Multiple sequence alignment - TraesCS3D01G444700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G444700 chr3D 100.000 2354 0 0 1 2354 553928341 553925988 0.000000e+00 4348.0
1 TraesCS3D01G444700 chr3D 94.340 53 3 0 1580 1632 603281229 603281177 5.390000e-12 82.4
2 TraesCS3D01G444700 chr3A 93.207 1531 89 8 1 1521 690461490 690459965 0.000000e+00 2237.0
3 TraesCS3D01G444700 chr3A 90.521 844 58 8 749 1577 690370900 690370064 0.000000e+00 1096.0
4 TraesCS3D01G444700 chr3A 90.891 516 40 5 749 1258 690397852 690397338 0.000000e+00 686.0
5 TraesCS3D01G444700 chr3A 88.630 343 24 6 1244 1577 690391082 690390746 1.010000e-108 403.0
6 TraesCS3D01G444700 chr3A 87.755 343 27 9 1244 1577 690418604 690418268 1.020000e-103 387.0
7 TraesCS3D01G444700 chr3A 89.474 247 19 5 749 989 690425084 690424839 2.940000e-79 305.0
8 TraesCS3D01G444700 chr3A 85.714 203 20 8 662 859 690461907 690461709 3.070000e-49 206.0
9 TraesCS3D01G444700 chr3B 87.659 1418 99 34 215 1580 735382494 735381101 0.000000e+00 1580.0
10 TraesCS3D01G444700 chr3B 90.233 645 42 7 842 1484 735200658 735200033 0.000000e+00 822.0
11 TraesCS3D01G444700 chr3B 86.000 200 21 5 666 859 735383288 735383090 8.530000e-50 207.0
12 TraesCS3D01G444700 chr3B 83.182 220 25 2 1 208 735382750 735382531 8.590000e-45 191.0
13 TraesCS3D01G444700 chr3B 93.333 45 3 0 2130 2174 52930878 52930834 1.510000e-07 67.6
14 TraesCS3D01G444700 chr3B 85.246 61 7 2 2126 2186 52860705 52860647 7.020000e-06 62.1
15 TraesCS3D01G444700 chr7A 95.395 456 20 1 1899 2354 497824491 497824037 0.000000e+00 725.0
16 TraesCS3D01G444700 chr7A 88.889 315 31 2 1584 1895 497833566 497833253 3.670000e-103 385.0
17 TraesCS3D01G444700 chr5A 89.048 420 45 1 1584 2003 653168911 653169329 9.640000e-144 520.0
18 TraesCS3D01G444700 chr5A 96.000 100 4 0 2255 2354 653169329 653169428 1.870000e-36 163.0
19 TraesCS3D01G444700 chr5A 74.233 326 67 10 216 524 44090859 44091184 1.140000e-23 121.0
20 TraesCS3D01G444700 chr5A 79.032 186 27 5 216 390 605660927 605660743 1.480000e-22 117.0
21 TraesCS3D01G444700 chr1B 80.734 327 44 11 216 524 94009560 94009235 1.090000e-58 237.0
22 TraesCS3D01G444700 chr1B 95.122 41 1 1 1581 1621 499214343 499214382 1.950000e-06 63.9
23 TraesCS3D01G444700 chr7D 79.941 339 46 12 216 535 508419378 508419713 1.820000e-56 230.0
24 TraesCS3D01G444700 chr5B 79.779 272 48 5 304 569 552747867 552748137 8.590000e-45 191.0
25 TraesCS3D01G444700 chr5B 76.758 327 52 16 216 524 57923203 57923523 6.730000e-36 161.0
26 TraesCS3D01G444700 chr5B 90.698 43 4 0 1577 1619 577298339 577298381 9.090000e-05 58.4
27 TraesCS3D01G444700 chr1D 77.301 326 55 11 217 524 13009312 13008988 8.650000e-40 174.0
28 TraesCS3D01G444700 chr5D 76.380 326 60 10 216 524 55059886 55060211 2.420000e-35 159.0
29 TraesCS3D01G444700 chr5D 97.727 44 1 0 1589 1632 208140845 208140802 2.510000e-10 76.8
30 TraesCS3D01G444700 chr4B 80.861 209 32 6 323 524 28230818 28230611 8.710000e-35 158.0
31 TraesCS3D01G444700 chr7B 77.586 290 44 6 216 490 733725913 733725630 3.130000e-34 156.0
32 TraesCS3D01G444700 chr1A 76.415 318 49 19 230 523 566043475 566043790 5.240000e-32 148.0
33 TraesCS3D01G444700 chr1A 76.806 263 52 5 301 555 592534813 592535074 3.150000e-29 139.0
34 TraesCS3D01G444700 chr4A 75.912 274 54 10 305 573 636374425 636374159 1.900000e-26 130.0
35 TraesCS3D01G444700 chr2A 93.478 46 2 1 1584 1629 644861040 644860996 1.510000e-07 67.6
36 TraesCS3D01G444700 chr2A 94.444 36 2 0 2119 2154 2606017 2605982 3.270000e-04 56.5
37 TraesCS3D01G444700 chr6B 89.796 49 5 0 1571 1619 157105833 157105785 1.950000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G444700 chr3D 553925988 553928341 2353 True 4348.000000 4348 100.000000 1 2354 1 chr3D.!!$R1 2353
1 TraesCS3D01G444700 chr3A 690459965 690461907 1942 True 1221.500000 2237 89.460500 1 1521 2 chr3A.!!$R6 1520
2 TraesCS3D01G444700 chr3A 690370064 690370900 836 True 1096.000000 1096 90.521000 749 1577 1 chr3A.!!$R1 828
3 TraesCS3D01G444700 chr3A 690397338 690397852 514 True 686.000000 686 90.891000 749 1258 1 chr3A.!!$R3 509
4 TraesCS3D01G444700 chr3B 735200033 735200658 625 True 822.000000 822 90.233000 842 1484 1 chr3B.!!$R3 642
5 TraesCS3D01G444700 chr3B 735381101 735383288 2187 True 659.333333 1580 85.613667 1 1580 3 chr3B.!!$R4 1579
6 TraesCS3D01G444700 chr5A 653168911 653169428 517 False 341.500000 520 92.524000 1584 2354 2 chr5A.!!$F2 770

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
139 684 0.038159 CCTATCGAAGCGGGGATGTC 60.038 60.0 0.0 0.0 0.0 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2057 2715 0.178967 TGCACTTGCCTCCAATTCCA 60.179 50.0 0.0 0.0 41.18 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 577 2.049433 CGACGTCTTGGCTTCGGT 60.049 61.111 14.70 0.00 0.00 4.69
126 671 2.484947 GGGTTTGGGAACTAGCCTATCG 60.485 54.545 0.00 0.00 36.71 2.92
139 684 0.038159 CCTATCGAAGCGGGGATGTC 60.038 60.000 0.00 0.00 0.00 3.06
140 685 0.673985 CTATCGAAGCGGGGATGTCA 59.326 55.000 0.00 0.00 0.00 3.58
150 695 1.077787 GGGATGTCATGGTGGCGAA 60.078 57.895 0.00 0.00 0.00 4.70
152 697 1.097547 GGATGTCATGGTGGCGAAGG 61.098 60.000 0.00 0.00 0.00 3.46
237 823 3.062639 GTGGTCTGCATTAACGACATCTG 59.937 47.826 5.52 0.00 0.00 2.90
285 871 0.331278 TTGGTGGAAGGCAGGTATGG 59.669 55.000 0.00 0.00 0.00 2.74
295 881 2.649816 AGGCAGGTATGGTTTTCTCCTT 59.350 45.455 0.00 0.00 0.00 3.36
326 912 4.141914 GGGGTGACAGATTTAGAGTTCGAT 60.142 45.833 0.00 0.00 0.00 3.59
335 921 4.471904 TTTAGAGTTCGATGGCATGTCT 57.528 40.909 3.81 1.56 0.00 3.41
385 971 0.881118 GACAATGGCTTCGGCTTTGA 59.119 50.000 18.31 0.00 42.70 2.69
398 984 2.783135 GGCTTTGATGAGTCACCTTGA 58.217 47.619 0.00 0.00 33.11 3.02
432 1020 1.239296 GCATCAGTGGTGAAGCTGCA 61.239 55.000 7.82 0.00 42.87 4.41
466 1058 4.836825 TGAGGAGGTGATCTGTCATTTTC 58.163 43.478 0.00 0.00 36.60 2.29
482 1074 6.146837 TGTCATTTTCTTTTGTGGTTGTTGTG 59.853 34.615 0.00 0.00 0.00 3.33
483 1075 6.367422 GTCATTTTCTTTTGTGGTTGTTGTGA 59.633 34.615 0.00 0.00 0.00 3.58
559 1154 9.581289 TGGTCTTGATTGTAATTTTCTTTCCTA 57.419 29.630 0.00 0.00 0.00 2.94
589 1197 5.295431 TGAATAAATTCAGAGCACCAACG 57.705 39.130 1.23 0.00 41.51 4.10
594 1202 2.031258 TTCAGAGCACCAACGTCAAA 57.969 45.000 0.00 0.00 0.00 2.69
608 1216 6.970613 ACCAACGTCAAATCTAAAACTTGAAC 59.029 34.615 0.00 0.00 31.21 3.18
819 1432 1.857602 GCCATCGAGACGTAACGTACC 60.858 57.143 12.26 0.00 41.37 3.34
829 1442 3.699067 ACGTAACGTACCTATCATGCAC 58.301 45.455 0.00 0.00 38.73 4.57
963 1584 1.679977 CACATCCAGGCCACCAAGG 60.680 63.158 5.01 0.00 41.84 3.61
997 1618 4.559153 CGATCACCATATCACACATAGCA 58.441 43.478 0.00 0.00 0.00 3.49
1490 2127 1.535462 GTCCACCTTGTGTATGTGTGC 59.465 52.381 0.00 0.00 0.00 4.57
1497 2134 3.062099 CCTTGTGTATGTGTGCGTATGTC 59.938 47.826 0.00 0.00 0.00 3.06
1540 2198 7.489574 TGTACGTGGTGTATTGACGTATATA 57.510 36.000 0.00 0.00 46.75 0.86
1580 2238 6.252655 GCGTGTCCATTGTGGTTAATTAATTC 59.747 38.462 3.39 0.00 39.03 2.17
1581 2239 6.467682 CGTGTCCATTGTGGTTAATTAATTCG 59.532 38.462 3.39 0.00 39.03 3.34
1582 2240 6.750039 GTGTCCATTGTGGTTAATTAATTCGG 59.250 38.462 3.39 0.00 39.03 4.30
1605 2263 6.035843 GGAATATGTATTTGGCAACTGTGTG 58.964 40.000 0.00 0.00 37.61 3.82
1644 2302 1.725169 TAACCACCTGGCTGCCCTTT 61.725 55.000 17.53 2.75 39.32 3.11
1658 2316 0.601311 CCCTTTGATCCCGATCGCTC 60.601 60.000 10.32 6.61 40.63 5.03
1672 2330 2.456119 CGCTCGATGCACAGGAACC 61.456 63.158 0.00 0.00 43.06 3.62
1675 2333 0.803768 CTCGATGCACAGGAACCTCG 60.804 60.000 0.00 0.00 0.00 4.63
1707 2365 5.333581 TCCATCCACGACCTCTGATAATAT 58.666 41.667 0.00 0.00 0.00 1.28
1709 2367 6.071334 TCCATCCACGACCTCTGATAATATTC 60.071 42.308 0.00 0.00 0.00 1.75
1711 2369 5.394738 TCCACGACCTCTGATAATATTCCT 58.605 41.667 0.00 0.00 0.00 3.36
1712 2370 5.243954 TCCACGACCTCTGATAATATTCCTG 59.756 44.000 0.00 0.00 0.00 3.86
1719 2377 5.642919 CCTCTGATAATATTCCTGCTGCTTC 59.357 44.000 0.00 0.00 0.00 3.86
1724 2382 2.645838 TATTCCTGCTGCTTCCCATC 57.354 50.000 0.00 0.00 0.00 3.51
1743 2401 3.826754 CTGCCGCGCTCTAGTGGA 61.827 66.667 5.56 0.00 44.18 4.02
1759 2417 2.593956 GGAAACCTCCTCGGGTGCT 61.594 63.158 0.00 0.00 39.85 4.40
1789 2447 2.733671 CTGACTGCGTCGCACCATG 61.734 63.158 17.58 9.35 34.95 3.66
1825 2483 0.537653 TCGTAATCATTCCACCGCCA 59.462 50.000 0.00 0.00 0.00 5.69
1826 2484 0.937304 CGTAATCATTCCACCGCCAG 59.063 55.000 0.00 0.00 0.00 4.85
1827 2485 0.663153 GTAATCATTCCACCGCCAGC 59.337 55.000 0.00 0.00 0.00 4.85
1835 2493 2.359850 CACCGCCAGCAGCCTTTA 60.360 61.111 0.00 0.00 38.78 1.85
1841 2499 1.308783 GCCAGCAGCCTTTACCTGTC 61.309 60.000 0.00 0.00 34.35 3.51
1857 2515 2.119611 TCCGGCTGTGGAGAGGAA 59.880 61.111 0.00 0.00 33.05 3.36
1860 2518 1.079543 CGGCTGTGGAGAGGAACAG 60.080 63.158 0.00 0.00 45.37 3.16
1864 2522 2.811317 GTGGAGAGGAACAGCGCG 60.811 66.667 0.00 0.00 0.00 6.86
1907 2565 2.357517 GTGCTCCGGTCCAGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
1908 2566 4.314440 TGCTCCGGTCCAGTGTGC 62.314 66.667 0.00 0.00 0.00 4.57
1961 2619 4.008933 GGCGTGCTCCAGTCCAGT 62.009 66.667 0.00 0.00 0.00 4.00
1974 2632 0.317938 GTCCAGTATGCGCCTAGTCG 60.318 60.000 4.18 0.00 31.97 4.18
2002 2660 0.248825 CCTCTTCTCTCGCGTGATGG 60.249 60.000 11.75 1.10 0.00 3.51
2003 2661 0.869454 CTCTTCTCTCGCGTGATGGC 60.869 60.000 11.75 0.00 0.00 4.40
2012 2670 3.190849 CGTGATGGCGTGCTCCAG 61.191 66.667 0.00 0.00 39.89 3.86
2013 2671 2.046892 GTGATGGCGTGCTCCAGT 60.047 61.111 0.00 0.00 39.89 4.00
2014 2672 2.103042 GTGATGGCGTGCTCCAGTC 61.103 63.158 0.00 0.00 39.89 3.51
2015 2673 2.512515 GATGGCGTGCTCCAGTCC 60.513 66.667 0.00 0.00 39.89 3.85
2016 2674 3.315142 GATGGCGTGCTCCAGTCCA 62.315 63.158 0.00 0.00 39.89 4.02
2017 2675 3.320879 ATGGCGTGCTCCAGTCCAG 62.321 63.158 0.00 0.00 39.89 3.86
2018 2676 4.008933 GGCGTGCTCCAGTCCAGT 62.009 66.667 0.00 0.00 0.00 4.00
2019 2677 2.031163 GCGTGCTCCAGTCCAGTT 59.969 61.111 0.00 0.00 0.00 3.16
2020 2678 2.029844 GCGTGCTCCAGTCCAGTTC 61.030 63.158 0.00 0.00 0.00 3.01
2021 2679 1.734477 CGTGCTCCAGTCCAGTTCG 60.734 63.158 0.00 0.00 0.00 3.95
2022 2680 2.029844 GTGCTCCAGTCCAGTTCGC 61.030 63.158 0.00 0.00 0.00 4.70
2023 2681 2.435059 GCTCCAGTCCAGTTCGCC 60.435 66.667 0.00 0.00 0.00 5.54
2024 2682 2.266055 CTCCAGTCCAGTTCGCCC 59.734 66.667 0.00 0.00 0.00 6.13
2025 2683 2.203788 TCCAGTCCAGTTCGCCCT 60.204 61.111 0.00 0.00 0.00 5.19
2026 2684 2.232298 CTCCAGTCCAGTTCGCCCTC 62.232 65.000 0.00 0.00 0.00 4.30
2027 2685 2.125912 CAGTCCAGTTCGCCCTCG 60.126 66.667 0.00 0.00 0.00 4.63
2028 2686 3.382832 AGTCCAGTTCGCCCTCGG 61.383 66.667 0.00 0.00 36.13 4.63
2048 2706 4.828925 GGCTGGCGTGCTCTCCTC 62.829 72.222 0.00 0.00 0.00 3.71
2049 2707 3.768922 GCTGGCGTGCTCTCCTCT 61.769 66.667 0.00 0.00 0.00 3.69
2050 2708 2.493973 CTGGCGTGCTCTCCTCTC 59.506 66.667 0.00 0.00 0.00 3.20
2051 2709 3.408501 CTGGCGTGCTCTCCTCTCG 62.409 68.421 0.00 0.00 0.00 4.04
2052 2710 4.863925 GGCGTGCTCTCCTCTCGC 62.864 72.222 0.00 0.00 44.95 5.03
2057 2715 3.959975 GCTCTCCTCTCGCGCGAT 61.960 66.667 34.86 0.00 0.00 4.58
2058 2716 2.051435 CTCTCCTCTCGCGCGATG 60.051 66.667 34.86 26.70 0.00 3.84
2059 2717 3.534970 CTCTCCTCTCGCGCGATGG 62.535 68.421 34.86 33.47 0.00 3.51
2060 2718 3.586961 CTCCTCTCGCGCGATGGA 61.587 66.667 35.55 35.55 0.00 3.41
2061 2719 3.126074 CTCCTCTCGCGCGATGGAA 62.126 63.158 36.37 26.11 0.00 3.53
2062 2720 2.028190 CCTCTCGCGCGATGGAAT 59.972 61.111 34.01 0.00 0.00 3.01
2063 2721 1.592669 CCTCTCGCGCGATGGAATT 60.593 57.895 34.01 0.00 0.00 2.17
2064 2722 1.561730 CTCTCGCGCGATGGAATTG 59.438 57.895 34.86 19.72 0.00 2.32
2065 2723 1.825285 CTCTCGCGCGATGGAATTGG 61.825 60.000 34.86 18.92 0.00 3.16
2066 2724 1.882625 CTCGCGCGATGGAATTGGA 60.883 57.895 34.86 6.65 0.00 3.53
2067 2725 1.825285 CTCGCGCGATGGAATTGGAG 61.825 60.000 34.86 13.69 0.00 3.86
2068 2726 2.885676 CGCGCGATGGAATTGGAGG 61.886 63.158 28.94 0.00 0.00 4.30
2069 2727 3.025619 CGCGATGGAATTGGAGGC 58.974 61.111 0.00 0.00 0.00 4.70
2070 2728 1.819208 CGCGATGGAATTGGAGGCA 60.819 57.895 0.00 0.00 0.00 4.75
2071 2729 1.375853 CGCGATGGAATTGGAGGCAA 61.376 55.000 0.00 0.00 0.00 4.52
2072 2730 0.383231 GCGATGGAATTGGAGGCAAG 59.617 55.000 0.00 0.00 0.00 4.01
2073 2731 1.755179 CGATGGAATTGGAGGCAAGT 58.245 50.000 0.00 0.00 0.00 3.16
2074 2732 1.402968 CGATGGAATTGGAGGCAAGTG 59.597 52.381 0.00 0.00 0.00 3.16
2075 2733 1.135721 GATGGAATTGGAGGCAAGTGC 59.864 52.381 0.00 0.00 41.14 4.40
2076 2734 0.178967 TGGAATTGGAGGCAAGTGCA 60.179 50.000 5.52 0.00 44.36 4.57
2077 2735 0.529378 GGAATTGGAGGCAAGTGCAG 59.471 55.000 5.52 0.00 44.36 4.41
2078 2736 1.251251 GAATTGGAGGCAAGTGCAGT 58.749 50.000 5.52 0.00 44.36 4.40
2079 2737 1.615392 GAATTGGAGGCAAGTGCAGTT 59.385 47.619 0.00 0.00 44.36 3.16
2080 2738 1.251251 ATTGGAGGCAAGTGCAGTTC 58.749 50.000 3.08 0.00 44.36 3.01
2081 2739 0.823356 TTGGAGGCAAGTGCAGTTCC 60.823 55.000 3.08 8.99 44.36 3.62
2082 2740 1.228245 GGAGGCAAGTGCAGTTCCA 60.228 57.895 18.87 0.00 44.36 3.53
2083 2741 1.239968 GGAGGCAAGTGCAGTTCCAG 61.240 60.000 18.87 5.84 44.36 3.86
2084 2742 1.860484 GAGGCAAGTGCAGTTCCAGC 61.860 60.000 18.87 13.53 44.36 4.85
2085 2743 2.195567 GGCAAGTGCAGTTCCAGCA 61.196 57.895 14.80 0.00 44.36 4.41
2090 2748 2.203337 TGCAGTTCCAGCACCCAC 60.203 61.111 0.00 0.00 37.02 4.61
2091 2749 2.985847 GCAGTTCCAGCACCCACC 60.986 66.667 0.00 0.00 0.00 4.61
2092 2750 2.515398 CAGTTCCAGCACCCACCA 59.485 61.111 0.00 0.00 0.00 4.17
2093 2751 1.898574 CAGTTCCAGCACCCACCAC 60.899 63.158 0.00 0.00 0.00 4.16
2094 2752 2.597510 GTTCCAGCACCCACCACC 60.598 66.667 0.00 0.00 0.00 4.61
2095 2753 3.099841 TTCCAGCACCCACCACCA 61.100 61.111 0.00 0.00 0.00 4.17
2096 2754 3.132029 TTCCAGCACCCACCACCAG 62.132 63.158 0.00 0.00 0.00 4.00
2097 2755 4.666253 CCAGCACCCACCACCAGG 62.666 72.222 0.00 0.00 42.21 4.45
2109 2767 1.813513 CCACCAGGTCAGTTCATGTC 58.186 55.000 0.00 0.00 0.00 3.06
2110 2768 1.611673 CCACCAGGTCAGTTCATGTCC 60.612 57.143 0.00 0.00 37.38 4.02
2111 2769 0.321671 ACCAGGTCAGTTCATGTCCG 59.678 55.000 0.00 0.00 41.50 4.79
2112 2770 1.021390 CCAGGTCAGTTCATGTCCGC 61.021 60.000 0.00 0.00 41.50 5.54
2113 2771 1.021390 CAGGTCAGTTCATGTCCGCC 61.021 60.000 0.00 0.00 41.50 6.13
2114 2772 1.194781 AGGTCAGTTCATGTCCGCCT 61.195 55.000 0.00 0.00 41.50 5.52
2115 2773 0.535335 GGTCAGTTCATGTCCGCCTA 59.465 55.000 0.00 0.00 0.00 3.93
2116 2774 1.641577 GTCAGTTCATGTCCGCCTAC 58.358 55.000 0.00 0.00 0.00 3.18
2117 2775 1.067142 GTCAGTTCATGTCCGCCTACA 60.067 52.381 0.00 0.00 0.00 2.74
2118 2776 1.831106 TCAGTTCATGTCCGCCTACAT 59.169 47.619 0.00 0.00 40.75 2.29
2122 2780 3.647367 ATGTCCGCCTACATGCCT 58.353 55.556 0.00 0.00 38.65 4.75
2123 2781 1.146930 ATGTCCGCCTACATGCCTG 59.853 57.895 0.00 0.00 38.65 4.85
2124 2782 2.897350 GTCCGCCTACATGCCTGC 60.897 66.667 0.00 0.00 0.00 4.85
2125 2783 4.529219 TCCGCCTACATGCCTGCG 62.529 66.667 14.26 14.26 46.14 5.18
2128 2786 3.275338 GCCTACATGCCTGCGAGC 61.275 66.667 0.00 0.00 0.00 5.03
2129 2787 2.503061 CCTACATGCCTGCGAGCT 59.497 61.111 0.00 0.00 0.00 4.09
2130 2788 1.886313 CCTACATGCCTGCGAGCTG 60.886 63.158 0.00 0.00 0.00 4.24
2131 2789 2.512286 TACATGCCTGCGAGCTGC 60.512 61.111 0.00 0.00 46.70 5.25
2132 2790 2.919960 CTACATGCCTGCGAGCTGCT 62.920 60.000 0.00 0.00 46.63 4.24
2133 2791 2.526450 TACATGCCTGCGAGCTGCTT 62.526 55.000 2.53 3.26 46.63 3.91
2134 2792 3.132139 ATGCCTGCGAGCTGCTTG 61.132 61.111 12.66 12.66 46.63 4.01
2135 2793 3.914579 ATGCCTGCGAGCTGCTTGT 62.915 57.895 17.76 0.00 46.63 3.16
2136 2794 4.099170 GCCTGCGAGCTGCTTGTG 62.099 66.667 17.76 10.96 46.63 3.33
2137 2795 2.667536 CCTGCGAGCTGCTTGTGT 60.668 61.111 17.76 0.00 46.63 3.72
2138 2796 2.256591 CCTGCGAGCTGCTTGTGTT 61.257 57.895 17.76 0.00 46.63 3.32
2139 2797 1.650912 CTGCGAGCTGCTTGTGTTT 59.349 52.632 17.76 0.00 46.63 2.83
2140 2798 0.867746 CTGCGAGCTGCTTGTGTTTA 59.132 50.000 17.76 0.45 46.63 2.01
2141 2799 1.466167 CTGCGAGCTGCTTGTGTTTAT 59.534 47.619 17.76 0.00 46.63 1.40
2142 2800 1.197492 TGCGAGCTGCTTGTGTTTATG 59.803 47.619 17.76 0.00 46.63 1.90
2143 2801 1.887320 CGAGCTGCTTGTGTTTATGC 58.113 50.000 2.53 0.00 0.00 3.14
2144 2802 1.466360 CGAGCTGCTTGTGTTTATGCC 60.466 52.381 2.53 0.00 0.00 4.40
2145 2803 1.541147 GAGCTGCTTGTGTTTATGCCA 59.459 47.619 2.53 0.00 0.00 4.92
2146 2804 1.962807 AGCTGCTTGTGTTTATGCCAA 59.037 42.857 0.00 0.00 0.00 4.52
2147 2805 2.564062 AGCTGCTTGTGTTTATGCCAAT 59.436 40.909 0.00 0.00 0.00 3.16
2148 2806 3.763360 AGCTGCTTGTGTTTATGCCAATA 59.237 39.130 0.00 0.00 0.00 1.90
2149 2807 4.403432 AGCTGCTTGTGTTTATGCCAATAT 59.597 37.500 0.00 0.00 0.00 1.28
2150 2808 4.505191 GCTGCTTGTGTTTATGCCAATATG 59.495 41.667 0.00 0.00 0.00 1.78
2151 2809 5.008619 TGCTTGTGTTTATGCCAATATGG 57.991 39.130 0.00 0.00 41.55 2.74
2152 2810 4.465660 TGCTTGTGTTTATGCCAATATGGT 59.534 37.500 0.00 0.00 40.46 3.55
2153 2811 5.046735 TGCTTGTGTTTATGCCAATATGGTT 60.047 36.000 0.00 0.00 40.46 3.67
2154 2812 5.874261 GCTTGTGTTTATGCCAATATGGTTT 59.126 36.000 0.00 0.00 40.46 3.27
2155 2813 6.371271 GCTTGTGTTTATGCCAATATGGTTTT 59.629 34.615 0.00 0.00 40.46 2.43
2156 2814 7.412891 GCTTGTGTTTATGCCAATATGGTTTTC 60.413 37.037 0.00 0.00 40.46 2.29
2157 2815 6.402222 TGTGTTTATGCCAATATGGTTTTCC 58.598 36.000 0.00 0.00 40.46 3.13
2158 2816 6.212388 TGTGTTTATGCCAATATGGTTTTCCT 59.788 34.615 0.00 0.00 40.46 3.36
2159 2817 7.102993 GTGTTTATGCCAATATGGTTTTCCTT 58.897 34.615 0.00 0.00 40.46 3.36
2160 2818 7.064490 GTGTTTATGCCAATATGGTTTTCCTTG 59.936 37.037 0.00 0.00 40.46 3.61
2161 2819 6.865834 TTATGCCAATATGGTTTTCCTTGT 57.134 33.333 0.00 0.00 40.46 3.16
2162 2820 5.760484 ATGCCAATATGGTTTTCCTTGTT 57.240 34.783 0.00 0.00 40.46 2.83
2163 2821 5.146010 TGCCAATATGGTTTTCCTTGTTC 57.854 39.130 0.00 0.00 40.46 3.18
2164 2822 4.590647 TGCCAATATGGTTTTCCTTGTTCA 59.409 37.500 0.00 0.00 40.46 3.18
2165 2823 4.929211 GCCAATATGGTTTTCCTTGTTCAC 59.071 41.667 0.00 0.00 40.46 3.18
2166 2824 5.478407 CCAATATGGTTTTCCTTGTTCACC 58.522 41.667 0.00 0.00 41.38 4.02
2167 2825 5.160641 CAATATGGTTTTCCTTGTTCACCG 58.839 41.667 0.00 0.00 41.38 4.94
2168 2826 2.421751 TGGTTTTCCTTGTTCACCGA 57.578 45.000 0.00 0.00 41.38 4.69
2169 2827 2.018515 TGGTTTTCCTTGTTCACCGAC 58.981 47.619 0.00 0.00 41.38 4.79
2170 2828 2.018515 GGTTTTCCTTGTTCACCGACA 58.981 47.619 0.00 0.00 36.94 4.35
2171 2829 2.032924 GGTTTTCCTTGTTCACCGACAG 59.967 50.000 0.00 0.00 36.94 3.51
2172 2830 1.305201 TTTCCTTGTTCACCGACAGC 58.695 50.000 0.00 0.00 0.00 4.40
2173 2831 0.534203 TTCCTTGTTCACCGACAGCC 60.534 55.000 0.00 0.00 0.00 4.85
2174 2832 1.071471 CCTTGTTCACCGACAGCCT 59.929 57.895 0.00 0.00 0.00 4.58
2175 2833 0.951040 CCTTGTTCACCGACAGCCTC 60.951 60.000 0.00 0.00 0.00 4.70
2176 2834 0.034059 CTTGTTCACCGACAGCCTCT 59.966 55.000 0.00 0.00 0.00 3.69
2177 2835 1.272490 CTTGTTCACCGACAGCCTCTA 59.728 52.381 0.00 0.00 0.00 2.43
2178 2836 0.888619 TGTTCACCGACAGCCTCTAG 59.111 55.000 0.00 0.00 0.00 2.43
2179 2837 0.889306 GTTCACCGACAGCCTCTAGT 59.111 55.000 0.00 0.00 0.00 2.57
2180 2838 0.888619 TTCACCGACAGCCTCTAGTG 59.111 55.000 0.00 0.00 0.00 2.74
2181 2839 0.965866 TCACCGACAGCCTCTAGTGG 60.966 60.000 6.47 6.47 0.00 4.00
2196 2854 6.821388 CCTCTAGTGGCAGTTTACATAATCT 58.179 40.000 0.00 0.00 0.00 2.40
2197 2855 6.703607 CCTCTAGTGGCAGTTTACATAATCTG 59.296 42.308 0.00 5.65 36.54 2.90
2198 2856 7.182817 TCTAGTGGCAGTTTACATAATCTGT 57.817 36.000 0.00 0.00 42.13 3.41
2199 2857 7.265673 TCTAGTGGCAGTTTACATAATCTGTC 58.734 38.462 0.00 7.18 39.39 3.51
2200 2858 5.186198 AGTGGCAGTTTACATAATCTGTCC 58.814 41.667 10.38 11.26 37.01 4.02
2201 2859 4.941263 GTGGCAGTTTACATAATCTGTCCA 59.059 41.667 14.91 14.91 37.01 4.02
2202 2860 4.941263 TGGCAGTTTACATAATCTGTCCAC 59.059 41.667 14.91 5.88 37.01 4.02
2203 2861 4.335594 GGCAGTTTACATAATCTGTCCACC 59.664 45.833 10.11 1.99 39.39 4.61
2204 2862 5.186198 GCAGTTTACATAATCTGTCCACCT 58.814 41.667 10.11 0.00 39.39 4.00
2205 2863 5.294552 GCAGTTTACATAATCTGTCCACCTC 59.705 44.000 10.11 0.00 39.39 3.85
2206 2864 5.817816 CAGTTTACATAATCTGTCCACCTCC 59.182 44.000 2.73 0.00 39.39 4.30
2207 2865 5.726793 AGTTTACATAATCTGTCCACCTCCT 59.273 40.000 0.00 0.00 39.39 3.69
2208 2866 5.871396 TTACATAATCTGTCCACCTCCTC 57.129 43.478 0.00 0.00 39.39 3.71
2209 2867 3.724478 ACATAATCTGTCCACCTCCTCA 58.276 45.455 0.00 0.00 29.94 3.86
2210 2868 4.302067 ACATAATCTGTCCACCTCCTCAT 58.698 43.478 0.00 0.00 29.94 2.90
2211 2869 4.346418 ACATAATCTGTCCACCTCCTCATC 59.654 45.833 0.00 0.00 29.94 2.92
2212 2870 1.407936 ATCTGTCCACCTCCTCATCG 58.592 55.000 0.00 0.00 0.00 3.84
2213 2871 0.039764 TCTGTCCACCTCCTCATCGT 59.960 55.000 0.00 0.00 0.00 3.73
2214 2872 0.898320 CTGTCCACCTCCTCATCGTT 59.102 55.000 0.00 0.00 0.00 3.85
2215 2873 1.276421 CTGTCCACCTCCTCATCGTTT 59.724 52.381 0.00 0.00 0.00 3.60
2216 2874 2.496070 CTGTCCACCTCCTCATCGTTTA 59.504 50.000 0.00 0.00 0.00 2.01
2217 2875 2.901192 TGTCCACCTCCTCATCGTTTAA 59.099 45.455 0.00 0.00 0.00 1.52
2218 2876 3.517901 TGTCCACCTCCTCATCGTTTAAT 59.482 43.478 0.00 0.00 0.00 1.40
2219 2877 3.871594 GTCCACCTCCTCATCGTTTAATG 59.128 47.826 0.00 0.00 0.00 1.90
2220 2878 2.614057 CCACCTCCTCATCGTTTAATGC 59.386 50.000 0.00 0.00 0.00 3.56
2221 2879 3.535561 CACCTCCTCATCGTTTAATGCT 58.464 45.455 0.00 0.00 0.00 3.79
2222 2880 3.557595 CACCTCCTCATCGTTTAATGCTC 59.442 47.826 0.00 0.00 0.00 4.26
2223 2881 3.197766 ACCTCCTCATCGTTTAATGCTCA 59.802 43.478 0.00 0.00 0.00 4.26
2224 2882 3.557595 CCTCCTCATCGTTTAATGCTCAC 59.442 47.826 0.00 0.00 0.00 3.51
2225 2883 3.531538 TCCTCATCGTTTAATGCTCACC 58.468 45.455 0.00 0.00 0.00 4.02
2226 2884 3.055458 TCCTCATCGTTTAATGCTCACCA 60.055 43.478 0.00 0.00 0.00 4.17
2227 2885 3.689161 CCTCATCGTTTAATGCTCACCAA 59.311 43.478 0.00 0.00 0.00 3.67
2228 2886 4.437390 CCTCATCGTTTAATGCTCACCAAC 60.437 45.833 0.00 0.00 0.00 3.77
2229 2887 4.323417 TCATCGTTTAATGCTCACCAACT 58.677 39.130 0.00 0.00 0.00 3.16
2230 2888 5.483811 TCATCGTTTAATGCTCACCAACTA 58.516 37.500 0.00 0.00 0.00 2.24
2231 2889 5.935206 TCATCGTTTAATGCTCACCAACTAA 59.065 36.000 0.00 0.00 0.00 2.24
2232 2890 5.600908 TCGTTTAATGCTCACCAACTAAC 57.399 39.130 0.00 0.00 0.00 2.34
2233 2891 4.453136 TCGTTTAATGCTCACCAACTAACC 59.547 41.667 0.00 0.00 0.00 2.85
2234 2892 4.379082 CGTTTAATGCTCACCAACTAACCC 60.379 45.833 0.00 0.00 0.00 4.11
2235 2893 2.969821 AATGCTCACCAACTAACCCA 57.030 45.000 0.00 0.00 0.00 4.51
2236 2894 2.200373 ATGCTCACCAACTAACCCAC 57.800 50.000 0.00 0.00 0.00 4.61
2237 2895 0.840617 TGCTCACCAACTAACCCACA 59.159 50.000 0.00 0.00 0.00 4.17
2238 2896 1.423541 TGCTCACCAACTAACCCACAT 59.576 47.619 0.00 0.00 0.00 3.21
2239 2897 2.158534 TGCTCACCAACTAACCCACATT 60.159 45.455 0.00 0.00 0.00 2.71
2240 2898 2.228822 GCTCACCAACTAACCCACATTG 59.771 50.000 0.00 0.00 0.00 2.82
2241 2899 3.750371 CTCACCAACTAACCCACATTGA 58.250 45.455 0.00 0.00 0.00 2.57
2242 2900 4.141287 CTCACCAACTAACCCACATTGAA 58.859 43.478 0.00 0.00 0.00 2.69
2243 2901 3.886505 TCACCAACTAACCCACATTGAAC 59.113 43.478 0.00 0.00 0.00 3.18
2244 2902 2.882137 ACCAACTAACCCACATTGAACG 59.118 45.455 0.00 0.00 0.00 3.95
2245 2903 3.142951 CCAACTAACCCACATTGAACGA 58.857 45.455 0.00 0.00 0.00 3.85
2246 2904 3.756434 CCAACTAACCCACATTGAACGAT 59.244 43.478 0.00 0.00 0.00 3.73
2247 2905 4.142687 CCAACTAACCCACATTGAACGATC 60.143 45.833 0.00 0.00 0.00 3.69
2248 2906 4.280436 ACTAACCCACATTGAACGATCA 57.720 40.909 0.00 0.00 0.00 2.92
2249 2907 4.000988 ACTAACCCACATTGAACGATCAC 58.999 43.478 0.00 0.00 34.61 3.06
2250 2908 2.559698 ACCCACATTGAACGATCACA 57.440 45.000 0.00 0.00 34.61 3.58
2251 2909 2.426522 ACCCACATTGAACGATCACAG 58.573 47.619 0.00 0.00 34.61 3.66
2252 2910 2.224523 ACCCACATTGAACGATCACAGT 60.225 45.455 0.00 0.00 34.61 3.55
2253 2911 2.416547 CCCACATTGAACGATCACAGTC 59.583 50.000 0.00 0.00 34.61 3.51
2274 2932 5.007430 AGTCGATGAATGAATGCATCTGAAC 59.993 40.000 0.00 5.39 38.93 3.18
2275 2933 4.877251 TCGATGAATGAATGCATCTGAACA 59.123 37.500 0.00 0.00 38.93 3.18
2304 2962 2.545526 CACACCACAAACTAGTGCAGAG 59.454 50.000 0.00 0.00 38.18 3.35
2317 2975 0.675837 TGCAGAGCAGAGCATCCAAC 60.676 55.000 0.00 0.00 35.51 3.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.200368 AGACGTCGAAAACCTAAAACCTA 57.800 39.130 10.46 0.00 0.00 3.08
2 3 4.521010 CAAGACGTCGAAAACCTAAAACC 58.479 43.478 10.46 0.00 0.00 3.27
3 4 4.521010 CCAAGACGTCGAAAACCTAAAAC 58.479 43.478 10.46 0.00 0.00 2.43
5 6 2.545106 GCCAAGACGTCGAAAACCTAAA 59.455 45.455 10.46 0.00 0.00 1.85
6 7 2.137523 GCCAAGACGTCGAAAACCTAA 58.862 47.619 10.46 0.00 0.00 2.69
8 9 0.106149 AGCCAAGACGTCGAAAACCT 59.894 50.000 10.46 0.43 0.00 3.50
10 11 1.396815 CGAAGCCAAGACGTCGAAAAC 60.397 52.381 10.46 0.11 42.97 2.43
126 671 1.097547 CACCATGACATCCCCGCTTC 61.098 60.000 0.00 0.00 0.00 3.86
139 684 2.484062 GGATGCCTTCGCCACCATG 61.484 63.158 0.00 0.00 31.94 3.66
140 685 2.124151 GGATGCCTTCGCCACCAT 60.124 61.111 0.00 0.00 31.94 3.55
150 695 3.329889 TCCGCCACAAGGATGCCT 61.330 61.111 0.00 0.00 36.89 4.75
152 697 1.675641 AAGTCCGCCACAAGGATGC 60.676 57.895 0.00 0.00 40.30 3.91
237 823 3.019564 CCCAAGACACAATCCATCTTCC 58.980 50.000 0.00 0.00 30.17 3.46
243 829 2.692557 CACAAACCCAAGACACAATCCA 59.307 45.455 0.00 0.00 0.00 3.41
253 839 0.463620 CCACCAACCACAAACCCAAG 59.536 55.000 0.00 0.00 0.00 3.61
315 901 4.038042 CCTAGACATGCCATCGAACTCTAA 59.962 45.833 0.00 0.00 0.00 2.10
326 912 0.322456 GCAACACCCTAGACATGCCA 60.322 55.000 0.00 0.00 0.00 4.92
353 939 5.705609 AGCCATTGTCGTTGAACTAATTT 57.294 34.783 0.00 0.00 0.00 1.82
385 971 3.584406 TGTGGATCTTCAAGGTGACTCAT 59.416 43.478 0.00 0.00 42.68 2.90
398 984 4.022589 CACTGATGCAGTTTTGTGGATCTT 60.023 41.667 6.87 0.00 42.59 2.40
432 1020 2.169352 CACCTCCTCATCGGAACTTGAT 59.831 50.000 0.00 0.00 42.53 2.57
466 1058 3.864583 CACCATCACAACAACCACAAAAG 59.135 43.478 0.00 0.00 0.00 2.27
482 1074 1.748122 CACCTGCCTCTGCACCATC 60.748 63.158 0.00 0.00 44.23 3.51
483 1075 1.569030 ATCACCTGCCTCTGCACCAT 61.569 55.000 0.00 0.00 44.23 3.55
559 1154 7.014038 GGTGCTCTGAATTTATTCATCAATCCT 59.986 37.037 5.68 0.00 44.92 3.24
589 1197 7.272037 TCAGGGTTCAAGTTTTAGATTTGAC 57.728 36.000 0.00 0.00 31.11 3.18
618 1226 9.715121 TGGTTAGAAGTACACTGGTATTTTTAG 57.285 33.333 0.00 0.00 30.53 1.85
621 1229 9.227777 GAATGGTTAGAAGTACACTGGTATTTT 57.772 33.333 0.00 0.00 30.53 1.82
623 1231 8.147244 AGAATGGTTAGAAGTACACTGGTATT 57.853 34.615 0.00 0.00 0.00 1.89
819 1432 0.812811 AGCGGTGCAGTGCATGATAG 60.813 55.000 22.87 11.84 41.91 2.08
963 1584 4.819761 TGATCGCTCGCTGGGTGC 62.820 66.667 8.50 8.50 38.57 5.01
1029 1650 1.669115 CTCCACCAGCTTCACCACG 60.669 63.158 0.00 0.00 0.00 4.94
1497 2134 9.469239 CACGTACATATACATACACACGTATAG 57.531 37.037 0.00 0.00 39.14 1.31
1540 2198 4.220602 TGGACACGCAGCATGTATATCTAT 59.779 41.667 0.00 0.00 39.31 1.98
1580 2238 5.163663 ACACAGTTGCCAAATACATATTCCG 60.164 40.000 0.00 0.00 0.00 4.30
1581 2239 6.035843 CACACAGTTGCCAAATACATATTCC 58.964 40.000 0.00 0.00 0.00 3.01
1582 2240 6.035843 CCACACAGTTGCCAAATACATATTC 58.964 40.000 0.00 0.00 0.00 1.75
1621 2279 1.377333 GCAGCCAGGTGGTTAGGTC 60.377 63.158 0.00 0.00 37.57 3.85
1644 2302 1.581447 CATCGAGCGATCGGGATCA 59.419 57.895 24.18 3.11 37.69 2.92
1658 2316 2.456119 GCGAGGTTCCTGTGCATCG 61.456 63.158 0.00 0.00 41.08 3.84
1672 2330 2.725008 GATGGAGGAGGTCGCGAG 59.275 66.667 10.24 0.00 0.00 5.03
1675 2333 2.501610 GTGGATGGAGGAGGTCGC 59.498 66.667 0.00 0.00 0.00 5.19
1707 2365 1.304282 GGATGGGAAGCAGCAGGAA 59.696 57.895 0.00 0.00 0.00 3.36
1709 2367 2.123982 GGGATGGGAAGCAGCAGG 60.124 66.667 0.00 0.00 0.00 4.85
1711 2369 2.679092 CAGGGATGGGAAGCAGCA 59.321 61.111 0.00 0.00 0.00 4.41
1712 2370 2.832201 GCAGGGATGGGAAGCAGC 60.832 66.667 0.00 0.00 0.00 5.25
1724 2382 4.880537 CACTAGAGCGCGGCAGGG 62.881 72.222 8.83 0.00 0.00 4.45
1733 2391 1.135333 CGAGGAGGTTTCCACTAGAGC 59.865 57.143 0.00 0.00 46.64 4.09
1743 2401 2.750350 CAGCACCCGAGGAGGTTT 59.250 61.111 0.00 0.00 38.39 3.27
1799 2457 1.136690 GGAATGATTACGATGCGCGA 58.863 50.000 12.10 0.00 44.57 5.87
1808 2466 0.663153 GCTGGCGGTGGAATGATTAC 59.337 55.000 0.00 0.00 0.00 1.89
1825 2483 1.296715 CGGACAGGTAAAGGCTGCT 59.703 57.895 0.00 0.00 0.00 4.24
1826 2484 1.745489 CCGGACAGGTAAAGGCTGC 60.745 63.158 0.00 0.00 34.51 5.25
1827 2485 1.745489 GCCGGACAGGTAAAGGCTG 60.745 63.158 5.05 0.00 44.06 4.85
1834 2492 1.982395 CTCCACAGCCGGACAGGTA 60.982 63.158 5.05 0.00 43.70 3.08
1835 2493 3.314331 CTCCACAGCCGGACAGGT 61.314 66.667 5.05 0.00 43.70 4.00
1841 2499 2.266055 GTTCCTCTCCACAGCCGG 59.734 66.667 0.00 0.00 0.00 6.13
1870 2528 2.352915 CATCGCGCGAGAGGACTC 60.353 66.667 36.99 0.00 39.54 3.36
1890 2548 2.357517 CACACTGGACCGGAGCAC 60.358 66.667 9.46 0.00 0.00 4.40
1941 2599 2.821366 GGACTGGAGCACGCCATG 60.821 66.667 0.00 0.00 37.30 3.66
1953 2611 0.747255 ACTAGGCGCATACTGGACTG 59.253 55.000 10.83 0.00 0.00 3.51
1961 2619 2.549198 CCGGACGACTAGGCGCATA 61.549 63.158 20.33 5.38 33.86 3.14
1974 2632 0.387565 GAGAGAAGAGGATGCCGGAC 59.612 60.000 5.05 0.00 0.00 4.79
2002 2660 2.029844 GAACTGGACTGGAGCACGC 61.030 63.158 0.00 0.00 0.00 5.34
2003 2661 1.734477 CGAACTGGACTGGAGCACG 60.734 63.158 0.00 0.00 0.00 5.34
2004 2662 2.029844 GCGAACTGGACTGGAGCAC 61.030 63.158 0.00 0.00 0.00 4.40
2005 2663 2.343758 GCGAACTGGACTGGAGCA 59.656 61.111 0.00 0.00 0.00 4.26
2006 2664 2.435059 GGCGAACTGGACTGGAGC 60.435 66.667 0.00 0.00 0.00 4.70
2007 2665 2.232298 GAGGGCGAACTGGACTGGAG 62.232 65.000 0.00 0.00 0.00 3.86
2008 2666 2.203788 AGGGCGAACTGGACTGGA 60.204 61.111 0.00 0.00 0.00 3.86
2009 2667 2.266055 GAGGGCGAACTGGACTGG 59.734 66.667 0.00 0.00 0.00 4.00
2010 2668 2.125912 CGAGGGCGAACTGGACTG 60.126 66.667 0.00 0.00 40.82 3.51
2011 2669 3.382832 CCGAGGGCGAACTGGACT 61.383 66.667 0.00 0.00 40.82 3.85
2031 2689 4.828925 GAGGAGAGCACGCCAGCC 62.829 72.222 6.70 0.00 38.45 4.85
2032 2690 3.714871 GAGAGGAGAGCACGCCAGC 62.715 68.421 6.70 0.00 38.45 4.85
2033 2691 2.493973 GAGAGGAGAGCACGCCAG 59.506 66.667 6.70 0.00 38.45 4.85
2034 2692 3.443925 CGAGAGGAGAGCACGCCA 61.444 66.667 6.70 0.00 38.45 5.69
2035 2693 4.863925 GCGAGAGGAGAGCACGCC 62.864 72.222 0.00 0.00 42.79 5.68
2040 2698 3.959975 ATCGCGCGAGAGGAGAGC 61.960 66.667 36.99 0.00 0.00 4.09
2041 2699 2.051435 CATCGCGCGAGAGGAGAG 60.051 66.667 36.99 16.26 0.00 3.20
2042 2700 3.586961 CCATCGCGCGAGAGGAGA 61.587 66.667 36.62 16.94 0.00 3.71
2043 2701 2.413437 ATTCCATCGCGCGAGAGGAG 62.413 60.000 37.94 25.51 34.98 3.69
2044 2702 2.016393 AATTCCATCGCGCGAGAGGA 62.016 55.000 37.54 37.54 32.71 3.71
2045 2703 1.592669 AATTCCATCGCGCGAGAGG 60.593 57.895 35.05 35.05 0.00 3.69
2046 2704 1.561730 CAATTCCATCGCGCGAGAG 59.438 57.895 36.99 29.46 0.00 3.20
2047 2705 1.882625 CCAATTCCATCGCGCGAGA 60.883 57.895 36.99 26.61 0.00 4.04
2048 2706 1.825285 CTCCAATTCCATCGCGCGAG 61.825 60.000 36.99 26.56 0.00 5.03
2049 2707 1.882625 CTCCAATTCCATCGCGCGA 60.883 57.895 36.65 36.65 0.00 5.87
2050 2708 2.628106 CTCCAATTCCATCGCGCG 59.372 61.111 26.76 26.76 0.00 6.86
2051 2709 3.025619 CCTCCAATTCCATCGCGC 58.974 61.111 0.00 0.00 0.00 6.86
2052 2710 1.375853 TTGCCTCCAATTCCATCGCG 61.376 55.000 0.00 0.00 0.00 5.87
2053 2711 0.383231 CTTGCCTCCAATTCCATCGC 59.617 55.000 0.00 0.00 0.00 4.58
2054 2712 1.402968 CACTTGCCTCCAATTCCATCG 59.597 52.381 0.00 0.00 0.00 3.84
2055 2713 1.135721 GCACTTGCCTCCAATTCCATC 59.864 52.381 0.00 0.00 34.31 3.51
2056 2714 1.188863 GCACTTGCCTCCAATTCCAT 58.811 50.000 0.00 0.00 34.31 3.41
2057 2715 0.178967 TGCACTTGCCTCCAATTCCA 60.179 50.000 0.00 0.00 41.18 3.53
2058 2716 0.529378 CTGCACTTGCCTCCAATTCC 59.471 55.000 0.00 0.00 41.18 3.01
2059 2717 1.251251 ACTGCACTTGCCTCCAATTC 58.749 50.000 0.00 0.00 41.18 2.17
2060 2718 1.615392 GAACTGCACTTGCCTCCAATT 59.385 47.619 0.00 0.00 41.18 2.32
2061 2719 1.251251 GAACTGCACTTGCCTCCAAT 58.749 50.000 0.00 0.00 41.18 3.16
2062 2720 0.823356 GGAACTGCACTTGCCTCCAA 60.823 55.000 0.00 0.00 41.18 3.53
2063 2721 1.228245 GGAACTGCACTTGCCTCCA 60.228 57.895 0.00 0.00 41.18 3.86
2064 2722 1.228245 TGGAACTGCACTTGCCTCC 60.228 57.895 0.00 3.27 41.18 4.30
2065 2723 2.251600 CTGGAACTGCACTTGCCTC 58.748 57.895 0.00 0.00 41.18 4.70
2066 2724 4.488790 CTGGAACTGCACTTGCCT 57.511 55.556 0.00 0.00 41.18 4.75
2075 2733 1.898574 GTGGTGGGTGCTGGAACTG 60.899 63.158 0.00 0.00 0.00 3.16
2076 2734 2.515901 GTGGTGGGTGCTGGAACT 59.484 61.111 0.00 0.00 0.00 3.01
2077 2735 2.597510 GGTGGTGGGTGCTGGAAC 60.598 66.667 0.00 0.00 0.00 3.62
2078 2736 3.099841 TGGTGGTGGGTGCTGGAA 61.100 61.111 0.00 0.00 0.00 3.53
2079 2737 3.569210 CTGGTGGTGGGTGCTGGA 61.569 66.667 0.00 0.00 0.00 3.86
2080 2738 4.666253 CCTGGTGGTGGGTGCTGG 62.666 72.222 0.00 0.00 0.00 4.85
2081 2739 3.889692 ACCTGGTGGTGGGTGCTG 61.890 66.667 0.00 0.00 46.51 4.41
2090 2748 1.611673 GGACATGAACTGACCTGGTGG 60.612 57.143 2.82 0.00 36.82 4.61
2091 2749 1.813513 GGACATGAACTGACCTGGTG 58.186 55.000 2.82 0.00 36.82 4.17
2092 2750 0.321671 CGGACATGAACTGACCTGGT 59.678 55.000 0.00 0.00 37.52 4.00
2093 2751 1.021390 GCGGACATGAACTGACCTGG 61.021 60.000 0.00 0.00 37.52 4.45
2094 2752 1.021390 GGCGGACATGAACTGACCTG 61.021 60.000 0.00 0.00 37.52 4.00
2095 2753 1.194781 AGGCGGACATGAACTGACCT 61.195 55.000 0.00 6.67 37.52 3.85
2096 2754 0.535335 TAGGCGGACATGAACTGACC 59.465 55.000 0.00 4.62 36.47 4.02
2097 2755 1.067142 TGTAGGCGGACATGAACTGAC 60.067 52.381 0.00 0.00 0.00 3.51
2098 2756 1.262417 TGTAGGCGGACATGAACTGA 58.738 50.000 0.00 0.00 0.00 3.41
2099 2757 2.315925 ATGTAGGCGGACATGAACTG 57.684 50.000 0.00 0.00 38.64 3.16
2111 2769 3.275338 GCTCGCAGGCATGTAGGC 61.275 66.667 0.00 0.00 44.61 3.93
2112 2770 1.886313 CAGCTCGCAGGCATGTAGG 60.886 63.158 0.00 0.00 34.17 3.18
2113 2771 2.532256 GCAGCTCGCAGGCATGTAG 61.532 63.158 0.00 0.00 41.79 2.74
2114 2772 2.512286 GCAGCTCGCAGGCATGTA 60.512 61.111 0.00 0.00 41.79 2.29
2115 2773 3.914579 AAGCAGCTCGCAGGCATGT 62.915 57.895 0.00 0.00 46.13 3.21
2116 2774 3.132139 AAGCAGCTCGCAGGCATG 61.132 61.111 0.00 0.00 46.13 4.06
2117 2775 3.132139 CAAGCAGCTCGCAGGCAT 61.132 61.111 0.00 0.00 46.13 4.40
2118 2776 4.631247 ACAAGCAGCTCGCAGGCA 62.631 61.111 0.00 0.00 46.13 4.75
2119 2777 4.099170 CACAAGCAGCTCGCAGGC 62.099 66.667 0.00 0.00 46.13 4.85
2120 2778 1.789078 AAACACAAGCAGCTCGCAGG 61.789 55.000 0.00 4.78 46.13 4.85
2121 2779 0.867746 TAAACACAAGCAGCTCGCAG 59.132 50.000 0.00 5.38 46.13 5.18
2122 2780 1.197492 CATAAACACAAGCAGCTCGCA 59.803 47.619 0.00 0.00 46.13 5.10
2123 2781 1.887320 CATAAACACAAGCAGCTCGC 58.113 50.000 0.00 0.47 42.91 5.03
2124 2782 1.466360 GGCATAAACACAAGCAGCTCG 60.466 52.381 0.00 0.00 0.00 5.03
2125 2783 1.541147 TGGCATAAACACAAGCAGCTC 59.459 47.619 0.00 0.00 0.00 4.09
2126 2784 1.619654 TGGCATAAACACAAGCAGCT 58.380 45.000 0.00 0.00 0.00 4.24
2127 2785 2.437200 TTGGCATAAACACAAGCAGC 57.563 45.000 0.00 0.00 0.00 5.25
2128 2786 5.045215 CCATATTGGCATAAACACAAGCAG 58.955 41.667 0.00 0.00 0.00 4.24
2129 2787 4.465660 ACCATATTGGCATAAACACAAGCA 59.534 37.500 0.00 0.00 42.67 3.91
2130 2788 5.009854 ACCATATTGGCATAAACACAAGC 57.990 39.130 0.00 0.00 42.67 4.01
2131 2789 7.064490 GGAAAACCATATTGGCATAAACACAAG 59.936 37.037 0.00 0.00 42.67 3.16
2132 2790 6.876257 GGAAAACCATATTGGCATAAACACAA 59.124 34.615 0.00 0.00 42.67 3.33
2133 2791 6.212388 AGGAAAACCATATTGGCATAAACACA 59.788 34.615 0.00 0.00 42.67 3.72
2134 2792 6.639563 AGGAAAACCATATTGGCATAAACAC 58.360 36.000 0.00 0.00 42.67 3.32
2135 2793 6.865834 AGGAAAACCATATTGGCATAAACA 57.134 33.333 0.00 0.00 42.67 2.83
2136 2794 7.102993 ACAAGGAAAACCATATTGGCATAAAC 58.897 34.615 0.00 0.00 42.67 2.01
2137 2795 7.251321 ACAAGGAAAACCATATTGGCATAAA 57.749 32.000 0.00 0.00 42.67 1.40
2138 2796 6.865834 ACAAGGAAAACCATATTGGCATAA 57.134 33.333 0.00 0.00 42.67 1.90
2139 2797 6.438741 TGAACAAGGAAAACCATATTGGCATA 59.561 34.615 0.00 0.00 42.67 3.14
2140 2798 5.248020 TGAACAAGGAAAACCATATTGGCAT 59.752 36.000 0.00 0.00 42.67 4.40
2141 2799 4.590647 TGAACAAGGAAAACCATATTGGCA 59.409 37.500 0.00 0.00 42.67 4.92
2142 2800 4.929211 GTGAACAAGGAAAACCATATTGGC 59.071 41.667 0.00 0.00 42.67 4.52
2143 2801 5.478407 GGTGAACAAGGAAAACCATATTGG 58.522 41.667 0.00 0.00 45.02 3.16
2144 2802 5.048364 TCGGTGAACAAGGAAAACCATATTG 60.048 40.000 0.00 0.00 0.00 1.90
2145 2803 5.048294 GTCGGTGAACAAGGAAAACCATATT 60.048 40.000 0.00 0.00 0.00 1.28
2146 2804 4.457949 GTCGGTGAACAAGGAAAACCATAT 59.542 41.667 0.00 0.00 0.00 1.78
2147 2805 3.816523 GTCGGTGAACAAGGAAAACCATA 59.183 43.478 0.00 0.00 0.00 2.74
2148 2806 2.621526 GTCGGTGAACAAGGAAAACCAT 59.378 45.455 0.00 0.00 0.00 3.55
2149 2807 2.018515 GTCGGTGAACAAGGAAAACCA 58.981 47.619 0.00 0.00 0.00 3.67
2150 2808 2.018515 TGTCGGTGAACAAGGAAAACC 58.981 47.619 0.00 0.00 0.00 3.27
2151 2809 2.540973 GCTGTCGGTGAACAAGGAAAAC 60.541 50.000 0.00 0.00 0.00 2.43
2152 2810 1.673920 GCTGTCGGTGAACAAGGAAAA 59.326 47.619 0.00 0.00 0.00 2.29
2153 2811 1.305201 GCTGTCGGTGAACAAGGAAA 58.695 50.000 0.00 0.00 0.00 3.13
2154 2812 0.534203 GGCTGTCGGTGAACAAGGAA 60.534 55.000 0.00 0.00 0.00 3.36
2155 2813 1.070786 GGCTGTCGGTGAACAAGGA 59.929 57.895 0.00 0.00 0.00 3.36
2156 2814 0.951040 GAGGCTGTCGGTGAACAAGG 60.951 60.000 0.00 0.00 0.00 3.61
2157 2815 0.034059 AGAGGCTGTCGGTGAACAAG 59.966 55.000 0.00 0.00 0.00 3.16
2158 2816 1.272490 CTAGAGGCTGTCGGTGAACAA 59.728 52.381 0.00 0.00 0.00 2.83
2159 2817 0.888619 CTAGAGGCTGTCGGTGAACA 59.111 55.000 0.00 0.00 0.00 3.18
2160 2818 0.889306 ACTAGAGGCTGTCGGTGAAC 59.111 55.000 0.00 0.00 0.00 3.18
2161 2819 0.888619 CACTAGAGGCTGTCGGTGAA 59.111 55.000 10.66 0.00 36.51 3.18
2162 2820 0.965866 CCACTAGAGGCTGTCGGTGA 60.966 60.000 15.64 0.00 36.51 4.02
2163 2821 1.513158 CCACTAGAGGCTGTCGGTG 59.487 63.158 0.00 0.79 35.17 4.94
2164 2822 4.019983 CCACTAGAGGCTGTCGGT 57.980 61.111 0.00 0.00 0.00 4.69
2172 2830 6.703607 CAGATTATGTAAACTGCCACTAGAGG 59.296 42.308 1.14 1.14 31.03 3.69
2173 2831 7.268586 ACAGATTATGTAAACTGCCACTAGAG 58.731 38.462 9.20 0.00 41.60 2.43
2174 2832 7.182817 ACAGATTATGTAAACTGCCACTAGA 57.817 36.000 9.20 0.00 41.60 2.43
2175 2833 6.480320 GGACAGATTATGTAAACTGCCACTAG 59.520 42.308 9.20 0.00 44.17 2.57
2176 2834 6.070481 TGGACAGATTATGTAAACTGCCACTA 60.070 38.462 15.31 4.60 44.17 2.74
2177 2835 5.186198 GGACAGATTATGTAAACTGCCACT 58.814 41.667 9.20 0.00 44.17 4.00
2178 2836 4.941263 TGGACAGATTATGTAAACTGCCAC 59.059 41.667 15.31 6.96 44.17 5.01
2179 2837 4.941263 GTGGACAGATTATGTAAACTGCCA 59.059 41.667 15.31 15.31 44.17 4.92
2180 2838 4.335594 GGTGGACAGATTATGTAAACTGCC 59.664 45.833 9.20 10.97 44.17 4.85
2181 2839 5.186198 AGGTGGACAGATTATGTAAACTGC 58.814 41.667 9.20 4.03 44.17 4.40
2182 2840 5.817816 GGAGGTGGACAGATTATGTAAACTG 59.182 44.000 8.07 8.07 44.17 3.16
2183 2841 5.726793 AGGAGGTGGACAGATTATGTAAACT 59.273 40.000 0.00 0.00 44.17 2.66
2184 2842 5.990668 AGGAGGTGGACAGATTATGTAAAC 58.009 41.667 0.00 0.00 44.17 2.01
2185 2843 5.724370 TGAGGAGGTGGACAGATTATGTAAA 59.276 40.000 0.00 0.00 44.17 2.01
2186 2844 5.277250 TGAGGAGGTGGACAGATTATGTAA 58.723 41.667 0.00 0.00 44.17 2.41
2187 2845 4.878968 TGAGGAGGTGGACAGATTATGTA 58.121 43.478 0.00 0.00 44.17 2.29
2189 2847 4.560311 CGATGAGGAGGTGGACAGATTATG 60.560 50.000 0.00 0.00 0.00 1.90
2190 2848 3.576118 CGATGAGGAGGTGGACAGATTAT 59.424 47.826 0.00 0.00 0.00 1.28
2191 2849 2.959030 CGATGAGGAGGTGGACAGATTA 59.041 50.000 0.00 0.00 0.00 1.75
2192 2850 1.759445 CGATGAGGAGGTGGACAGATT 59.241 52.381 0.00 0.00 0.00 2.40
2193 2851 1.342474 ACGATGAGGAGGTGGACAGAT 60.342 52.381 0.00 0.00 0.00 2.90
2194 2852 0.039764 ACGATGAGGAGGTGGACAGA 59.960 55.000 0.00 0.00 0.00 3.41
2195 2853 0.898320 AACGATGAGGAGGTGGACAG 59.102 55.000 0.00 0.00 0.00 3.51
2196 2854 1.348064 AAACGATGAGGAGGTGGACA 58.652 50.000 0.00 0.00 0.00 4.02
2197 2855 3.604875 TTAAACGATGAGGAGGTGGAC 57.395 47.619 0.00 0.00 0.00 4.02
2198 2856 3.681594 GCATTAAACGATGAGGAGGTGGA 60.682 47.826 0.00 0.00 0.00 4.02
2199 2857 2.614057 GCATTAAACGATGAGGAGGTGG 59.386 50.000 0.00 0.00 0.00 4.61
2200 2858 3.535561 AGCATTAAACGATGAGGAGGTG 58.464 45.455 0.00 0.00 0.00 4.00
2201 2859 3.197766 TGAGCATTAAACGATGAGGAGGT 59.802 43.478 0.00 0.00 0.00 3.85
2202 2860 3.557595 GTGAGCATTAAACGATGAGGAGG 59.442 47.826 0.00 0.00 0.00 4.30
2203 2861 3.557595 GGTGAGCATTAAACGATGAGGAG 59.442 47.826 0.00 0.00 0.00 3.69
2204 2862 3.055458 TGGTGAGCATTAAACGATGAGGA 60.055 43.478 0.00 0.00 0.00 3.71
2205 2863 3.270027 TGGTGAGCATTAAACGATGAGG 58.730 45.455 0.00 0.00 0.00 3.86
2206 2864 4.393062 AGTTGGTGAGCATTAAACGATGAG 59.607 41.667 0.00 0.00 0.00 2.90
2207 2865 4.323417 AGTTGGTGAGCATTAAACGATGA 58.677 39.130 0.00 0.00 0.00 2.92
2208 2866 4.685169 AGTTGGTGAGCATTAAACGATG 57.315 40.909 0.00 0.00 0.00 3.84
2209 2867 5.123344 GGTTAGTTGGTGAGCATTAAACGAT 59.877 40.000 0.00 0.00 0.00 3.73
2210 2868 4.453136 GGTTAGTTGGTGAGCATTAAACGA 59.547 41.667 0.00 0.00 0.00 3.85
2211 2869 4.379082 GGGTTAGTTGGTGAGCATTAAACG 60.379 45.833 0.00 0.00 0.00 3.60
2212 2870 4.521256 TGGGTTAGTTGGTGAGCATTAAAC 59.479 41.667 0.00 0.00 0.00 2.01
2213 2871 4.521256 GTGGGTTAGTTGGTGAGCATTAAA 59.479 41.667 0.00 0.00 0.00 1.52
2214 2872 4.076394 GTGGGTTAGTTGGTGAGCATTAA 58.924 43.478 0.00 0.00 0.00 1.40
2215 2873 3.073209 TGTGGGTTAGTTGGTGAGCATTA 59.927 43.478 0.00 0.00 0.00 1.90
2216 2874 2.158534 TGTGGGTTAGTTGGTGAGCATT 60.159 45.455 0.00 0.00 0.00 3.56
2217 2875 1.423541 TGTGGGTTAGTTGGTGAGCAT 59.576 47.619 0.00 0.00 0.00 3.79
2218 2876 0.840617 TGTGGGTTAGTTGGTGAGCA 59.159 50.000 0.00 0.00 0.00 4.26
2219 2877 2.200373 ATGTGGGTTAGTTGGTGAGC 57.800 50.000 0.00 0.00 0.00 4.26
2220 2878 3.750371 TCAATGTGGGTTAGTTGGTGAG 58.250 45.455 0.00 0.00 0.00 3.51
2221 2879 3.866703 TCAATGTGGGTTAGTTGGTGA 57.133 42.857 0.00 0.00 0.00 4.02
2222 2880 3.304391 CGTTCAATGTGGGTTAGTTGGTG 60.304 47.826 0.00 0.00 0.00 4.17
2223 2881 2.882137 CGTTCAATGTGGGTTAGTTGGT 59.118 45.455 0.00 0.00 0.00 3.67
2224 2882 3.142951 TCGTTCAATGTGGGTTAGTTGG 58.857 45.455 0.00 0.00 0.00 3.77
2225 2883 4.454161 TGATCGTTCAATGTGGGTTAGTTG 59.546 41.667 0.00 0.00 0.00 3.16
2226 2884 4.454504 GTGATCGTTCAATGTGGGTTAGTT 59.545 41.667 0.00 0.00 32.48 2.24
2227 2885 4.000988 GTGATCGTTCAATGTGGGTTAGT 58.999 43.478 0.00 0.00 32.48 2.24
2228 2886 4.000325 TGTGATCGTTCAATGTGGGTTAG 59.000 43.478 0.00 0.00 32.48 2.34
2229 2887 4.000325 CTGTGATCGTTCAATGTGGGTTA 59.000 43.478 0.00 0.00 32.48 2.85
2230 2888 2.813754 CTGTGATCGTTCAATGTGGGTT 59.186 45.455 0.00 0.00 32.48 4.11
2231 2889 2.224523 ACTGTGATCGTTCAATGTGGGT 60.225 45.455 0.00 0.00 32.48 4.51
2232 2890 2.416547 GACTGTGATCGTTCAATGTGGG 59.583 50.000 0.00 0.00 32.48 4.61
2233 2891 2.092681 CGACTGTGATCGTTCAATGTGG 59.907 50.000 0.00 0.00 37.33 4.17
2234 2892 2.986479 TCGACTGTGATCGTTCAATGTG 59.014 45.455 0.00 0.00 42.80 3.21
2235 2893 3.297830 TCGACTGTGATCGTTCAATGT 57.702 42.857 0.00 0.43 42.80 2.71
2236 2894 3.859386 TCATCGACTGTGATCGTTCAATG 59.141 43.478 0.00 0.00 42.80 2.82
2237 2895 4.110036 TCATCGACTGTGATCGTTCAAT 57.890 40.909 0.00 0.00 42.80 2.57
2238 2896 3.569250 TCATCGACTGTGATCGTTCAA 57.431 42.857 0.00 0.00 42.80 2.69
2239 2897 3.569250 TTCATCGACTGTGATCGTTCA 57.431 42.857 0.00 0.00 42.80 3.18
2240 2898 4.105486 TCATTCATCGACTGTGATCGTTC 58.895 43.478 0.00 0.00 42.80 3.95
2241 2899 4.110036 TCATTCATCGACTGTGATCGTT 57.890 40.909 0.00 0.00 42.80 3.85
2242 2900 3.782889 TCATTCATCGACTGTGATCGT 57.217 42.857 0.00 0.00 42.80 3.73
2243 2901 4.607778 GCATTCATTCATCGACTGTGATCG 60.608 45.833 0.00 0.00 43.63 3.69
2244 2902 4.271776 TGCATTCATTCATCGACTGTGATC 59.728 41.667 0.00 0.00 0.00 2.92
2245 2903 4.193865 TGCATTCATTCATCGACTGTGAT 58.806 39.130 0.00 0.00 0.00 3.06
2246 2904 3.598299 TGCATTCATTCATCGACTGTGA 58.402 40.909 0.00 0.00 0.00 3.58
2247 2905 4.272748 AGATGCATTCATTCATCGACTGTG 59.727 41.667 0.00 0.00 42.76 3.66
2248 2906 4.272748 CAGATGCATTCATTCATCGACTGT 59.727 41.667 0.00 0.00 42.76 3.55
2249 2907 4.510340 TCAGATGCATTCATTCATCGACTG 59.490 41.667 0.00 0.00 42.76 3.51
2250 2908 4.700700 TCAGATGCATTCATTCATCGACT 58.299 39.130 0.00 0.00 42.76 4.18
2251 2909 5.203370 GTTCAGATGCATTCATTCATCGAC 58.797 41.667 0.00 0.00 42.76 4.20
2252 2910 4.877251 TGTTCAGATGCATTCATTCATCGA 59.123 37.500 0.00 0.00 42.76 3.59
2253 2911 5.164606 TGTTCAGATGCATTCATTCATCG 57.835 39.130 0.00 0.00 42.76 3.84
2274 2932 1.039068 TTTGTGGTGTGGCTGGAATG 58.961 50.000 0.00 0.00 0.00 2.67
2275 2933 1.039856 GTTTGTGGTGTGGCTGGAAT 58.960 50.000 0.00 0.00 0.00 3.01
2304 2962 2.187599 AAACGCGTTGGATGCTCTGC 62.188 55.000 27.34 0.00 0.00 4.26
2317 2975 2.095919 CCAAACTAAAGGGAGAAACGCG 60.096 50.000 3.53 3.53 36.53 6.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.