Multiple sequence alignment - TraesCS3D01G445900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G445900 chr3D 100.000 2819 0 0 1 2819 554795949 554798767 0.000000e+00 5206.0
1 TraesCS3D01G445900 chr3D 87.675 357 22 3 2485 2819 562752648 562752292 2.040000e-106 396.0
2 TraesCS3D01G445900 chr3D 86.944 360 23 10 2483 2819 479151052 479151410 1.580000e-102 383.0
3 TraesCS3D01G445900 chr3D 88.060 335 16 6 2486 2797 506211834 506212167 2.650000e-100 375.0
4 TraesCS3D01G445900 chr3D 72.697 1216 226 66 645 1792 554816834 554818011 2.730000e-80 309.0
5 TraesCS3D01G445900 chr3D 86.726 113 15 0 1713 1825 554946669 554946781 2.950000e-25 126.0
6 TraesCS3D01G445900 chr3B 93.216 1710 63 18 330 2033 738110403 738108741 0.000000e+00 2466.0
7 TraesCS3D01G445900 chr3B 77.209 996 170 36 652 1612 738126601 738125628 1.920000e-146 529.0
8 TraesCS3D01G445900 chr3B 73.892 1241 259 49 636 1826 737813523 737812298 1.200000e-118 436.0
9 TraesCS3D01G445900 chr3B 73.854 1243 256 53 636 1826 737783786 737782561 5.580000e-117 431.0
10 TraesCS3D01G445900 chr3B 73.927 1235 250 57 645 1826 737847427 737846212 5.580000e-117 431.0
11 TraesCS3D01G445900 chr3B 73.203 1127 233 50 726 1818 738156362 738155271 7.480000e-91 344.0
12 TraesCS3D01G445900 chr3B 89.370 254 25 2 6 257 143153031 143153284 4.530000e-83 318.0
13 TraesCS3D01G445900 chr3B 72.574 1247 238 66 648 1827 738106457 738105248 2.110000e-81 313.0
14 TraesCS3D01G445900 chr3B 72.266 1143 243 51 726 1822 742110247 742109133 1.280000e-73 287.0
15 TraesCS3D01G445900 chr3B 86.111 252 33 2 6 256 429581087 429580837 1.290000e-68 270.0
16 TraesCS3D01G445900 chr3B 72.025 1126 241 51 726 1822 738625706 738624626 1.660000e-67 267.0
17 TraesCS3D01G445900 chr3B 85.714 252 34 2 6 256 672957734 672957484 5.990000e-67 265.0
18 TraesCS3D01G445900 chr3B 94.304 158 7 2 2244 2399 738108478 738108321 1.010000e-59 241.0
19 TraesCS3D01G445900 chr3B 94.262 122 7 0 2034 2155 738108675 738108554 1.330000e-43 187.0
20 TraesCS3D01G445900 chr3B 80.272 147 29 0 1682 1828 737879416 737879270 8.250000e-21 111.0
21 TraesCS3D01G445900 chr3A 91.976 1159 59 10 875 2033 691837529 691836405 0.000000e+00 1594.0
22 TraesCS3D01G445900 chr3A 75.448 1173 229 37 687 1826 691954898 691953752 1.500000e-142 516.0
23 TraesCS3D01G445900 chr3A 74.920 1244 237 61 637 1826 691732966 691731744 1.510000e-137 499.0
24 TraesCS3D01G445900 chr3A 93.210 324 22 0 2162 2485 691835423 691835100 7.060000e-131 477.0
25 TraesCS3D01G445900 chr3A 85.376 465 19 19 462 910 691837961 691837530 1.200000e-118 436.0
26 TraesCS3D01G445900 chr3A 86.207 348 23 9 2473 2797 706038139 706037794 1.240000e-93 353.0
27 TraesCS3D01G445900 chr3A 72.711 1125 230 53 726 1822 692495233 692494158 3.530000e-79 305.0
28 TraesCS3D01G445900 chr3A 72.048 1245 250 62 648 1827 691770195 691768984 5.950000e-72 281.0
29 TraesCS3D01G445900 chr3A 71.303 1136 265 44 726 1826 692471723 692470614 4.690000e-58 235.0
30 TraesCS3D01G445900 chr3A 95.122 123 6 0 2034 2156 691836368 691836246 7.970000e-46 195.0
31 TraesCS3D01G445900 chr3A 89.865 148 13 1 306 453 691838089 691837944 3.710000e-44 189.0
32 TraesCS3D01G445900 chr3A 85.345 116 17 0 1713 1828 691735021 691734906 1.370000e-23 121.0
33 TraesCS3D01G445900 chrUn 74.815 1219 235 47 652 1826 45269326 45270516 4.220000e-133 484.0
34 TraesCS3D01G445900 chrUn 86.111 252 32 3 6 256 293081690 293081441 4.630000e-68 268.0
35 TraesCS3D01G445900 chr7D 74.472 1183 239 45 687 1840 160562688 160561540 1.190000e-123 453.0
36 TraesCS3D01G445900 chr7D 88.379 327 22 5 2486 2797 37069868 37069543 2.050000e-101 379.0
37 TraesCS3D01G445900 chr5D 89.076 357 16 10 2486 2819 548301113 548301469 3.360000e-114 422.0
38 TraesCS3D01G445900 chr5D 88.235 357 19 7 2486 2819 8061485 8061841 3.380000e-109 405.0
39 TraesCS3D01G445900 chr5D 86.571 350 22 7 2486 2811 537961327 537960979 2.060000e-96 363.0
40 TraesCS3D01G445900 chr5D 85.827 254 31 5 5 255 464702155 464701904 5.990000e-67 265.0
41 TraesCS3D01G445900 chr6D 88.398 362 15 15 2485 2819 310157759 310158120 7.270000e-111 411.0
42 TraesCS3D01G445900 chr6D 83.630 281 21 5 2560 2819 435591123 435591399 1.010000e-59 241.0
43 TraesCS3D01G445900 chr7B 73.607 1220 245 55 662 1840 121777891 121776708 5.660000e-107 398.0
44 TraesCS3D01G445900 chr7A 87.616 323 30 5 2486 2798 401061964 401062286 1.600000e-97 366.0
45 TraesCS3D01G445900 chr7A 88.538 253 27 2 6 257 425772655 425772906 3.530000e-79 305.0
46 TraesCS3D01G445900 chr7A 77.609 527 89 17 687 1194 161711804 161711288 2.750000e-75 292.0
47 TraesCS3D01G445900 chr7A 94.118 34 2 0 1002 1035 673416871 673416904 5.000000e-03 52.8
48 TraesCS3D01G445900 chr4B 86.905 336 20 7 2485 2797 522389662 522389328 3.450000e-94 355.0
49 TraesCS3D01G445900 chr2A 85.319 361 18 6 2486 2819 746870086 746869734 9.670000e-90 340.0
50 TraesCS3D01G445900 chr1D 88.800 250 22 6 2486 2731 463272512 463272759 4.560000e-78 302.0
51 TraesCS3D01G445900 chr1D 85.490 255 32 2 3 256 426643529 426643279 7.750000e-66 261.0
52 TraesCS3D01G445900 chr6B 86.561 253 32 2 5 256 679677435 679677686 7.690000e-71 278.0
53 TraesCS3D01G445900 chr6B 86.885 244 30 2 6 248 719751891 719751649 3.580000e-69 272.0
54 TraesCS3D01G445900 chr2D 87.843 255 6 5 2587 2819 148811949 148811698 2.770000e-70 276.0
55 TraesCS3D01G445900 chr1A 95.349 129 4 2 2693 2819 59921940 59921812 1.320000e-48 204.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G445900 chr3D 554795949 554798767 2818 False 5206.00 5206 100.0000 1 2819 1 chr3D.!!$F3 2818
1 TraesCS3D01G445900 chr3D 554816834 554818011 1177 False 309.00 309 72.6970 645 1792 1 chr3D.!!$F4 1147
2 TraesCS3D01G445900 chr3B 738105248 738110403 5155 True 801.75 2466 88.5890 330 2399 4 chr3B.!!$R11 2069
3 TraesCS3D01G445900 chr3B 738125628 738126601 973 True 529.00 529 77.2090 652 1612 1 chr3B.!!$R7 960
4 TraesCS3D01G445900 chr3B 737812298 737813523 1225 True 436.00 436 73.8920 636 1826 1 chr3B.!!$R4 1190
5 TraesCS3D01G445900 chr3B 737782561 737783786 1225 True 431.00 431 73.8540 636 1826 1 chr3B.!!$R3 1190
6 TraesCS3D01G445900 chr3B 737846212 737847427 1215 True 431.00 431 73.9270 645 1826 1 chr3B.!!$R5 1181
7 TraesCS3D01G445900 chr3B 738155271 738156362 1091 True 344.00 344 73.2030 726 1818 1 chr3B.!!$R8 1092
8 TraesCS3D01G445900 chr3B 742109133 742110247 1114 True 287.00 287 72.2660 726 1822 1 chr3B.!!$R10 1096
9 TraesCS3D01G445900 chr3B 738624626 738625706 1080 True 267.00 267 72.0250 726 1822 1 chr3B.!!$R9 1096
10 TraesCS3D01G445900 chr3A 691835100 691838089 2989 True 578.20 1594 91.1098 306 2485 5 chr3A.!!$R7 2179
11 TraesCS3D01G445900 chr3A 691953752 691954898 1146 True 516.00 516 75.4480 687 1826 1 chr3A.!!$R2 1139
12 TraesCS3D01G445900 chr3A 691731744 691735021 3277 True 310.00 499 80.1325 637 1828 2 chr3A.!!$R6 1191
13 TraesCS3D01G445900 chr3A 692494158 692495233 1075 True 305.00 305 72.7110 726 1822 1 chr3A.!!$R4 1096
14 TraesCS3D01G445900 chr3A 691768984 691770195 1211 True 281.00 281 72.0480 648 1827 1 chr3A.!!$R1 1179
15 TraesCS3D01G445900 chr3A 692470614 692471723 1109 True 235.00 235 71.3030 726 1826 1 chr3A.!!$R3 1100
16 TraesCS3D01G445900 chrUn 45269326 45270516 1190 False 484.00 484 74.8150 652 1826 1 chrUn.!!$F1 1174
17 TraesCS3D01G445900 chr7D 160561540 160562688 1148 True 453.00 453 74.4720 687 1840 1 chr7D.!!$R2 1153
18 TraesCS3D01G445900 chr7B 121776708 121777891 1183 True 398.00 398 73.6070 662 1840 1 chr7B.!!$R1 1178
19 TraesCS3D01G445900 chr7A 161711288 161711804 516 True 292.00 292 77.6090 687 1194 1 chr7A.!!$R1 507

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
458 459 0.036765 ACAGGCCTTATCGACGCAAA 60.037 50.0 0.0 0.0 0.0 3.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2168 4652 0.240145 TAGATAGCCGTCGCAATCCG 59.76 55.0 0.0 0.0 37.52 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.728474 GCTGATGGCCTCGTCATG 58.272 61.111 3.32 2.07 38.16 3.07
19 20 1.890979 GCTGATGGCCTCGTCATGG 60.891 63.158 3.32 0.00 38.16 3.66
20 21 1.825341 CTGATGGCCTCGTCATGGA 59.175 57.895 3.32 0.00 38.16 3.41
21 22 0.178767 CTGATGGCCTCGTCATGGAA 59.821 55.000 3.32 0.00 38.16 3.53
41 42 8.613922 ATGGAATGACCCAAAGAATCTTTATT 57.386 30.769 8.03 4.33 40.04 1.40
42 43 8.066612 TGGAATGACCCAAAGAATCTTTATTC 57.933 34.615 8.03 12.36 38.86 1.75
43 44 7.673504 TGGAATGACCCAAAGAATCTTTATTCA 59.326 33.333 20.60 16.80 39.97 2.57
44 45 8.531146 GGAATGACCCAAAGAATCTTTATTCAA 58.469 33.333 20.60 6.38 43.44 2.69
45 46 9.358872 GAATGACCCAAAGAATCTTTATTCAAC 57.641 33.333 16.94 11.00 43.44 3.18
46 47 7.831691 TGACCCAAAGAATCTTTATTCAACA 57.168 32.000 8.03 2.47 43.44 3.33
47 48 7.657336 TGACCCAAAGAATCTTTATTCAACAC 58.343 34.615 8.03 0.00 43.44 3.32
48 49 6.993079 ACCCAAAGAATCTTTATTCAACACC 58.007 36.000 8.03 0.00 43.44 4.16
50 51 6.294508 CCCAAAGAATCTTTATTCAACACCGT 60.295 38.462 8.03 0.00 43.44 4.83
52 53 7.359595 CAAAGAATCTTTATTCAACACCGTCA 58.640 34.615 8.03 0.00 43.44 4.35
53 54 7.687941 AAGAATCTTTATTCAACACCGTCAT 57.312 32.000 0.00 0.00 43.44 3.06
55 56 6.878923 AGAATCTTTATTCAACACCGTCATCA 59.121 34.615 1.35 0.00 43.44 3.07
56 57 6.668541 ATCTTTATTCAACACCGTCATCAG 57.331 37.500 0.00 0.00 0.00 2.90
57 58 4.391830 TCTTTATTCAACACCGTCATCAGC 59.608 41.667 0.00 0.00 0.00 4.26
58 59 1.078709 ATTCAACACCGTCATCAGCG 58.921 50.000 0.00 0.00 0.00 5.18
60 61 2.030412 AACACCGTCATCAGCGCA 59.970 55.556 11.47 0.00 0.00 6.09
61 62 2.317609 AACACCGTCATCAGCGCAC 61.318 57.895 11.47 0.00 0.00 5.34
62 63 3.490759 CACCGTCATCAGCGCACC 61.491 66.667 11.47 0.00 0.00 5.01
65 66 2.809174 CGTCATCAGCGCACCGAA 60.809 61.111 11.47 0.00 0.00 4.30
66 67 2.792290 CGTCATCAGCGCACCGAAG 61.792 63.158 11.47 0.00 0.00 3.79
67 68 2.815211 TCATCAGCGCACCGAAGC 60.815 61.111 11.47 0.00 0.00 3.86
68 69 2.816958 CATCAGCGCACCGAAGCT 60.817 61.111 11.47 0.00 45.74 3.74
69 70 1.519234 CATCAGCGCACCGAAGCTA 60.519 57.895 11.47 0.00 42.52 3.32
70 71 1.083806 CATCAGCGCACCGAAGCTAA 61.084 55.000 11.47 0.00 42.52 3.09
71 72 0.807667 ATCAGCGCACCGAAGCTAAG 60.808 55.000 11.47 0.00 42.52 2.18
72 73 1.446099 CAGCGCACCGAAGCTAAGA 60.446 57.895 11.47 0.00 42.52 2.10
73 74 1.446272 AGCGCACCGAAGCTAAGAC 60.446 57.895 11.47 0.00 42.60 3.01
74 75 2.789203 GCGCACCGAAGCTAAGACG 61.789 63.158 0.30 0.00 0.00 4.18
75 76 1.154093 CGCACCGAAGCTAAGACGA 60.154 57.895 0.00 0.00 0.00 4.20
76 77 0.525668 CGCACCGAAGCTAAGACGAT 60.526 55.000 0.00 0.00 0.00 3.73
77 78 0.924090 GCACCGAAGCTAAGACGATG 59.076 55.000 0.00 0.00 0.00 3.84
78 79 1.469251 GCACCGAAGCTAAGACGATGA 60.469 52.381 0.00 0.00 0.00 2.92
79 80 2.876091 CACCGAAGCTAAGACGATGAA 58.124 47.619 0.00 0.00 0.00 2.57
80 81 2.599082 CACCGAAGCTAAGACGATGAAC 59.401 50.000 0.00 0.00 0.00 3.18
81 82 2.230508 ACCGAAGCTAAGACGATGAACA 59.769 45.455 0.00 0.00 0.00 3.18
82 83 2.854777 CCGAAGCTAAGACGATGAACAG 59.145 50.000 0.00 0.00 0.00 3.16
83 84 3.502920 CGAAGCTAAGACGATGAACAGT 58.497 45.455 0.00 0.00 0.00 3.55
84 85 3.921021 CGAAGCTAAGACGATGAACAGTT 59.079 43.478 0.00 0.00 0.00 3.16
85 86 4.386049 CGAAGCTAAGACGATGAACAGTTT 59.614 41.667 0.00 0.00 0.00 2.66
86 87 5.571741 CGAAGCTAAGACGATGAACAGTTTA 59.428 40.000 0.00 0.00 0.00 2.01
87 88 6.089016 CGAAGCTAAGACGATGAACAGTTTAA 59.911 38.462 0.00 0.00 0.00 1.52
89 90 7.724305 AGCTAAGACGATGAACAGTTTAAAA 57.276 32.000 0.00 0.00 0.00 1.52
90 91 8.149973 AGCTAAGACGATGAACAGTTTAAAAA 57.850 30.769 0.00 0.00 0.00 1.94
91 92 8.068380 AGCTAAGACGATGAACAGTTTAAAAAC 58.932 33.333 0.00 0.00 39.17 2.43
92 93 7.322938 GCTAAGACGATGAACAGTTTAAAAACC 59.677 37.037 2.02 0.00 39.71 3.27
93 94 6.937436 AGACGATGAACAGTTTAAAAACCT 57.063 33.333 2.02 0.00 39.71 3.50
95 96 8.617290 AGACGATGAACAGTTTAAAAACCTAT 57.383 30.769 2.02 0.00 39.71 2.57
97 98 9.750882 GACGATGAACAGTTTAAAAACCTATAC 57.249 33.333 2.02 0.00 39.71 1.47
98 99 9.498176 ACGATGAACAGTTTAAAAACCTATACT 57.502 29.630 2.02 0.00 39.71 2.12
104 105 8.992835 ACAGTTTAAAAACCTATACTACGAGG 57.007 34.615 2.02 0.00 39.71 4.63
106 107 9.643693 CAGTTTAAAAACCTATACTACGAGGAA 57.356 33.333 2.02 0.00 39.71 3.36
107 108 9.866798 AGTTTAAAAACCTATACTACGAGGAAG 57.133 33.333 2.02 0.00 39.71 3.46
108 109 9.645059 GTTTAAAAACCTATACTACGAGGAAGT 57.355 33.333 0.00 0.00 36.61 3.01
115 116 9.813446 AACCTATACTACGAGGAAGTAAAAATG 57.187 33.333 0.00 0.00 36.61 2.32
116 117 9.193806 ACCTATACTACGAGGAAGTAAAAATGA 57.806 33.333 0.00 0.00 36.61 2.57
121 122 6.817140 ACTACGAGGAAGTAAAAATGATCCAC 59.183 38.462 0.00 0.00 32.47 4.02
123 124 5.411669 ACGAGGAAGTAAAAATGATCCACAC 59.588 40.000 0.00 0.00 32.47 3.82
124 125 5.445939 CGAGGAAGTAAAAATGATCCACACG 60.446 44.000 0.00 0.00 32.47 4.49
125 126 4.156008 AGGAAGTAAAAATGATCCACACGC 59.844 41.667 0.00 0.00 32.47 5.34
126 127 4.083003 GGAAGTAAAAATGATCCACACGCA 60.083 41.667 0.00 0.00 0.00 5.24
127 128 5.393027 GGAAGTAAAAATGATCCACACGCAT 60.393 40.000 0.00 0.00 0.00 4.73
129 130 2.945447 AAAATGATCCACACGCATGG 57.055 45.000 0.00 0.00 41.57 3.66
134 135 2.186644 TCCACACGCATGGATCCG 59.813 61.111 7.39 0.00 44.14 4.18
135 136 2.896854 CCACACGCATGGATCCGG 60.897 66.667 7.39 0.00 43.02 5.14
136 137 3.576356 CACACGCATGGATCCGGC 61.576 66.667 16.17 16.17 0.00 6.13
142 143 4.626081 CATGGATCCGGCGACCCC 62.626 72.222 9.30 6.46 0.00 4.95
161 162 3.359523 CTCACCACCGACGACCGA 61.360 66.667 0.00 0.00 41.76 4.69
162 163 3.324099 CTCACCACCGACGACCGAG 62.324 68.421 0.00 0.00 41.76 4.63
163 164 4.415332 CACCACCGACGACCGAGG 62.415 72.222 0.00 1.98 41.76 4.63
167 168 4.353437 ACCGACGACCGAGGTTGC 62.353 66.667 9.35 2.35 41.76 4.17
204 205 2.358247 GAGGACGCCGCTGGAAAA 60.358 61.111 0.00 0.00 0.00 2.29
205 206 1.745489 GAGGACGCCGCTGGAAAAT 60.745 57.895 0.00 0.00 0.00 1.82
206 207 1.303317 AGGACGCCGCTGGAAAATT 60.303 52.632 0.00 0.00 0.00 1.82
208 209 1.154035 GACGCCGCTGGAAAATTGG 60.154 57.895 0.00 0.00 0.00 3.16
209 210 2.506881 CGCCGCTGGAAAATTGGC 60.507 61.111 0.00 0.00 42.29 4.52
210 211 2.506881 GCCGCTGGAAAATTGGCG 60.507 61.111 0.00 0.00 45.97 5.69
211 212 2.961768 CCGCTGGAAAATTGGCGT 59.038 55.556 0.00 0.00 45.11 5.68
212 213 1.154035 CCGCTGGAAAATTGGCGTC 60.154 57.895 0.00 0.00 45.11 5.19
213 214 1.586154 CCGCTGGAAAATTGGCGTCT 61.586 55.000 0.00 0.00 45.11 4.18
214 215 0.179189 CGCTGGAAAATTGGCGTCTC 60.179 55.000 0.00 0.00 42.23 3.36
215 216 0.171231 GCTGGAAAATTGGCGTCTCC 59.829 55.000 0.00 0.00 0.00 3.71
216 217 1.826385 CTGGAAAATTGGCGTCTCCT 58.174 50.000 0.00 0.00 35.26 3.69
217 218 1.470098 CTGGAAAATTGGCGTCTCCTG 59.530 52.381 0.00 0.00 35.26 3.86
218 219 0.811281 GGAAAATTGGCGTCTCCTGG 59.189 55.000 0.00 0.00 35.26 4.45
219 220 0.171231 GAAAATTGGCGTCTCCTGGC 59.829 55.000 0.00 0.00 35.26 4.85
255 256 3.132139 CGCGAGGGACGAGAGGAA 61.132 66.667 0.00 0.00 44.01 3.36
256 257 2.490685 GCGAGGGACGAGAGGAAC 59.509 66.667 0.00 0.00 45.77 3.62
258 259 2.762234 CGAGGGACGAGAGGAACGG 61.762 68.421 0.00 0.00 45.77 4.44
259 260 3.066233 GAGGGACGAGAGGAACGGC 62.066 68.421 0.00 0.00 38.12 5.68
260 261 4.493747 GGGACGAGAGGAACGGCG 62.494 72.222 4.80 4.80 39.91 6.46
262 263 4.117661 GACGAGAGGAACGGCGCT 62.118 66.667 6.90 0.00 34.93 5.92
263 264 4.421479 ACGAGAGGAACGGCGCTG 62.421 66.667 16.39 16.39 34.93 5.18
265 266 4.443266 GAGAGGAACGGCGCTGCT 62.443 66.667 18.15 5.01 0.00 4.24
266 267 3.941657 GAGAGGAACGGCGCTGCTT 62.942 63.158 18.15 10.02 0.00 3.91
267 268 3.793144 GAGGAACGGCGCTGCTTG 61.793 66.667 18.15 0.00 0.00 4.01
269 270 4.389576 GGAACGGCGCTGCTTGTG 62.390 66.667 18.15 0.00 0.00 3.33
276 277 3.043713 CGCTGCTTGTGCTCGGAA 61.044 61.111 0.00 0.00 40.48 4.30
277 278 2.393768 CGCTGCTTGTGCTCGGAAT 61.394 57.895 0.00 0.00 40.48 3.01
278 279 1.427020 GCTGCTTGTGCTCGGAATC 59.573 57.895 0.00 0.00 40.48 2.52
279 280 1.986575 GCTGCTTGTGCTCGGAATCC 61.987 60.000 0.00 0.00 40.48 3.01
280 281 1.372087 CTGCTTGTGCTCGGAATCCC 61.372 60.000 0.00 0.00 40.48 3.85
294 295 1.066002 GAATCCCGGATTCACGTACGA 59.934 52.381 28.41 0.00 45.30 3.43
295 296 1.325355 ATCCCGGATTCACGTACGAT 58.675 50.000 24.41 4.72 0.00 3.73
296 297 0.664761 TCCCGGATTCACGTACGATC 59.335 55.000 24.41 14.28 0.00 3.69
297 298 0.666913 CCCGGATTCACGTACGATCT 59.333 55.000 24.41 3.04 0.00 2.75
298 299 1.334779 CCCGGATTCACGTACGATCTC 60.335 57.143 24.41 12.11 0.00 2.75
299 300 1.602851 CCGGATTCACGTACGATCTCT 59.397 52.381 24.41 1.88 0.00 3.10
301 302 3.363772 CCGGATTCACGTACGATCTCTAC 60.364 52.174 24.41 5.43 0.00 2.59
302 303 3.246936 CGGATTCACGTACGATCTCTACA 59.753 47.826 24.41 0.00 0.00 2.74
303 304 4.608667 CGGATTCACGTACGATCTCTACAG 60.609 50.000 24.41 4.15 0.00 2.74
304 305 4.272991 GGATTCACGTACGATCTCTACAGT 59.727 45.833 24.41 0.00 0.00 3.55
309 310 2.032722 CGTACGATCTCTACAGTGGCTC 60.033 54.545 10.44 0.00 0.00 4.70
415 416 0.959553 CGACTCATATACGGCCCAGT 59.040 55.000 0.00 0.00 0.00 4.00
416 417 1.340248 CGACTCATATACGGCCCAGTT 59.660 52.381 0.00 0.00 0.00 3.16
417 418 2.223971 CGACTCATATACGGCCCAGTTT 60.224 50.000 0.00 0.00 0.00 2.66
444 445 6.775594 AAAGATAAAACCCTTGATACAGGC 57.224 37.500 0.00 0.00 31.69 4.85
445 446 4.793201 AGATAAAACCCTTGATACAGGCC 58.207 43.478 0.00 0.00 31.69 5.19
446 447 4.478686 AGATAAAACCCTTGATACAGGCCT 59.521 41.667 0.00 0.00 31.69 5.19
447 448 3.542969 AAAACCCTTGATACAGGCCTT 57.457 42.857 0.00 0.00 31.69 4.35
448 449 4.668138 AAAACCCTTGATACAGGCCTTA 57.332 40.909 0.00 0.00 31.69 2.69
449 450 4.881157 AAACCCTTGATACAGGCCTTAT 57.119 40.909 0.00 4.71 31.69 1.73
450 451 4.439253 AACCCTTGATACAGGCCTTATC 57.561 45.455 19.82 19.82 31.69 1.75
451 452 2.368875 ACCCTTGATACAGGCCTTATCG 59.631 50.000 20.58 8.00 31.69 2.92
452 453 2.632996 CCCTTGATACAGGCCTTATCGA 59.367 50.000 20.58 18.91 31.69 3.59
453 454 3.555168 CCCTTGATACAGGCCTTATCGAC 60.555 52.174 20.58 7.22 31.69 4.20
454 455 3.309388 CTTGATACAGGCCTTATCGACG 58.691 50.000 20.58 6.49 0.00 5.12
455 456 1.000607 TGATACAGGCCTTATCGACGC 60.001 52.381 20.58 6.89 0.00 5.19
456 457 1.000607 GATACAGGCCTTATCGACGCA 60.001 52.381 0.00 0.00 0.00 5.24
457 458 0.818938 TACAGGCCTTATCGACGCAA 59.181 50.000 0.00 0.00 0.00 4.85
458 459 0.036765 ACAGGCCTTATCGACGCAAA 60.037 50.000 0.00 0.00 0.00 3.68
459 460 1.083489 CAGGCCTTATCGACGCAAAA 58.917 50.000 0.00 0.00 0.00 2.44
492 496 3.695060 CCTTATCGAGGCATACGACCTAT 59.305 47.826 0.00 0.00 42.37 2.57
499 503 1.550409 GGCATACGACCTATCCCTCCT 60.550 57.143 0.00 0.00 0.00 3.69
569 573 4.699522 GCCGCGGACAAGACCCTT 62.700 66.667 33.48 0.00 0.00 3.95
571 575 1.153628 CCGCGGACAAGACCCTTAG 60.154 63.158 24.07 0.00 0.00 2.18
572 576 1.810030 CGCGGACAAGACCCTTAGC 60.810 63.158 0.00 0.00 0.00 3.09
573 577 1.449778 GCGGACAAGACCCTTAGCC 60.450 63.158 0.00 0.00 0.00 3.93
574 578 1.153628 CGGACAAGACCCTTAGCCG 60.154 63.158 0.00 0.00 0.00 5.52
575 579 1.449778 GGACAAGACCCTTAGCCGC 60.450 63.158 0.00 0.00 0.00 6.53
576 580 1.449778 GACAAGACCCTTAGCCGCC 60.450 63.158 0.00 0.00 0.00 6.13
577 581 2.180159 GACAAGACCCTTAGCCGCCA 62.180 60.000 0.00 0.00 0.00 5.69
1198 2725 6.136071 CACTTCCATGTTTTTGAGTTCGTAG 58.864 40.000 0.00 0.00 0.00 3.51
1463 3032 4.702831 TGCGGTGCTTATGATATTTCTCA 58.297 39.130 0.00 0.00 0.00 3.27
1476 3045 0.322456 TTTCTCAATCACAGGGGCGG 60.322 55.000 0.00 0.00 0.00 6.13
1643 3221 2.093181 TCATACACCCGGAAGACAATGG 60.093 50.000 0.73 0.00 0.00 3.16
1821 3423 0.178767 TGGCAGATGCGCACTAGAAT 59.821 50.000 14.90 0.00 43.26 2.40
1900 3502 6.460664 AGTTGTAATTGTTTTTATTGGCGC 57.539 33.333 0.00 0.00 0.00 6.53
1901 3503 6.220201 AGTTGTAATTGTTTTTATTGGCGCT 58.780 32.000 7.64 0.00 0.00 5.92
1902 3504 6.704050 AGTTGTAATTGTTTTTATTGGCGCTT 59.296 30.769 7.64 0.00 0.00 4.68
1903 3505 6.459257 TGTAATTGTTTTTATTGGCGCTTG 57.541 33.333 7.64 0.00 0.00 4.01
1904 3506 6.216569 TGTAATTGTTTTTATTGGCGCTTGA 58.783 32.000 7.64 0.00 0.00 3.02
1905 3507 6.701841 TGTAATTGTTTTTATTGGCGCTTGAA 59.298 30.769 7.64 0.00 0.00 2.69
1906 3508 6.799926 AATTGTTTTTATTGGCGCTTGAAT 57.200 29.167 7.64 6.22 0.00 2.57
1907 3509 5.588568 TTGTTTTTATTGGCGCTTGAATG 57.411 34.783 7.64 0.00 0.00 2.67
1908 3510 3.431572 TGTTTTTATTGGCGCTTGAATGC 59.568 39.130 7.64 0.00 0.00 3.56
1913 3515 3.918544 GGCGCTTGAATGCCCTTA 58.081 55.556 7.64 0.00 45.73 2.69
1914 3516 2.419057 GGCGCTTGAATGCCCTTAT 58.581 52.632 7.64 0.00 45.73 1.73
1915 3517 0.746659 GGCGCTTGAATGCCCTTATT 59.253 50.000 7.64 0.00 45.73 1.40
1916 3518 1.136891 GGCGCTTGAATGCCCTTATTT 59.863 47.619 7.64 0.00 45.73 1.40
1917 3519 2.360801 GGCGCTTGAATGCCCTTATTTA 59.639 45.455 7.64 0.00 45.73 1.40
1918 3520 3.372060 GCGCTTGAATGCCCTTATTTAC 58.628 45.455 0.00 0.00 0.00 2.01
1919 3521 3.795488 GCGCTTGAATGCCCTTATTTACC 60.795 47.826 0.00 0.00 0.00 2.85
1948 3550 2.942306 GCCCTTATTTACCCTGAACGCA 60.942 50.000 0.00 0.00 0.00 5.24
2019 3621 1.407437 GCCCATGGTCTCAAGATTCGT 60.407 52.381 11.73 0.00 0.00 3.85
2139 3806 1.617947 GGGGAAGTCGGTCAGCATCT 61.618 60.000 0.00 0.00 0.00 2.90
2156 3823 6.378280 TCAGCATCTGTCACTCTTATCTAACA 59.622 38.462 0.00 0.00 32.61 2.41
2168 4652 0.394565 ATCTAACAGATCGCTGGGGC 59.605 55.000 0.00 0.00 46.60 5.80
2192 4676 2.963371 CGACGGCTATCTAGGCCC 59.037 66.667 0.00 0.00 46.24 5.80
2197 4681 2.049063 GCTATCTAGGCCCACGCG 60.049 66.667 3.53 3.53 35.02 6.01
2388 4874 6.042777 CGGCTTCTACATTTCTATGAGACAA 58.957 40.000 0.00 0.00 35.65 3.18
2442 6749 2.711711 CAGCGCTGGATGGCTAAAT 58.288 52.632 29.88 0.00 37.41 1.40
2490 6797 2.277756 CGGCGGCGTCTACACTAC 60.278 66.667 24.74 0.00 0.00 2.73
2491 6798 2.758089 CGGCGGCGTCTACACTACT 61.758 63.158 24.74 0.00 0.00 2.57
2493 6800 0.307146 GGCGGCGTCTACACTACTAG 59.693 60.000 9.37 0.00 0.00 2.57
2495 6802 0.942962 CGGCGTCTACACTACTAGGG 59.057 60.000 0.00 0.00 0.00 3.53
2496 6803 1.473965 CGGCGTCTACACTACTAGGGA 60.474 57.143 0.00 0.00 0.00 4.20
2498 6805 3.019564 GGCGTCTACACTACTAGGGAAA 58.980 50.000 0.00 0.00 0.00 3.13
2500 6807 4.439837 GGCGTCTACACTACTAGGGAAAAG 60.440 50.000 0.00 0.00 0.00 2.27
2501 6808 4.670347 CGTCTACACTACTAGGGAAAAGC 58.330 47.826 0.00 0.00 0.00 3.51
2502 6809 4.398673 CGTCTACACTACTAGGGAAAAGCT 59.601 45.833 0.00 0.00 0.00 3.74
2503 6810 5.105837 CGTCTACACTACTAGGGAAAAGCTT 60.106 44.000 0.00 0.00 0.00 3.74
2504 6811 6.094603 CGTCTACACTACTAGGGAAAAGCTTA 59.905 42.308 0.00 0.00 0.00 3.09
2505 6812 7.201803 CGTCTACACTACTAGGGAAAAGCTTAT 60.202 40.741 0.00 0.00 0.00 1.73
2506 6813 9.129532 GTCTACACTACTAGGGAAAAGCTTATA 57.870 37.037 0.00 0.00 0.00 0.98
2507 6814 9.352191 TCTACACTACTAGGGAAAAGCTTATAG 57.648 37.037 0.00 0.49 0.00 1.31
2509 6816 6.183360 ACACTACTAGGGAAAAGCTTATAGGC 60.183 42.308 0.00 0.00 0.00 3.93
2512 6819 4.969359 ACTAGGGAAAAGCTTATAGGCAGA 59.031 41.667 9.75 0.00 34.17 4.26
2513 6820 5.608860 ACTAGGGAAAAGCTTATAGGCAGAT 59.391 40.000 9.75 0.00 34.17 2.90
2514 6821 4.723309 AGGGAAAAGCTTATAGGCAGATG 58.277 43.478 9.75 0.00 34.17 2.90
2515 6822 3.254411 GGGAAAAGCTTATAGGCAGATGC 59.746 47.826 9.75 0.00 41.14 3.91
2516 6823 4.140536 GGAAAAGCTTATAGGCAGATGCT 58.859 43.478 9.75 0.00 41.70 3.79
2518 6825 5.765182 GGAAAAGCTTATAGGCAGATGCTTA 59.235 40.000 9.75 1.58 35.88 3.09
2519 6826 6.293680 GGAAAAGCTTATAGGCAGATGCTTAC 60.294 42.308 9.75 0.00 35.88 2.34
2520 6827 5.559148 AAGCTTATAGGCAGATGCTTACT 57.441 39.130 9.75 0.00 35.36 2.24
2521 6828 6.672266 AAGCTTATAGGCAGATGCTTACTA 57.328 37.500 9.75 0.00 35.36 1.82
2523 6830 5.777732 AGCTTATAGGCAGATGCTTACTAGT 59.222 40.000 9.75 0.00 41.70 2.57
2524 6831 6.948886 AGCTTATAGGCAGATGCTTACTAGTA 59.051 38.462 9.75 0.00 41.70 1.82
2525 6832 7.122055 AGCTTATAGGCAGATGCTTACTAGTAG 59.878 40.741 9.75 0.00 41.70 2.57
2526 6833 5.652994 ATAGGCAGATGCTTACTAGTAGC 57.347 43.478 14.01 14.01 41.70 3.58
2527 6834 2.294791 AGGCAGATGCTTACTAGTAGCG 59.705 50.000 15.18 7.89 41.70 4.26
2528 6835 2.055100 GCAGATGCTTACTAGTAGCGC 58.945 52.381 15.49 15.49 38.21 5.92
2529 6836 2.311462 CAGATGCTTACTAGTAGCGCG 58.689 52.381 16.60 0.00 0.00 6.86
2530 6837 1.267261 AGATGCTTACTAGTAGCGCGG 59.733 52.381 8.83 0.00 0.00 6.46
2532 6839 1.033746 TGCTTACTAGTAGCGCGGGT 61.034 55.000 8.83 0.19 0.00 5.28
2533 6840 0.101939 GCTTACTAGTAGCGCGGGTT 59.898 55.000 8.83 0.00 0.00 4.11
2534 6841 1.470458 GCTTACTAGTAGCGCGGGTTT 60.470 52.381 8.83 0.00 0.00 3.27
2536 6843 3.551659 GCTTACTAGTAGCGCGGGTTTAT 60.552 47.826 8.83 0.00 0.00 1.40
2537 6844 4.320494 GCTTACTAGTAGCGCGGGTTTATA 60.320 45.833 8.83 0.00 0.00 0.98
2538 6845 3.632855 ACTAGTAGCGCGGGTTTATAC 57.367 47.619 8.83 0.00 0.00 1.47
2550 6857 3.382048 GGTTTATACCCCTCGCTACTG 57.618 52.381 0.00 0.00 38.60 2.74
2553 6860 3.513909 TTATACCCCTCGCTACTGCTA 57.486 47.619 0.00 0.00 36.97 3.49
2556 6863 0.549950 ACCCCTCGCTACTGCTACTA 59.450 55.000 0.00 0.00 36.97 1.82
2557 6864 1.064166 ACCCCTCGCTACTGCTACTAA 60.064 52.381 0.00 0.00 36.97 2.24
2558 6865 1.337387 CCCCTCGCTACTGCTACTAAC 59.663 57.143 0.00 0.00 36.97 2.34
2559 6866 2.299521 CCCTCGCTACTGCTACTAACT 58.700 52.381 0.00 0.00 36.97 2.24
2560 6867 3.474600 CCCTCGCTACTGCTACTAACTA 58.525 50.000 0.00 0.00 36.97 2.24
2563 6870 5.295950 CCTCGCTACTGCTACTAACTAGTA 58.704 45.833 0.00 0.00 37.73 1.82
2575 6882 3.828451 ACTAACTAGTAGCGTGGGTTTCA 59.172 43.478 0.00 0.00 34.13 2.69
2576 6883 2.738013 ACTAGTAGCGTGGGTTTCAC 57.262 50.000 0.00 0.00 42.74 3.18
2586 6893 4.611961 GGTTTCACCCCTCGCTAC 57.388 61.111 0.00 0.00 30.04 3.58
2587 6894 1.980844 GGTTTCACCCCTCGCTACT 59.019 57.895 0.00 0.00 30.04 2.57
2589 6896 1.134877 GGTTTCACCCCTCGCTACTAC 60.135 57.143 0.00 0.00 30.04 2.73
2590 6897 1.823610 GTTTCACCCCTCGCTACTACT 59.176 52.381 0.00 0.00 0.00 2.57
2591 6898 3.019564 GTTTCACCCCTCGCTACTACTA 58.980 50.000 0.00 0.00 0.00 1.82
2592 6899 3.370840 TTCACCCCTCGCTACTACTAA 57.629 47.619 0.00 0.00 0.00 2.24
2593 6900 2.928334 TCACCCCTCGCTACTACTAAG 58.072 52.381 0.00 0.00 0.00 2.18
2594 6901 2.240667 TCACCCCTCGCTACTACTAAGT 59.759 50.000 0.00 0.00 39.91 2.24
2596 6903 3.022406 ACCCCTCGCTACTACTAAGTTG 58.978 50.000 0.00 0.00 37.15 3.16
2597 6904 3.285484 CCCCTCGCTACTACTAAGTTGA 58.715 50.000 0.00 0.00 37.15 3.18
2598 6905 3.890147 CCCCTCGCTACTACTAAGTTGAT 59.110 47.826 0.00 0.00 37.15 2.57
2599 6906 5.068636 CCCCTCGCTACTACTAAGTTGATA 58.931 45.833 0.00 0.00 37.15 2.15
2600 6907 5.181622 CCCCTCGCTACTACTAAGTTGATAG 59.818 48.000 0.00 0.00 37.15 2.08
2601 6908 5.764192 CCCTCGCTACTACTAAGTTGATAGT 59.236 44.000 6.24 6.24 39.41 2.12
2602 6909 6.933521 CCCTCGCTACTACTAAGTTGATAGTA 59.066 42.308 7.49 7.49 37.34 1.82
2611 6918 6.374565 ACTAAGTTGATAGTAGTAGCGTGG 57.625 41.667 0.00 0.00 34.40 4.94
2613 6920 3.629087 AGTTGATAGTAGTAGCGTGGGT 58.371 45.455 0.00 0.00 0.00 4.51
2614 6921 4.021916 AGTTGATAGTAGTAGCGTGGGTT 58.978 43.478 0.00 0.00 0.00 4.11
2615 6922 4.465305 AGTTGATAGTAGTAGCGTGGGTTT 59.535 41.667 0.00 0.00 0.00 3.27
2617 6924 5.410355 TGATAGTAGTAGCGTGGGTTTTT 57.590 39.130 0.00 0.00 0.00 1.94
2618 6925 6.528537 TGATAGTAGTAGCGTGGGTTTTTA 57.471 37.500 0.00 0.00 0.00 1.52
2619 6926 6.934056 TGATAGTAGTAGCGTGGGTTTTTAA 58.066 36.000 0.00 0.00 0.00 1.52
2633 6940 3.072211 GTTTTTAACCCTCGCTACTGCT 58.928 45.455 0.00 0.00 36.97 4.24
2635 6942 4.540359 TTTTAACCCTCGCTACTGCTAA 57.460 40.909 0.00 0.00 36.97 3.09
2636 6943 3.795623 TTAACCCTCGCTACTGCTAAG 57.204 47.619 0.00 0.00 36.97 2.18
2637 6944 0.175989 AACCCTCGCTACTGCTAAGC 59.824 55.000 0.00 0.00 36.97 3.09
2643 6950 3.259832 GCTACTGCTAAGCGGTCTC 57.740 57.895 0.00 0.00 45.94 3.36
2644 6951 0.741915 GCTACTGCTAAGCGGTCTCT 59.258 55.000 0.00 0.00 45.94 3.10
2645 6952 1.948145 GCTACTGCTAAGCGGTCTCTA 59.052 52.381 0.00 0.00 45.94 2.43
2646 6953 2.287129 GCTACTGCTAAGCGGTCTCTAC 60.287 54.545 0.00 0.00 45.94 2.59
2647 6954 1.104630 ACTGCTAAGCGGTCTCTACC 58.895 55.000 0.00 0.00 45.94 3.18
2655 6962 2.682494 GGTCTCTACCGTGCCCCA 60.682 66.667 0.00 0.00 35.62 4.96
2658 6965 1.379977 TCTCTACCGTGCCCCAGAG 60.380 63.158 0.00 0.00 36.64 3.35
2659 6966 1.379977 CTCTACCGTGCCCCAGAGA 60.380 63.158 0.00 0.00 37.33 3.10
2661 6968 1.982395 CTACCGTGCCCCAGAGACA 60.982 63.158 0.00 0.00 0.00 3.41
2662 6969 1.305802 TACCGTGCCCCAGAGACAT 60.306 57.895 0.00 0.00 0.00 3.06
2666 6973 2.934932 TGCCCCAGAGACATGCCA 60.935 61.111 0.00 0.00 0.00 4.92
2667 6974 2.311070 TGCCCCAGAGACATGCCAT 61.311 57.895 0.00 0.00 0.00 4.40
2668 6975 0.987613 TGCCCCAGAGACATGCCATA 60.988 55.000 0.00 0.00 0.00 2.74
2669 6976 0.250640 GCCCCAGAGACATGCCATAG 60.251 60.000 0.00 0.00 0.00 2.23
2671 6978 2.329267 CCCCAGAGACATGCCATAGTA 58.671 52.381 0.00 0.00 0.00 1.82
2672 6979 2.301296 CCCCAGAGACATGCCATAGTAG 59.699 54.545 0.00 0.00 0.00 2.57
2674 6981 4.152647 CCCAGAGACATGCCATAGTAGTA 58.847 47.826 0.00 0.00 0.00 1.82
2675 6982 4.219507 CCCAGAGACATGCCATAGTAGTAG 59.780 50.000 0.00 0.00 0.00 2.57
2676 6983 4.830046 CCAGAGACATGCCATAGTAGTAGT 59.170 45.833 0.00 0.00 0.00 2.73
2677 6984 5.278709 CCAGAGACATGCCATAGTAGTAGTG 60.279 48.000 0.00 0.00 0.00 2.74
2678 6985 5.532779 CAGAGACATGCCATAGTAGTAGTGA 59.467 44.000 0.00 0.00 0.00 3.41
2679 6986 5.767665 AGAGACATGCCATAGTAGTAGTGAG 59.232 44.000 0.00 0.00 0.00 3.51
2680 6987 4.830046 AGACATGCCATAGTAGTAGTGAGG 59.170 45.833 0.00 0.00 0.00 3.86
2681 6988 3.898123 ACATGCCATAGTAGTAGTGAGGG 59.102 47.826 0.00 0.00 0.00 4.30
2682 6989 2.958818 TGCCATAGTAGTAGTGAGGGG 58.041 52.381 0.00 0.00 0.00 4.79
2683 6990 2.246588 TGCCATAGTAGTAGTGAGGGGT 59.753 50.000 0.00 0.00 0.00 4.95
2684 6991 3.464456 TGCCATAGTAGTAGTGAGGGGTA 59.536 47.826 0.00 0.00 0.00 3.69
2685 6992 4.107473 TGCCATAGTAGTAGTGAGGGGTAT 59.893 45.833 0.00 0.00 0.00 2.73
2686 6993 5.314039 TGCCATAGTAGTAGTGAGGGGTATA 59.686 44.000 0.00 0.00 0.00 1.47
2690 6997 7.178097 CCATAGTAGTAGTGAGGGGTATAAACC 59.822 44.444 0.00 0.00 45.97 3.27
2703 7860 2.503920 ATAAACCCAGTAGTAGCGCG 57.496 50.000 0.00 0.00 0.00 6.86
2712 7869 3.732721 CCAGTAGTAGCGCGGTTTTATAC 59.267 47.826 19.09 14.08 0.00 1.47
2713 7870 3.732721 CAGTAGTAGCGCGGTTTTATACC 59.267 47.826 19.09 0.00 44.03 2.73
2714 7871 2.229675 AGTAGCGCGGTTTTATACCC 57.770 50.000 19.09 0.00 44.70 3.69
2715 7872 1.202568 AGTAGCGCGGTTTTATACCCC 60.203 52.381 19.09 0.00 44.70 4.95
2716 7873 1.122227 TAGCGCGGTTTTATACCCCT 58.878 50.000 19.09 0.00 44.70 4.79
2717 7874 0.179065 AGCGCGGTTTTATACCCCTC 60.179 55.000 4.23 0.00 44.70 4.30
2718 7875 1.493134 GCGCGGTTTTATACCCCTCG 61.493 60.000 8.83 0.00 44.70 4.63
2719 7876 1.493134 CGCGGTTTTATACCCCTCGC 61.493 60.000 0.00 0.00 44.70 5.03
2721 7878 1.069049 GCGGTTTTATACCCCTCGCTA 59.931 52.381 0.00 0.00 44.70 4.26
2722 7879 2.747436 CGGTTTTATACCCCTCGCTAC 58.253 52.381 0.00 0.00 44.70 3.58
2724 7881 3.569701 CGGTTTTATACCCCTCGCTACTA 59.430 47.826 0.00 0.00 44.70 1.82
2726 7883 4.586421 GGTTTTATACCCCTCGCTACTACT 59.414 45.833 0.00 0.00 41.43 2.57
2729 7886 7.366513 GTTTTATACCCCTCGCTACTACTAAG 58.633 42.308 0.00 0.00 0.00 2.18
2731 7888 5.832539 ATACCCCTCGCTACTACTAAGTA 57.167 43.478 0.00 0.00 37.15 2.24
2732 7889 3.814625 ACCCCTCGCTACTACTAAGTAC 58.185 50.000 0.00 0.00 37.15 2.73
2733 7890 2.805099 CCCCTCGCTACTACTAAGTACG 59.195 54.545 0.00 0.00 37.15 3.67
2734 7891 3.493350 CCCCTCGCTACTACTAAGTACGA 60.493 52.174 0.00 8.70 38.36 3.43
2735 7892 3.740321 CCCTCGCTACTACTAAGTACGAG 59.260 52.174 19.29 19.29 46.07 4.18
2737 7894 4.367450 CTCGCTACTACTAAGTACGAGGT 58.633 47.826 18.89 5.34 44.76 3.85
2738 7895 5.515797 TCGCTACTACTAAGTACGAGGTA 57.484 43.478 0.00 0.25 37.09 3.08
2739 7896 5.524284 TCGCTACTACTAAGTACGAGGTAG 58.476 45.833 15.42 15.42 37.09 3.18
2740 7897 4.683781 CGCTACTACTAAGTACGAGGTAGG 59.316 50.000 18.78 9.00 36.06 3.18
2742 7899 5.465056 GCTACTACTAAGTACGAGGTAGGTG 59.535 48.000 18.78 13.90 37.15 4.00
2744 7901 6.054860 ACTACTAAGTACGAGGTAGGTGAA 57.945 41.667 18.78 0.00 36.81 3.18
2745 7902 6.112058 ACTACTAAGTACGAGGTAGGTGAAG 58.888 44.000 18.78 4.24 36.81 3.02
2750 7907 3.509184 AGTACGAGGTAGGTGAAGTTTCC 59.491 47.826 0.00 0.00 0.00 3.13
2751 7908 2.322658 ACGAGGTAGGTGAAGTTTCCA 58.677 47.619 0.00 0.00 0.00 3.53
2752 7909 2.904434 ACGAGGTAGGTGAAGTTTCCAT 59.096 45.455 0.00 0.00 0.00 3.41
2753 7910 4.091549 ACGAGGTAGGTGAAGTTTCCATA 58.908 43.478 0.00 0.00 0.00 2.74
2754 7911 4.715297 ACGAGGTAGGTGAAGTTTCCATAT 59.285 41.667 0.00 0.00 0.00 1.78
2755 7912 5.163437 ACGAGGTAGGTGAAGTTTCCATATC 60.163 44.000 0.00 0.00 0.00 1.63
2756 7913 5.612351 GAGGTAGGTGAAGTTTCCATATCC 58.388 45.833 1.85 0.00 0.00 2.59
2757 7914 5.289510 AGGTAGGTGAAGTTTCCATATCCT 58.710 41.667 0.00 0.00 0.00 3.24
2759 7916 4.408182 AGGTGAAGTTTCCATATCCTCG 57.592 45.455 1.85 0.00 0.00 4.63
2760 7917 3.134804 AGGTGAAGTTTCCATATCCTCGG 59.865 47.826 1.85 0.00 0.00 4.63
2761 7918 2.872858 GTGAAGTTTCCATATCCTCGGC 59.127 50.000 0.00 0.00 0.00 5.54
2763 7920 0.393077 AGTTTCCATATCCTCGGCCG 59.607 55.000 22.12 22.12 0.00 6.13
2764 7921 0.391597 GTTTCCATATCCTCGGCCGA 59.608 55.000 29.03 29.03 0.00 5.54
2765 7922 1.124780 TTTCCATATCCTCGGCCGAA 58.875 50.000 30.53 16.59 0.00 4.30
2768 7925 0.108138 CCATATCCTCGGCCGAATCC 60.108 60.000 30.53 0.00 0.00 3.01
2769 7926 0.108138 CATATCCTCGGCCGAATCCC 60.108 60.000 30.53 0.00 0.00 3.85
2770 7927 0.252284 ATATCCTCGGCCGAATCCCT 60.252 55.000 30.53 14.23 0.00 4.20
2772 7929 3.930012 CCTCGGCCGAATCCCTCC 61.930 72.222 30.53 0.00 0.00 4.30
2773 7930 2.840102 CTCGGCCGAATCCCTCCT 60.840 66.667 30.53 0.00 0.00 3.69
2774 7931 2.838225 TCGGCCGAATCCCTCCTC 60.838 66.667 28.99 0.00 0.00 3.71
2776 7933 2.862223 CGGCCGAATCCCTCCTCTC 61.862 68.421 24.07 0.00 0.00 3.20
2777 7934 1.458588 GGCCGAATCCCTCCTCTCT 60.459 63.158 0.00 0.00 0.00 3.10
2778 7935 1.468506 GGCCGAATCCCTCCTCTCTC 61.469 65.000 0.00 0.00 0.00 3.20
2780 7937 0.830023 CCGAATCCCTCCTCTCTCCC 60.830 65.000 0.00 0.00 0.00 4.30
2782 7939 1.821666 CGAATCCCTCCTCTCTCCCTC 60.822 61.905 0.00 0.00 0.00 4.30
2783 7940 1.219213 GAATCCCTCCTCTCTCCCTCA 59.781 57.143 0.00 0.00 0.00 3.86
2785 7942 0.553862 TCCCTCCTCTCTCCCTCACT 60.554 60.000 0.00 0.00 0.00 3.41
2786 7943 0.106217 CCCTCCTCTCTCCCTCACTC 60.106 65.000 0.00 0.00 0.00 3.51
2788 7945 0.106217 CTCCTCTCTCCCTCACTCCC 60.106 65.000 0.00 0.00 0.00 4.30
2790 7947 1.075600 CTCTCTCCCTCACTCCCCC 60.076 68.421 0.00 0.00 0.00 5.40
2804 7961 4.224105 CCCCCTCTCTCCATAGGC 57.776 66.667 0.00 0.00 0.00 3.93
2805 7962 1.551358 CCCCCTCTCTCCATAGGCT 59.449 63.158 0.00 0.00 0.00 4.58
2806 7963 0.544120 CCCCCTCTCTCCATAGGCTC 60.544 65.000 0.00 0.00 0.00 4.70
2807 7964 0.486879 CCCCTCTCTCCATAGGCTCT 59.513 60.000 0.00 0.00 0.00 4.09
2808 7965 1.549950 CCCCTCTCTCCATAGGCTCTC 60.550 61.905 0.00 0.00 0.00 3.20
2809 7966 1.549950 CCCTCTCTCCATAGGCTCTCC 60.550 61.905 0.00 0.00 0.00 3.71
2810 7967 1.428912 CCTCTCTCCATAGGCTCTCCT 59.571 57.143 0.00 0.00 46.57 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 0.178767 TTCCATGACGAGGCCATCAG 59.821 55.000 5.01 0.00 0.00 2.90
3 4 0.839277 ATTCCATGACGAGGCCATCA 59.161 50.000 5.01 6.12 0.00 3.07
4 5 1.202687 TCATTCCATGACGAGGCCATC 60.203 52.381 5.01 0.00 33.59 3.51
5 6 0.839277 TCATTCCATGACGAGGCCAT 59.161 50.000 5.01 0.00 33.59 4.40
6 7 2.295904 TCATTCCATGACGAGGCCA 58.704 52.632 5.01 0.00 33.59 5.36
14 15 5.197224 AGATTCTTTGGGTCATTCCATGA 57.803 39.130 0.00 0.00 36.58 3.07
15 16 5.927281 AAGATTCTTTGGGTCATTCCATG 57.073 39.130 0.00 0.00 36.58 3.66
16 17 8.613922 AATAAAGATTCTTTGGGTCATTCCAT 57.386 30.769 19.60 0.88 36.58 3.41
17 18 7.673504 TGAATAAAGATTCTTTGGGTCATTCCA 59.326 33.333 19.60 9.38 41.87 3.53
18 19 8.066612 TGAATAAAGATTCTTTGGGTCATTCC 57.933 34.615 19.60 7.54 41.87 3.01
19 20 9.358872 GTTGAATAAAGATTCTTTGGGTCATTC 57.641 33.333 19.60 18.20 41.87 2.67
20 21 8.869109 TGTTGAATAAAGATTCTTTGGGTCATT 58.131 29.630 19.60 11.57 41.87 2.57
21 22 8.306761 GTGTTGAATAAAGATTCTTTGGGTCAT 58.693 33.333 19.60 4.11 41.87 3.06
23 24 7.090808 GGTGTTGAATAAAGATTCTTTGGGTC 58.909 38.462 19.60 13.92 41.87 4.46
24 25 6.294508 CGGTGTTGAATAAAGATTCTTTGGGT 60.295 38.462 19.60 6.38 41.87 4.51
25 26 6.092748 CGGTGTTGAATAAAGATTCTTTGGG 58.907 40.000 19.60 0.00 41.87 4.12
26 27 6.677913 ACGGTGTTGAATAAAGATTCTTTGG 58.322 36.000 19.60 1.78 41.87 3.28
27 28 7.359595 TGACGGTGTTGAATAAAGATTCTTTG 58.640 34.615 19.60 3.70 41.87 2.77
28 29 7.504924 TGACGGTGTTGAATAAAGATTCTTT 57.495 32.000 15.57 15.57 41.87 2.52
29 30 7.390440 TGATGACGGTGTTGAATAAAGATTCTT 59.610 33.333 0.00 0.00 41.87 2.52
31 32 7.072177 TGATGACGGTGTTGAATAAAGATTC 57.928 36.000 0.00 0.00 41.72 2.52
32 33 6.403636 GCTGATGACGGTGTTGAATAAAGATT 60.404 38.462 0.00 0.00 0.00 2.40
33 34 5.065218 GCTGATGACGGTGTTGAATAAAGAT 59.935 40.000 0.00 0.00 0.00 2.40
35 36 4.651994 GCTGATGACGGTGTTGAATAAAG 58.348 43.478 0.00 0.00 0.00 1.85
36 37 3.124466 CGCTGATGACGGTGTTGAATAAA 59.876 43.478 0.00 0.00 0.00 1.40
37 38 2.670905 CGCTGATGACGGTGTTGAATAA 59.329 45.455 0.00 0.00 0.00 1.40
38 39 2.267426 CGCTGATGACGGTGTTGAATA 58.733 47.619 0.00 0.00 0.00 1.75
39 40 1.078709 CGCTGATGACGGTGTTGAAT 58.921 50.000 0.00 0.00 0.00 2.57
40 41 1.565156 GCGCTGATGACGGTGTTGAA 61.565 55.000 0.00 0.00 35.56 2.69
41 42 2.027073 GCGCTGATGACGGTGTTGA 61.027 57.895 0.00 0.00 35.56 3.18
42 43 2.316867 TGCGCTGATGACGGTGTTG 61.317 57.895 9.73 0.00 35.56 3.33
43 44 2.030412 TGCGCTGATGACGGTGTT 59.970 55.556 9.73 0.00 35.56 3.32
44 45 2.738521 GTGCGCTGATGACGGTGT 60.739 61.111 9.73 0.00 35.56 4.16
45 46 3.490759 GGTGCGCTGATGACGGTG 61.491 66.667 9.73 0.00 36.14 4.94
47 48 4.794439 TCGGTGCGCTGATGACGG 62.794 66.667 9.73 2.16 0.00 4.79
48 49 2.792290 CTTCGGTGCGCTGATGACG 61.792 63.158 15.09 4.29 0.00 4.35
50 51 1.944234 TAGCTTCGGTGCGCTGATGA 61.944 55.000 22.36 3.43 37.05 2.92
52 53 0.807667 CTTAGCTTCGGTGCGCTGAT 60.808 55.000 10.13 0.00 37.05 2.90
53 54 1.446099 CTTAGCTTCGGTGCGCTGA 60.446 57.895 9.73 4.21 37.05 4.26
55 56 1.446272 GTCTTAGCTTCGGTGCGCT 60.446 57.895 9.73 0.00 40.15 5.92
56 57 2.789203 CGTCTTAGCTTCGGTGCGC 61.789 63.158 0.00 0.00 38.13 6.09
57 58 0.525668 ATCGTCTTAGCTTCGGTGCG 60.526 55.000 0.00 0.00 38.13 5.34
58 59 0.924090 CATCGTCTTAGCTTCGGTGC 59.076 55.000 0.00 0.00 0.00 5.01
60 61 2.230508 TGTTCATCGTCTTAGCTTCGGT 59.769 45.455 0.00 0.00 0.00 4.69
61 62 2.854777 CTGTTCATCGTCTTAGCTTCGG 59.145 50.000 0.00 0.00 0.00 4.30
62 63 3.502920 ACTGTTCATCGTCTTAGCTTCG 58.497 45.455 0.00 0.00 0.00 3.79
63 64 5.847670 AAACTGTTCATCGTCTTAGCTTC 57.152 39.130 0.00 0.00 0.00 3.86
65 66 7.724305 TTTTAAACTGTTCATCGTCTTAGCT 57.276 32.000 0.00 0.00 0.00 3.32
66 67 7.322938 GGTTTTTAAACTGTTCATCGTCTTAGC 59.677 37.037 5.43 0.00 38.89 3.09
67 68 8.557029 AGGTTTTTAAACTGTTCATCGTCTTAG 58.443 33.333 5.43 0.00 38.89 2.18
68 69 8.441312 AGGTTTTTAAACTGTTCATCGTCTTA 57.559 30.769 5.43 0.00 38.89 2.10
69 70 7.329588 AGGTTTTTAAACTGTTCATCGTCTT 57.670 32.000 5.43 0.00 38.89 3.01
70 71 6.937436 AGGTTTTTAAACTGTTCATCGTCT 57.063 33.333 5.43 0.00 38.89 4.18
71 72 9.750882 GTATAGGTTTTTAAACTGTTCATCGTC 57.249 33.333 5.43 0.00 38.89 4.20
72 73 9.498176 AGTATAGGTTTTTAAACTGTTCATCGT 57.502 29.630 5.43 0.00 38.89 3.73
76 77 9.979578 TCGTAGTATAGGTTTTTAAACTGTTCA 57.020 29.630 5.43 0.00 38.89 3.18
78 79 9.428097 CCTCGTAGTATAGGTTTTTAAACTGTT 57.572 33.333 5.43 0.00 38.89 3.16
79 80 8.806146 TCCTCGTAGTATAGGTTTTTAAACTGT 58.194 33.333 5.43 0.00 38.89 3.55
80 81 9.643693 TTCCTCGTAGTATAGGTTTTTAAACTG 57.356 33.333 5.43 0.00 38.89 3.16
81 82 9.866798 CTTCCTCGTAGTATAGGTTTTTAAACT 57.133 33.333 5.43 0.00 38.89 2.66
82 83 9.645059 ACTTCCTCGTAGTATAGGTTTTTAAAC 57.355 33.333 0.00 0.00 38.17 2.01
89 90 9.813446 CATTTTTACTTCCTCGTAGTATAGGTT 57.187 33.333 0.00 0.00 34.30 3.50
90 91 9.193806 TCATTTTTACTTCCTCGTAGTATAGGT 57.806 33.333 0.00 0.00 34.30 3.08
95 96 7.977853 GTGGATCATTTTTACTTCCTCGTAGTA 59.022 37.037 0.00 0.00 0.00 1.82
97 98 6.816640 TGTGGATCATTTTTACTTCCTCGTAG 59.183 38.462 0.00 0.00 0.00 3.51
98 99 6.592607 GTGTGGATCATTTTTACTTCCTCGTA 59.407 38.462 0.00 0.00 0.00 3.43
99 100 5.411669 GTGTGGATCATTTTTACTTCCTCGT 59.588 40.000 0.00 0.00 0.00 4.18
100 101 5.445939 CGTGTGGATCATTTTTACTTCCTCG 60.446 44.000 0.00 0.00 0.00 4.63
101 102 5.673818 GCGTGTGGATCATTTTTACTTCCTC 60.674 44.000 0.00 0.00 0.00 3.71
103 104 4.083003 TGCGTGTGGATCATTTTTACTTCC 60.083 41.667 0.00 0.00 0.00 3.46
104 105 5.041951 TGCGTGTGGATCATTTTTACTTC 57.958 39.130 0.00 0.00 0.00 3.01
106 107 4.142403 CCATGCGTGTGGATCATTTTTACT 60.142 41.667 4.96 0.00 42.02 2.24
107 108 4.104776 CCATGCGTGTGGATCATTTTTAC 58.895 43.478 4.96 0.00 42.02 2.01
108 109 4.013050 TCCATGCGTGTGGATCATTTTTA 58.987 39.130 4.96 0.00 43.20 1.52
109 110 2.824936 TCCATGCGTGTGGATCATTTTT 59.175 40.909 4.96 0.00 43.20 1.94
110 111 2.445427 TCCATGCGTGTGGATCATTTT 58.555 42.857 4.96 0.00 43.20 1.82
111 112 2.127271 TCCATGCGTGTGGATCATTT 57.873 45.000 4.96 0.00 43.20 2.32
112 113 3.880040 TCCATGCGTGTGGATCATT 57.120 47.368 4.96 0.00 43.20 2.57
118 119 2.896854 CCGGATCCATGCGTGTGG 60.897 66.667 13.41 0.40 40.15 4.17
125 126 4.626081 GGGGTCGCCGGATCCATG 62.626 72.222 13.41 2.95 46.01 3.66
144 145 3.324099 CTCGGTCGTCGGTGGTGAG 62.324 68.421 0.00 0.00 39.77 3.51
145 146 3.359523 CTCGGTCGTCGGTGGTGA 61.360 66.667 0.00 0.00 39.77 4.02
146 147 4.415332 CCTCGGTCGTCGGTGGTG 62.415 72.222 0.00 0.00 39.77 4.17
147 148 4.962836 ACCTCGGTCGTCGGTGGT 62.963 66.667 7.86 7.86 39.69 4.16
148 149 3.677648 AACCTCGGTCGTCGGTGG 61.678 66.667 6.74 6.74 39.77 4.61
149 150 2.430244 CAACCTCGGTCGTCGGTG 60.430 66.667 7.56 0.00 39.77 4.94
150 151 4.353437 GCAACCTCGGTCGTCGGT 62.353 66.667 0.00 2.45 39.77 4.69
187 188 1.305930 AATTTTCCAGCGGCGTCCTC 61.306 55.000 9.37 0.00 0.00 3.71
190 191 1.154035 CCAATTTTCCAGCGGCGTC 60.154 57.895 9.37 0.13 0.00 5.19
191 192 2.961768 CCAATTTTCCAGCGGCGT 59.038 55.556 9.37 0.00 0.00 5.68
192 193 2.506881 GCCAATTTTCCAGCGGCG 60.507 61.111 0.51 0.51 32.14 6.46
193 194 2.506881 CGCCAATTTTCCAGCGGC 60.507 61.111 0.00 0.00 44.64 6.53
196 197 0.171231 GGAGACGCCAATTTTCCAGC 59.829 55.000 0.00 0.00 36.34 4.85
197 198 1.470098 CAGGAGACGCCAATTTTCCAG 59.530 52.381 0.00 0.00 40.02 3.86
199 200 0.811281 CCAGGAGACGCCAATTTTCC 59.189 55.000 0.00 0.00 40.02 3.13
200 201 0.171231 GCCAGGAGACGCCAATTTTC 59.829 55.000 0.00 0.00 40.02 2.29
201 202 1.586154 CGCCAGGAGACGCCAATTTT 61.586 55.000 0.00 0.00 40.02 1.82
202 203 2.040544 CGCCAGGAGACGCCAATTT 61.041 57.895 0.00 0.00 40.02 1.82
204 205 4.473520 CCGCCAGGAGACGCCAAT 62.474 66.667 0.00 0.00 41.02 3.16
238 239 3.132139 TTCCTCTCGTCCCTCGCG 61.132 66.667 0.00 0.00 39.67 5.87
239 240 2.490685 GTTCCTCTCGTCCCTCGC 59.509 66.667 0.00 0.00 39.67 5.03
240 241 2.762234 CCGTTCCTCTCGTCCCTCG 61.762 68.421 0.00 0.00 41.41 4.63
241 242 3.066233 GCCGTTCCTCTCGTCCCTC 62.066 68.421 0.00 0.00 0.00 4.30
242 243 3.069318 GCCGTTCCTCTCGTCCCT 61.069 66.667 0.00 0.00 0.00 4.20
243 244 4.493747 CGCCGTTCCTCTCGTCCC 62.494 72.222 0.00 0.00 0.00 4.46
245 246 4.117661 AGCGCCGTTCCTCTCGTC 62.118 66.667 2.29 0.00 0.00 4.20
246 247 4.421479 CAGCGCCGTTCCTCTCGT 62.421 66.667 2.29 0.00 0.00 4.18
248 249 3.941657 AAGCAGCGCCGTTCCTCTC 62.942 63.158 2.29 0.00 0.00 3.20
249 250 4.008933 AAGCAGCGCCGTTCCTCT 62.009 61.111 2.29 0.00 0.00 3.69
250 251 3.793144 CAAGCAGCGCCGTTCCTC 61.793 66.667 2.29 0.00 0.00 3.71
251 252 4.626081 ACAAGCAGCGCCGTTCCT 62.626 61.111 2.29 0.00 0.00 3.36
252 253 4.389576 CACAAGCAGCGCCGTTCC 62.390 66.667 2.29 0.00 0.00 3.62
259 260 2.301902 GATTCCGAGCACAAGCAGCG 62.302 60.000 0.00 0.00 45.49 5.18
260 261 1.427020 GATTCCGAGCACAAGCAGC 59.573 57.895 0.00 0.00 45.49 5.25
261 262 1.372087 GGGATTCCGAGCACAAGCAG 61.372 60.000 0.00 0.00 45.49 4.24
262 263 1.377202 GGGATTCCGAGCACAAGCA 60.377 57.895 0.00 0.00 45.49 3.91
263 264 3.502572 GGGATTCCGAGCACAAGC 58.497 61.111 0.00 0.00 42.56 4.01
274 275 1.066002 TCGTACGTGAATCCGGGATTC 59.934 52.381 33.22 33.22 45.93 2.52
276 277 1.268899 GATCGTACGTGAATCCGGGAT 59.731 52.381 16.05 2.97 0.00 3.85
277 278 0.664761 GATCGTACGTGAATCCGGGA 59.335 55.000 16.05 0.00 0.00 5.14
278 279 0.666913 AGATCGTACGTGAATCCGGG 59.333 55.000 16.05 0.00 0.00 5.73
279 280 1.602851 AGAGATCGTACGTGAATCCGG 59.397 52.381 16.05 0.00 0.00 5.14
280 281 3.246936 TGTAGAGATCGTACGTGAATCCG 59.753 47.826 16.05 0.00 0.00 4.18
281 282 4.272991 ACTGTAGAGATCGTACGTGAATCC 59.727 45.833 16.05 5.66 0.00 3.01
282 283 5.199000 CACTGTAGAGATCGTACGTGAATC 58.801 45.833 16.05 11.03 31.94 2.52
283 284 4.035324 CCACTGTAGAGATCGTACGTGAAT 59.965 45.833 16.05 0.74 31.94 2.57
284 285 3.373130 CCACTGTAGAGATCGTACGTGAA 59.627 47.826 16.05 0.00 31.94 3.18
285 286 2.934553 CCACTGTAGAGATCGTACGTGA 59.065 50.000 16.05 0.00 31.94 4.35
286 287 2.539142 GCCACTGTAGAGATCGTACGTG 60.539 54.545 16.05 16.76 0.00 4.49
287 288 1.669779 GCCACTGTAGAGATCGTACGT 59.330 52.381 16.05 2.33 0.00 3.57
288 289 1.941294 AGCCACTGTAGAGATCGTACG 59.059 52.381 9.53 9.53 0.00 3.67
289 290 2.032722 CGAGCCACTGTAGAGATCGTAC 60.033 54.545 0.00 2.25 0.00 3.67
291 292 1.018148 CGAGCCACTGTAGAGATCGT 58.982 55.000 0.00 0.00 0.00 3.73
294 295 1.107114 CCACGAGCCACTGTAGAGAT 58.893 55.000 0.00 0.00 0.00 2.75
295 296 0.251209 ACCACGAGCCACTGTAGAGA 60.251 55.000 0.00 0.00 0.00 3.10
296 297 0.603569 AACCACGAGCCACTGTAGAG 59.396 55.000 0.00 0.00 0.00 2.43
297 298 1.000506 GAAACCACGAGCCACTGTAGA 59.999 52.381 0.00 0.00 0.00 2.59
298 299 1.429463 GAAACCACGAGCCACTGTAG 58.571 55.000 0.00 0.00 0.00 2.74
299 300 0.034337 GGAAACCACGAGCCACTGTA 59.966 55.000 0.00 0.00 0.00 2.74
301 302 1.071471 AGGAAACCACGAGCCACTG 59.929 57.895 0.00 0.00 0.00 3.66
302 303 1.071471 CAGGAAACCACGAGCCACT 59.929 57.895 0.00 0.00 0.00 4.00
303 304 2.617274 GCAGGAAACCACGAGCCAC 61.617 63.158 0.00 0.00 0.00 5.01
304 305 2.281484 GCAGGAAACCACGAGCCA 60.281 61.111 0.00 0.00 0.00 4.75
309 310 0.813610 TGTCACAGCAGGAAACCACG 60.814 55.000 0.00 0.00 0.00 4.94
434 435 2.545113 GCGTCGATAAGGCCTGTATCAA 60.545 50.000 23.33 11.30 32.52 2.57
436 437 1.000607 TGCGTCGATAAGGCCTGTATC 60.001 52.381 5.69 14.52 37.99 2.24
437 438 1.037493 TGCGTCGATAAGGCCTGTAT 58.963 50.000 5.69 6.59 37.99 2.29
438 439 0.818938 TTGCGTCGATAAGGCCTGTA 59.181 50.000 5.69 0.91 37.99 2.74
440 441 1.083489 TTTTGCGTCGATAAGGCCTG 58.917 50.000 5.69 0.00 37.99 4.85
457 458 5.368989 CCTCGATAAGGCCTGTATCTTTTT 58.631 41.667 22.08 3.87 38.67 1.94
458 459 4.962155 CCTCGATAAGGCCTGTATCTTTT 58.038 43.478 22.08 4.48 38.67 2.27
459 460 4.608948 CCTCGATAAGGCCTGTATCTTT 57.391 45.455 22.08 5.10 38.67 2.52
473 477 3.276857 GGATAGGTCGTATGCCTCGATA 58.723 50.000 1.73 0.00 39.45 2.92
492 496 2.344592 TGCCTTTCTGTTTAGGAGGGA 58.655 47.619 0.00 0.00 33.13 4.20
499 503 4.501071 GAGGTCGTATGCCTTTCTGTTTA 58.499 43.478 0.31 0.00 36.29 2.01
560 564 1.002624 TTGGCGGCTAAGGGTCTTG 60.003 57.895 11.43 0.00 0.00 3.02
564 568 3.204467 TTGCTTGGCGGCTAAGGGT 62.204 57.895 24.61 0.00 0.00 4.34
565 569 2.361104 TTGCTTGGCGGCTAAGGG 60.361 61.111 24.61 4.73 0.00 3.95
566 570 3.056313 GCTTGCTTGGCGGCTAAGG 62.056 63.158 24.61 11.39 0.00 2.69
567 571 1.865788 TTGCTTGCTTGGCGGCTAAG 61.866 55.000 20.28 20.28 32.90 2.18
569 573 1.250154 AATTGCTTGCTTGGCGGCTA 61.250 50.000 11.43 0.46 32.90 3.93
571 575 2.047939 AATTGCTTGCTTGGCGGC 60.048 55.556 0.00 0.00 0.00 6.53
572 576 1.738830 CCAATTGCTTGCTTGGCGG 60.739 57.895 0.00 0.00 35.84 6.13
573 577 0.243365 TACCAATTGCTTGCTTGGCG 59.757 50.000 11.85 0.00 44.74 5.69
574 578 1.404583 CCTACCAATTGCTTGCTTGGC 60.405 52.381 11.85 0.00 44.74 4.52
575 579 2.170166 TCCTACCAATTGCTTGCTTGG 58.830 47.619 10.75 10.75 46.03 3.61
576 580 3.698040 AGATCCTACCAATTGCTTGCTTG 59.302 43.478 0.00 0.00 0.00 4.01
577 581 3.698040 CAGATCCTACCAATTGCTTGCTT 59.302 43.478 0.00 0.00 0.00 3.91
627 650 1.038280 GGATGGAGGACGTACGGAAT 58.962 55.000 21.06 3.98 0.00 3.01
1198 2725 3.508762 CTGCATCCAAGACAAAAGCATC 58.491 45.455 0.00 0.00 0.00 3.91
1387 2956 2.991250 ACATTTTCCCTCCATGTCGAG 58.009 47.619 0.00 0.00 0.00 4.04
1443 3012 7.041848 TGTGATTGAGAAATATCATAAGCACCG 60.042 37.037 0.00 0.00 38.32 4.94
1463 3032 0.623723 ATACAACCGCCCCTGTGATT 59.376 50.000 0.00 0.00 0.00 2.57
1476 3045 5.477510 TCACCATGATTTGCCAAATACAAC 58.522 37.500 1.95 0.00 0.00 3.32
1861 3463 7.730364 ATTACAACTTGACAAAGGTCTACTG 57.270 36.000 0.00 0.00 44.61 2.74
1900 3502 5.656416 TCAAGGGTAAATAAGGGCATTCAAG 59.344 40.000 0.00 0.00 0.00 3.02
1901 3503 5.584913 TCAAGGGTAAATAAGGGCATTCAA 58.415 37.500 0.00 0.00 0.00 2.69
1902 3504 5.199982 TCAAGGGTAAATAAGGGCATTCA 57.800 39.130 0.00 0.00 0.00 2.57
1903 3505 6.515832 CATTCAAGGGTAAATAAGGGCATTC 58.484 40.000 0.00 0.00 0.00 2.67
1904 3506 5.163311 GCATTCAAGGGTAAATAAGGGCATT 60.163 40.000 0.00 0.00 0.00 3.56
1905 3507 4.344968 GCATTCAAGGGTAAATAAGGGCAT 59.655 41.667 0.00 0.00 0.00 4.40
1906 3508 3.704061 GCATTCAAGGGTAAATAAGGGCA 59.296 43.478 0.00 0.00 0.00 5.36
1907 3509 3.069586 GGCATTCAAGGGTAAATAAGGGC 59.930 47.826 0.00 0.00 0.00 5.19
1908 3510 3.641436 GGGCATTCAAGGGTAAATAAGGG 59.359 47.826 0.00 0.00 0.00 3.95
1909 3511 4.546674 AGGGCATTCAAGGGTAAATAAGG 58.453 43.478 0.00 0.00 0.00 2.69
1910 3512 7.839680 ATAAGGGCATTCAAGGGTAAATAAG 57.160 36.000 0.00 0.00 0.00 1.73
1911 3513 8.616799 AAATAAGGGCATTCAAGGGTAAATAA 57.383 30.769 0.00 0.00 0.00 1.40
1912 3514 9.138596 GTAAATAAGGGCATTCAAGGGTAAATA 57.861 33.333 0.00 0.00 0.00 1.40
1913 3515 7.070696 GGTAAATAAGGGCATTCAAGGGTAAAT 59.929 37.037 0.00 0.00 0.00 1.40
1914 3516 6.381707 GGTAAATAAGGGCATTCAAGGGTAAA 59.618 38.462 0.00 0.00 0.00 2.01
1915 3517 5.894964 GGTAAATAAGGGCATTCAAGGGTAA 59.105 40.000 0.00 0.00 0.00 2.85
1916 3518 5.451354 GGTAAATAAGGGCATTCAAGGGTA 58.549 41.667 0.00 0.00 0.00 3.69
1917 3519 4.286707 GGTAAATAAGGGCATTCAAGGGT 58.713 43.478 0.00 0.00 0.00 4.34
1918 3520 3.641436 GGGTAAATAAGGGCATTCAAGGG 59.359 47.826 0.00 0.00 0.00 3.95
1919 3521 4.342092 CAGGGTAAATAAGGGCATTCAAGG 59.658 45.833 0.00 0.00 0.00 3.61
1965 3567 2.418197 CCACGATAACGGGTCTTGACAT 60.418 50.000 3.08 0.00 41.83 3.06
2019 3621 3.165875 CTCTGACCTAACCCTGTCTTCA 58.834 50.000 0.00 0.00 32.67 3.02
2139 3806 5.590663 AGCGATCTGTTAGATAAGAGTGACA 59.409 40.000 0.00 0.00 34.53 3.58
2168 4652 0.240145 TAGATAGCCGTCGCAATCCG 59.760 55.000 0.00 0.00 37.52 4.18
2197 4681 1.220477 GAGAGGTTGAGGGCAGAGC 59.780 63.158 0.00 0.00 0.00 4.09
2388 4874 3.380471 TGGTGTATAAGCCAAGGCATT 57.620 42.857 14.40 7.35 44.88 3.56
2401 4887 2.945008 CCGTGATGCTTGAATGGTGTAT 59.055 45.455 0.00 0.00 0.00 2.29
2403 4889 1.167851 CCGTGATGCTTGAATGGTGT 58.832 50.000 0.00 0.00 0.00 4.16
2429 6736 1.143305 CTCGCGATTTAGCCATCCAG 58.857 55.000 10.36 0.00 0.00 3.86
2487 6794 6.267928 TCTGCCTATAAGCTTTTCCCTAGTAG 59.732 42.308 3.20 0.00 0.00 2.57
2488 6795 6.141083 TCTGCCTATAAGCTTTTCCCTAGTA 58.859 40.000 3.20 0.00 0.00 1.82
2490 6797 5.552870 TCTGCCTATAAGCTTTTCCCTAG 57.447 43.478 3.20 0.00 0.00 3.02
2491 6798 5.746065 GCATCTGCCTATAAGCTTTTCCCTA 60.746 44.000 3.20 0.00 34.31 3.53
2493 6800 3.254411 GCATCTGCCTATAAGCTTTTCCC 59.746 47.826 3.20 0.00 34.31 3.97
2495 6802 5.764487 AAGCATCTGCCTATAAGCTTTTC 57.236 39.130 3.20 0.00 39.05 2.29
2496 6803 6.360618 AGTAAGCATCTGCCTATAAGCTTTT 58.639 36.000 3.20 0.00 41.87 2.27
2498 6805 5.559148 AGTAAGCATCTGCCTATAAGCTT 57.441 39.130 3.48 3.48 43.80 3.74
2500 6807 6.031751 ACTAGTAAGCATCTGCCTATAAGC 57.968 41.667 0.00 0.00 43.38 3.09
2501 6808 7.254852 GCTACTAGTAAGCATCTGCCTATAAG 58.745 42.308 15.29 0.00 43.38 1.73
2502 6809 6.127980 CGCTACTAGTAAGCATCTGCCTATAA 60.128 42.308 18.33 0.00 43.38 0.98
2503 6810 5.354513 CGCTACTAGTAAGCATCTGCCTATA 59.645 44.000 18.33 0.00 43.38 1.31
2504 6811 4.156922 CGCTACTAGTAAGCATCTGCCTAT 59.843 45.833 18.33 0.00 43.38 2.57
2505 6812 3.502595 CGCTACTAGTAAGCATCTGCCTA 59.497 47.826 18.33 0.00 43.38 3.93
2506 6813 2.294791 CGCTACTAGTAAGCATCTGCCT 59.705 50.000 18.33 0.00 43.38 4.75
2507 6814 2.667137 CGCTACTAGTAAGCATCTGCC 58.333 52.381 18.33 0.00 43.38 4.85
2509 6816 2.311462 CGCGCTACTAGTAAGCATCTG 58.689 52.381 22.19 8.59 0.00 2.90
2512 6819 0.314302 CCCGCGCTACTAGTAAGCAT 59.686 55.000 22.19 0.00 0.00 3.79
2513 6820 1.033746 ACCCGCGCTACTAGTAAGCA 61.034 55.000 22.19 0.00 0.00 3.91
2514 6821 0.101939 AACCCGCGCTACTAGTAAGC 59.898 55.000 16.04 16.04 0.00 3.09
2515 6822 2.573941 AAACCCGCGCTACTAGTAAG 57.426 50.000 5.56 2.60 0.00 2.34
2516 6823 4.023193 GGTATAAACCCGCGCTACTAGTAA 60.023 45.833 5.56 0.00 40.21 2.24
2518 6825 2.294512 GGTATAAACCCGCGCTACTAGT 59.705 50.000 5.56 0.00 40.21 2.57
2519 6826 2.938869 GGTATAAACCCGCGCTACTAG 58.061 52.381 5.56 0.00 40.21 2.57
2521 6828 3.974222 GGTATAAACCCGCGCTACT 57.026 52.632 5.56 0.00 40.21 2.57
2530 6837 2.547430 GCAGTAGCGAGGGGTATAAACC 60.547 54.545 0.00 0.00 45.97 3.27
2538 6845 8.638444 TACTAGTTAGTAGCAGTAGCGAGGGG 62.638 50.000 0.00 0.00 40.79 4.79
2541 6848 6.456447 CTACTAGTTAGTAGCAGTAGCGAG 57.544 45.833 12.09 0.00 46.31 5.03
2553 6860 3.828451 TGAAACCCACGCTACTAGTTAGT 59.172 43.478 0.00 0.00 40.24 2.24
2556 6863 3.036075 GTGAAACCCACGCTACTAGTT 57.964 47.619 0.00 0.00 35.86 2.24
2557 6864 2.738013 GTGAAACCCACGCTACTAGT 57.262 50.000 0.00 0.00 35.86 2.57
2570 6877 1.823610 AGTAGTAGCGAGGGGTGAAAC 59.176 52.381 0.00 0.00 0.00 2.78
2571 6878 2.226962 AGTAGTAGCGAGGGGTGAAA 57.773 50.000 0.00 0.00 0.00 2.69
2572 6879 3.285484 CTTAGTAGTAGCGAGGGGTGAA 58.715 50.000 0.00 0.00 0.00 3.18
2575 6882 3.022406 CAACTTAGTAGTAGCGAGGGGT 58.978 50.000 0.00 0.00 33.17 4.95
2576 6883 3.285484 TCAACTTAGTAGTAGCGAGGGG 58.715 50.000 0.00 0.00 33.17 4.79
2578 6885 6.864360 ACTATCAACTTAGTAGTAGCGAGG 57.136 41.667 0.00 0.00 33.17 4.63
2587 6894 6.484643 CCCACGCTACTACTATCAACTTAGTA 59.515 42.308 0.00 0.00 34.35 1.82
2589 6896 5.298777 ACCCACGCTACTACTATCAACTTAG 59.701 44.000 0.00 0.00 0.00 2.18
2590 6897 5.195940 ACCCACGCTACTACTATCAACTTA 58.804 41.667 0.00 0.00 0.00 2.24
2591 6898 4.021916 ACCCACGCTACTACTATCAACTT 58.978 43.478 0.00 0.00 0.00 2.66
2592 6899 3.629087 ACCCACGCTACTACTATCAACT 58.371 45.455 0.00 0.00 0.00 3.16
2593 6900 4.382345 AACCCACGCTACTACTATCAAC 57.618 45.455 0.00 0.00 0.00 3.18
2594 6901 5.410355 AAAACCCACGCTACTACTATCAA 57.590 39.130 0.00 0.00 0.00 2.57
2596 6903 6.256539 GGTTAAAAACCCACGCTACTACTATC 59.743 42.308 0.00 0.00 46.12 2.08
2597 6904 6.108687 GGTTAAAAACCCACGCTACTACTAT 58.891 40.000 0.00 0.00 46.12 2.12
2598 6905 5.478407 GGTTAAAAACCCACGCTACTACTA 58.522 41.667 0.00 0.00 46.12 1.82
2599 6906 4.318332 GGTTAAAAACCCACGCTACTACT 58.682 43.478 0.00 0.00 46.12 2.57
2600 6907 4.668576 GGTTAAAAACCCACGCTACTAC 57.331 45.455 0.00 0.00 46.12 2.73
2625 6932 0.741915 AGAGACCGCTTAGCAGTAGC 59.258 55.000 4.70 0.00 42.56 3.58
2627 6934 2.295885 GGTAGAGACCGCTTAGCAGTA 58.704 52.381 4.70 0.00 35.52 2.74
2628 6935 1.104630 GGTAGAGACCGCTTAGCAGT 58.895 55.000 4.70 0.00 35.52 4.40
2629 6936 3.949031 GGTAGAGACCGCTTAGCAG 57.051 57.895 4.70 0.00 35.52 4.24
2638 6945 2.682494 TGGGGCACGGTAGAGACC 60.682 66.667 0.00 0.00 43.03 3.85
2639 6946 1.668101 CTCTGGGGCACGGTAGAGAC 61.668 65.000 7.52 0.00 39.13 3.36
2640 6947 1.379977 CTCTGGGGCACGGTAGAGA 60.380 63.158 7.52 0.00 39.13 3.10
2641 6948 1.379977 TCTCTGGGGCACGGTAGAG 60.380 63.158 7.07 7.07 38.36 2.43
2642 6949 1.681327 GTCTCTGGGGCACGGTAGA 60.681 63.158 0.00 0.00 0.00 2.59
2643 6950 1.330655 ATGTCTCTGGGGCACGGTAG 61.331 60.000 0.00 0.00 0.00 3.18
2644 6951 1.305802 ATGTCTCTGGGGCACGGTA 60.306 57.895 0.00 0.00 0.00 4.02
2645 6952 2.607750 ATGTCTCTGGGGCACGGT 60.608 61.111 0.00 0.00 0.00 4.83
2646 6953 2.124983 CATGTCTCTGGGGCACGG 60.125 66.667 0.00 0.00 0.00 4.94
2647 6954 2.821366 GCATGTCTCTGGGGCACG 60.821 66.667 0.00 0.00 0.00 5.34
2648 6955 2.439156 GGCATGTCTCTGGGGCAC 60.439 66.667 0.00 0.00 0.00 5.01
2649 6956 0.987613 TATGGCATGTCTCTGGGGCA 60.988 55.000 10.98 0.00 40.23 5.36
2650 6957 0.250640 CTATGGCATGTCTCTGGGGC 60.251 60.000 10.98 0.00 0.00 5.80
2652 6959 2.968574 ACTACTATGGCATGTCTCTGGG 59.031 50.000 10.98 0.00 0.00 4.45
2653 6960 4.830046 ACTACTACTATGGCATGTCTCTGG 59.170 45.833 10.98 0.00 0.00 3.86
2654 6961 5.532779 TCACTACTACTATGGCATGTCTCTG 59.467 44.000 10.98 0.00 0.00 3.35
2655 6962 5.696030 TCACTACTACTATGGCATGTCTCT 58.304 41.667 10.98 0.00 0.00 3.10
2658 6965 4.021894 CCCTCACTACTACTATGGCATGTC 60.022 50.000 10.98 0.00 0.00 3.06
2659 6966 3.898123 CCCTCACTACTACTATGGCATGT 59.102 47.826 10.98 8.87 0.00 3.21
2661 6968 3.116707 ACCCCTCACTACTACTATGGCAT 60.117 47.826 4.88 4.88 0.00 4.40
2662 6969 2.246588 ACCCCTCACTACTACTATGGCA 59.753 50.000 0.00 0.00 0.00 4.92
2681 6988 3.646946 GCGCTACTACTGGGTTTATACC 58.353 50.000 0.00 0.00 44.22 2.73
2682 6989 3.303406 CGCGCTACTACTGGGTTTATAC 58.697 50.000 5.56 0.00 0.00 1.47
2683 6990 2.294233 CCGCGCTACTACTGGGTTTATA 59.706 50.000 5.56 0.00 0.00 0.98
2684 6991 1.068127 CCGCGCTACTACTGGGTTTAT 59.932 52.381 5.56 0.00 0.00 1.40
2685 6992 0.457035 CCGCGCTACTACTGGGTTTA 59.543 55.000 5.56 0.00 0.00 2.01
2686 6993 1.217244 CCGCGCTACTACTGGGTTT 59.783 57.895 5.56 0.00 0.00 3.27
2690 6997 2.282701 TAAAACCGCGCTACTACTGG 57.717 50.000 5.56 0.00 0.00 4.00
2691 6998 3.732721 GGTATAAAACCGCGCTACTACTG 59.267 47.826 5.56 0.00 38.88 2.74
2692 6999 3.969899 GGTATAAAACCGCGCTACTACT 58.030 45.455 5.56 0.00 38.88 2.57
2712 7869 2.805099 CGTACTTAGTAGTAGCGAGGGG 59.195 54.545 0.00 0.00 37.53 4.79
2713 7870 3.722147 TCGTACTTAGTAGTAGCGAGGG 58.278 50.000 0.00 0.00 37.53 4.30
2714 7871 4.970472 CTCGTACTTAGTAGTAGCGAGG 57.030 50.000 17.03 4.69 44.15 4.63
2715 7872 4.367450 ACCTCGTACTTAGTAGTAGCGAG 58.633 47.826 17.55 17.55 45.44 5.03
2716 7873 4.392921 ACCTCGTACTTAGTAGTAGCGA 57.607 45.455 0.00 0.00 37.53 4.93
2717 7874 4.683781 CCTACCTCGTACTTAGTAGTAGCG 59.316 50.000 9.62 3.36 37.53 4.26
2718 7875 5.465056 CACCTACCTCGTACTTAGTAGTAGC 59.535 48.000 9.62 0.00 37.53 3.58
2719 7876 6.810911 TCACCTACCTCGTACTTAGTAGTAG 58.189 44.000 8.62 8.62 37.53 2.57
2721 7878 5.683876 TCACCTACCTCGTACTTAGTAGT 57.316 43.478 0.00 0.00 38.44 2.73
2722 7879 6.112058 ACTTCACCTACCTCGTACTTAGTAG 58.888 44.000 0.00 6.23 33.50 2.57
2724 7881 4.916183 ACTTCACCTACCTCGTACTTAGT 58.084 43.478 0.00 0.00 0.00 2.24
2726 7883 5.183904 GGAAACTTCACCTACCTCGTACTTA 59.816 44.000 0.00 0.00 0.00 2.24
2729 7886 3.256631 TGGAAACTTCACCTACCTCGTAC 59.743 47.826 0.00 0.00 0.00 3.67
2731 7888 2.322658 TGGAAACTTCACCTACCTCGT 58.677 47.619 0.00 0.00 0.00 4.18
2732 7889 3.611766 ATGGAAACTTCACCTACCTCG 57.388 47.619 0.00 0.00 0.00 4.63
2733 7890 5.367060 AGGATATGGAAACTTCACCTACCTC 59.633 44.000 0.00 0.00 0.00 3.85
2734 7891 5.289510 AGGATATGGAAACTTCACCTACCT 58.710 41.667 0.00 0.00 0.00 3.08
2735 7892 5.612351 GAGGATATGGAAACTTCACCTACC 58.388 45.833 0.00 0.00 0.00 3.18
2737 7894 4.344102 CCGAGGATATGGAAACTTCACCTA 59.656 45.833 0.00 0.00 0.00 3.08
2738 7895 3.134804 CCGAGGATATGGAAACTTCACCT 59.865 47.826 0.00 0.00 0.00 4.00
2739 7896 3.467803 CCGAGGATATGGAAACTTCACC 58.532 50.000 0.00 0.00 0.00 4.02
2740 7897 2.872858 GCCGAGGATATGGAAACTTCAC 59.127 50.000 0.00 0.00 0.00 3.18
2742 7899 2.495084 GGCCGAGGATATGGAAACTTC 58.505 52.381 0.00 0.00 0.00 3.01
2744 7901 0.393077 CGGCCGAGGATATGGAAACT 59.607 55.000 24.07 0.00 0.00 2.66
2745 7902 0.391597 TCGGCCGAGGATATGGAAAC 59.608 55.000 27.28 0.00 0.00 2.78
2750 7907 0.108138 GGGATTCGGCCGAGGATATG 60.108 60.000 29.20 0.00 0.00 1.78
2751 7908 0.252284 AGGGATTCGGCCGAGGATAT 60.252 55.000 29.20 19.22 0.00 1.63
2752 7909 0.898789 GAGGGATTCGGCCGAGGATA 60.899 60.000 29.20 14.57 0.00 2.59
2753 7910 2.122813 AGGGATTCGGCCGAGGAT 60.123 61.111 29.20 20.45 0.00 3.24
2754 7911 2.838225 GAGGGATTCGGCCGAGGA 60.838 66.667 29.20 15.87 0.00 3.71
2755 7912 3.930012 GGAGGGATTCGGCCGAGG 61.930 72.222 29.20 0.00 0.00 4.63
2756 7913 2.840102 AGGAGGGATTCGGCCGAG 60.840 66.667 29.20 0.00 0.00 4.63
2757 7914 2.838225 GAGGAGGGATTCGGCCGA 60.838 66.667 27.28 27.28 0.00 5.54
2759 7916 1.458588 AGAGAGGAGGGATTCGGCC 60.459 63.158 0.00 0.00 0.00 6.13
2760 7917 1.468506 GGAGAGAGGAGGGATTCGGC 61.469 65.000 0.00 0.00 0.00 5.54
2761 7918 0.830023 GGGAGAGAGGAGGGATTCGG 60.830 65.000 0.00 0.00 0.00 4.30
2763 7920 1.219213 TGAGGGAGAGAGGAGGGATTC 59.781 57.143 0.00 0.00 0.00 2.52
2764 7921 1.062505 GTGAGGGAGAGAGGAGGGATT 60.063 57.143 0.00 0.00 0.00 3.01
2765 7922 0.560688 GTGAGGGAGAGAGGAGGGAT 59.439 60.000 0.00 0.00 0.00 3.85
2768 7925 0.106217 GGAGTGAGGGAGAGAGGAGG 60.106 65.000 0.00 0.00 0.00 4.30
2769 7926 0.106217 GGGAGTGAGGGAGAGAGGAG 60.106 65.000 0.00 0.00 0.00 3.69
2770 7927 1.585651 GGGGAGTGAGGGAGAGAGGA 61.586 65.000 0.00 0.00 0.00 3.71
2772 7929 1.075600 GGGGGAGTGAGGGAGAGAG 60.076 68.421 0.00 0.00 0.00 3.20
2773 7930 3.110552 GGGGGAGTGAGGGAGAGA 58.889 66.667 0.00 0.00 0.00 3.10
2788 7945 0.486879 AGAGCCTATGGAGAGAGGGG 59.513 60.000 0.00 0.00 30.39 4.79
2790 7947 1.428912 AGGAGAGCCTATGGAGAGAGG 59.571 57.143 0.00 0.00 44.74 3.69
2791 7948 2.978156 AGGAGAGCCTATGGAGAGAG 57.022 55.000 0.00 0.00 44.74 3.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.