr5A 100.000 30 0 0 1 30 613149753 613149782 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G446200 chr3D 554954839 554961391 6552 False 12102.00 12102 100.0000 1 6553 1 chr3D.!!$F5 6552
1 TraesCS3D01G446200 chr3B 737762274 737769178 6904 True 2392.25 8209 93.4855 283 6538 4 chr3B.!!$R1 6255
2 TraesCS3D01G446200 chr3A 691710859 691715333 4474 True 3571.40 7053 88.7460 2071 6519 2 chr3A.!!$R1 4448
3 TraesCS3D01G446200 chrUn 248487137 248489052 1915 False 802.00 802 75.0380 1954 3833 1 chrUn.!!$F1 1879
4 TraesCS3D01G446200 chr7A 726710108 726711965 1857 True 795.00 795 75.2500 2012 3834 1 chr7A.!!$R2 1822
5 TraesCS3D01G446200 chr7A 5527007 5528049 1042 False 726.00 726 79.4920 2184 3235 1 chr7A.!!$F1 1051
6 TraesCS3D01G446200 chr7A 6235483 6236525 1042 False 726.00 726 79.5110 2184 3235 1 chr7A.!!$F2 1051
7 TraesCS3D01G446200 chr6A 613927540 613929074 1534 False 750.00 750 76.0150 1969 3478 1 chr6A.!!$F1 1509
8 TraesCS3D01G446200 chr6D 467800364 467801636 1272 True 741.00 741 77.4820 1978 3235 1 chr6D.!!$R2 1257
9 TraesCS3D01G446200 chr6D 467813709 467814833 1124 True 725.00 725 78.4640 2111 3233 1 chr6D.!!$R3 1122
10 TraesCS3D01G446200 chr6D 467829422 467830559 1137 False 667.00 667 77.4980 2096 3233 1 chr6D.!!$F1 1137
11 TraesCS3D01G446200 chr7D 631273572 631274420 848 False 431.00 431 76.3070 1954 2794 1 chr7D.!!$F2 840
12 TraesCS3D01G446200 chr7D 631056864 631060410 3546 True 415.25 737 77.1130 2096 5537 2 chr7D.!!$R1 3441
13 TraesCS3D01G446200 chr5D 553966368 553967395 1027 True 536.00 536 76.3010 2208 3235 1 chr5D.!!$R3 1027
14 TraesCS3D01G446200 chr5D 554142998 554143997 999 False 534.00 534 76.5580 2233 3232 1 chr5D.!!$F1 999
15 TraesCS3D01G446200 chr5D 554345751 554346775 1024 False 486.00 486 75.5530 2208 3232 1 chr5D.!!$F2 1024
16 TraesCS3D01G446200 chr5B 696438186 696439051 865 False 459.00 459 76.5910 2208 3073 1 chr5B.!!$F2 865

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
113 114 0.037590 CACCAAATCCACCCCGAAGA 59.962 55.000 0.00 0.0 0.00 2.87 F
941 976 0.037590 ACTCCGACTCTGCTCTCACT 59.962 55.000 0.00 0.0 0.00 3.41 F
1325 1399 0.271927 AAGCCCCCTAGATCCATCCA 59.728 55.000 0.00 0.0 0.00 3.41 F
1723 1994 0.387929 AGAAACGTGGAGCGAGTGAA 59.612 50.000 0.00 0.0 44.77 3.18 F
3487 3831 1.001020 ATGCTCATGTTTGGCCGGA 60.001 52.632 5.05 0.0 0.00 5.14 F
4717 5088 3.159213 TGATGTCCAGGCAAACAGAAT 57.841 42.857 0.00 0.0 0.00 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1109 1144 0.039617 GAGCCTCTCGATGTCATCCG 60.040 60.000 7.25 3.2 0.00 4.18 R
1914 2188 0.250901 TTTGGCTCCTCAACCTCAGC 60.251 55.000 0.00 0.0 0.00 4.26 R
2148 2437 4.212847 CCGTATGATTTCTGCCTTCTCATG 59.787 45.833 0.00 0.0 0.00 3.07 R
3550 3894 5.116882 GCTCAAGGGTAAACGAAGTATCAT 58.883 41.667 0.00 0.0 45.00 2.45 R
5126 5497 2.968156 TGCCCCGACAAACGTTCG 60.968 61.111 0.00 0.2 40.78 3.95 R
6344 6857 0.462789 GCCAGCTGCATAAAGGCATT 59.537 50.000 8.66 0.0 43.97 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 3.368248 CCAAATATGGGGCAGATATGGG 58.632 50.000 0.00 0.00 43.51 4.00
28 29 3.368248 CAAATATGGGGCAGATATGGGG 58.632 50.000 0.00 0.00 0.00 4.96
29 30 1.612035 ATATGGGGCAGATATGGGGG 58.388 55.000 0.00 0.00 0.00 5.40
30 31 0.198437 TATGGGGCAGATATGGGGGT 59.802 55.000 0.00 0.00 0.00 4.95
31 32 1.437849 ATGGGGCAGATATGGGGGTG 61.438 60.000 0.00 0.00 0.00 4.61
32 33 2.116125 GGGCAGATATGGGGGTGC 59.884 66.667 0.00 0.00 35.07 5.01
34 35 2.116125 GCAGATATGGGGGTGCCC 59.884 66.667 0.00 0.00 44.51 5.36
35 36 2.431683 CAGATATGGGGGTGCCCG 59.568 66.667 0.54 0.00 46.66 6.13
36 37 2.854032 AGATATGGGGGTGCCCGG 60.854 66.667 0.00 0.00 46.66 5.73
37 38 2.852075 GATATGGGGGTGCCCGGA 60.852 66.667 0.73 0.00 46.66 5.14
38 39 3.175710 ATATGGGGGTGCCCGGAC 61.176 66.667 0.73 0.00 46.66 4.79
63 64 3.576356 GGCATGCCCATCACGTCG 61.576 66.667 27.24 0.00 0.00 5.12
64 65 3.576356 GCATGCCCATCACGTCGG 61.576 66.667 6.36 0.00 0.00 4.79
65 66 2.186644 CATGCCCATCACGTCGGA 59.813 61.111 0.00 0.00 0.00 4.55
66 67 2.173669 CATGCCCATCACGTCGGAC 61.174 63.158 0.00 0.00 0.00 4.79
67 68 3.385749 ATGCCCATCACGTCGGACC 62.386 63.158 1.91 0.00 0.00 4.46
68 69 4.832608 GCCCATCACGTCGGACCC 62.833 72.222 1.91 0.00 0.00 4.46
69 70 4.508128 CCCATCACGTCGGACCCG 62.508 72.222 1.91 1.31 41.35 5.28
70 71 3.445687 CCATCACGTCGGACCCGA 61.446 66.667 7.11 7.11 46.87 5.14
91 92 4.733542 CCCGACGCCACCCCAAAT 62.734 66.667 0.00 0.00 0.00 2.32
92 93 2.675075 CCGACGCCACCCCAAATT 60.675 61.111 0.00 0.00 0.00 1.82
93 94 2.566010 CGACGCCACCCCAAATTG 59.434 61.111 0.00 0.00 0.00 2.32
94 95 2.261361 GACGCCACCCCAAATTGC 59.739 61.111 0.00 0.00 0.00 3.56
95 96 2.522923 ACGCCACCCCAAATTGCA 60.523 55.556 0.00 0.00 0.00 4.08
96 97 2.048316 CGCCACCCCAAATTGCAC 60.048 61.111 0.00 0.00 0.00 4.57
97 98 2.347114 GCCACCCCAAATTGCACC 59.653 61.111 0.00 0.00 0.00 5.01
98 99 2.515071 GCCACCCCAAATTGCACCA 61.515 57.895 0.00 0.00 0.00 4.17
99 100 2.049627 GCCACCCCAAATTGCACCAA 62.050 55.000 0.00 0.00 0.00 3.67
100 101 0.471617 CCACCCCAAATTGCACCAAA 59.528 50.000 0.00 0.00 0.00 3.28
101 102 1.073603 CCACCCCAAATTGCACCAAAT 59.926 47.619 0.00 0.00 0.00 2.32
102 103 2.425539 CACCCCAAATTGCACCAAATC 58.574 47.619 0.00 0.00 0.00 2.17
103 104 1.350684 ACCCCAAATTGCACCAAATCC 59.649 47.619 0.00 0.00 0.00 3.01
104 105 1.350351 CCCCAAATTGCACCAAATCCA 59.650 47.619 0.00 0.00 0.00 3.41
105 106 2.425539 CCCAAATTGCACCAAATCCAC 58.574 47.619 0.00 0.00 0.00 4.02
106 107 2.425539 CCAAATTGCACCAAATCCACC 58.574 47.619 0.00 0.00 0.00 4.61
107 108 2.425539 CAAATTGCACCAAATCCACCC 58.574 47.619 0.00 0.00 0.00 4.61
108 109 0.983467 AATTGCACCAAATCCACCCC 59.017 50.000 0.00 0.00 0.00 4.95
109 110 1.257055 ATTGCACCAAATCCACCCCG 61.257 55.000 0.00 0.00 0.00 5.73
110 111 2.034999 GCACCAAATCCACCCCGA 59.965 61.111 0.00 0.00 0.00 5.14
111 112 1.605165 GCACCAAATCCACCCCGAA 60.605 57.895 0.00 0.00 0.00 4.30
112 113 1.595093 GCACCAAATCCACCCCGAAG 61.595 60.000 0.00 0.00 0.00 3.79
113 114 0.037590 CACCAAATCCACCCCGAAGA 59.962 55.000 0.00 0.00 0.00 2.87
114 115 0.037734 ACCAAATCCACCCCGAAGAC 59.962 55.000 0.00 0.00 0.00 3.01
115 116 0.679960 CCAAATCCACCCCGAAGACC 60.680 60.000 0.00 0.00 0.00 3.85
116 117 0.037590 CAAATCCACCCCGAAGACCA 59.962 55.000 0.00 0.00 0.00 4.02
117 118 0.328258 AAATCCACCCCGAAGACCAG 59.672 55.000 0.00 0.00 0.00 4.00
118 119 2.198304 AATCCACCCCGAAGACCAGC 62.198 60.000 0.00 0.00 0.00 4.85
119 120 4.410400 CCACCCCGAAGACCAGCC 62.410 72.222 0.00 0.00 0.00 4.85
120 121 4.760047 CACCCCGAAGACCAGCCG 62.760 72.222 0.00 0.00 0.00 5.52
123 124 3.470888 CCCGAAGACCAGCCGGAT 61.471 66.667 5.05 0.00 45.58 4.18
124 125 2.107141 CCGAAGACCAGCCGGATC 59.893 66.667 5.05 0.00 45.58 3.36
125 126 2.107141 CGAAGACCAGCCGGATCC 59.893 66.667 5.05 0.00 35.59 3.36
126 127 2.721167 CGAAGACCAGCCGGATCCA 61.721 63.158 13.41 0.00 35.59 3.41
127 128 1.832912 GAAGACCAGCCGGATCCAT 59.167 57.895 13.41 0.00 35.59 3.41
128 129 0.181350 GAAGACCAGCCGGATCCATT 59.819 55.000 13.41 0.00 35.59 3.16
129 130 0.625849 AAGACCAGCCGGATCCATTT 59.374 50.000 13.41 0.00 35.59 2.32
130 131 0.107017 AGACCAGCCGGATCCATTTG 60.107 55.000 13.41 5.99 35.59 2.32
131 132 1.728490 GACCAGCCGGATCCATTTGC 61.728 60.000 13.41 8.44 35.59 3.68
132 133 1.454479 CCAGCCGGATCCATTTGCT 60.454 57.895 13.41 10.69 0.00 3.91
133 134 0.179020 CCAGCCGGATCCATTTGCTA 60.179 55.000 13.41 0.00 0.00 3.49
134 135 1.546323 CCAGCCGGATCCATTTGCTAT 60.546 52.381 13.41 0.00 0.00 2.97
135 136 1.808945 CAGCCGGATCCATTTGCTATC 59.191 52.381 13.41 0.00 0.00 2.08
136 137 1.701847 AGCCGGATCCATTTGCTATCT 59.298 47.619 13.41 0.00 0.00 1.98
137 138 2.079925 GCCGGATCCATTTGCTATCTC 58.920 52.381 13.41 0.00 0.00 2.75
138 139 2.704572 CCGGATCCATTTGCTATCTCC 58.295 52.381 13.41 0.00 0.00 3.71
139 140 2.304180 CCGGATCCATTTGCTATCTCCT 59.696 50.000 13.41 0.00 0.00 3.69
140 141 3.594134 CGGATCCATTTGCTATCTCCTC 58.406 50.000 13.41 0.00 0.00 3.71
141 142 3.260380 CGGATCCATTTGCTATCTCCTCT 59.740 47.826 13.41 0.00 0.00 3.69
142 143 4.620332 CGGATCCATTTGCTATCTCCTCTC 60.620 50.000 13.41 0.00 0.00 3.20
143 144 4.531732 GGATCCATTTGCTATCTCCTCTCT 59.468 45.833 6.95 0.00 0.00 3.10
144 145 5.012975 GGATCCATTTGCTATCTCCTCTCTT 59.987 44.000 6.95 0.00 0.00 2.85
145 146 5.543507 TCCATTTGCTATCTCCTCTCTTC 57.456 43.478 0.00 0.00 0.00 2.87
146 147 5.215069 TCCATTTGCTATCTCCTCTCTTCT 58.785 41.667 0.00 0.00 0.00 2.85
147 148 5.664908 TCCATTTGCTATCTCCTCTCTTCTT 59.335 40.000 0.00 0.00 0.00 2.52
148 149 5.990996 CCATTTGCTATCTCCTCTCTTCTTC 59.009 44.000 0.00 0.00 0.00 2.87
149 150 5.606348 TTTGCTATCTCCTCTCTTCTTCC 57.394 43.478 0.00 0.00 0.00 3.46
150 151 4.534647 TGCTATCTCCTCTCTTCTTCCT 57.465 45.455 0.00 0.00 0.00 3.36
151 152 4.469657 TGCTATCTCCTCTCTTCTTCCTC 58.530 47.826 0.00 0.00 0.00 3.71
152 153 3.826729 GCTATCTCCTCTCTTCTTCCTCC 59.173 52.174 0.00 0.00 0.00 4.30
153 154 4.447762 GCTATCTCCTCTCTTCTTCCTCCT 60.448 50.000 0.00 0.00 0.00 3.69
154 155 3.662759 TCTCCTCTCTTCTTCCTCCTC 57.337 52.381 0.00 0.00 0.00 3.71
155 156 2.243736 TCTCCTCTCTTCTTCCTCCTCC 59.756 54.545 0.00 0.00 0.00 4.30
156 157 1.064314 TCCTCTCTTCTTCCTCCTCCG 60.064 57.143 0.00 0.00 0.00 4.63
157 158 0.744281 CTCTCTTCTTCCTCCTCCGC 59.256 60.000 0.00 0.00 0.00 5.54
158 159 1.032657 TCTCTTCTTCCTCCTCCGCG 61.033 60.000 0.00 0.00 0.00 6.46
159 160 2.202810 CTTCTTCCTCCTCCGCGC 60.203 66.667 0.00 0.00 0.00 6.86
160 161 3.724914 CTTCTTCCTCCTCCGCGCC 62.725 68.421 0.00 0.00 0.00 6.53
169 170 4.838486 CTCCGCGCCGTCTGTCTC 62.838 72.222 0.00 0.00 0.00 3.36
176 177 4.838486 CCGTCTGTCTCGCGCTCC 62.838 72.222 5.56 0.00 0.00 4.70
215 216 2.507944 CCATTCCCAGGCTCTCCG 59.492 66.667 0.00 0.00 37.47 4.63
216 217 2.370445 CCATTCCCAGGCTCTCCGT 61.370 63.158 0.00 0.00 37.47 4.69
217 218 1.144936 CATTCCCAGGCTCTCCGTC 59.855 63.158 0.00 0.00 37.47 4.79
218 219 2.427245 ATTCCCAGGCTCTCCGTCG 61.427 63.158 0.00 0.00 37.47 5.12
221 222 2.829003 CCAGGCTCTCCGTCGCTA 60.829 66.667 0.00 0.00 37.47 4.26
222 223 2.718731 CAGGCTCTCCGTCGCTAG 59.281 66.667 0.00 0.00 37.47 3.42
223 224 3.213402 AGGCTCTCCGTCGCTAGC 61.213 66.667 4.06 4.06 37.47 3.42
224 225 3.213402 GGCTCTCCGTCGCTAGCT 61.213 66.667 13.93 0.00 35.30 3.32
225 226 2.025441 GCTCTCCGTCGCTAGCTG 59.975 66.667 13.93 6.69 32.18 4.24
226 227 2.025441 CTCTCCGTCGCTAGCTGC 59.975 66.667 13.93 4.23 38.57 5.25
235 236 2.587473 GCTAGCTGCGGAAGAGCC 60.587 66.667 7.70 0.00 35.70 4.70
236 237 2.107953 CTAGCTGCGGAAGAGCCC 59.892 66.667 0.00 0.00 35.70 5.19
237 238 2.364317 TAGCTGCGGAAGAGCCCT 60.364 61.111 0.00 0.00 35.70 5.19
238 239 2.362329 CTAGCTGCGGAAGAGCCCTC 62.362 65.000 0.00 0.00 35.70 4.30
239 240 4.847444 GCTGCGGAAGAGCCCTCC 62.847 72.222 0.00 0.00 36.02 4.30
240 241 4.168291 CTGCGGAAGAGCCCTCCC 62.168 72.222 0.00 0.00 36.02 4.30
241 242 4.722535 TGCGGAAGAGCCCTCCCT 62.723 66.667 0.00 0.00 36.02 4.20
242 243 3.403558 GCGGAAGAGCCCTCCCTT 61.404 66.667 0.00 0.00 0.00 3.95
243 244 2.904131 CGGAAGAGCCCTCCCTTC 59.096 66.667 0.00 0.00 38.37 3.46
245 246 4.490266 GAAGAGCCCTCCCTTCCT 57.510 61.111 0.00 0.00 34.30 3.36
246 247 2.217106 GAAGAGCCCTCCCTTCCTC 58.783 63.158 0.00 0.00 34.30 3.71
247 248 1.681486 GAAGAGCCCTCCCTTCCTCG 61.681 65.000 0.00 0.00 34.30 4.63
248 249 3.855853 GAGCCCTCCCTTCCTCGC 61.856 72.222 0.00 0.00 0.00 5.03
293 294 2.510691 CGCCACCGTGGTACATCC 60.511 66.667 18.95 0.14 44.52 3.51
294 295 2.510691 GCCACCGTGGTACATCCG 60.511 66.667 18.95 0.00 44.52 4.18
375 376 3.363341 TGCGATTTTGTGAGGGAAAAC 57.637 42.857 0.00 0.00 0.00 2.43
380 381 4.485163 GATTTTGTGAGGGAAAACGATGG 58.515 43.478 0.00 0.00 0.00 3.51
430 432 5.589050 CAGAAATCCAGAAGATCAAGATGCA 59.411 40.000 0.00 0.00 32.47 3.96
439 441 2.699321 AGATCAAGATGCAGCTCAGCTA 59.301 45.455 4.22 0.00 41.22 3.32
458 460 4.096081 AGCTAATGAACTTTCTGCAGATGC 59.904 41.667 19.04 1.41 42.50 3.91
476 478 5.464057 CAGATGCATCAGAGTCTTTGAGATC 59.536 44.000 27.81 0.00 0.00 2.75
479 481 3.556775 GCATCAGAGTCTTTGAGATCAGC 59.443 47.826 0.00 0.00 0.00 4.26
503 505 2.232239 GCACACGCAACTACTCAATG 57.768 50.000 0.00 0.00 38.36 2.82
527 529 3.383505 TCTTGTGGAGTACATATGGACCG 59.616 47.826 14.76 0.00 39.48 4.79
533 535 4.202212 TGGAGTACATATGGACCGACAATG 60.202 45.833 14.76 0.00 0.00 2.82
552 554 1.079612 GCAACCAAGGAGCCAATGC 60.080 57.895 0.00 0.00 37.95 3.56
576 578 6.923508 GCTTGAGTTTGGCACTTAAAGTAAAT 59.076 34.615 0.00 0.00 35.01 1.40
609 611 6.406692 ACACTATCTATGCTTCGTACCAAT 57.593 37.500 0.00 0.00 0.00 3.16
641 643 5.657826 TTACATGCAACATTGGCTTGTAT 57.342 34.783 12.03 1.44 45.39 2.29
672 674 3.314553 GCATGTATTTGCATGGATCTGC 58.685 45.455 10.08 0.09 44.58 4.26
685 687 1.212616 GATCTGCGAGTCCGGATTTG 58.787 55.000 7.81 9.01 35.08 2.32
691 693 2.429250 TGCGAGTCCGGATTTGAGATAA 59.571 45.455 18.01 0.00 36.06 1.75
695 697 4.202020 CGAGTCCGGATTTGAGATAAGTGA 60.202 45.833 7.81 0.00 0.00 3.41
722 724 2.928116 GGAACGGAAATACGAGGTTCTG 59.072 50.000 0.00 0.00 37.66 3.02
724 726 3.672767 ACGGAAATACGAGGTTCTGTT 57.327 42.857 0.00 0.00 39.76 3.16
725 727 3.582780 ACGGAAATACGAGGTTCTGTTC 58.417 45.455 0.00 0.00 39.76 3.18
727 729 3.671433 CGGAAATACGAGGTTCTGTTCGA 60.671 47.826 0.51 0.00 39.93 3.71
732 734 0.721718 CGAGGTTCTGTTCGAATGCC 59.278 55.000 0.00 0.00 39.06 4.40
733 735 1.087501 GAGGTTCTGTTCGAATGCCC 58.912 55.000 0.00 0.00 33.45 5.36
734 736 0.322546 AGGTTCTGTTCGAATGCCCC 60.323 55.000 0.00 0.00 33.45 5.80
735 737 0.322546 GGTTCTGTTCGAATGCCCCT 60.323 55.000 0.00 0.00 33.45 4.79
736 738 0.804989 GTTCTGTTCGAATGCCCCTG 59.195 55.000 0.00 0.00 33.45 4.45
737 739 0.960364 TTCTGTTCGAATGCCCCTGC 60.960 55.000 0.00 0.00 38.26 4.85
776 778 2.912624 GCGGACGTATAGGGGGTCG 61.913 68.421 0.00 0.00 0.00 4.79
783 785 1.607251 CGTATAGGGGGTCGGATTTGC 60.607 57.143 0.00 0.00 0.00 3.68
790 792 1.644786 GGGTCGGATTTGCCAAGTCG 61.645 60.000 0.00 0.00 35.94 4.18
793 795 1.376683 CGGATTTGCCAAGTCGGGA 60.377 57.895 0.35 0.00 35.94 5.14
794 796 1.644786 CGGATTTGCCAAGTCGGGAC 61.645 60.000 0.35 0.00 32.85 4.46
822 825 1.205064 CCTGAACAGAAACGCAGCG 59.795 57.895 14.82 14.82 0.00 5.18
922 957 1.113517 GGACTCCCGGCTGCATACTA 61.114 60.000 0.50 0.00 0.00 1.82
925 960 0.315568 CTCCCGGCTGCATACTACTC 59.684 60.000 0.50 0.00 0.00 2.59
926 961 1.113517 TCCCGGCTGCATACTACTCC 61.114 60.000 0.50 0.00 0.00 3.85
927 962 1.007271 CCGGCTGCATACTACTCCG 60.007 63.158 0.50 0.00 36.90 4.63
928 963 1.452953 CCGGCTGCATACTACTCCGA 61.453 60.000 0.50 0.00 39.23 4.55
929 964 0.317938 CGGCTGCATACTACTCCGAC 60.318 60.000 0.50 0.00 39.23 4.79
930 965 1.033574 GGCTGCATACTACTCCGACT 58.966 55.000 0.50 0.00 0.00 4.18
931 966 1.001158 GGCTGCATACTACTCCGACTC 60.001 57.143 0.50 0.00 0.00 3.36
932 967 1.950909 GCTGCATACTACTCCGACTCT 59.049 52.381 0.00 0.00 0.00 3.24
933 968 2.287308 GCTGCATACTACTCCGACTCTG 60.287 54.545 0.00 0.00 0.00 3.35
934 969 1.676529 TGCATACTACTCCGACTCTGC 59.323 52.381 0.00 0.00 0.00 4.26
935 970 1.950909 GCATACTACTCCGACTCTGCT 59.049 52.381 0.00 0.00 0.00 4.24
936 971 2.031508 GCATACTACTCCGACTCTGCTC 60.032 54.545 0.00 0.00 0.00 4.26
937 972 3.472652 CATACTACTCCGACTCTGCTCT 58.527 50.000 0.00 0.00 0.00 4.09
938 973 2.032680 ACTACTCCGACTCTGCTCTC 57.967 55.000 0.00 0.00 0.00 3.20
939 974 1.279558 ACTACTCCGACTCTGCTCTCA 59.720 52.381 0.00 0.00 0.00 3.27
940 975 1.668751 CTACTCCGACTCTGCTCTCAC 59.331 57.143 0.00 0.00 0.00 3.51
941 976 0.037590 ACTCCGACTCTGCTCTCACT 59.962 55.000 0.00 0.00 0.00 3.41
942 977 0.732571 CTCCGACTCTGCTCTCACTC 59.267 60.000 0.00 0.00 0.00 3.51
943 978 0.326595 TCCGACTCTGCTCTCACTCT 59.673 55.000 0.00 0.00 0.00 3.24
944 979 0.732571 CCGACTCTGCTCTCACTCTC 59.267 60.000 0.00 0.00 0.00 3.20
945 980 1.447945 CGACTCTGCTCTCACTCTCA 58.552 55.000 0.00 0.00 0.00 3.27
946 981 1.398041 CGACTCTGCTCTCACTCTCAG 59.602 57.143 0.00 0.00 0.00 3.35
947 982 2.436417 GACTCTGCTCTCACTCTCAGT 58.564 52.381 0.00 0.00 0.00 3.41
949 984 2.161855 CTCTGCTCTCACTCTCAGTGT 58.838 52.381 3.64 0.00 46.03 3.55
950 985 2.557924 CTCTGCTCTCACTCTCAGTGTT 59.442 50.000 3.64 0.00 46.03 3.32
951 986 2.556189 TCTGCTCTCACTCTCAGTGTTC 59.444 50.000 3.64 0.00 46.03 3.18
952 987 2.557924 CTGCTCTCACTCTCAGTGTTCT 59.442 50.000 3.64 0.00 46.03 3.01
953 988 2.295629 TGCTCTCACTCTCAGTGTTCTG 59.704 50.000 3.64 0.00 46.03 3.02
954 989 2.926159 GCTCTCACTCTCAGTGTTCTGC 60.926 54.545 3.64 1.98 46.03 4.26
955 990 2.557924 CTCTCACTCTCAGTGTTCTGCT 59.442 50.000 3.64 0.00 46.03 4.24
956 991 2.556189 TCTCACTCTCAGTGTTCTGCTC 59.444 50.000 3.64 0.00 46.03 4.26
957 992 1.615883 TCACTCTCAGTGTTCTGCTCC 59.384 52.381 3.64 0.00 46.03 4.70
958 993 1.342496 CACTCTCAGTGTTCTGCTCCA 59.658 52.381 0.00 0.00 41.19 3.86
959 994 1.342819 ACTCTCAGTGTTCTGCTCCAC 59.657 52.381 0.00 0.00 41.10 4.02
960 995 0.681733 TCTCAGTGTTCTGCTCCACC 59.318 55.000 0.00 0.00 41.10 4.61
961 996 0.668706 CTCAGTGTTCTGCTCCACCG 60.669 60.000 0.00 0.00 41.10 4.94
962 997 1.112916 TCAGTGTTCTGCTCCACCGA 61.113 55.000 0.00 0.00 41.10 4.69
963 998 0.946221 CAGTGTTCTGCTCCACCGAC 60.946 60.000 0.00 0.00 34.79 4.79
964 999 1.668151 GTGTTCTGCTCCACCGACC 60.668 63.158 0.00 0.00 0.00 4.79
965 1000 2.047179 GTTCTGCTCCACCGACCC 60.047 66.667 0.00 0.00 0.00 4.46
966 1001 3.691342 TTCTGCTCCACCGACCCG 61.691 66.667 0.00 0.00 0.00 5.28
971 1006 4.436998 CTCCACCGACCCGCAGAC 62.437 72.222 0.00 0.00 0.00 3.51
989 1024 4.749310 CGCAGCCACCGCTTCTCT 62.749 66.667 0.00 0.00 45.55 3.10
990 1025 2.579201 GCAGCCACCGCTTCTCTA 59.421 61.111 0.00 0.00 45.55 2.43
991 1026 1.811679 GCAGCCACCGCTTCTCTAC 60.812 63.158 0.00 0.00 45.55 2.59
992 1027 1.893786 CAGCCACCGCTTCTCTACT 59.106 57.895 0.00 0.00 45.55 2.57
993 1028 0.459237 CAGCCACCGCTTCTCTACTG 60.459 60.000 0.00 0.00 45.55 2.74
994 1029 1.153549 GCCACCGCTTCTCTACTGG 60.154 63.158 0.00 0.00 0.00 4.00
995 1030 1.605058 GCCACCGCTTCTCTACTGGA 61.605 60.000 0.00 0.00 0.00 3.86
996 1031 1.115467 CCACCGCTTCTCTACTGGAT 58.885 55.000 0.00 0.00 0.00 3.41
997 1032 1.067821 CCACCGCTTCTCTACTGGATC 59.932 57.143 0.00 0.00 0.00 3.36
998 1033 2.028130 CACCGCTTCTCTACTGGATCT 58.972 52.381 0.00 0.00 0.00 2.75
999 1034 2.028130 ACCGCTTCTCTACTGGATCTG 58.972 52.381 0.00 0.00 0.00 2.90
1000 1035 2.302260 CCGCTTCTCTACTGGATCTGA 58.698 52.381 0.00 0.00 0.00 3.27
1001 1036 2.890311 CCGCTTCTCTACTGGATCTGAT 59.110 50.000 0.00 0.00 0.00 2.90
1002 1037 3.305267 CCGCTTCTCTACTGGATCTGATG 60.305 52.174 0.00 0.00 0.00 3.07
1003 1038 3.305267 CGCTTCTCTACTGGATCTGATGG 60.305 52.174 0.00 0.00 0.00 3.51
1004 1039 3.894427 GCTTCTCTACTGGATCTGATGGA 59.106 47.826 0.00 0.00 0.00 3.41
1005 1040 4.343526 GCTTCTCTACTGGATCTGATGGAA 59.656 45.833 0.00 0.00 0.00 3.53
1006 1041 5.509501 GCTTCTCTACTGGATCTGATGGAAG 60.510 48.000 0.00 0.00 0.00 3.46
1007 1042 5.394562 TCTCTACTGGATCTGATGGAAGA 57.605 43.478 0.00 0.00 0.00 2.87
1008 1043 5.770919 TCTCTACTGGATCTGATGGAAGAA 58.229 41.667 0.00 0.00 0.00 2.52
1009 1044 6.197903 TCTCTACTGGATCTGATGGAAGAAA 58.802 40.000 0.00 0.00 0.00 2.52
1010 1045 6.097554 TCTCTACTGGATCTGATGGAAGAAAC 59.902 42.308 0.00 0.00 0.00 2.78
1011 1046 3.866651 ACTGGATCTGATGGAAGAAACG 58.133 45.455 0.00 0.00 0.00 3.60
1012 1047 3.261897 ACTGGATCTGATGGAAGAAACGT 59.738 43.478 0.00 0.00 0.00 3.99
1013 1048 3.861840 TGGATCTGATGGAAGAAACGTC 58.138 45.455 0.00 0.00 0.00 4.34
1014 1049 2.860735 GGATCTGATGGAAGAAACGTCG 59.139 50.000 0.00 0.00 0.00 5.12
1015 1050 1.710013 TCTGATGGAAGAAACGTCGC 58.290 50.000 0.00 0.00 0.00 5.19
1016 1051 1.272490 TCTGATGGAAGAAACGTCGCT 59.728 47.619 0.00 0.00 0.00 4.93
1017 1052 1.391485 CTGATGGAAGAAACGTCGCTG 59.609 52.381 0.00 0.00 0.00 5.18
1018 1053 0.721718 GATGGAAGAAACGTCGCTGG 59.278 55.000 0.00 0.00 0.00 4.85
1019 1054 0.320374 ATGGAAGAAACGTCGCTGGA 59.680 50.000 0.00 0.00 0.00 3.86
1020 1055 0.319555 TGGAAGAAACGTCGCTGGAG 60.320 55.000 0.00 0.00 0.00 3.86
1021 1056 1.014564 GGAAGAAACGTCGCTGGAGG 61.015 60.000 0.00 0.00 0.00 4.30
1022 1057 1.627550 GAAGAAACGTCGCTGGAGGC 61.628 60.000 0.00 0.00 37.64 4.70
1023 1058 3.119096 GAAACGTCGCTGGAGGCC 61.119 66.667 0.00 0.00 37.74 5.19
1041 1076 3.443045 GCGATTGGGTGGCTGGTG 61.443 66.667 0.00 0.00 0.00 4.17
1042 1077 3.443045 CGATTGGGTGGCTGGTGC 61.443 66.667 0.00 0.00 38.76 5.01
1043 1078 2.283101 GATTGGGTGGCTGGTGCA 60.283 61.111 0.00 0.00 41.91 4.57
1044 1079 2.283388 ATTGGGTGGCTGGTGCAG 60.283 61.111 0.00 0.00 41.91 4.41
1045 1080 3.892104 ATTGGGTGGCTGGTGCAGG 62.892 63.158 0.00 0.00 41.91 4.85
1052 1087 2.591753 GCTGGTGCAGGCCATCTA 59.408 61.111 5.01 0.00 37.96 1.98
1053 1088 1.150081 GCTGGTGCAGGCCATCTAT 59.850 57.895 5.01 0.00 37.96 1.98
1054 1089 1.170919 GCTGGTGCAGGCCATCTATG 61.171 60.000 5.01 0.00 37.96 2.23
1055 1090 1.152902 TGGTGCAGGCCATCTATGC 60.153 57.895 5.01 6.18 40.40 3.14
1062 1097 4.393693 GCCATCTATGCCAGCCTC 57.606 61.111 0.00 0.00 0.00 4.70
1063 1098 1.303155 GCCATCTATGCCAGCCTCC 60.303 63.158 0.00 0.00 0.00 4.30
1064 1099 1.776975 GCCATCTATGCCAGCCTCCT 61.777 60.000 0.00 0.00 0.00 3.69
1065 1100 1.649321 CCATCTATGCCAGCCTCCTA 58.351 55.000 0.00 0.00 0.00 2.94
1066 1101 1.554160 CCATCTATGCCAGCCTCCTAG 59.446 57.143 0.00 0.00 0.00 3.02
1067 1102 2.255406 CATCTATGCCAGCCTCCTAGT 58.745 52.381 0.00 0.00 0.00 2.57
1068 1103 2.478872 TCTATGCCAGCCTCCTAGTT 57.521 50.000 0.00 0.00 0.00 2.24
1069 1104 2.042464 TCTATGCCAGCCTCCTAGTTG 58.958 52.381 0.00 0.00 0.00 3.16
1070 1105 1.071385 CTATGCCAGCCTCCTAGTTGG 59.929 57.143 0.00 0.00 37.10 3.77
1076 1111 3.458163 CCTCCTAGTTGGCGGCGA 61.458 66.667 12.98 0.00 33.39 5.54
1077 1112 2.105128 CTCCTAGTTGGCGGCGAG 59.895 66.667 12.98 0.00 35.26 5.03
1095 1130 1.278038 GCTCGATGCTTGGATTCGC 59.722 57.895 0.00 0.00 38.95 4.70
1096 1131 1.937391 CTCGATGCTTGGATTCGCC 59.063 57.895 0.00 0.00 33.08 5.54
1097 1132 1.825285 CTCGATGCTTGGATTCGCCG 61.825 60.000 0.00 0.00 40.66 6.46
1098 1133 2.885676 CGATGCTTGGATTCGCCGG 61.886 63.158 0.00 0.00 40.66 6.13
1099 1134 2.516930 ATGCTTGGATTCGCCGGG 60.517 61.111 2.18 0.00 40.66 5.73
1102 1137 3.204827 CTTGGATTCGCCGGGCTG 61.205 66.667 18.34 10.86 40.66 4.85
1103 1138 4.794648 TTGGATTCGCCGGGCTGG 62.795 66.667 18.34 8.39 40.66 4.85
1117 1152 4.147449 CTGGGCTCGCGGATGACA 62.147 66.667 6.13 0.00 0.00 3.58
1118 1153 3.451556 CTGGGCTCGCGGATGACAT 62.452 63.158 6.13 0.00 0.00 3.06
1119 1154 2.663188 GGGCTCGCGGATGACATC 60.663 66.667 6.13 6.91 0.00 3.06
1120 1155 3.032609 GGCTCGCGGATGACATCG 61.033 66.667 6.13 6.20 0.00 3.84
1192 1266 3.467226 GGAGGGCGATCGGGAACA 61.467 66.667 18.30 0.00 0.00 3.18
1245 1319 4.271816 CTGCTCTACGGCGCGGAT 62.272 66.667 22.76 8.49 34.47 4.18
1264 1338 1.064946 GATCTGGTGGACGAGCTCG 59.935 63.158 33.45 33.45 46.33 5.03
1325 1399 0.271927 AAGCCCCCTAGATCCATCCA 59.728 55.000 0.00 0.00 0.00 3.41
1326 1400 0.271927 AGCCCCCTAGATCCATCCAA 59.728 55.000 0.00 0.00 0.00 3.53
1327 1401 0.695347 GCCCCCTAGATCCATCCAAG 59.305 60.000 0.00 0.00 0.00 3.61
1330 1404 2.785857 CCCCCTAGATCCATCCAAGTTT 59.214 50.000 0.00 0.00 0.00 2.66
1354 1428 5.514274 TTTTTGCCTCTTCTTTCGAATGT 57.486 34.783 10.48 0.00 0.00 2.71
1355 1429 4.488126 TTTGCCTCTTCTTTCGAATGTG 57.512 40.909 10.48 5.90 0.00 3.21
1356 1430 3.126001 TGCCTCTTCTTTCGAATGTGT 57.874 42.857 10.48 0.00 0.00 3.72
1357 1431 4.265904 TGCCTCTTCTTTCGAATGTGTA 57.734 40.909 10.48 0.00 0.00 2.90
1359 1433 4.631377 TGCCTCTTCTTTCGAATGTGTATG 59.369 41.667 10.48 1.09 0.00 2.39
1360 1434 4.631813 GCCTCTTCTTTCGAATGTGTATGT 59.368 41.667 10.48 0.00 0.00 2.29
1361 1435 5.122396 GCCTCTTCTTTCGAATGTGTATGTT 59.878 40.000 10.48 0.00 0.00 2.71
1363 1437 6.368791 CCTCTTCTTTCGAATGTGTATGTTCA 59.631 38.462 10.48 0.00 0.00 3.18
1364 1438 7.095229 CCTCTTCTTTCGAATGTGTATGTTCAA 60.095 37.037 10.48 0.00 0.00 2.69
1366 1440 8.783093 TCTTCTTTCGAATGTGTATGTTCAAAT 58.217 29.630 10.48 0.00 0.00 2.32
1397 1636 7.824289 TCTTTCATTCATACGAGGAAATCAAGT 59.176 33.333 0.00 0.00 30.57 3.16
1399 1638 9.613428 TTTCATTCATACGAGGAAATCAAGTAT 57.387 29.630 0.00 0.00 0.00 2.12
1401 1640 9.914131 TCATTCATACGAGGAAATCAAGTATAG 57.086 33.333 0.00 0.00 0.00 1.31
1404 1643 9.745880 TTCATACGAGGAAATCAAGTATAGAAC 57.254 33.333 0.00 0.00 0.00 3.01
1428 1667 6.989169 ACATATGGACAAATAGCTCAAGAGTC 59.011 38.462 7.80 0.00 0.00 3.36
1435 1674 8.730680 GGACAAATAGCTCAAGAGTCAAATTTA 58.269 33.333 0.00 0.00 0.00 1.40
1463 1734 4.634004 TCATATTTTCTTGTGGTACAGGCG 59.366 41.667 0.00 0.00 41.80 5.52
1487 1758 0.669318 GCACGACCTTGATGAACCGA 60.669 55.000 0.00 0.00 0.00 4.69
1508 1779 1.842052 TGCACATGGATCACTGCAAT 58.158 45.000 4.12 0.00 36.71 3.56
1513 1784 3.193903 CACATGGATCACTGCAATTGGAA 59.806 43.478 7.72 0.00 0.00 3.53
1524 1795 3.673902 TGCAATTGGAAAGATCGACTGA 58.326 40.909 7.72 0.00 0.00 3.41
1539 1810 2.226674 CGACTGAGAGTAGCAGTGTTGA 59.773 50.000 0.00 0.00 45.94 3.18
1541 1812 2.959030 ACTGAGAGTAGCAGTGTTGACA 59.041 45.455 0.00 0.00 44.39 3.58
1547 1818 5.960113 AGAGTAGCAGTGTTGACAGATTAG 58.040 41.667 0.00 0.00 0.00 1.73
1582 1853 3.243907 GGGGACACTTTGATATCGAGGAG 60.244 52.174 9.00 3.76 0.00 3.69
1585 1856 5.044558 GGACACTTTGATATCGAGGAGTTC 58.955 45.833 9.00 2.50 0.00 3.01
1586 1857 5.012328 ACACTTTGATATCGAGGAGTTCC 57.988 43.478 9.00 0.00 0.00 3.62
1587 1858 4.466370 ACACTTTGATATCGAGGAGTTCCA 59.534 41.667 9.00 0.00 38.89 3.53
1605 1876 1.117150 CATGAAAATGGAGGGCCTGG 58.883 55.000 12.95 0.00 34.31 4.45
1607 1878 2.362889 AAAATGGAGGGCCTGGCG 60.363 61.111 12.95 0.00 34.31 5.69
1608 1879 3.963124 AAAATGGAGGGCCTGGCGG 62.963 63.158 12.95 0.00 34.31 6.13
1627 1898 3.067106 CGGAGCAAGATGTAAACACTGT 58.933 45.455 0.00 0.00 0.00 3.55
1633 1904 2.413837 AGATGTAAACACTGTCGTGCC 58.586 47.619 0.00 0.00 45.10 5.01
1634 1905 2.139917 GATGTAAACACTGTCGTGCCA 58.860 47.619 0.00 0.00 45.10 4.92
1649 1920 1.007038 GCCATGGTTGTGTGCACAG 60.007 57.895 22.40 6.96 42.94 3.66
1694 1965 4.256140 CGCAAGCATCTCAAGAGTAAAG 57.744 45.455 0.00 0.00 0.00 1.85
1723 1994 0.387929 AGAAACGTGGAGCGAGTGAA 59.612 50.000 0.00 0.00 44.77 3.18
1774 2045 4.669206 TCATTGGTTGTCAGCACATTTT 57.331 36.364 0.00 0.00 30.55 1.82
1912 2186 3.840078 TCATCCACCAGAAACATGAGAGA 59.160 43.478 0.00 0.00 0.00 3.10
1914 2188 2.568956 TCCACCAGAAACATGAGAGAGG 59.431 50.000 0.00 0.00 0.00 3.69
1967 2241 2.747177 TCCGAGACATACACTTGGGAT 58.253 47.619 0.00 0.00 38.91 3.85
2069 2343 3.954904 TGATACTTGGGTCAGACTCTAGC 59.045 47.826 11.45 0.00 0.00 3.42
2148 2437 4.079154 AGGGAAAAGTTTATGGGAGGGATC 60.079 45.833 0.00 0.00 0.00 3.36
2181 2470 5.392595 GCAGAAATCATACGGCTGGTAAAAA 60.393 40.000 0.00 0.00 34.09 1.94
2837 3130 2.954318 CGAAGATTGGAAATCCCTGCAT 59.046 45.455 0.00 0.00 35.38 3.96
3487 3831 1.001020 ATGCTCATGTTTGGCCGGA 60.001 52.632 5.05 0.00 0.00 5.14
4119 4463 9.826574 CATTGAGATTGGATGGAAAAATATTGT 57.173 29.630 0.00 0.00 0.00 2.71
4448 4792 5.869888 CCCTCAGTTTACACAGTTACAGATC 59.130 44.000 0.00 0.00 0.00 2.75
4717 5088 3.159213 TGATGTCCAGGCAAACAGAAT 57.841 42.857 0.00 0.00 0.00 2.40
4805 5176 3.776969 TCTGCTTCATGGGTAATCTCACT 59.223 43.478 0.00 0.00 0.00 3.41
5126 5497 1.959282 CCTGGCTTGCCTCCATATTTC 59.041 52.381 13.18 0.00 32.37 2.17
5497 6006 4.188247 ACGATTGCAGTACTGAGCTAAA 57.812 40.909 27.08 11.58 0.00 1.85
5678 6188 9.113838 GTTCTACCATTGATCATGTTATCTTGT 57.886 33.333 0.00 0.00 0.00 3.16
6085 6598 8.197439 ACTGGTAATTTTTGCTCTATTATTGCC 58.803 33.333 0.00 0.00 0.00 4.52
6344 6857 0.678684 CACAGATGCATGTGGCCTCA 60.679 55.000 25.84 10.45 45.53 3.86
6363 7285 0.462789 AATGCCTTTATGCAGCTGGC 59.537 50.000 17.12 9.07 45.93 4.85
6400 7350 9.878599 TTCGTAGACTGAAAATTTTCTGAATTC 57.121 29.630 32.20 22.77 38.84 2.17
6401 7351 9.051679 TCGTAGACTGAAAATTTTCTGAATTCA 57.948 29.630 32.20 8.12 38.84 2.57
6402 7352 9.831737 CGTAGACTGAAAATTTTCTGAATTCAT 57.168 29.630 32.20 16.46 38.84 2.57
6523 7493 3.062042 ACCAGTATTCGTTTCGTCAACC 58.938 45.455 0.00 0.00 30.65 3.77
6538 7508 3.558006 CGTCAACCAACAGTTATGTCACA 59.442 43.478 0.00 0.00 39.29 3.58
6539 7509 4.318760 CGTCAACCAACAGTTATGTCACAG 60.319 45.833 0.00 0.00 39.29 3.66
6540 7510 4.574828 GTCAACCAACAGTTATGTCACAGT 59.425 41.667 0.00 0.00 39.29 3.55
6541 7511 5.065988 GTCAACCAACAGTTATGTCACAGTT 59.934 40.000 0.00 0.00 39.29 3.16
6542 7512 6.259167 GTCAACCAACAGTTATGTCACAGTTA 59.741 38.462 0.00 0.00 39.29 2.24
6543 7513 6.995686 TCAACCAACAGTTATGTCACAGTTAT 59.004 34.615 0.00 0.00 39.29 1.89
6544 7514 8.151596 TCAACCAACAGTTATGTCACAGTTATA 58.848 33.333 0.00 0.00 39.29 0.98
6545 7515 8.779303 CAACCAACAGTTATGTCACAGTTATAA 58.221 33.333 0.00 0.00 39.29 0.98
6546 7516 8.547967 ACCAACAGTTATGTCACAGTTATAAG 57.452 34.615 0.00 0.00 39.29 1.73
6547 7517 7.119262 ACCAACAGTTATGTCACAGTTATAAGC 59.881 37.037 0.00 0.00 39.29 3.09
6548 7518 7.334421 CCAACAGTTATGTCACAGTTATAAGCT 59.666 37.037 0.00 0.00 39.29 3.74
6549 7519 9.366216 CAACAGTTATGTCACAGTTATAAGCTA 57.634 33.333 0.00 0.00 39.29 3.32
6550 7520 9.587772 AACAGTTATGTCACAGTTATAAGCTAG 57.412 33.333 0.00 0.00 39.29 3.42
6551 7521 7.707035 ACAGTTATGTCACAGTTATAAGCTAGC 59.293 37.037 6.62 6.62 32.99 3.42
6552 7522 7.923344 CAGTTATGTCACAGTTATAAGCTAGCT 59.077 37.037 12.68 12.68 0.00 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 3.368248 CCCATATCTGCCCCATATTTGG 58.632 50.000 0.00 0.00 43.23 3.28
8 9 2.315763 CCCCCATATCTGCCCCATATTT 59.684 50.000 0.00 0.00 0.00 1.40
9 10 1.932338 CCCCCATATCTGCCCCATATT 59.068 52.381 0.00 0.00 0.00 1.28
10 11 1.203740 ACCCCCATATCTGCCCCATAT 60.204 52.381 0.00 0.00 0.00 1.78
11 12 0.198437 ACCCCCATATCTGCCCCATA 59.802 55.000 0.00 0.00 0.00 2.74
13 14 2.084300 CACCCCCATATCTGCCCCA 61.084 63.158 0.00 0.00 0.00 4.96
14 15 2.846532 CACCCCCATATCTGCCCC 59.153 66.667 0.00 0.00 0.00 5.80
15 16 2.116125 GCACCCCCATATCTGCCC 59.884 66.667 0.00 0.00 0.00 5.36
16 17 2.116125 GGCACCCCCATATCTGCC 59.884 66.667 0.00 0.00 42.41 4.85
46 47 3.576356 CGACGTGATGGGCATGCC 61.576 66.667 29.47 29.47 36.99 4.40
47 48 3.576356 CCGACGTGATGGGCATGC 61.576 66.667 9.90 9.90 36.99 4.06
48 49 2.173669 GTCCGACGTGATGGGCATG 61.174 63.158 0.00 0.00 39.48 4.06
49 50 2.186903 GTCCGACGTGATGGGCAT 59.813 61.111 0.00 0.00 0.00 4.40
50 51 4.077184 GGTCCGACGTGATGGGCA 62.077 66.667 0.00 0.00 0.00 5.36
51 52 4.832608 GGGTCCGACGTGATGGGC 62.833 72.222 0.00 0.00 0.00 5.36
52 53 4.508128 CGGGTCCGACGTGATGGG 62.508 72.222 2.83 0.00 42.83 4.00
53 54 3.445687 TCGGGTCCGACGTGATGG 61.446 66.667 8.14 0.00 44.01 3.51
74 75 4.733542 ATTTGGGGTGGCGTCGGG 62.734 66.667 0.00 0.00 0.00 5.14
75 76 2.675075 AATTTGGGGTGGCGTCGG 60.675 61.111 0.00 0.00 0.00 4.79
76 77 2.566010 CAATTTGGGGTGGCGTCG 59.434 61.111 0.00 0.00 0.00 5.12
77 78 2.261361 GCAATTTGGGGTGGCGTC 59.739 61.111 0.00 0.00 0.00 5.19
78 79 2.522923 TGCAATTTGGGGTGGCGT 60.523 55.556 0.00 0.00 0.00 5.68
79 80 2.048316 GTGCAATTTGGGGTGGCG 60.048 61.111 0.00 0.00 0.00 5.69
80 81 2.049627 TTGGTGCAATTTGGGGTGGC 62.050 55.000 0.00 0.00 0.00 5.01
81 82 0.471617 TTTGGTGCAATTTGGGGTGG 59.528 50.000 0.00 0.00 0.00 4.61
82 83 2.425539 GATTTGGTGCAATTTGGGGTG 58.574 47.619 0.00 0.00 0.00 4.61
83 84 1.350684 GGATTTGGTGCAATTTGGGGT 59.649 47.619 0.00 0.00 0.00 4.95
84 85 1.350351 TGGATTTGGTGCAATTTGGGG 59.650 47.619 0.00 0.00 0.00 4.96
85 86 2.425539 GTGGATTTGGTGCAATTTGGG 58.574 47.619 0.00 0.00 0.00 4.12
86 87 2.425539 GGTGGATTTGGTGCAATTTGG 58.574 47.619 0.00 0.00 0.00 3.28
87 88 2.425539 GGGTGGATTTGGTGCAATTTG 58.574 47.619 0.00 0.00 0.00 2.32
88 89 1.350684 GGGGTGGATTTGGTGCAATTT 59.649 47.619 0.00 0.00 0.00 1.82
89 90 0.983467 GGGGTGGATTTGGTGCAATT 59.017 50.000 0.00 0.00 0.00 2.32
90 91 1.257055 CGGGGTGGATTTGGTGCAAT 61.257 55.000 0.00 0.00 0.00 3.56
91 92 1.905843 CGGGGTGGATTTGGTGCAA 60.906 57.895 0.00 0.00 0.00 4.08
92 93 2.282816 CGGGGTGGATTTGGTGCA 60.283 61.111 0.00 0.00 0.00 4.57
93 94 1.595093 CTTCGGGGTGGATTTGGTGC 61.595 60.000 0.00 0.00 0.00 5.01
94 95 0.037590 TCTTCGGGGTGGATTTGGTG 59.962 55.000 0.00 0.00 0.00 4.17
95 96 0.037734 GTCTTCGGGGTGGATTTGGT 59.962 55.000 0.00 0.00 0.00 3.67
96 97 0.679960 GGTCTTCGGGGTGGATTTGG 60.680 60.000 0.00 0.00 0.00 3.28
97 98 0.037590 TGGTCTTCGGGGTGGATTTG 59.962 55.000 0.00 0.00 0.00 2.32
98 99 0.328258 CTGGTCTTCGGGGTGGATTT 59.672 55.000 0.00 0.00 0.00 2.17
99 100 1.991230 CTGGTCTTCGGGGTGGATT 59.009 57.895 0.00 0.00 0.00 3.01
100 101 2.670148 GCTGGTCTTCGGGGTGGAT 61.670 63.158 0.00 0.00 0.00 3.41
101 102 3.319198 GCTGGTCTTCGGGGTGGA 61.319 66.667 0.00 0.00 0.00 4.02
102 103 4.410400 GGCTGGTCTTCGGGGTGG 62.410 72.222 0.00 0.00 0.00 4.61
103 104 4.760047 CGGCTGGTCTTCGGGGTG 62.760 72.222 0.00 0.00 0.00 4.61
106 107 3.447025 GATCCGGCTGGTCTTCGGG 62.447 68.421 12.43 0.00 43.54 5.14
107 108 2.107141 GATCCGGCTGGTCTTCGG 59.893 66.667 12.43 0.00 44.59 4.30
108 109 2.032860 ATGGATCCGGCTGGTCTTCG 62.033 60.000 12.43 0.00 36.30 3.79
109 110 0.181350 AATGGATCCGGCTGGTCTTC 59.819 55.000 12.43 7.38 36.30 2.87
110 111 0.625849 AAATGGATCCGGCTGGTCTT 59.374 50.000 12.43 0.00 36.30 3.01
111 112 0.107017 CAAATGGATCCGGCTGGTCT 60.107 55.000 12.43 0.00 36.30 3.85
112 113 1.728490 GCAAATGGATCCGGCTGGTC 61.728 60.000 12.43 8.49 36.30 4.02
113 114 1.754234 GCAAATGGATCCGGCTGGT 60.754 57.895 12.43 0.00 36.30 4.00
114 115 0.179020 TAGCAAATGGATCCGGCTGG 60.179 55.000 22.73 4.71 36.10 4.85
115 116 1.808945 GATAGCAAATGGATCCGGCTG 59.191 52.381 22.73 13.94 36.10 4.85
116 117 1.701847 AGATAGCAAATGGATCCGGCT 59.298 47.619 19.57 19.57 38.55 5.52
117 118 2.079925 GAGATAGCAAATGGATCCGGC 58.920 52.381 7.39 8.28 0.00 6.13
118 119 2.304180 AGGAGATAGCAAATGGATCCGG 59.696 50.000 7.39 0.00 0.00 5.14
119 120 3.260380 AGAGGAGATAGCAAATGGATCCG 59.740 47.826 7.39 0.00 0.00 4.18
120 121 4.531732 AGAGAGGAGATAGCAAATGGATCC 59.468 45.833 4.20 4.20 0.00 3.36
121 122 5.743636 AGAGAGGAGATAGCAAATGGATC 57.256 43.478 0.00 0.00 0.00 3.36
122 123 5.845614 AGAAGAGAGGAGATAGCAAATGGAT 59.154 40.000 0.00 0.00 0.00 3.41
123 124 5.215069 AGAAGAGAGGAGATAGCAAATGGA 58.785 41.667 0.00 0.00 0.00 3.41
124 125 5.549742 AGAAGAGAGGAGATAGCAAATGG 57.450 43.478 0.00 0.00 0.00 3.16
125 126 5.990996 GGAAGAAGAGAGGAGATAGCAAATG 59.009 44.000 0.00 0.00 0.00 2.32
126 127 5.904750 AGGAAGAAGAGAGGAGATAGCAAAT 59.095 40.000 0.00 0.00 0.00 2.32
127 128 5.276440 AGGAAGAAGAGAGGAGATAGCAAA 58.724 41.667 0.00 0.00 0.00 3.68
128 129 4.877773 AGGAAGAAGAGAGGAGATAGCAA 58.122 43.478 0.00 0.00 0.00 3.91
129 130 4.469657 GAGGAAGAAGAGAGGAGATAGCA 58.530 47.826 0.00 0.00 0.00 3.49
130 131 3.826729 GGAGGAAGAAGAGAGGAGATAGC 59.173 52.174 0.00 0.00 0.00 2.97
131 132 5.316987 GAGGAGGAAGAAGAGAGGAGATAG 58.683 50.000 0.00 0.00 0.00 2.08
132 133 4.105697 GGAGGAGGAAGAAGAGAGGAGATA 59.894 50.000 0.00 0.00 0.00 1.98
133 134 3.117131 GGAGGAGGAAGAAGAGAGGAGAT 60.117 52.174 0.00 0.00 0.00 2.75
134 135 2.243736 GGAGGAGGAAGAAGAGAGGAGA 59.756 54.545 0.00 0.00 0.00 3.71
135 136 2.666317 GGAGGAGGAAGAAGAGAGGAG 58.334 57.143 0.00 0.00 0.00 3.69
136 137 1.064314 CGGAGGAGGAAGAAGAGAGGA 60.064 57.143 0.00 0.00 0.00 3.71
137 138 1.398692 CGGAGGAGGAAGAAGAGAGG 58.601 60.000 0.00 0.00 0.00 3.69
138 139 0.744281 GCGGAGGAGGAAGAAGAGAG 59.256 60.000 0.00 0.00 0.00 3.20
139 140 1.032657 CGCGGAGGAGGAAGAAGAGA 61.033 60.000 0.00 0.00 0.00 3.10
140 141 1.435515 CGCGGAGGAGGAAGAAGAG 59.564 63.158 0.00 0.00 0.00 2.85
141 142 2.711922 GCGCGGAGGAGGAAGAAGA 61.712 63.158 8.83 0.00 0.00 2.87
142 143 2.202810 GCGCGGAGGAGGAAGAAG 60.203 66.667 8.83 0.00 0.00 2.85
143 144 3.771160 GGCGCGGAGGAGGAAGAA 61.771 66.667 8.83 0.00 0.00 2.52
152 153 4.838486 GAGACAGACGGCGCGGAG 62.838 72.222 22.76 12.79 0.00 4.63
159 160 4.838486 GGAGCGCGAGACAGACGG 62.838 72.222 12.10 0.00 0.00 4.79
198 199 2.317149 GACGGAGAGCCTGGGAATGG 62.317 65.000 0.00 0.00 0.00 3.16
199 200 1.144936 GACGGAGAGCCTGGGAATG 59.855 63.158 0.00 0.00 0.00 2.67
200 201 2.427245 CGACGGAGAGCCTGGGAAT 61.427 63.158 0.00 0.00 0.00 3.01
201 202 3.068691 CGACGGAGAGCCTGGGAA 61.069 66.667 0.00 0.00 0.00 3.97
204 205 2.829003 TAGCGACGGAGAGCCTGG 60.829 66.667 0.00 0.00 35.66 4.45
205 206 2.718731 CTAGCGACGGAGAGCCTG 59.281 66.667 0.00 0.00 35.66 4.85
206 207 3.213402 GCTAGCGACGGAGAGCCT 61.213 66.667 0.00 0.00 35.66 4.58
207 208 3.213402 AGCTAGCGACGGAGAGCC 61.213 66.667 9.55 0.00 35.45 4.70
208 209 2.025441 CAGCTAGCGACGGAGAGC 59.975 66.667 9.55 0.00 35.07 4.09
209 210 2.025441 GCAGCTAGCGACGGAGAG 59.975 66.667 9.55 0.00 0.00 3.20
218 219 2.587473 GGCTCTTCCGCAGCTAGC 60.587 66.667 6.62 6.62 37.05 3.42
219 220 2.107953 GGGCTCTTCCGCAGCTAG 59.892 66.667 0.00 0.00 37.05 3.42
220 221 2.364317 AGGGCTCTTCCGCAGCTA 60.364 61.111 0.00 0.00 37.05 3.32
221 222 3.780173 GAGGGCTCTTCCGCAGCT 61.780 66.667 0.00 0.00 37.05 4.24
222 223 4.847444 GGAGGGCTCTTCCGCAGC 62.847 72.222 0.00 0.00 36.02 5.25
223 224 4.168291 GGGAGGGCTCTTCCGCAG 62.168 72.222 0.00 0.00 34.94 5.18
224 225 4.722535 AGGGAGGGCTCTTCCGCA 62.723 66.667 4.85 0.00 43.71 5.69
225 226 3.393149 GAAGGGAGGGCTCTTCCGC 62.393 68.421 4.85 0.00 44.32 5.54
226 227 2.904131 GAAGGGAGGGCTCTTCCG 59.096 66.667 4.85 0.00 44.32 4.30
229 230 1.687493 CGAGGAAGGGAGGGCTCTT 60.687 63.158 0.00 0.00 37.60 2.85
230 231 2.042435 CGAGGAAGGGAGGGCTCT 60.042 66.667 0.00 0.00 0.00 4.09
231 232 3.855853 GCGAGGAAGGGAGGGCTC 61.856 72.222 0.00 0.00 0.00 4.70
273 274 3.305177 ATGTACCACGGTGGCGTCC 62.305 63.158 26.62 12.24 42.67 4.79
274 275 1.808390 GATGTACCACGGTGGCGTC 60.808 63.158 26.62 17.27 42.67 5.19
275 276 2.263540 GATGTACCACGGTGGCGT 59.736 61.111 26.62 12.79 42.67 5.68
276 277 2.510691 GGATGTACCACGGTGGCG 60.511 66.667 26.62 4.93 42.67 5.69
277 278 2.510691 CGGATGTACCACGGTGGC 60.511 66.667 26.62 12.18 42.67 5.01
278 279 2.185867 CCGGATGTACCACGGTGG 59.814 66.667 25.21 25.21 45.02 4.61
282 283 1.079405 AGTTGCCGGATGTACCACG 60.079 57.895 5.05 0.00 38.90 4.94
283 284 0.249398 AGAGTTGCCGGATGTACCAC 59.751 55.000 5.05 0.00 38.90 4.16
284 285 0.535335 GAGAGTTGCCGGATGTACCA 59.465 55.000 5.05 0.00 38.90 3.25
285 286 0.824759 AGAGAGTTGCCGGATGTACC 59.175 55.000 5.05 0.00 0.00 3.34
286 287 1.471676 CCAGAGAGTTGCCGGATGTAC 60.472 57.143 5.05 0.00 0.00 2.90
287 288 0.824109 CCAGAGAGTTGCCGGATGTA 59.176 55.000 5.05 0.00 0.00 2.29
288 289 1.599047 CCAGAGAGTTGCCGGATGT 59.401 57.895 5.05 0.00 0.00 3.06
289 290 1.817099 GCCAGAGAGTTGCCGGATG 60.817 63.158 5.05 0.00 0.00 3.51
290 291 1.965754 GAGCCAGAGAGTTGCCGGAT 61.966 60.000 5.05 0.00 0.00 4.18
291 292 2.604686 AGCCAGAGAGTTGCCGGA 60.605 61.111 5.05 0.00 0.00 5.14
292 293 2.125350 GAGCCAGAGAGTTGCCGG 60.125 66.667 0.00 0.00 0.00 6.13
293 294 2.125350 GGAGCCAGAGAGTTGCCG 60.125 66.667 0.00 0.00 0.00 5.69
294 295 2.125350 CGGAGCCAGAGAGTTGCC 60.125 66.667 0.00 0.00 0.00 4.52
357 358 3.889196 TCGTTTTCCCTCACAAAATCG 57.111 42.857 0.00 0.00 0.00 3.34
361 362 3.216187 TCCATCGTTTTCCCTCACAAA 57.784 42.857 0.00 0.00 0.00 2.83
366 367 3.873910 TCAGAATCCATCGTTTTCCCTC 58.126 45.455 0.00 0.00 0.00 4.30
375 376 2.474359 GACGAAGCATCAGAATCCATCG 59.526 50.000 0.00 0.00 35.36 3.84
380 381 2.209838 TCCGACGAAGCATCAGAATC 57.790 50.000 0.00 0.00 0.00 2.52
403 404 3.287867 TGATCTTCTGGATTTCTGGCC 57.712 47.619 0.00 0.00 34.33 5.36
430 432 3.688673 GCAGAAAGTTCATTAGCTGAGCT 59.311 43.478 13.25 13.25 46.25 4.09
458 460 3.797796 CGCTGATCTCAAAGACTCTGATG 59.202 47.826 0.00 0.00 0.00 3.07
461 463 2.538437 CCGCTGATCTCAAAGACTCTG 58.462 52.381 0.00 0.00 0.00 3.35
465 467 1.363744 CACCCGCTGATCTCAAAGAC 58.636 55.000 0.00 0.00 0.00 3.01
490 492 4.937620 TCCACAAGATCATTGAGTAGTTGC 59.062 41.667 10.61 0.00 0.00 4.17
503 505 5.542779 GGTCCATATGTACTCCACAAGATC 58.457 45.833 1.24 0.00 41.55 2.75
527 529 0.244721 GCTCCTTGGTTGCCATTGTC 59.755 55.000 0.00 0.00 31.53 3.18
533 535 1.593265 CATTGGCTCCTTGGTTGCC 59.407 57.895 15.35 15.35 46.26 4.52
552 554 8.871686 AATTTACTTTAAGTGCCAAACTCAAG 57.128 30.769 8.00 0.00 38.56 3.02
609 611 9.743057 GCCAATGTTGCATGTAAATAGTAAATA 57.257 29.630 0.00 0.00 0.00 1.40
614 616 5.920193 AGCCAATGTTGCATGTAAATAGT 57.080 34.783 0.00 0.00 0.00 2.12
615 617 6.101332 ACAAGCCAATGTTGCATGTAAATAG 58.899 36.000 0.00 0.00 38.72 1.73
626 628 4.591202 GTCGATCATACAAGCCAATGTTG 58.409 43.478 0.00 0.00 34.75 3.33
628 630 2.866156 CGTCGATCATACAAGCCAATGT 59.134 45.455 0.00 0.00 37.32 2.71
641 643 2.030335 GCAAATACATGCACGTCGATCA 59.970 45.455 0.00 0.00 45.70 2.92
671 673 2.795175 TATCTCAAATCCGGACTCGC 57.205 50.000 6.12 0.00 34.56 5.03
672 674 4.045104 CACTTATCTCAAATCCGGACTCG 58.955 47.826 6.12 0.00 0.00 4.18
685 687 2.540101 CGTTCCGGCATTCACTTATCTC 59.460 50.000 0.00 0.00 0.00 2.75
706 708 3.841643 TCGAACAGAACCTCGTATTTCC 58.158 45.455 0.00 0.00 36.46 3.13
718 720 0.960364 GCAGGGGCATTCGAACAGAA 60.960 55.000 0.00 0.00 43.93 3.02
733 735 4.007644 TCCGAGCACACCTGCAGG 62.008 66.667 31.60 31.60 46.97 4.85
734 736 2.740055 GTCCGAGCACACCTGCAG 60.740 66.667 6.78 6.78 46.97 4.41
735 737 4.662961 CGTCCGAGCACACCTGCA 62.663 66.667 0.00 0.00 46.97 4.41
754 756 2.641559 CCCTATACGTCCGCGGAC 59.358 66.667 41.75 41.75 43.45 4.79
755 757 2.595463 CCCCTATACGTCCGCGGA 60.595 66.667 27.28 27.28 43.45 5.54
756 758 3.677648 CCCCCTATACGTCCGCGG 61.678 72.222 22.12 22.12 43.45 6.46
776 778 0.322546 AGTCCCGACTTGGCAAATCC 60.323 55.000 2.74 0.00 38.83 3.01
783 785 3.318557 GGTTAGATCTAGTCCCGACTTGG 59.681 52.174 2.08 0.00 42.54 3.61
790 792 5.202004 TCTGTTCAGGTTAGATCTAGTCCC 58.798 45.833 17.11 12.31 0.00 4.46
793 795 6.622549 CGTTTCTGTTCAGGTTAGATCTAGT 58.377 40.000 2.02 0.00 0.00 2.57
794 796 5.517054 GCGTTTCTGTTCAGGTTAGATCTAG 59.483 44.000 2.02 0.00 0.00 2.43
822 825 1.244019 AAAGTCTTGGGCCGTCATGC 61.244 55.000 0.00 0.00 0.00 4.06
902 905 2.041922 TATGCAGCCGGGAGTCCT 60.042 61.111 9.58 0.00 0.00 3.85
922 957 0.037590 AGTGAGAGCAGAGTCGGAGT 59.962 55.000 0.00 0.00 0.00 3.85
925 960 0.732571 GAGAGTGAGAGCAGAGTCGG 59.267 60.000 0.00 0.00 0.00 4.79
926 961 1.398041 CTGAGAGTGAGAGCAGAGTCG 59.602 57.143 0.00 0.00 0.00 4.18
927 962 2.436417 ACTGAGAGTGAGAGCAGAGTC 58.564 52.381 0.00 0.00 32.86 3.36
928 963 2.584835 ACTGAGAGTGAGAGCAGAGT 57.415 50.000 0.00 0.00 32.86 3.24
939 974 1.342819 GTGGAGCAGAACACTGAGAGT 59.657 52.381 0.00 0.00 34.84 3.24
940 975 1.337635 GGTGGAGCAGAACACTGAGAG 60.338 57.143 0.00 0.00 37.72 3.20
941 976 0.681733 GGTGGAGCAGAACACTGAGA 59.318 55.000 0.00 0.00 37.72 3.27
942 977 0.668706 CGGTGGAGCAGAACACTGAG 60.669 60.000 0.00 0.00 44.70 3.35
943 978 1.367471 CGGTGGAGCAGAACACTGA 59.633 57.895 0.00 0.00 44.70 3.41
944 979 0.946221 GTCGGTGGAGCAGAACACTG 60.946 60.000 0.00 0.00 43.59 3.66
945 980 1.367840 GTCGGTGGAGCAGAACACT 59.632 57.895 0.00 0.00 37.72 3.55
946 981 1.668151 GGTCGGTGGAGCAGAACAC 60.668 63.158 0.00 0.00 40.40 3.32
947 982 2.741092 GGTCGGTGGAGCAGAACA 59.259 61.111 0.00 0.00 40.40 3.18
948 983 2.047179 GGGTCGGTGGAGCAGAAC 60.047 66.667 0.00 0.00 42.46 3.01
949 984 3.691342 CGGGTCGGTGGAGCAGAA 61.691 66.667 0.00 0.00 42.46 3.02
954 989 4.436998 GTCTGCGGGTCGGTGGAG 62.437 72.222 0.00 0.00 0.00 3.86
976 1011 1.153549 CCAGTAGAGAAGCGGTGGC 60.154 63.158 0.00 0.00 40.37 5.01
977 1012 1.067821 GATCCAGTAGAGAAGCGGTGG 59.932 57.143 0.00 0.00 0.00 4.61
978 1013 2.028130 AGATCCAGTAGAGAAGCGGTG 58.972 52.381 0.00 0.00 0.00 4.94
979 1014 2.028130 CAGATCCAGTAGAGAAGCGGT 58.972 52.381 0.00 0.00 0.00 5.68
980 1015 2.302260 TCAGATCCAGTAGAGAAGCGG 58.698 52.381 0.00 0.00 0.00 5.52
981 1016 3.305267 CCATCAGATCCAGTAGAGAAGCG 60.305 52.174 0.00 0.00 0.00 4.68
982 1017 3.894427 TCCATCAGATCCAGTAGAGAAGC 59.106 47.826 0.00 0.00 0.00 3.86
983 1018 5.832595 TCTTCCATCAGATCCAGTAGAGAAG 59.167 44.000 0.00 0.00 0.00 2.85
984 1019 5.770919 TCTTCCATCAGATCCAGTAGAGAA 58.229 41.667 0.00 0.00 0.00 2.87
985 1020 5.394562 TCTTCCATCAGATCCAGTAGAGA 57.605 43.478 0.00 0.00 0.00 3.10
986 1021 6.279882 GTTTCTTCCATCAGATCCAGTAGAG 58.720 44.000 0.00 0.00 0.00 2.43
987 1022 5.163509 CGTTTCTTCCATCAGATCCAGTAGA 60.164 44.000 0.00 0.00 0.00 2.59
988 1023 5.046529 CGTTTCTTCCATCAGATCCAGTAG 58.953 45.833 0.00 0.00 0.00 2.57
989 1024 4.466370 ACGTTTCTTCCATCAGATCCAGTA 59.534 41.667 0.00 0.00 0.00 2.74
990 1025 3.261897 ACGTTTCTTCCATCAGATCCAGT 59.738 43.478 0.00 0.00 0.00 4.00
991 1026 3.866651 ACGTTTCTTCCATCAGATCCAG 58.133 45.455 0.00 0.00 0.00 3.86
992 1027 3.676049 CGACGTTTCTTCCATCAGATCCA 60.676 47.826 0.00 0.00 0.00 3.41
993 1028 2.860735 CGACGTTTCTTCCATCAGATCC 59.139 50.000 0.00 0.00 0.00 3.36
994 1029 2.282820 GCGACGTTTCTTCCATCAGATC 59.717 50.000 0.00 0.00 0.00 2.75
995 1030 2.093973 AGCGACGTTTCTTCCATCAGAT 60.094 45.455 0.00 0.00 0.00 2.90
996 1031 1.272490 AGCGACGTTTCTTCCATCAGA 59.728 47.619 0.00 0.00 0.00 3.27
997 1032 1.391485 CAGCGACGTTTCTTCCATCAG 59.609 52.381 0.00 0.00 0.00 2.90
998 1033 1.428448 CAGCGACGTTTCTTCCATCA 58.572 50.000 0.00 0.00 0.00 3.07
999 1034 0.721718 CCAGCGACGTTTCTTCCATC 59.278 55.000 0.00 0.00 0.00 3.51
1000 1035 0.320374 TCCAGCGACGTTTCTTCCAT 59.680 50.000 0.00 0.00 0.00 3.41
1001 1036 0.319555 CTCCAGCGACGTTTCTTCCA 60.320 55.000 0.00 0.00 0.00 3.53
1002 1037 1.014564 CCTCCAGCGACGTTTCTTCC 61.015 60.000 0.00 0.00 0.00 3.46
1003 1038 1.627550 GCCTCCAGCGACGTTTCTTC 61.628 60.000 0.00 0.00 0.00 2.87
1004 1039 1.668151 GCCTCCAGCGACGTTTCTT 60.668 57.895 0.00 0.00 0.00 2.52
1005 1040 2.048127 GCCTCCAGCGACGTTTCT 60.048 61.111 0.00 0.00 0.00 2.52
1006 1041 3.119096 GGCCTCCAGCGACGTTTC 61.119 66.667 0.00 0.00 45.17 2.78
1024 1059 3.443045 CACCAGCCACCCAATCGC 61.443 66.667 0.00 0.00 0.00 4.58
1025 1060 3.443045 GCACCAGCCACCCAATCG 61.443 66.667 0.00 0.00 33.58 3.34
1026 1061 2.283101 TGCACCAGCCACCCAATC 60.283 61.111 0.00 0.00 41.13 2.67
1027 1062 2.283388 CTGCACCAGCCACCCAAT 60.283 61.111 0.00 0.00 41.13 3.16
1028 1063 4.601794 CCTGCACCAGCCACCCAA 62.602 66.667 0.00 0.00 41.13 4.12
1033 1068 4.746309 GATGGCCTGCACCAGCCA 62.746 66.667 19.60 19.60 44.71 4.75
1035 1070 1.150081 ATAGATGGCCTGCACCAGC 59.850 57.895 3.32 3.49 46.71 4.85
1036 1071 1.170919 GCATAGATGGCCTGCACCAG 61.171 60.000 3.32 0.00 44.71 4.00
1037 1072 1.152902 GCATAGATGGCCTGCACCA 60.153 57.895 3.32 0.00 45.82 4.17
1038 1073 3.755434 GCATAGATGGCCTGCACC 58.245 61.111 3.32 0.00 35.96 5.01
1046 1081 1.554160 CTAGGAGGCTGGCATAGATGG 59.446 57.143 3.38 0.00 0.00 3.51
1047 1082 2.255406 ACTAGGAGGCTGGCATAGATG 58.745 52.381 3.38 0.00 0.00 2.90
1048 1083 2.636893 CAACTAGGAGGCTGGCATAGAT 59.363 50.000 3.38 0.00 0.00 1.98
1049 1084 2.042464 CAACTAGGAGGCTGGCATAGA 58.958 52.381 3.38 0.00 0.00 1.98
1050 1085 1.071385 CCAACTAGGAGGCTGGCATAG 59.929 57.143 3.38 5.40 41.22 2.23
1051 1086 1.131638 CCAACTAGGAGGCTGGCATA 58.868 55.000 3.38 0.00 41.22 3.14
1052 1087 1.918253 CCAACTAGGAGGCTGGCAT 59.082 57.895 3.38 0.00 41.22 4.40
1053 1088 3.403624 CCAACTAGGAGGCTGGCA 58.596 61.111 3.38 0.00 41.22 4.92
1060 1095 2.105128 CTCGCCGCCAACTAGGAG 59.895 66.667 0.00 0.00 41.22 3.69
1061 1096 4.143333 GCTCGCCGCCAACTAGGA 62.143 66.667 0.00 0.00 41.22 2.94
1062 1097 4.148825 AGCTCGCCGCCAACTAGG 62.149 66.667 0.00 0.00 40.39 3.02
1063 1098 2.583593 GAGCTCGCCGCCAACTAG 60.584 66.667 0.00 0.00 40.39 2.57
1064 1099 4.492160 CGAGCTCGCCGCCAACTA 62.492 66.667 25.07 0.00 40.39 2.24
1077 1112 1.278038 GCGAATCCAAGCATCGAGC 59.722 57.895 0.00 0.00 46.19 5.03
1078 1113 1.825285 CGGCGAATCCAAGCATCGAG 61.825 60.000 0.00 0.00 38.82 4.04
1079 1114 1.882625 CGGCGAATCCAAGCATCGA 60.883 57.895 0.00 0.00 38.82 3.59
1080 1115 2.628106 CGGCGAATCCAAGCATCG 59.372 61.111 0.00 0.00 39.47 3.84
1081 1116 2.546494 CCCGGCGAATCCAAGCATC 61.546 63.158 9.30 0.00 34.54 3.91
1082 1117 2.516930 CCCGGCGAATCCAAGCAT 60.517 61.111 9.30 0.00 34.54 3.79
1085 1120 3.204827 CAGCCCGGCGAATCCAAG 61.205 66.667 9.30 0.00 34.01 3.61
1086 1121 4.794648 CCAGCCCGGCGAATCCAA 62.795 66.667 9.30 0.00 34.01 3.53
1100 1135 3.451556 ATGTCATCCGCGAGCCCAG 62.452 63.158 8.23 0.00 0.00 4.45
1101 1136 3.445518 GATGTCATCCGCGAGCCCA 62.446 63.158 8.23 0.00 0.00 5.36
1102 1137 2.663188 GATGTCATCCGCGAGCCC 60.663 66.667 8.23 0.00 0.00 5.19
1103 1138 3.032609 CGATGTCATCCGCGAGCC 61.033 66.667 8.23 0.00 0.00 4.70
1104 1139 2.013483 CTCGATGTCATCCGCGAGC 61.013 63.158 8.23 0.00 42.82 5.03
1105 1140 4.218597 CTCGATGTCATCCGCGAG 57.781 61.111 8.23 7.52 43.25 5.03
1106 1141 1.649267 CTCTCGATGTCATCCGCGA 59.351 57.895 8.23 1.41 0.00 5.87
1107 1142 1.371022 CCTCTCGATGTCATCCGCG 60.371 63.158 7.25 0.00 0.00 6.46
1108 1143 1.663074 GCCTCTCGATGTCATCCGC 60.663 63.158 7.25 0.00 0.00 5.54
1109 1144 0.039617 GAGCCTCTCGATGTCATCCG 60.040 60.000 7.25 3.20 0.00 4.18
1110 1145 1.000385 CTGAGCCTCTCGATGTCATCC 60.000 57.143 7.25 0.00 32.35 3.51
1111 1146 1.952990 TCTGAGCCTCTCGATGTCATC 59.047 52.381 2.43 2.43 32.35 2.92
1112 1147 2.064434 TCTGAGCCTCTCGATGTCAT 57.936 50.000 0.00 0.00 32.35 3.06
1113 1148 1.952990 GATCTGAGCCTCTCGATGTCA 59.047 52.381 2.52 0.00 32.35 3.58
1114 1149 2.030893 CAGATCTGAGCCTCTCGATGTC 60.031 54.545 18.34 0.00 32.35 3.06
1115 1150 1.955778 CAGATCTGAGCCTCTCGATGT 59.044 52.381 18.34 0.00 32.35 3.06
1116 1151 2.228925 TCAGATCTGAGCCTCTCGATG 58.771 52.381 21.67 0.00 34.14 3.84
1117 1152 2.655090 TCAGATCTGAGCCTCTCGAT 57.345 50.000 21.67 0.00 34.14 3.59
1140 1214 1.729470 CCACCATCTCGACTCCCTCG 61.729 65.000 0.00 0.00 44.44 4.63
1158 1232 1.194781 TCCCCTTGACAGCAGAGACC 61.195 60.000 0.00 0.00 0.00 3.85
1206 1280 4.957684 CTGATGCGGGCGAGCGAT 62.958 66.667 0.00 0.00 40.67 4.58
1245 1319 1.657751 CGAGCTCGTCCACCAGATCA 61.658 60.000 27.79 0.00 34.11 2.92
1294 1368 1.915983 GGGGCTTACCTCCTTCCAG 59.084 63.158 0.00 0.00 40.03 3.86
1368 1442 9.177608 TGATTTCCTCGTATGAATGAAAGATTT 57.822 29.630 12.35 0.53 32.01 2.17
1370 1444 8.737168 TTGATTTCCTCGTATGAATGAAAGAT 57.263 30.769 12.35 1.30 32.01 2.40
1371 1445 7.824289 ACTTGATTTCCTCGTATGAATGAAAGA 59.176 33.333 12.35 3.12 32.01 2.52
1372 1446 7.978982 ACTTGATTTCCTCGTATGAATGAAAG 58.021 34.615 12.35 4.65 32.01 2.62
1375 1449 9.914131 CTATACTTGATTTCCTCGTATGAATGA 57.086 33.333 0.00 0.00 0.00 2.57
1378 1452 9.745880 GTTCTATACTTGATTTCCTCGTATGAA 57.254 33.333 0.00 0.00 0.00 2.57
1379 1453 8.909923 TGTTCTATACTTGATTTCCTCGTATGA 58.090 33.333 0.00 0.00 0.00 2.15
1380 1454 9.698309 ATGTTCTATACTTGATTTCCTCGTATG 57.302 33.333 0.00 0.00 0.00 2.39
1383 1457 9.698309 CATATGTTCTATACTTGATTTCCTCGT 57.302 33.333 0.00 0.00 0.00 4.18
1384 1458 9.144747 CCATATGTTCTATACTTGATTTCCTCG 57.855 37.037 1.24 0.00 0.00 4.63
1387 1461 9.778741 TGTCCATATGTTCTATACTTGATTTCC 57.221 33.333 1.24 0.00 0.00 3.13
1399 1638 8.704668 TCTTGAGCTATTTGTCCATATGTTCTA 58.295 33.333 1.24 0.00 0.00 2.10
1401 1640 7.497249 ACTCTTGAGCTATTTGTCCATATGTTC 59.503 37.037 1.24 0.00 0.00 3.18
1404 1643 6.988580 TGACTCTTGAGCTATTTGTCCATATG 59.011 38.462 0.00 0.00 0.00 1.78
1416 1655 9.283768 TGAAACATAAATTTGACTCTTGAGCTA 57.716 29.630 0.00 0.00 0.00 3.32
1435 1674 8.522830 CCTGTACCACAAGAAAATATGAAACAT 58.477 33.333 0.00 0.00 0.00 2.71
1440 1711 4.634004 CGCCTGTACCACAAGAAAATATGA 59.366 41.667 0.00 0.00 0.00 2.15
1452 1723 3.431725 GCCTTGCGCCTGTACCAC 61.432 66.667 4.18 0.00 0.00 4.16
1456 1727 3.997397 TCGTGCCTTGCGCCTGTA 61.997 61.111 4.18 0.00 35.42 2.74
1471 1742 1.062587 GCATTCGGTTCATCAAGGTCG 59.937 52.381 0.00 0.00 0.00 4.79
1480 1751 2.016318 GATCCATGTGCATTCGGTTCA 58.984 47.619 0.00 0.00 0.00 3.18
1484 1755 1.332686 CAGTGATCCATGTGCATTCGG 59.667 52.381 0.00 0.00 0.00 4.30
1487 1758 1.842052 TGCAGTGATCCATGTGCATT 58.158 45.000 2.55 0.00 40.93 3.56
1508 1779 4.142359 GCTACTCTCAGTCGATCTTTCCAA 60.142 45.833 0.00 0.00 0.00 3.53
1513 1784 3.376859 CACTGCTACTCTCAGTCGATCTT 59.623 47.826 0.00 0.00 42.38 2.40
1524 1795 4.881019 AATCTGTCAACACTGCTACTCT 57.119 40.909 0.00 0.00 0.00 3.24
1539 1810 1.288335 AGGACTCGGACCCTAATCTGT 59.712 52.381 0.00 0.00 0.00 3.41
1541 1812 1.411787 CCAGGACTCGGACCCTAATCT 60.412 57.143 0.00 0.00 0.00 2.40
1547 1818 4.393778 TCCCCAGGACTCGGACCC 62.394 72.222 0.00 0.00 0.00 4.46
1586 1857 1.117150 CCAGGCCCTCCATTTTCATG 58.883 55.000 0.00 0.00 33.74 3.07
1587 1858 0.688749 GCCAGGCCCTCCATTTTCAT 60.689 55.000 0.00 0.00 33.74 2.57
1605 1876 2.076863 AGTGTTTACATCTTGCTCCGC 58.923 47.619 0.00 0.00 0.00 5.54
1607 1878 3.123621 CGACAGTGTTTACATCTTGCTCC 59.876 47.826 0.00 0.00 0.00 4.70
1608 1879 3.741344 ACGACAGTGTTTACATCTTGCTC 59.259 43.478 0.00 0.00 0.00 4.26
1627 1898 2.551006 GCACACAACCATGGCACGA 61.551 57.895 13.04 0.00 0.00 4.35
1633 1904 0.318360 CAGCTGTGCACACAACCATG 60.318 55.000 17.42 5.45 41.33 3.66
1634 1905 0.466007 TCAGCTGTGCACACAACCAT 60.466 50.000 17.42 0.00 41.33 3.55
1649 1920 1.302832 CAGGTGTCCCCTTGTCAGC 60.303 63.158 0.00 0.00 42.73 4.26
1673 1944 3.063180 CCTTTACTCTTGAGATGCTTGCG 59.937 47.826 4.49 0.00 0.00 4.85
1694 1965 3.059120 GCTCCACGTTTCTTCTTACAACC 60.059 47.826 0.00 0.00 0.00 3.77
1744 2015 7.557358 TGTGCTGACAACCAATGAAGATATAAT 59.443 33.333 0.00 0.00 0.00 1.28
1757 2028 4.887071 ACTCTTAAAATGTGCTGACAACCA 59.113 37.500 0.00 0.00 35.11 3.67
1761 2032 6.203530 CAGAAGACTCTTAAAATGTGCTGACA 59.796 38.462 0.00 0.00 36.22 3.58
1912 2186 2.297129 GGCTCCTCAACCTCAGCCT 61.297 63.158 1.40 0.00 46.88 4.58
1914 2188 0.250901 TTTGGCTCCTCAACCTCAGC 60.251 55.000 0.00 0.00 0.00 4.26
1945 2219 3.905968 TCCCAAGTGTATGTCTCGGATA 58.094 45.455 0.00 0.00 0.00 2.59
1952 2226 5.353394 TGTCCTTATCCCAAGTGTATGTC 57.647 43.478 0.00 0.00 0.00 3.06
2069 2343 3.287312 ACATGGTGATTTGAACTTGCG 57.713 42.857 0.00 0.00 0.00 4.85
2148 2437 4.212847 CCGTATGATTTCTGCCTTCTCATG 59.787 45.833 0.00 0.00 0.00 3.07
2181 2470 8.314751 AGTTACACTGCTAGATAATTTGTGTCT 58.685 33.333 0.00 0.00 38.07 3.41
3550 3894 5.116882 GCTCAAGGGTAAACGAAGTATCAT 58.883 41.667 0.00 0.00 45.00 2.45
4448 4792 3.924918 TGACTGTTCTCTTCCTCTTCG 57.075 47.619 0.00 0.00 0.00 3.79
4873 5244 5.469760 TCACGAATTCTCAAATCTTCAAGCA 59.530 36.000 3.52 0.00 0.00 3.91
5126 5497 2.968156 TGCCCCGACAAACGTTCG 60.968 61.111 0.00 0.20 40.78 3.95
5497 6006 4.377021 TGTTAGCGATTCACACTGTTCTT 58.623 39.130 0.00 0.00 0.00 2.52
5678 6188 3.612423 CGACGCTGAGTTATGTCAATTCA 59.388 43.478 0.00 0.00 0.00 2.57
6085 6598 2.226437 ACTGCTTTTAGTTGGCATGACG 59.774 45.455 0.00 0.00 35.37 4.35
6278 6791 7.828717 TCATTAATCAGCTATTTCAGTCCACAA 59.171 33.333 0.00 0.00 0.00 3.33
6344 6857 0.462789 GCCAGCTGCATAAAGGCATT 59.537 50.000 8.66 0.00 43.97 3.56
6516 7481 3.558006 TGTGACATAACTGTTGGTTGACG 59.442 43.478 2.69 0.00 38.75 4.35
6523 7493 8.256611 AGCTTATAACTGTGACATAACTGTTG 57.743 34.615 2.69 0.00 40.89 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.