Multiple sequence alignment - TraesCS3D01G439600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G439600 chr3D 100.000 2309 0 0 1647 3955 550199401 550197093 0.000000e+00 4265.0
1 TraesCS3D01G439600 chr3D 100.000 1478 0 0 1 1478 550201047 550199570 0.000000e+00 2730.0
2 TraesCS3D01G439600 chr3D 98.430 1083 14 1 1647 2726 580360703 580361785 0.000000e+00 1903.0
3 TraesCS3D01G439600 chr3D 97.969 1083 19 1 1647 2726 82425279 82426361 0.000000e+00 1875.0
4 TraesCS3D01G439600 chr3D 97.694 1084 18 4 1647 2726 609240 610320 0.000000e+00 1857.0
5 TraesCS3D01G439600 chr3D 95.480 1084 43 4 1647 2726 25150091 25149010 0.000000e+00 1725.0
6 TraesCS3D01G439600 chr3D 93.644 236 14 1 1243 1478 594586257 594586023 6.290000e-93 351.0
7 TraesCS3D01G439600 chr3D 86.939 245 23 1 1 236 550704879 550705123 2.340000e-67 267.0
8 TraesCS3D01G439600 chr3D 86.531 245 24 1 1 236 550700828 550701072 1.090000e-65 261.0
9 TraesCS3D01G439600 chr3D 86.638 232 23 6 2729 2957 550197744 550197518 2.360000e-62 250.0
10 TraesCS3D01G439600 chr3D 86.638 232 23 6 3304 3530 550198319 550198091 2.360000e-62 250.0
11 TraesCS3D01G439600 chr3D 81.739 115 17 4 3326 3438 612528425 612528537 4.210000e-15 93.5
12 TraesCS3D01G439600 chr3D 92.453 53 4 0 2750 2802 612528425 612528477 4.240000e-10 76.8
13 TraesCS3D01G439600 chr7D 98.615 1083 11 2 1647 2726 506885353 506886434 0.000000e+00 1914.0
14 TraesCS3D01G439600 chr7D 94.850 233 10 1 1246 1478 550002020 550001790 2.900000e-96 363.0
15 TraesCS3D01G439600 chr7D 88.500 200 17 5 3613 3808 449505606 449505409 1.840000e-58 237.0
16 TraesCS3D01G439600 chr4D 98.061 1083 18 1 1647 2726 330958561 330957479 0.000000e+00 1881.0
17 TraesCS3D01G439600 chr4D 98.729 236 3 0 1243 1478 330958860 330958625 1.700000e-113 420.0
18 TraesCS3D01G439600 chr4D 93.373 166 9 1 3646 3809 441903132 441902967 1.100000e-60 244.0
19 TraesCS3D01G439600 chr4D 83.838 99 16 0 635 733 95672235 95672137 1.170000e-15 95.3
20 TraesCS3D01G439600 chr6D 97.776 1079 17 4 1647 2721 457759316 457760391 0.000000e+00 1853.0
21 TraesCS3D01G439600 chr7B 95.023 1085 48 4 1647 2726 719489004 719490087 0.000000e+00 1700.0
22 TraesCS3D01G439600 chr7B 91.829 257 11 3 1232 1478 719488684 719488940 2.260000e-92 350.0
23 TraesCS3D01G439600 chr3B 94.737 1083 51 4 1649 2726 782654069 782652988 0.000000e+00 1679.0
24 TraesCS3D01G439600 chr3B 87.942 622 43 13 635 1235 729688333 729687723 0.000000e+00 704.0
25 TraesCS3D01G439600 chr3B 86.833 600 41 15 63 648 729688957 729688382 1.550000e-178 636.0
26 TraesCS3D01G439600 chr3B 99.308 289 2 0 3297 3585 729660835 729660547 1.260000e-144 523.0
27 TraesCS3D01G439600 chr3B 97.425 233 6 0 2725 2957 729687717 729687485 7.960000e-107 398.0
28 TraesCS3D01G439600 chr3B 86.364 242 26 5 3302 3538 729687716 729687477 1.410000e-64 257.0
29 TraesCS3D01G439600 chr3B 85.340 191 13 11 2973 3162 729687406 729687230 2.430000e-42 183.0
30 TraesCS3D01G439600 chr3B 87.037 162 6 7 3809 3955 729660412 729660251 6.800000e-38 169.0
31 TraesCS3D01G439600 chr3B 90.000 60 6 0 1 60 729694476 729694417 1.180000e-10 78.7
32 TraesCS3D01G439600 chr3A 99.308 289 2 0 3297 3585 686931424 686931136 1.260000e-144 523.0
33 TraesCS3D01G439600 chr3A 85.791 373 43 2 1 363 687026633 687026261 1.720000e-103 387.0
34 TraesCS3D01G439600 chr3A 94.850 233 12 0 2725 2957 686993211 686992979 8.080000e-97 364.0
35 TraesCS3D01G439600 chr3A 93.305 239 7 1 1006 1235 686993455 686993217 1.050000e-90 344.0
36 TraesCS3D01G439600 chr3A 91.286 241 14 2 1238 1478 120584550 120584317 4.930000e-84 322.0
37 TraesCS3D01G439600 chr3A 90.610 213 19 1 436 648 687010778 687010567 8.370000e-72 281.0
38 TraesCS3D01G439600 chr3A 85.547 256 31 5 3310 3562 686986019 686985767 3.030000e-66 263.0
39 TraesCS3D01G439600 chr3A 81.513 357 32 15 635 964 687010518 687010169 3.030000e-66 263.0
40 TraesCS3D01G439600 chr3A 81.935 310 46 6 3301 3601 686922694 686922386 1.820000e-63 254.0
41 TraesCS3D01G439600 chr3A 86.638 232 23 6 2729 2957 686931417 686931191 2.360000e-62 250.0
42 TraesCS3D01G439600 chr3A 90.710 183 11 5 3635 3812 616474140 616474321 5.110000e-59 239.0
43 TraesCS3D01G439600 chr3A 85.333 225 28 3 2734 2957 686986019 686985799 1.110000e-55 228.0
44 TraesCS3D01G439600 chr3A 96.850 127 3 1 3812 3937 686930951 686930825 1.110000e-50 211.0
45 TraesCS3D01G439600 chr3A 79.915 234 38 6 2729 2957 686922691 686922462 3.160000e-36 163.0
46 TraesCS3D01G439600 chr3A 84.940 166 11 10 765 924 686940427 686940270 5.290000e-34 156.0
47 TraesCS3D01G439600 chr3A 81.347 193 14 11 815 1001 686923178 686923002 1.920000e-28 137.0
48 TraesCS3D01G439600 chr3A 89.815 108 7 4 2972 3078 686992906 686992802 6.890000e-28 135.0
49 TraesCS3D01G439600 chr3A 83.333 102 15 2 3326 3426 747076123 747076023 4.210000e-15 93.5
50 TraesCS3D01G439600 chr3A 85.897 78 9 2 2750 2826 747076123 747076047 9.110000e-12 82.4
51 TraesCS3D01G439600 chr1D 92.946 241 14 3 1238 1478 19452964 19453201 8.130000e-92 348.0
52 TraesCS3D01G439600 chr7A 91.093 247 18 4 1232 1478 92089780 92089538 8.190000e-87 331.0
53 TraesCS3D01G439600 chrUn 90.588 255 11 4 1232 1478 231490455 231490704 3.810000e-85 326.0
54 TraesCS3D01G439600 chr2B 89.024 246 19 7 1232 1475 38210952 38211191 8.310000e-77 298.0
55 TraesCS3D01G439600 chr2B 93.491 169 9 1 3642 3808 93694577 93694745 2.360000e-62 250.0
56 TraesCS3D01G439600 chr2B 92.529 174 10 2 3646 3817 594834039 594833867 3.050000e-61 246.0
57 TraesCS3D01G439600 chr6B 93.939 165 8 1 3646 3808 536817880 536817716 8.490000e-62 248.0
58 TraesCS3D01G439600 chr6B 82.246 276 34 8 3302 3574 633363613 633363876 1.430000e-54 224.0
59 TraesCS3D01G439600 chr6B 77.778 225 37 9 2735 2957 633363622 633363835 4.150000e-25 126.0
60 TraesCS3D01G439600 chr5D 93.413 167 9 1 3644 3808 322384931 322385097 3.050000e-61 246.0
61 TraesCS3D01G439600 chr2D 92.442 172 11 1 3644 3813 5193116 5192945 1.100000e-60 244.0
62 TraesCS3D01G439600 chr5A 91.525 177 12 2 3635 3808 290391873 290391697 1.420000e-59 241.0
63 TraesCS3D01G439600 chr4B 83.333 90 14 1 635 724 171022380 171022468 9.110000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G439600 chr3D 550197093 550201047 3954 True 1873.75 4265 93.319000 1 3955 4 chr3D.!!$R3 3954
1 TraesCS3D01G439600 chr3D 580360703 580361785 1082 False 1903.00 1903 98.430000 1647 2726 1 chr3D.!!$F3 1079
2 TraesCS3D01G439600 chr3D 82425279 82426361 1082 False 1875.00 1875 97.969000 1647 2726 1 chr3D.!!$F2 1079
3 TraesCS3D01G439600 chr3D 609240 610320 1080 False 1857.00 1857 97.694000 1647 2726 1 chr3D.!!$F1 1079
4 TraesCS3D01G439600 chr3D 25149010 25150091 1081 True 1725.00 1725 95.480000 1647 2726 1 chr3D.!!$R1 1079
5 TraesCS3D01G439600 chr3D 550700828 550705123 4295 False 264.00 267 86.735000 1 236 2 chr3D.!!$F4 235
6 TraesCS3D01G439600 chr7D 506885353 506886434 1081 False 1914.00 1914 98.615000 1647 2726 1 chr7D.!!$F1 1079
7 TraesCS3D01G439600 chr4D 330957479 330958860 1381 True 1150.50 1881 98.395000 1243 2726 2 chr4D.!!$R3 1483
8 TraesCS3D01G439600 chr6D 457759316 457760391 1075 False 1853.00 1853 97.776000 1647 2721 1 chr6D.!!$F1 1074
9 TraesCS3D01G439600 chr7B 719488684 719490087 1403 False 1025.00 1700 93.426000 1232 2726 2 chr7B.!!$F1 1494
10 TraesCS3D01G439600 chr3B 782652988 782654069 1081 True 1679.00 1679 94.737000 1649 2726 1 chr3B.!!$R2 1077
11 TraesCS3D01G439600 chr3B 729687230 729688957 1727 True 435.60 704 88.780800 63 3538 5 chr3B.!!$R4 3475
12 TraesCS3D01G439600 chr3B 729660251 729660835 584 True 346.00 523 93.172500 3297 3955 2 chr3B.!!$R3 658
13 TraesCS3D01G439600 chr3A 686930825 686931424 599 True 328.00 523 94.265333 2729 3937 3 chr3A.!!$R5 1208
14 TraesCS3D01G439600 chr3A 686992802 686993455 653 True 281.00 364 92.656667 1006 3078 3 chr3A.!!$R7 2072
15 TraesCS3D01G439600 chr3A 687010169 687010778 609 True 272.00 281 86.061500 436 964 2 chr3A.!!$R8 528

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
323 334 0.107017 AGCCAAGATAAGCGCCACAT 60.107 50.0 2.29 0.0 0.00 3.21 F
385 396 0.174845 TCGAAACCCCAGCATCGTAG 59.825 55.0 0.00 0.0 36.70 3.51 F
2204 2714 0.820226 GCATCCTTTTGGCCTTCTCC 59.180 55.0 3.32 0.0 40.12 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2204 2714 0.597637 ACACAGACGCTGAAACCTCG 60.598 55.0 12.77 0.00 35.18 4.63 R
2513 3024 0.531200 AGCTAACCTACGAAAGCGCT 59.469 50.0 2.64 2.64 42.48 5.92 R
3260 3778 0.036388 GGCGTTCTTGTCATCCAGGA 60.036 55.0 0.00 0.00 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.687612 CCAACCACAGATGCCTCCT 59.312 57.895 0.00 0.00 0.00 3.69
20 21 0.679002 CCAACCACAGATGCCTCCTG 60.679 60.000 0.00 0.00 37.64 3.86
51 52 0.389426 AACACCGTACCTAGCTTGCG 60.389 55.000 0.00 0.00 0.00 4.85
53 54 1.076533 CACCGTACCTAGCTTGCGTG 61.077 60.000 0.00 0.00 0.00 5.34
69 70 5.673568 GCTTGCGTGTGAGCTTCATTATTAA 60.674 40.000 0.00 0.00 38.13 1.40
93 94 3.492656 GGCCCAAGGTTCAAAAGAGAAAC 60.493 47.826 0.00 0.00 35.44 2.78
99 100 7.363443 CCCAAGGTTCAAAAGAGAAACTACAAA 60.363 37.037 0.00 0.00 44.44 2.83
100 101 8.197439 CCAAGGTTCAAAAGAGAAACTACAAAT 58.803 33.333 0.00 0.00 44.44 2.32
133 134 8.749354 AGAAAGAGAAGTTTCTAAGATCTCTCC 58.251 37.037 0.00 1.15 44.47 3.71
136 137 7.836842 AGAGAAGTTTCTAAGATCTCTCCAAC 58.163 38.462 0.00 0.00 42.28 3.77
153 154 9.144298 TCTCTCCAACGATAATAAAATAGTCCT 57.856 33.333 0.00 0.00 0.00 3.85
156 157 9.765795 CTCCAACGATAATAAAATAGTCCTCTT 57.234 33.333 0.00 0.00 0.00 2.85
218 228 3.438216 TGGAGATGTTGCATTCCAAGA 57.562 42.857 0.00 0.00 36.81 3.02
262 272 5.357742 TCTCTACATGCAATTGCCTCTAA 57.642 39.130 26.94 8.96 41.18 2.10
266 276 2.420022 ACATGCAATTGCCTCTAACGTC 59.580 45.455 26.94 0.00 41.18 4.34
292 302 6.410388 GGAGGATAAACCATACCCTGAATGAA 60.410 42.308 0.00 0.00 42.04 2.57
302 312 3.843422 ACCCTGAATGAACAACATGGAA 58.157 40.909 0.00 0.00 39.39 3.53
323 334 0.107017 AGCCAAGATAAGCGCCACAT 60.107 50.000 2.29 0.00 0.00 3.21
340 351 1.824852 ACATGGTCTCGACATACAGCA 59.175 47.619 0.00 0.00 0.00 4.41
375 386 5.238650 CCACATTATGTTCTATCGAAACCCC 59.761 44.000 0.00 0.00 0.00 4.95
381 392 2.872858 GTTCTATCGAAACCCCAGCATC 59.127 50.000 0.00 0.00 0.00 3.91
383 394 0.828022 TATCGAAACCCCAGCATCGT 59.172 50.000 0.00 0.00 36.70 3.73
384 395 0.828022 ATCGAAACCCCAGCATCGTA 59.172 50.000 0.00 0.00 36.70 3.43
385 396 0.174845 TCGAAACCCCAGCATCGTAG 59.825 55.000 0.00 0.00 36.70 3.51
388 399 1.737793 GAAACCCCAGCATCGTAGTTG 59.262 52.381 0.00 0.00 0.00 3.16
389 400 0.981183 AACCCCAGCATCGTAGTTGA 59.019 50.000 0.00 0.00 0.00 3.18
390 401 1.204146 ACCCCAGCATCGTAGTTGAT 58.796 50.000 0.00 0.00 0.00 2.57
413 424 6.956202 TTTTTATGAAACCTTCAACCGGTA 57.044 33.333 8.00 0.00 43.95 4.02
432 444 4.378459 CGGTAGATCCACTTGAAACTTTGC 60.378 45.833 0.00 0.00 35.57 3.68
434 446 5.938125 GGTAGATCCACTTGAAACTTTGCTA 59.062 40.000 0.00 0.00 35.97 3.49
546 560 3.387374 TGGCATATGGGCTTTGGTTTATG 59.613 43.478 4.56 0.00 43.83 1.90
615 945 5.692204 AGTAACTGTCATTCTTGTCAACTCG 59.308 40.000 0.00 0.00 0.00 4.18
628 958 3.745975 TGTCAACTCGTCATGATTCAACC 59.254 43.478 0.00 0.00 0.00 3.77
677 1070 1.061411 CATCTCGCCATGTTGCACG 59.939 57.895 0.00 0.00 0.00 5.34
679 1072 3.725459 CTCGCCATGTTGCACGCA 61.725 61.111 0.00 0.00 0.00 5.24
706 1099 3.449018 GGCTGTGTCTCCTAGAATCTTGA 59.551 47.826 0.00 0.00 0.00 3.02
711 1104 2.035321 GTCTCCTAGAATCTTGAGCCCG 59.965 54.545 0.00 0.00 0.00 6.13
724 1117 2.158561 GAGCCCGGCAAGCAAAACAT 62.159 55.000 13.15 0.00 0.00 2.71
731 1124 3.319755 CGGCAAGCAAAACATTCTTCAT 58.680 40.909 0.00 0.00 0.00 2.57
736 1129 5.410439 GCAAGCAAAACATTCTTCATGGATT 59.590 36.000 0.00 0.00 37.17 3.01
737 1130 6.072893 GCAAGCAAAACATTCTTCATGGATTT 60.073 34.615 0.00 0.00 37.17 2.17
738 1131 7.520937 GCAAGCAAAACATTCTTCATGGATTTT 60.521 33.333 0.00 0.00 37.17 1.82
778 1186 4.720649 TCACGGATTCCAAACAAAACAA 57.279 36.364 3.09 0.00 0.00 2.83
824 1238 2.407340 ACAGAGGAAAGAGAGGTGGT 57.593 50.000 0.00 0.00 0.00 4.16
825 1239 2.695585 ACAGAGGAAAGAGAGGTGGTT 58.304 47.619 0.00 0.00 0.00 3.67
840 1254 2.747686 GTTCGGCCCAGTTGGAGA 59.252 61.111 0.00 0.00 37.39 3.71
874 1288 1.004918 CGGTGACTGAGTTGGGGTC 60.005 63.158 0.00 0.00 0.00 4.46
875 1289 1.375326 GGTGACTGAGTTGGGGTCC 59.625 63.158 0.00 0.00 0.00 4.46
876 1290 1.004918 GTGACTGAGTTGGGGTCCG 60.005 63.158 0.00 0.00 0.00 4.79
877 1291 1.152419 TGACTGAGTTGGGGTCCGA 60.152 57.895 0.00 0.00 0.00 4.55
878 1292 1.292541 GACTGAGTTGGGGTCCGAC 59.707 63.158 0.00 0.00 38.16 4.79
917 1331 2.059541 GTTTCGTTCCGTTCCTCTCTG 58.940 52.381 0.00 0.00 0.00 3.35
918 1332 1.325355 TTCGTTCCGTTCCTCTCTGT 58.675 50.000 0.00 0.00 0.00 3.41
944 1365 1.328439 ATAAATCGCGCGAGATCGAC 58.672 50.000 36.99 0.00 43.02 4.20
978 1399 1.611491 TCGATCAAAACCAGCAAACCC 59.389 47.619 0.00 0.00 0.00 4.11
2204 2714 0.820226 GCATCCTTTTGGCCTTCTCC 59.180 55.000 3.32 0.00 40.12 3.71
2513 3024 2.040606 GGTGGTGCCCTCCTCCTA 59.959 66.667 5.39 0.00 37.92 2.94
2689 3205 4.565022 CCGGTTGATGGCTTTGTTAATTT 58.435 39.130 0.00 0.00 0.00 1.82
2904 3422 2.096596 GCGGACTACAGCGAGTACT 58.903 57.895 0.00 0.00 0.00 2.73
2912 3430 3.808726 ACTACAGCGAGTACTATCTTCCG 59.191 47.826 0.00 0.00 0.00 4.30
2957 3475 1.402852 CGCTTGGTCGATCTGTGAAGA 60.403 52.381 0.00 0.00 0.00 2.87
2958 3476 2.736719 CGCTTGGTCGATCTGTGAAGAT 60.737 50.000 0.00 0.00 0.00 2.40
2959 3477 3.265791 GCTTGGTCGATCTGTGAAGATT 58.734 45.455 0.00 0.00 0.00 2.40
2960 3478 3.063180 GCTTGGTCGATCTGTGAAGATTG 59.937 47.826 0.00 0.00 0.00 2.67
2961 3479 4.498241 CTTGGTCGATCTGTGAAGATTGA 58.502 43.478 0.00 2.17 36.61 2.57
2962 3480 4.743057 TGGTCGATCTGTGAAGATTGAT 57.257 40.909 8.53 0.00 39.91 2.57
2963 3481 5.089970 TGGTCGATCTGTGAAGATTGATT 57.910 39.130 8.53 0.00 39.91 2.57
2964 3482 5.111989 TGGTCGATCTGTGAAGATTGATTC 58.888 41.667 8.53 5.92 39.91 2.52
2965 3483 4.208047 GGTCGATCTGTGAAGATTGATTCG 59.792 45.833 8.53 0.36 39.91 3.34
2966 3484 4.800993 GTCGATCTGTGAAGATTGATTCGT 59.199 41.667 8.53 0.00 39.91 3.85
2967 3485 5.037385 TCGATCTGTGAAGATTGATTCGTC 58.963 41.667 2.17 0.00 34.68 4.20
2968 3486 5.039984 CGATCTGTGAAGATTGATTCGTCT 58.960 41.667 0.00 0.00 34.34 4.18
2969 3487 5.051841 CGATCTGTGAAGATTGATTCGTCTG 60.052 44.000 0.00 0.00 34.34 3.51
2970 3488 5.139435 TCTGTGAAGATTGATTCGTCTGT 57.861 39.130 0.00 0.00 34.34 3.41
2971 3489 5.164233 TCTGTGAAGATTGATTCGTCTGTC 58.836 41.667 0.00 0.00 34.34 3.51
2972 3490 4.881920 TGTGAAGATTGATTCGTCTGTCA 58.118 39.130 0.00 0.00 34.34 3.58
2973 3491 5.482006 TGTGAAGATTGATTCGTCTGTCAT 58.518 37.500 0.00 0.00 34.34 3.06
2974 3492 6.630071 TGTGAAGATTGATTCGTCTGTCATA 58.370 36.000 0.00 0.00 34.34 2.15
2975 3493 7.267857 TGTGAAGATTGATTCGTCTGTCATAT 58.732 34.615 0.00 0.00 34.34 1.78
2976 3494 7.436376 TGTGAAGATTGATTCGTCTGTCATATC 59.564 37.037 0.00 0.00 34.34 1.63
2977 3495 7.651304 GTGAAGATTGATTCGTCTGTCATATCT 59.349 37.037 0.00 0.00 34.34 1.98
2978 3496 7.864882 TGAAGATTGATTCGTCTGTCATATCTC 59.135 37.037 0.00 0.00 34.34 2.75
2979 3497 7.523293 AGATTGATTCGTCTGTCATATCTCT 57.477 36.000 0.00 0.00 0.00 3.10
2980 3498 7.369607 AGATTGATTCGTCTGTCATATCTCTG 58.630 38.462 0.00 0.00 0.00 3.35
2981 3499 6.456795 TTGATTCGTCTGTCATATCTCTGT 57.543 37.500 0.00 0.00 0.00 3.41
2982 3500 6.066054 TGATTCGTCTGTCATATCTCTGTC 57.934 41.667 0.00 0.00 0.00 3.51
2983 3501 5.825151 TGATTCGTCTGTCATATCTCTGTCT 59.175 40.000 0.00 0.00 0.00 3.41
2984 3502 6.992715 TGATTCGTCTGTCATATCTCTGTCTA 59.007 38.462 0.00 0.00 0.00 2.59
2985 3503 7.663493 TGATTCGTCTGTCATATCTCTGTCTAT 59.337 37.037 0.00 0.00 0.00 1.98
2986 3504 7.428282 TTCGTCTGTCATATCTCTGTCTATC 57.572 40.000 0.00 0.00 0.00 2.08
2987 3505 6.764379 TCGTCTGTCATATCTCTGTCTATCT 58.236 40.000 0.00 0.00 0.00 1.98
2988 3506 7.897864 TCGTCTGTCATATCTCTGTCTATCTA 58.102 38.462 0.00 0.00 0.00 1.98
2989 3507 8.032451 TCGTCTGTCATATCTCTGTCTATCTAG 58.968 40.741 0.00 0.00 0.00 2.43
2990 3508 7.201522 CGTCTGTCATATCTCTGTCTATCTAGC 60.202 44.444 0.00 0.00 0.00 3.42
2991 3509 7.824289 GTCTGTCATATCTCTGTCTATCTAGCT 59.176 40.741 0.00 0.00 0.00 3.32
2992 3510 9.041354 TCTGTCATATCTCTGTCTATCTAGCTA 57.959 37.037 0.00 0.00 0.00 3.32
2993 3511 9.317936 CTGTCATATCTCTGTCTATCTAGCTAG 57.682 40.741 15.01 15.01 0.00 3.42
2994 3512 9.041354 TGTCATATCTCTGTCTATCTAGCTAGA 57.959 37.037 25.23 25.23 36.65 2.43
3030 3548 9.338622 AGTTACCATGCTAGTATTTAACAATCC 57.661 33.333 17.46 0.10 0.00 3.01
3031 3549 9.116067 GTTACCATGCTAGTATTTAACAATCCA 57.884 33.333 13.24 0.00 0.00 3.41
3032 3550 9.860650 TTACCATGCTAGTATTTAACAATCCAT 57.139 29.630 0.00 0.00 0.00 3.41
3033 3551 8.396272 ACCATGCTAGTATTTAACAATCCATC 57.604 34.615 0.00 0.00 0.00 3.51
3034 3552 7.998383 ACCATGCTAGTATTTAACAATCCATCA 59.002 33.333 0.00 0.00 0.00 3.07
3035 3553 9.017509 CCATGCTAGTATTTAACAATCCATCAT 57.982 33.333 0.00 0.00 0.00 2.45
3037 3555 8.621532 TGCTAGTATTTAACAATCCATCATCC 57.378 34.615 0.00 0.00 0.00 3.51
3038 3556 7.387673 TGCTAGTATTTAACAATCCATCATCCG 59.612 37.037 0.00 0.00 0.00 4.18
3039 3557 7.387948 GCTAGTATTTAACAATCCATCATCCGT 59.612 37.037 0.00 0.00 0.00 4.69
3040 3558 7.496529 AGTATTTAACAATCCATCATCCGTG 57.503 36.000 0.00 0.00 0.00 4.94
3041 3559 7.054124 AGTATTTAACAATCCATCATCCGTGT 58.946 34.615 0.00 0.00 0.00 4.49
3042 3560 8.208224 AGTATTTAACAATCCATCATCCGTGTA 58.792 33.333 0.00 0.00 0.00 2.90
3043 3561 8.999431 GTATTTAACAATCCATCATCCGTGTAT 58.001 33.333 0.00 0.00 0.00 2.29
3044 3562 7.490962 TTTAACAATCCATCATCCGTGTATC 57.509 36.000 0.00 0.00 0.00 2.24
3045 3563 4.963318 ACAATCCATCATCCGTGTATCT 57.037 40.909 0.00 0.00 0.00 1.98
3046 3564 6.419484 AACAATCCATCATCCGTGTATCTA 57.581 37.500 0.00 0.00 0.00 1.98
3047 3565 6.611613 ACAATCCATCATCCGTGTATCTAT 57.388 37.500 0.00 0.00 0.00 1.98
3048 3566 6.634805 ACAATCCATCATCCGTGTATCTATC 58.365 40.000 0.00 0.00 0.00 2.08
3049 3567 6.438741 ACAATCCATCATCCGTGTATCTATCT 59.561 38.462 0.00 0.00 0.00 1.98
3050 3568 7.615757 ACAATCCATCATCCGTGTATCTATCTA 59.384 37.037 0.00 0.00 0.00 1.98
3051 3569 8.637099 CAATCCATCATCCGTGTATCTATCTAT 58.363 37.037 0.00 0.00 0.00 1.98
3052 3570 7.573968 TCCATCATCCGTGTATCTATCTATG 57.426 40.000 0.00 0.00 0.00 2.23
3053 3571 7.119387 TCCATCATCCGTGTATCTATCTATGT 58.881 38.462 0.00 0.00 0.00 2.29
3054 3572 7.615757 TCCATCATCCGTGTATCTATCTATGTT 59.384 37.037 0.00 0.00 0.00 2.71
3055 3573 8.903820 CCATCATCCGTGTATCTATCTATGTTA 58.096 37.037 0.00 0.00 0.00 2.41
3056 3574 9.723447 CATCATCCGTGTATCTATCTATGTTAC 57.277 37.037 0.00 0.00 0.00 2.50
3057 3575 9.688091 ATCATCCGTGTATCTATCTATGTTACT 57.312 33.333 0.00 0.00 0.00 2.24
3058 3576 8.947115 TCATCCGTGTATCTATCTATGTTACTG 58.053 37.037 0.00 0.00 0.00 2.74
3059 3577 8.947115 CATCCGTGTATCTATCTATGTTACTGA 58.053 37.037 0.00 0.00 0.00 3.41
3060 3578 8.913487 TCCGTGTATCTATCTATGTTACTGAA 57.087 34.615 0.00 0.00 0.00 3.02
3061 3579 8.781196 TCCGTGTATCTATCTATGTTACTGAAC 58.219 37.037 0.00 0.00 36.00 3.18
3062 3580 8.021973 CCGTGTATCTATCTATGTTACTGAACC 58.978 40.741 0.00 0.00 34.38 3.62
3063 3581 8.565416 CGTGTATCTATCTATGTTACTGAACCA 58.435 37.037 0.00 0.00 34.38 3.67
3068 3586 7.952671 TCTATCTATGTTACTGAACCATCACC 58.047 38.462 0.00 0.00 34.38 4.02
3069 3587 6.814954 ATCTATGTTACTGAACCATCACCT 57.185 37.500 0.00 0.00 34.38 4.00
3070 3588 7.914427 ATCTATGTTACTGAACCATCACCTA 57.086 36.000 0.00 0.00 34.38 3.08
3071 3589 7.914427 TCTATGTTACTGAACCATCACCTAT 57.086 36.000 0.00 0.00 34.38 2.57
3072 3590 7.726216 TCTATGTTACTGAACCATCACCTATG 58.274 38.462 0.00 0.00 34.38 2.23
3073 3591 5.755409 TGTTACTGAACCATCACCTATGT 57.245 39.130 0.00 0.00 34.38 2.29
3074 3592 6.860790 TGTTACTGAACCATCACCTATGTA 57.139 37.500 0.00 0.00 34.38 2.29
3075 3593 7.432148 TGTTACTGAACCATCACCTATGTAT 57.568 36.000 0.00 0.00 34.38 2.29
3076 3594 7.497595 TGTTACTGAACCATCACCTATGTATC 58.502 38.462 0.00 0.00 34.38 2.24
3077 3595 7.344612 TGTTACTGAACCATCACCTATGTATCT 59.655 37.037 0.00 0.00 34.38 1.98
3078 3596 8.857098 GTTACTGAACCATCACCTATGTATCTA 58.143 37.037 0.00 0.00 33.34 1.98
3079 3597 7.914427 ACTGAACCATCACCTATGTATCTAA 57.086 36.000 0.00 0.00 33.34 2.10
3080 3598 7.957002 ACTGAACCATCACCTATGTATCTAAG 58.043 38.462 0.00 0.00 33.34 2.18
3081 3599 7.785028 ACTGAACCATCACCTATGTATCTAAGA 59.215 37.037 0.00 0.00 33.34 2.10
3082 3600 7.952671 TGAACCATCACCTATGTATCTAAGAC 58.047 38.462 0.00 0.00 33.34 3.01
3083 3601 7.563556 TGAACCATCACCTATGTATCTAAGACA 59.436 37.037 0.00 0.00 33.34 3.41
3084 3602 7.914427 ACCATCACCTATGTATCTAAGACAA 57.086 36.000 0.00 0.00 33.34 3.18
3085 3603 7.957002 ACCATCACCTATGTATCTAAGACAAG 58.043 38.462 0.00 0.00 33.34 3.16
3086 3604 7.565398 ACCATCACCTATGTATCTAAGACAAGT 59.435 37.037 0.00 0.00 33.34 3.16
3087 3605 8.424918 CCATCACCTATGTATCTAAGACAAGTT 58.575 37.037 0.00 0.00 33.34 2.66
3117 3635 6.359480 ACTCAAAAACTAAGTCGTCTTTGG 57.641 37.500 0.00 0.00 35.36 3.28
3118 3636 5.878669 ACTCAAAAACTAAGTCGTCTTTGGT 59.121 36.000 0.00 0.00 35.36 3.67
3119 3637 6.114221 TCAAAAACTAAGTCGTCTTTGGTG 57.886 37.500 0.00 0.00 35.36 4.17
3120 3638 5.875910 TCAAAAACTAAGTCGTCTTTGGTGA 59.124 36.000 0.00 0.30 35.36 4.02
3121 3639 6.540914 TCAAAAACTAAGTCGTCTTTGGTGAT 59.459 34.615 0.00 0.00 35.36 3.06
3122 3640 6.541111 AAAACTAAGTCGTCTTTGGTGATC 57.459 37.500 0.00 0.00 35.36 2.92
3123 3641 4.866508 ACTAAGTCGTCTTTGGTGATCA 57.133 40.909 0.00 0.00 35.36 2.92
3124 3642 5.209818 ACTAAGTCGTCTTTGGTGATCAA 57.790 39.130 0.00 0.00 35.36 2.57
3125 3643 5.794894 ACTAAGTCGTCTTTGGTGATCAAT 58.205 37.500 0.00 0.00 34.98 2.57
3126 3644 6.231211 ACTAAGTCGTCTTTGGTGATCAATT 58.769 36.000 0.00 0.00 34.98 2.32
3127 3645 5.613358 AAGTCGTCTTTGGTGATCAATTC 57.387 39.130 0.00 0.00 34.98 2.17
3128 3646 4.641396 AGTCGTCTTTGGTGATCAATTCA 58.359 39.130 0.00 0.00 34.98 2.57
3129 3647 5.063204 AGTCGTCTTTGGTGATCAATTCAA 58.937 37.500 0.00 0.00 35.70 2.69
3130 3648 5.707298 AGTCGTCTTTGGTGATCAATTCAAT 59.293 36.000 0.00 0.00 35.70 2.57
3131 3649 6.207417 AGTCGTCTTTGGTGATCAATTCAATT 59.793 34.615 0.00 0.00 35.70 2.32
3132 3650 6.306356 GTCGTCTTTGGTGATCAATTCAATTG 59.694 38.462 3.46 3.46 41.57 2.32
3146 3664 8.296211 TCAATTCAATTGATTCTCTATTGGCA 57.704 30.769 20.31 6.88 43.84 4.92
3147 3665 8.920174 TCAATTCAATTGATTCTCTATTGGCAT 58.080 29.630 20.31 2.66 43.84 4.40
3148 3666 8.978539 CAATTCAATTGATTCTCTATTGGCATG 58.021 33.333 9.40 0.00 42.83 4.06
3149 3667 7.649533 TTCAATTGATTCTCTATTGGCATGT 57.350 32.000 9.40 0.00 39.14 3.21
3150 3668 7.268199 TCAATTGATTCTCTATTGGCATGTC 57.732 36.000 3.38 0.00 39.14 3.06
3151 3669 6.829811 TCAATTGATTCTCTATTGGCATGTCA 59.170 34.615 3.38 0.00 39.14 3.58
3152 3670 7.339976 TCAATTGATTCTCTATTGGCATGTCAA 59.660 33.333 16.33 16.33 39.14 3.18
3153 3671 6.688637 TTGATTCTCTATTGGCATGTCAAG 57.311 37.500 18.95 5.74 0.00 3.02
3154 3672 5.748402 TGATTCTCTATTGGCATGTCAAGT 58.252 37.500 18.95 9.20 0.00 3.16
3155 3673 6.888105 TGATTCTCTATTGGCATGTCAAGTA 58.112 36.000 18.95 9.81 0.00 2.24
3156 3674 7.512130 TGATTCTCTATTGGCATGTCAAGTAT 58.488 34.615 18.95 4.33 0.00 2.12
3157 3675 8.650490 TGATTCTCTATTGGCATGTCAAGTATA 58.350 33.333 18.95 5.33 0.00 1.47
3158 3676 8.839310 ATTCTCTATTGGCATGTCAAGTATAC 57.161 34.615 18.95 0.00 0.00 1.47
3159 3677 7.360113 TCTCTATTGGCATGTCAAGTATACA 57.640 36.000 18.95 0.00 0.00 2.29
3160 3678 7.791029 TCTCTATTGGCATGTCAAGTATACAA 58.209 34.615 18.95 0.00 0.00 2.41
3161 3679 8.432013 TCTCTATTGGCATGTCAAGTATACAAT 58.568 33.333 18.95 1.26 0.00 2.71
3162 3680 8.382030 TCTATTGGCATGTCAAGTATACAATG 57.618 34.615 18.95 4.08 0.00 2.82
3163 3681 7.992608 TCTATTGGCATGTCAAGTATACAATGT 59.007 33.333 18.95 0.00 0.00 2.71
3164 3682 5.816449 TGGCATGTCAAGTATACAATGTG 57.184 39.130 0.00 0.00 0.00 3.21
3165 3683 5.252547 TGGCATGTCAAGTATACAATGTGT 58.747 37.500 0.00 0.00 0.00 3.72
3166 3684 5.123661 TGGCATGTCAAGTATACAATGTGTG 59.876 40.000 0.00 6.15 0.00 3.82
3167 3685 5.123820 GGCATGTCAAGTATACAATGTGTGT 59.876 40.000 5.50 0.00 44.82 3.72
3168 3686 6.349280 GGCATGTCAAGTATACAATGTGTGTT 60.349 38.462 5.50 0.00 41.98 3.32
3169 3687 7.083858 GCATGTCAAGTATACAATGTGTGTTT 58.916 34.615 5.50 0.00 41.98 2.83
3170 3688 7.060979 GCATGTCAAGTATACAATGTGTGTTTG 59.939 37.037 5.50 0.00 41.98 2.93
3171 3689 6.964908 TGTCAAGTATACAATGTGTGTTTGG 58.035 36.000 5.50 0.00 41.98 3.28
3172 3690 6.016693 TGTCAAGTATACAATGTGTGTTTGGG 60.017 38.462 5.50 0.00 41.98 4.12
3173 3691 5.048364 TCAAGTATACAATGTGTGTTTGGGC 60.048 40.000 5.50 0.00 41.98 5.36
3174 3692 4.662278 AGTATACAATGTGTGTTTGGGCT 58.338 39.130 5.50 0.00 41.98 5.19
3175 3693 4.700213 AGTATACAATGTGTGTTTGGGCTC 59.300 41.667 5.50 0.00 41.98 4.70
3176 3694 1.039856 ACAATGTGTGTTTGGGCTCC 58.960 50.000 0.00 0.00 37.01 4.70
3177 3695 1.331214 CAATGTGTGTTTGGGCTCCT 58.669 50.000 0.00 0.00 0.00 3.69
3178 3696 2.158534 ACAATGTGTGTTTGGGCTCCTA 60.159 45.455 0.00 0.00 37.01 2.94
3179 3697 2.890311 CAATGTGTGTTTGGGCTCCTAA 59.110 45.455 0.00 0.00 0.00 2.69
3180 3698 2.969821 TGTGTGTTTGGGCTCCTAAT 57.030 45.000 0.00 0.00 0.00 1.73
3181 3699 3.237268 TGTGTGTTTGGGCTCCTAATT 57.763 42.857 0.00 0.00 0.00 1.40
3182 3700 3.571590 TGTGTGTTTGGGCTCCTAATTT 58.428 40.909 0.00 0.00 0.00 1.82
3183 3701 4.730966 TGTGTGTTTGGGCTCCTAATTTA 58.269 39.130 0.00 0.00 0.00 1.40
3184 3702 4.764823 TGTGTGTTTGGGCTCCTAATTTAG 59.235 41.667 0.00 0.00 0.00 1.85
3185 3703 3.761752 TGTGTTTGGGCTCCTAATTTAGC 59.238 43.478 0.00 0.00 38.03 3.09
3193 3711 3.632333 GCTCCTAATTTAGCCCTTTGGT 58.368 45.455 0.00 0.00 32.40 3.67
3194 3712 4.788679 GCTCCTAATTTAGCCCTTTGGTA 58.211 43.478 0.00 0.00 32.40 3.25
3195 3713 5.386060 GCTCCTAATTTAGCCCTTTGGTAT 58.614 41.667 0.00 0.00 32.40 2.73
3196 3714 5.241728 GCTCCTAATTTAGCCCTTTGGTATG 59.758 44.000 0.00 0.00 32.40 2.39
3197 3715 6.335781 TCCTAATTTAGCCCTTTGGTATGT 57.664 37.500 0.00 0.00 0.00 2.29
3198 3716 6.737608 TCCTAATTTAGCCCTTTGGTATGTT 58.262 36.000 0.00 0.00 0.00 2.71
3199 3717 7.874252 TCCTAATTTAGCCCTTTGGTATGTTA 58.126 34.615 0.00 0.00 0.00 2.41
3200 3718 8.507761 TCCTAATTTAGCCCTTTGGTATGTTAT 58.492 33.333 0.00 0.00 0.00 1.89
3201 3719 9.802039 CCTAATTTAGCCCTTTGGTATGTTATA 57.198 33.333 0.00 0.00 0.00 0.98
3205 3723 8.880991 TTTAGCCCTTTGGTATGTTATAAACA 57.119 30.769 0.00 0.00 46.94 2.83
3206 3724 8.880991 TTAGCCCTTTGGTATGTTATAAACAA 57.119 30.769 0.00 0.00 45.86 2.83
3207 3725 7.165460 AGCCCTTTGGTATGTTATAAACAAC 57.835 36.000 0.00 0.00 45.86 3.32
3208 3726 6.722129 AGCCCTTTGGTATGTTATAAACAACA 59.278 34.615 0.00 0.00 45.86 3.33
3209 3727 7.233757 AGCCCTTTGGTATGTTATAAACAACAA 59.766 33.333 0.00 1.25 45.86 2.83
3210 3728 7.873505 GCCCTTTGGTATGTTATAAACAACAAA 59.126 33.333 14.31 14.31 45.86 2.83
3211 3729 9.936759 CCCTTTGGTATGTTATAAACAACAAAT 57.063 29.630 14.93 0.00 45.86 2.32
3226 3744 8.751302 AAACAACAAATTTTTCGTCTTGTAGT 57.249 26.923 0.00 0.00 31.90 2.73
3227 3745 7.734538 ACAACAAATTTTTCGTCTTGTAGTG 57.265 32.000 0.00 0.00 31.90 2.74
3228 3746 7.309920 ACAACAAATTTTTCGTCTTGTAGTGT 58.690 30.769 0.00 0.00 31.90 3.55
3229 3747 7.810759 ACAACAAATTTTTCGTCTTGTAGTGTT 59.189 29.630 0.00 0.00 31.90 3.32
3230 3748 8.643752 CAACAAATTTTTCGTCTTGTAGTGTTT 58.356 29.630 0.00 0.00 31.90 2.83
3231 3749 8.168681 ACAAATTTTTCGTCTTGTAGTGTTTG 57.831 30.769 0.00 0.00 30.41 2.93
3232 3750 8.024285 ACAAATTTTTCGTCTTGTAGTGTTTGA 58.976 29.630 0.00 0.00 30.41 2.69
3233 3751 8.855279 CAAATTTTTCGTCTTGTAGTGTTTGAA 58.145 29.630 0.00 0.00 0.00 2.69
3234 3752 8.973835 AATTTTTCGTCTTGTAGTGTTTGAAA 57.026 26.923 0.00 0.00 0.00 2.69
3235 3753 9.581099 AATTTTTCGTCTTGTAGTGTTTGAAAT 57.419 25.926 0.00 0.00 0.00 2.17
3238 3756 9.872757 TTTTCGTCTTGTAGTGTTTGAAATATC 57.127 29.630 0.00 0.00 0.00 1.63
3239 3757 8.827177 TTCGTCTTGTAGTGTTTGAAATATCT 57.173 30.769 0.00 0.00 0.00 1.98
3240 3758 8.827177 TCGTCTTGTAGTGTTTGAAATATCTT 57.173 30.769 0.00 0.00 0.00 2.40
3241 3759 8.708742 TCGTCTTGTAGTGTTTGAAATATCTTG 58.291 33.333 0.00 0.00 0.00 3.02
3242 3760 7.957484 CGTCTTGTAGTGTTTGAAATATCTTGG 59.043 37.037 0.00 0.00 0.00 3.61
3243 3761 8.784043 GTCTTGTAGTGTTTGAAATATCTTGGT 58.216 33.333 0.00 0.00 0.00 3.67
3244 3762 9.349713 TCTTGTAGTGTTTGAAATATCTTGGTT 57.650 29.630 0.00 0.00 0.00 3.67
3245 3763 9.398170 CTTGTAGTGTTTGAAATATCTTGGTTG 57.602 33.333 0.00 0.00 0.00 3.77
3246 3764 8.458573 TGTAGTGTTTGAAATATCTTGGTTGT 57.541 30.769 0.00 0.00 0.00 3.32
3247 3765 8.564574 TGTAGTGTTTGAAATATCTTGGTTGTC 58.435 33.333 0.00 0.00 0.00 3.18
3248 3766 7.581213 AGTGTTTGAAATATCTTGGTTGTCA 57.419 32.000 0.00 0.00 0.00 3.58
3249 3767 7.425606 AGTGTTTGAAATATCTTGGTTGTCAC 58.574 34.615 0.00 0.00 0.00 3.67
3250 3768 7.068103 AGTGTTTGAAATATCTTGGTTGTCACA 59.932 33.333 0.00 0.00 0.00 3.58
3251 3769 7.704472 GTGTTTGAAATATCTTGGTTGTCACAA 59.296 33.333 0.00 0.00 0.00 3.33
3252 3770 7.920151 TGTTTGAAATATCTTGGTTGTCACAAG 59.080 33.333 0.00 0.00 45.08 3.16
3258 3776 4.437682 TCTTGGTTGTCACAAGATCCTT 57.562 40.909 3.94 0.00 46.70 3.36
3259 3777 4.389374 TCTTGGTTGTCACAAGATCCTTC 58.611 43.478 3.94 0.00 46.70 3.46
3260 3778 4.103153 TCTTGGTTGTCACAAGATCCTTCT 59.897 41.667 3.94 0.00 46.70 2.85
3261 3779 4.008074 TGGTTGTCACAAGATCCTTCTC 57.992 45.455 0.00 0.00 0.00 2.87
3262 3780 3.244561 TGGTTGTCACAAGATCCTTCTCC 60.245 47.826 0.00 0.00 0.00 3.71
3263 3781 3.008485 GGTTGTCACAAGATCCTTCTCCT 59.992 47.826 0.00 0.00 0.00 3.69
3264 3782 3.969287 TGTCACAAGATCCTTCTCCTG 57.031 47.619 0.00 0.00 0.00 3.86
3265 3783 2.568956 TGTCACAAGATCCTTCTCCTGG 59.431 50.000 0.00 0.00 0.00 4.45
3266 3784 2.834549 GTCACAAGATCCTTCTCCTGGA 59.165 50.000 0.00 0.00 38.06 3.86
3267 3785 3.454082 GTCACAAGATCCTTCTCCTGGAT 59.546 47.826 0.00 0.00 46.05 3.41
3268 3786 3.453717 TCACAAGATCCTTCTCCTGGATG 59.546 47.826 0.00 0.00 43.68 3.51
3269 3787 3.453717 CACAAGATCCTTCTCCTGGATGA 59.546 47.826 0.00 0.00 43.68 2.92
3270 3788 3.454082 ACAAGATCCTTCTCCTGGATGAC 59.546 47.826 0.00 0.00 43.68 3.06
3271 3789 3.411454 AGATCCTTCTCCTGGATGACA 57.589 47.619 0.00 0.00 43.68 3.58
3272 3790 3.729108 AGATCCTTCTCCTGGATGACAA 58.271 45.455 0.00 0.00 43.68 3.18
3273 3791 3.710677 AGATCCTTCTCCTGGATGACAAG 59.289 47.826 0.00 0.00 43.68 3.16
3274 3792 3.190383 TCCTTCTCCTGGATGACAAGA 57.810 47.619 0.00 0.00 0.00 3.02
3275 3793 3.520696 TCCTTCTCCTGGATGACAAGAA 58.479 45.455 0.00 0.00 0.00 2.52
3276 3794 3.261897 TCCTTCTCCTGGATGACAAGAAC 59.738 47.826 0.00 0.00 0.00 3.01
3277 3795 3.257393 CTTCTCCTGGATGACAAGAACG 58.743 50.000 0.00 0.00 0.00 3.95
3278 3796 1.066858 TCTCCTGGATGACAAGAACGC 60.067 52.381 0.00 0.00 0.00 4.84
3279 3797 0.036388 TCCTGGATGACAAGAACGCC 60.036 55.000 0.00 0.00 0.00 5.68
3280 3798 0.321564 CCTGGATGACAAGAACGCCA 60.322 55.000 0.00 0.00 0.00 5.69
3281 3799 1.679944 CCTGGATGACAAGAACGCCAT 60.680 52.381 0.00 0.00 0.00 4.40
3282 3800 2.086869 CTGGATGACAAGAACGCCATT 58.913 47.619 0.00 0.00 0.00 3.16
3283 3801 2.083774 TGGATGACAAGAACGCCATTC 58.916 47.619 0.00 0.00 37.62 2.67
3284 3802 1.401905 GGATGACAAGAACGCCATTCC 59.598 52.381 0.00 0.00 38.16 3.01
3285 3803 2.359900 GATGACAAGAACGCCATTCCT 58.640 47.619 0.00 0.00 38.16 3.36
3286 3804 1.522668 TGACAAGAACGCCATTCCTG 58.477 50.000 0.00 0.00 38.16 3.86
3287 3805 0.169009 GACAAGAACGCCATTCCTGC 59.831 55.000 0.00 0.00 38.16 4.85
3288 3806 0.250901 ACAAGAACGCCATTCCTGCT 60.251 50.000 0.00 0.00 38.16 4.24
3289 3807 0.169672 CAAGAACGCCATTCCTGCTG 59.830 55.000 0.00 0.00 38.16 4.41
3290 3808 0.036732 AAGAACGCCATTCCTGCTGA 59.963 50.000 0.00 0.00 38.16 4.26
3291 3809 0.674895 AGAACGCCATTCCTGCTGAC 60.675 55.000 0.00 0.00 38.16 3.51
3292 3810 0.674895 GAACGCCATTCCTGCTGACT 60.675 55.000 0.00 0.00 0.00 3.41
3293 3811 0.250901 AACGCCATTCCTGCTGACTT 60.251 50.000 0.00 0.00 0.00 3.01
3294 3812 0.674895 ACGCCATTCCTGCTGACTTC 60.675 55.000 0.00 0.00 0.00 3.01
3295 3813 0.392193 CGCCATTCCTGCTGACTTCT 60.392 55.000 0.00 0.00 0.00 2.85
3296 3814 1.831580 GCCATTCCTGCTGACTTCTT 58.168 50.000 0.00 0.00 0.00 2.52
3297 3815 1.471684 GCCATTCCTGCTGACTTCTTG 59.528 52.381 0.00 0.00 0.00 3.02
3298 3816 2.877300 GCCATTCCTGCTGACTTCTTGA 60.877 50.000 0.00 0.00 0.00 3.02
3299 3817 3.618351 CCATTCCTGCTGACTTCTTGAT 58.382 45.455 0.00 0.00 0.00 2.57
3586 5080 2.701073 TTCGTCTTCGTCTGTCTTCC 57.299 50.000 0.00 0.00 38.33 3.46
3587 5081 1.601166 TCGTCTTCGTCTGTCTTCCA 58.399 50.000 0.00 0.00 38.33 3.53
3630 6508 6.509418 TTAAGTTGTCCATGCTATTGAACC 57.491 37.500 0.00 0.00 0.00 3.62
3632 6510 4.012374 AGTTGTCCATGCTATTGAACCAG 58.988 43.478 0.00 0.00 0.00 4.00
3641 6519 3.117776 TGCTATTGAACCAGCCATCATCT 60.118 43.478 0.00 0.00 36.95 2.90
3647 6525 4.960938 TGAACCAGCCATCATCTATGTAC 58.039 43.478 0.00 0.00 33.34 2.90
3649 6527 4.881019 ACCAGCCATCATCTATGTACTC 57.119 45.455 0.00 0.00 33.34 2.59
3651 6529 4.526262 ACCAGCCATCATCTATGTACTCTC 59.474 45.833 0.00 0.00 33.34 3.20
3655 6533 4.142491 GCCATCATCTATGTACTCTCTCCG 60.142 50.000 0.00 0.00 33.34 4.63
3656 6534 5.007034 CCATCATCTATGTACTCTCTCCGT 58.993 45.833 0.00 0.00 33.34 4.69
3657 6535 5.475220 CCATCATCTATGTACTCTCTCCGTT 59.525 44.000 0.00 0.00 33.34 4.44
3658 6536 6.348950 CCATCATCTATGTACTCTCTCCGTTC 60.349 46.154 0.00 0.00 33.34 3.95
3659 6537 5.064558 TCATCTATGTACTCTCTCCGTTCC 58.935 45.833 0.00 0.00 0.00 3.62
3660 6538 4.774660 TCTATGTACTCTCTCCGTTCCT 57.225 45.455 0.00 0.00 0.00 3.36
3661 6539 5.883685 TCTATGTACTCTCTCCGTTCCTA 57.116 43.478 0.00 0.00 0.00 2.94
3662 6540 6.244552 TCTATGTACTCTCTCCGTTCCTAA 57.755 41.667 0.00 0.00 0.00 2.69
3663 6541 6.656902 TCTATGTACTCTCTCCGTTCCTAAA 58.343 40.000 0.00 0.00 0.00 1.85
3664 6542 7.288560 TCTATGTACTCTCTCCGTTCCTAAAT 58.711 38.462 0.00 0.00 0.00 1.40
3665 6543 8.435187 TCTATGTACTCTCTCCGTTCCTAAATA 58.565 37.037 0.00 0.00 0.00 1.40
3666 6544 9.233649 CTATGTACTCTCTCCGTTCCTAAATAT 57.766 37.037 0.00 0.00 0.00 1.28
3667 6545 7.893124 TGTACTCTCTCCGTTCCTAAATATT 57.107 36.000 0.00 0.00 0.00 1.28
3668 6546 8.302515 TGTACTCTCTCCGTTCCTAAATATTT 57.697 34.615 5.89 5.89 0.00 1.40
3669 6547 8.195436 TGTACTCTCTCCGTTCCTAAATATTTG 58.805 37.037 11.05 1.40 0.00 2.32
3670 6548 7.419711 ACTCTCTCCGTTCCTAAATATTTGA 57.580 36.000 11.05 0.00 0.00 2.69
3671 6549 7.266400 ACTCTCTCCGTTCCTAAATATTTGAC 58.734 38.462 11.05 3.92 0.00 3.18
3672 6550 7.124448 ACTCTCTCCGTTCCTAAATATTTGACT 59.876 37.037 11.05 0.00 0.00 3.41
3673 6551 7.848128 TCTCTCCGTTCCTAAATATTTGACTT 58.152 34.615 11.05 0.00 0.00 3.01
3674 6552 8.319146 TCTCTCCGTTCCTAAATATTTGACTTT 58.681 33.333 11.05 0.00 0.00 2.66
3675 6553 8.857694 TCTCCGTTCCTAAATATTTGACTTTT 57.142 30.769 11.05 0.00 0.00 2.27
3676 6554 9.292195 TCTCCGTTCCTAAATATTTGACTTTTT 57.708 29.630 11.05 0.00 0.00 1.94
3694 6572 9.354673 TGACTTTTTAGAGATTTCAAATGGAGT 57.645 29.630 0.00 0.00 0.00 3.85
3710 6588 3.900971 TGGAGTACCACATACGGATGTA 58.099 45.455 14.23 0.00 44.82 2.29
3711 6589 4.476297 TGGAGTACCACATACGGATGTAT 58.524 43.478 14.23 7.46 44.82 2.29
3712 6590 5.633117 TGGAGTACCACATACGGATGTATA 58.367 41.667 14.23 6.38 44.82 1.47
3713 6591 6.250711 TGGAGTACCACATACGGATGTATAT 58.749 40.000 14.23 4.37 44.82 0.86
3714 6592 7.404481 TGGAGTACCACATACGGATGTATATA 58.596 38.462 14.23 3.33 44.82 0.86
3715 6593 7.555195 TGGAGTACCACATACGGATGTATATAG 59.445 40.741 14.23 0.00 44.82 1.31
3716 6594 7.772292 GGAGTACCACATACGGATGTATATAGA 59.228 40.741 14.23 0.00 44.82 1.98
3717 6595 8.503458 AGTACCACATACGGATGTATATAGAC 57.497 38.462 14.23 6.17 44.82 2.59
3718 6596 8.105197 AGTACCACATACGGATGTATATAGACA 58.895 37.037 14.23 2.07 44.82 3.41
3719 6597 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
3721 6599 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
3751 6629 7.516198 AGTGTAGATTCACTCATTTTGCTTT 57.484 32.000 0.00 0.00 44.07 3.51
3752 6630 7.365741 AGTGTAGATTCACTCATTTTGCTTTG 58.634 34.615 0.00 0.00 44.07 2.77
3754 6632 8.289618 GTGTAGATTCACTCATTTTGCTTTGTA 58.710 33.333 0.00 0.00 35.68 2.41
3759 6637 9.495754 GATTCACTCATTTTGCTTTGTATAGTC 57.504 33.333 0.00 0.00 0.00 2.59
3761 6639 7.806690 TCACTCATTTTGCTTTGTATAGTCAC 58.193 34.615 0.00 0.00 0.00 3.67
3763 6641 8.292448 CACTCATTTTGCTTTGTATAGTCACTT 58.708 33.333 0.00 0.00 0.00 3.16
3765 6643 8.165239 TCATTTTGCTTTGTATAGTCACTTGT 57.835 30.769 0.00 0.00 0.00 3.16
3802 6818 9.908152 AGAAAGACAAATATTTAAAAACGGAGG 57.092 29.630 0.00 0.00 0.00 4.30
3803 6819 9.135843 GAAAGACAAATATTTAAAAACGGAGGG 57.864 33.333 0.00 0.00 0.00 4.30
3804 6820 8.411991 AAGACAAATATTTAAAAACGGAGGGA 57.588 30.769 0.00 0.00 0.00 4.20
3805 6821 8.051901 AGACAAATATTTAAAAACGGAGGGAG 57.948 34.615 0.00 0.00 0.00 4.30
3806 6822 7.668469 AGACAAATATTTAAAAACGGAGGGAGT 59.332 33.333 0.00 0.00 0.00 3.85
3807 6823 8.866970 ACAAATATTTAAAAACGGAGGGAGTA 57.133 30.769 0.00 0.00 0.00 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.766496 ACGGTGTTTCTCTCCCTTTCA 59.234 47.619 0.00 0.00 0.00 2.69
20 21 2.545537 ACGGTGTTTCTCTCCCTTTC 57.454 50.000 0.00 0.00 0.00 2.62
37 38 0.109458 TCACACGCAAGCTAGGTACG 60.109 55.000 13.80 13.80 45.62 3.67
51 52 5.450550 GGGCCTTTAATAATGAAGCTCACAC 60.451 44.000 0.84 0.00 0.00 3.82
53 54 4.644685 TGGGCCTTTAATAATGAAGCTCAC 59.355 41.667 4.53 0.00 0.00 3.51
69 70 2.091333 TCTCTTTTGAACCTTGGGCCTT 60.091 45.455 4.53 0.00 0.00 4.35
136 137 9.134734 GAGCTGAAGAGGACTATTTTATTATCG 57.865 37.037 0.00 0.00 0.00 2.92
143 144 6.773638 TCAAAGAGCTGAAGAGGACTATTTT 58.226 36.000 0.00 0.00 0.00 1.82
145 146 6.155910 TCATCAAAGAGCTGAAGAGGACTATT 59.844 38.462 0.00 0.00 0.00 1.73
153 154 7.991460 ACATCATATTCATCAAAGAGCTGAAGA 59.009 33.333 0.00 0.00 35.97 2.87
156 157 7.658982 GGTACATCATATTCATCAAAGAGCTGA 59.341 37.037 0.00 0.00 0.00 4.26
218 228 3.010420 GGGTCTTTCTTTAGCGCAAGAT 58.990 45.455 11.47 0.00 43.02 2.40
262 272 2.363359 GGTATGGTTTATCCTCCGACGT 59.637 50.000 0.00 0.00 37.07 4.34
266 276 2.969950 TCAGGGTATGGTTTATCCTCCG 59.030 50.000 0.00 0.00 37.07 4.63
274 284 5.144100 TGTTGTTCATTCAGGGTATGGTTT 58.856 37.500 0.00 0.00 0.00 3.27
292 302 2.957402 TCTTGGCTCTTCCATGTTGT 57.043 45.000 0.00 0.00 46.04 3.32
302 312 0.462759 GTGGCGCTTATCTTGGCTCT 60.463 55.000 7.64 0.00 0.00 4.09
323 334 0.173481 GCTGCTGTATGTCGAGACCA 59.827 55.000 0.34 0.00 0.00 4.02
340 351 2.572333 ATAATGTGGGCAAGGCGGCT 62.572 55.000 5.25 5.25 40.90 5.52
375 386 8.788813 GTTTCATAAAAATCAACTACGATGCTG 58.211 33.333 0.00 0.00 0.00 4.41
381 392 9.672086 TTGAAGGTTTCATAAAAATCAACTACG 57.328 29.630 0.00 0.00 39.84 3.51
383 394 9.974980 GGTTGAAGGTTTCATAAAAATCAACTA 57.025 29.630 13.10 0.00 40.35 2.24
384 395 7.651704 CGGTTGAAGGTTTCATAAAAATCAACT 59.348 33.333 13.10 0.00 40.35 3.16
385 396 7.095816 CCGGTTGAAGGTTTCATAAAAATCAAC 60.096 37.037 0.00 6.74 40.11 3.18
388 399 6.452242 ACCGGTTGAAGGTTTCATAAAAATC 58.548 36.000 0.00 0.00 39.29 2.17
389 400 6.413783 ACCGGTTGAAGGTTTCATAAAAAT 57.586 33.333 0.00 0.00 39.29 1.82
390 401 5.855740 ACCGGTTGAAGGTTTCATAAAAA 57.144 34.783 0.00 0.00 39.29 1.94
413 424 5.048434 GCTTAGCAAAGTTTCAAGTGGATCT 60.048 40.000 0.00 0.00 34.99 2.75
432 444 3.434984 GGACAGTTTCAGAGCAAGCTTAG 59.565 47.826 0.00 0.00 0.00 2.18
434 446 2.158696 AGGACAGTTTCAGAGCAAGCTT 60.159 45.455 0.00 0.00 0.00 3.74
472 485 8.204836 AGCTGAATAAGATCAACTATTACCGTT 58.795 33.333 0.00 0.00 0.00 4.44
474 487 9.862371 ATAGCTGAATAAGATCAACTATTACCG 57.138 33.333 0.00 0.00 36.00 4.02
490 503 6.048732 TGTGGTCAACTTCATAGCTGAATA 57.951 37.500 0.00 0.00 40.52 1.75
492 505 4.350368 TGTGGTCAACTTCATAGCTGAA 57.650 40.909 0.00 0.00 39.07 3.02
546 560 6.842163 TCGAAGAAAACTAATTCATGAAGGC 58.158 36.000 14.54 0.00 0.00 4.35
615 945 4.209538 TGATGGATGGGTTGAATCATGAC 58.790 43.478 0.00 0.00 0.00 3.06
641 971 4.441792 AGATGTGTTTGGGCTTTTGTTTC 58.558 39.130 0.00 0.00 0.00 2.78
677 1070 1.376553 GGAGACACAGCCTCCTTGC 60.377 63.158 0.00 0.00 45.18 4.01
696 1089 0.908910 TTGCCGGGCTCAAGATTCTA 59.091 50.000 21.46 0.00 0.00 2.10
706 1099 1.757423 AATGTTTTGCTTGCCGGGCT 61.757 50.000 21.46 0.00 0.00 5.19
711 1104 3.434299 CCATGAAGAATGTTTTGCTTGCC 59.566 43.478 0.00 0.00 34.11 4.52
746 1139 3.948473 TGGAATCCGTGAAGTTGTTTCAA 59.052 39.130 0.00 0.00 46.85 2.69
747 1140 3.546724 TGGAATCCGTGAAGTTGTTTCA 58.453 40.909 0.00 0.00 43.40 2.69
748 1141 4.561735 TTGGAATCCGTGAAGTTGTTTC 57.438 40.909 0.00 0.00 36.29 2.78
751 1144 3.283751 TGTTTGGAATCCGTGAAGTTGT 58.716 40.909 0.00 0.00 0.00 3.32
752 1145 3.980646 TGTTTGGAATCCGTGAAGTTG 57.019 42.857 0.00 0.00 0.00 3.16
778 1186 9.898152 TTTATCTCTGTTTTCCAAACCAAAAAT 57.102 25.926 0.00 0.00 0.00 1.82
824 1238 2.747686 GTCTCCAACTGGGCCGAA 59.252 61.111 0.00 0.00 36.21 4.30
825 1239 3.691342 CGTCTCCAACTGGGCCGA 61.691 66.667 0.00 0.00 36.21 5.54
840 1254 3.667282 CGACCTGACCGGACACGT 61.667 66.667 9.46 8.62 38.78 4.49
874 1288 1.526041 CTAGACATACTCGGACGTCGG 59.474 57.143 16.37 16.37 39.77 4.79
875 1289 1.526041 CCTAGACATACTCGGACGTCG 59.474 57.143 9.92 5.26 33.87 5.12
876 1290 1.872313 CCCTAGACATACTCGGACGTC 59.128 57.143 7.13 7.13 33.87 4.34
877 1291 1.476471 CCCCTAGACATACTCGGACGT 60.476 57.143 0.00 0.00 33.87 4.34
878 1292 1.236628 CCCCTAGACATACTCGGACG 58.763 60.000 0.00 0.00 33.87 4.79
917 1331 6.244677 CGATCTCGCGCGATTTATATATAGAC 59.755 42.308 34.86 14.74 0.00 2.59
918 1332 6.145048 TCGATCTCGCGCGATTTATATATAGA 59.855 38.462 34.86 22.19 39.60 1.98
944 1365 1.462238 ATCGATTGGGGGAGGAGGG 60.462 63.158 0.00 0.00 0.00 4.30
978 1399 1.139734 CCCTCGACTCGTGTGGATG 59.860 63.158 2.77 0.92 30.77 3.51
2204 2714 0.597637 ACACAGACGCTGAAACCTCG 60.598 55.000 12.77 0.00 35.18 4.63
2513 3024 0.531200 AGCTAACCTACGAAAGCGCT 59.469 50.000 2.64 2.64 42.48 5.92
2689 3205 0.981183 TCAAGAAGAGCCCGGCTTTA 59.019 50.000 14.70 0.00 39.88 1.85
2729 3247 4.686396 CGGATCTCTACCTGGTACTTCAGA 60.686 50.000 1.49 0.00 36.93 3.27
2912 3430 1.001158 GCCTGCTCCTCGTAGTCATAC 60.001 57.143 0.00 0.00 0.00 2.39
2945 3463 5.039984 AGACGAATCAATCTTCACAGATCG 58.960 41.667 0.00 0.00 39.00 3.69
2957 3475 7.014134 AGACAGAGATATGACAGACGAATCAAT 59.986 37.037 0.00 0.00 0.00 2.57
2958 3476 6.319911 AGACAGAGATATGACAGACGAATCAA 59.680 38.462 0.00 0.00 0.00 2.57
2959 3477 5.825151 AGACAGAGATATGACAGACGAATCA 59.175 40.000 0.00 0.00 0.00 2.57
2960 3478 6.312399 AGACAGAGATATGACAGACGAATC 57.688 41.667 0.00 0.00 0.00 2.52
2961 3479 7.882791 AGATAGACAGAGATATGACAGACGAAT 59.117 37.037 0.00 0.00 0.00 3.34
2962 3480 7.220740 AGATAGACAGAGATATGACAGACGAA 58.779 38.462 0.00 0.00 0.00 3.85
2963 3481 6.764379 AGATAGACAGAGATATGACAGACGA 58.236 40.000 0.00 0.00 0.00 4.20
2964 3482 7.201522 GCTAGATAGACAGAGATATGACAGACG 60.202 44.444 0.00 0.00 0.00 4.18
2965 3483 7.824289 AGCTAGATAGACAGAGATATGACAGAC 59.176 40.741 0.00 0.00 0.00 3.51
2966 3484 7.917003 AGCTAGATAGACAGAGATATGACAGA 58.083 38.462 0.00 0.00 0.00 3.41
2967 3485 9.317936 CTAGCTAGATAGACAGAGATATGACAG 57.682 40.741 16.15 0.00 0.00 3.51
2968 3486 9.041354 TCTAGCTAGATAGACAGAGATATGACA 57.959 37.037 19.72 0.00 0.00 3.58
3004 3522 9.338622 GGATTGTTAAATACTAGCATGGTAACT 57.661 33.333 6.04 0.00 35.04 2.24
3005 3523 9.116067 TGGATTGTTAAATACTAGCATGGTAAC 57.884 33.333 6.04 2.05 35.04 2.50
3006 3524 9.860650 ATGGATTGTTAAATACTAGCATGGTAA 57.139 29.630 6.04 0.00 35.04 2.85
3007 3525 9.502091 GATGGATTGTTAAATACTAGCATGGTA 57.498 33.333 4.27 4.27 36.16 3.25
3008 3526 7.998383 TGATGGATTGTTAAATACTAGCATGGT 59.002 33.333 1.62 1.62 0.00 3.55
3009 3527 8.394971 TGATGGATTGTTAAATACTAGCATGG 57.605 34.615 0.00 0.00 0.00 3.66
3011 3529 9.236006 GGATGATGGATTGTTAAATACTAGCAT 57.764 33.333 0.00 0.00 0.00 3.79
3012 3530 7.387673 CGGATGATGGATTGTTAAATACTAGCA 59.612 37.037 0.00 0.00 0.00 3.49
3013 3531 7.387948 ACGGATGATGGATTGTTAAATACTAGC 59.612 37.037 0.00 0.00 0.00 3.42
3014 3532 8.712363 CACGGATGATGGATTGTTAAATACTAG 58.288 37.037 0.00 0.00 0.00 2.57
3015 3533 8.208224 ACACGGATGATGGATTGTTAAATACTA 58.792 33.333 0.00 0.00 0.00 1.82
3016 3534 7.054124 ACACGGATGATGGATTGTTAAATACT 58.946 34.615 0.00 0.00 0.00 2.12
3017 3535 7.259290 ACACGGATGATGGATTGTTAAATAC 57.741 36.000 0.00 0.00 0.00 1.89
3018 3536 9.214957 GATACACGGATGATGGATTGTTAAATA 57.785 33.333 0.00 0.00 0.00 1.40
3019 3537 7.939039 AGATACACGGATGATGGATTGTTAAAT 59.061 33.333 0.00 0.00 0.00 1.40
3020 3538 7.279615 AGATACACGGATGATGGATTGTTAAA 58.720 34.615 0.00 0.00 0.00 1.52
3021 3539 6.826668 AGATACACGGATGATGGATTGTTAA 58.173 36.000 0.00 0.00 0.00 2.01
3022 3540 6.419484 AGATACACGGATGATGGATTGTTA 57.581 37.500 0.00 0.00 0.00 2.41
3023 3541 5.296151 AGATACACGGATGATGGATTGTT 57.704 39.130 0.00 0.00 0.00 2.83
3024 3542 4.963318 AGATACACGGATGATGGATTGT 57.037 40.909 0.00 0.00 0.00 2.71
3025 3543 6.871844 AGATAGATACACGGATGATGGATTG 58.128 40.000 0.00 0.00 0.00 2.67
3026 3544 8.637099 CATAGATAGATACACGGATGATGGATT 58.363 37.037 0.00 0.00 0.00 3.01
3027 3545 7.782168 ACATAGATAGATACACGGATGATGGAT 59.218 37.037 0.00 0.00 0.00 3.41
3028 3546 7.119387 ACATAGATAGATACACGGATGATGGA 58.881 38.462 0.00 0.00 0.00 3.41
3029 3547 7.340122 ACATAGATAGATACACGGATGATGG 57.660 40.000 0.00 0.00 0.00 3.51
3030 3548 9.723447 GTAACATAGATAGATACACGGATGATG 57.277 37.037 0.00 0.00 0.00 3.07
3031 3549 9.688091 AGTAACATAGATAGATACACGGATGAT 57.312 33.333 0.00 0.00 0.00 2.45
3032 3550 8.947115 CAGTAACATAGATAGATACACGGATGA 58.053 37.037 0.00 0.00 0.00 2.92
3033 3551 8.947115 TCAGTAACATAGATAGATACACGGATG 58.053 37.037 0.00 0.00 0.00 3.51
3034 3552 9.516546 TTCAGTAACATAGATAGATACACGGAT 57.483 33.333 0.00 0.00 0.00 4.18
3035 3553 8.781196 GTTCAGTAACATAGATAGATACACGGA 58.219 37.037 0.00 0.00 35.56 4.69
3036 3554 8.021973 GGTTCAGTAACATAGATAGATACACGG 58.978 40.741 0.00 0.00 37.34 4.94
3037 3555 8.565416 TGGTTCAGTAACATAGATAGATACACG 58.435 37.037 0.00 0.00 37.34 4.49
3042 3560 8.589338 GGTGATGGTTCAGTAACATAGATAGAT 58.411 37.037 0.00 0.00 37.34 1.98
3043 3561 7.785028 AGGTGATGGTTCAGTAACATAGATAGA 59.215 37.037 0.00 0.00 37.34 1.98
3044 3562 7.957002 AGGTGATGGTTCAGTAACATAGATAG 58.043 38.462 0.00 0.00 37.34 2.08
3045 3563 7.914427 AGGTGATGGTTCAGTAACATAGATA 57.086 36.000 0.00 0.00 37.34 1.98
3046 3564 6.814954 AGGTGATGGTTCAGTAACATAGAT 57.185 37.500 0.00 0.00 37.34 1.98
3047 3565 7.344612 ACATAGGTGATGGTTCAGTAACATAGA 59.655 37.037 0.00 0.00 40.18 1.98
3048 3566 7.500992 ACATAGGTGATGGTTCAGTAACATAG 58.499 38.462 0.00 0.00 40.18 2.23
3049 3567 7.432148 ACATAGGTGATGGTTCAGTAACATA 57.568 36.000 0.00 0.00 40.18 2.29
3050 3568 6.313519 ACATAGGTGATGGTTCAGTAACAT 57.686 37.500 0.00 0.00 40.18 2.71
3051 3569 5.755409 ACATAGGTGATGGTTCAGTAACA 57.245 39.130 0.00 0.00 40.18 2.41
3052 3570 7.727181 AGATACATAGGTGATGGTTCAGTAAC 58.273 38.462 0.00 0.00 40.18 2.50
3053 3571 7.914427 AGATACATAGGTGATGGTTCAGTAA 57.086 36.000 0.00 0.00 40.18 2.24
3054 3572 9.078990 CTTAGATACATAGGTGATGGTTCAGTA 57.921 37.037 0.00 0.00 40.18 2.74
3055 3573 7.785028 TCTTAGATACATAGGTGATGGTTCAGT 59.215 37.037 0.00 0.00 40.18 3.41
3056 3574 8.085296 GTCTTAGATACATAGGTGATGGTTCAG 58.915 40.741 0.00 0.00 40.18 3.02
3057 3575 7.563556 TGTCTTAGATACATAGGTGATGGTTCA 59.436 37.037 0.00 0.00 40.18 3.18
3058 3576 7.952671 TGTCTTAGATACATAGGTGATGGTTC 58.047 38.462 0.00 0.00 40.18 3.62
3059 3577 7.914427 TGTCTTAGATACATAGGTGATGGTT 57.086 36.000 0.00 0.00 40.18 3.67
3060 3578 7.565398 ACTTGTCTTAGATACATAGGTGATGGT 59.435 37.037 0.00 0.00 40.18 3.55
3061 3579 7.957002 ACTTGTCTTAGATACATAGGTGATGG 58.043 38.462 0.00 0.00 40.18 3.51
3091 3609 8.557029 CCAAAGACGACTTAGTTTTTGAGTAAT 58.443 33.333 12.61 0.00 44.18 1.89
3092 3610 7.550196 ACCAAAGACGACTTAGTTTTTGAGTAA 59.450 33.333 12.61 0.00 44.18 2.24
3093 3611 7.010738 CACCAAAGACGACTTAGTTTTTGAGTA 59.989 37.037 12.61 0.00 44.18 2.59
3094 3612 5.878669 ACCAAAGACGACTTAGTTTTTGAGT 59.121 36.000 12.61 7.58 44.18 3.41
3095 3613 6.036735 TCACCAAAGACGACTTAGTTTTTGAG 59.963 38.462 12.61 7.12 44.18 3.02
3096 3614 5.875910 TCACCAAAGACGACTTAGTTTTTGA 59.124 36.000 12.61 0.00 44.18 2.69
3097 3615 6.114221 TCACCAAAGACGACTTAGTTTTTG 57.886 37.500 0.00 6.25 42.37 2.44
3098 3616 6.540914 TGATCACCAAAGACGACTTAGTTTTT 59.459 34.615 0.00 0.00 35.05 1.94
3099 3617 6.053005 TGATCACCAAAGACGACTTAGTTTT 58.947 36.000 0.00 0.00 35.05 2.43
3100 3618 5.607477 TGATCACCAAAGACGACTTAGTTT 58.393 37.500 0.00 0.00 35.05 2.66
3101 3619 5.209818 TGATCACCAAAGACGACTTAGTT 57.790 39.130 0.00 0.00 35.05 2.24
3102 3620 4.866508 TGATCACCAAAGACGACTTAGT 57.133 40.909 0.00 0.00 35.05 2.24
3103 3621 6.368791 TGAATTGATCACCAAAGACGACTTAG 59.631 38.462 0.00 0.00 38.43 2.18
3104 3622 6.227522 TGAATTGATCACCAAAGACGACTTA 58.772 36.000 0.00 0.00 38.43 2.24
3105 3623 5.063204 TGAATTGATCACCAAAGACGACTT 58.937 37.500 0.00 0.00 38.43 3.01
3106 3624 4.641396 TGAATTGATCACCAAAGACGACT 58.359 39.130 0.00 0.00 38.43 4.18
3107 3625 5.356882 TTGAATTGATCACCAAAGACGAC 57.643 39.130 0.00 0.00 37.92 4.34
3108 3626 6.206438 TCAATTGAATTGATCACCAAAGACGA 59.794 34.615 16.04 0.00 43.84 4.20
3109 3627 6.380995 TCAATTGAATTGATCACCAAAGACG 58.619 36.000 16.04 0.00 43.84 4.18
3122 3640 8.978539 CATGCCAATAGAGAATCAATTGAATTG 58.021 33.333 13.09 15.14 41.57 2.32
3123 3641 8.701895 ACATGCCAATAGAGAATCAATTGAATT 58.298 29.630 13.09 7.46 37.82 2.17
3124 3642 8.246430 ACATGCCAATAGAGAATCAATTGAAT 57.754 30.769 13.09 3.42 37.82 2.57
3125 3643 7.339976 TGACATGCCAATAGAGAATCAATTGAA 59.660 33.333 13.09 0.00 37.82 2.69
3126 3644 6.829811 TGACATGCCAATAGAGAATCAATTGA 59.170 34.615 11.26 11.26 37.82 2.57
3127 3645 7.034685 TGACATGCCAATAGAGAATCAATTG 57.965 36.000 0.00 0.00 37.82 2.32
3128 3646 7.341256 ACTTGACATGCCAATAGAGAATCAATT 59.659 33.333 0.00 0.00 37.82 2.32
3129 3647 6.832384 ACTTGACATGCCAATAGAGAATCAAT 59.168 34.615 0.00 0.00 37.82 2.57
3130 3648 6.182627 ACTTGACATGCCAATAGAGAATCAA 58.817 36.000 0.00 0.00 37.82 2.57
3131 3649 5.748402 ACTTGACATGCCAATAGAGAATCA 58.252 37.500 0.00 0.00 37.82 2.57
3132 3650 7.976135 ATACTTGACATGCCAATAGAGAATC 57.024 36.000 0.00 0.00 0.00 2.52
3133 3651 8.432013 TGTATACTTGACATGCCAATAGAGAAT 58.568 33.333 4.17 0.00 0.00 2.40
3134 3652 7.791029 TGTATACTTGACATGCCAATAGAGAA 58.209 34.615 4.17 0.00 0.00 2.87
3135 3653 7.360113 TGTATACTTGACATGCCAATAGAGA 57.640 36.000 4.17 0.00 0.00 3.10
3136 3654 8.501580 CATTGTATACTTGACATGCCAATAGAG 58.498 37.037 4.17 0.00 0.00 2.43
3137 3655 7.992608 ACATTGTATACTTGACATGCCAATAGA 59.007 33.333 4.17 0.00 0.00 1.98
3138 3656 8.071967 CACATTGTATACTTGACATGCCAATAG 58.928 37.037 4.17 0.00 0.00 1.73
3139 3657 7.555914 ACACATTGTATACTTGACATGCCAATA 59.444 33.333 4.17 0.00 0.00 1.90
3140 3658 6.377996 ACACATTGTATACTTGACATGCCAAT 59.622 34.615 4.17 0.00 0.00 3.16
3141 3659 5.709631 ACACATTGTATACTTGACATGCCAA 59.290 36.000 4.17 0.00 0.00 4.52
3142 3660 5.123661 CACACATTGTATACTTGACATGCCA 59.876 40.000 4.17 0.00 0.00 4.92
3143 3661 5.123820 ACACACATTGTATACTTGACATGCC 59.876 40.000 4.17 0.00 36.32 4.40
3144 3662 6.182039 ACACACATTGTATACTTGACATGC 57.818 37.500 4.17 0.00 36.32 4.06
3145 3663 7.538334 CCAAACACACATTGTATACTTGACATG 59.462 37.037 4.17 0.00 37.51 3.21
3146 3664 7.309133 CCCAAACACACATTGTATACTTGACAT 60.309 37.037 4.17 0.00 37.51 3.06
3147 3665 6.016693 CCCAAACACACATTGTATACTTGACA 60.017 38.462 4.17 0.00 37.51 3.58
3148 3666 6.378582 CCCAAACACACATTGTATACTTGAC 58.621 40.000 4.17 0.00 37.51 3.18
3149 3667 5.048364 GCCCAAACACACATTGTATACTTGA 60.048 40.000 4.17 0.00 37.51 3.02
3150 3668 5.048083 AGCCCAAACACACATTGTATACTTG 60.048 40.000 4.17 4.80 37.51 3.16
3151 3669 5.076873 AGCCCAAACACACATTGTATACTT 58.923 37.500 4.17 0.00 37.51 2.24
3152 3670 4.662278 AGCCCAAACACACATTGTATACT 58.338 39.130 4.17 0.00 37.51 2.12
3153 3671 4.142469 GGAGCCCAAACACACATTGTATAC 60.142 45.833 0.00 0.00 37.51 1.47
3154 3672 4.013728 GGAGCCCAAACACACATTGTATA 58.986 43.478 0.00 0.00 37.51 1.47
3155 3673 2.825532 GGAGCCCAAACACACATTGTAT 59.174 45.455 0.00 0.00 37.51 2.29
3156 3674 2.158534 AGGAGCCCAAACACACATTGTA 60.159 45.455 0.00 0.00 37.51 2.41
3157 3675 1.039856 GGAGCCCAAACACACATTGT 58.960 50.000 0.00 0.00 41.74 2.71
3158 3676 1.331214 AGGAGCCCAAACACACATTG 58.669 50.000 0.00 0.00 0.00 2.82
3159 3677 2.969821 TAGGAGCCCAAACACACATT 57.030 45.000 0.00 0.00 0.00 2.71
3160 3678 2.969821 TTAGGAGCCCAAACACACAT 57.030 45.000 0.00 0.00 0.00 3.21
3161 3679 2.969821 ATTAGGAGCCCAAACACACA 57.030 45.000 0.00 0.00 0.00 3.72
3162 3680 4.380550 GCTAAATTAGGAGCCCAAACACAC 60.381 45.833 1.88 0.00 32.25 3.82
3163 3681 3.761752 GCTAAATTAGGAGCCCAAACACA 59.238 43.478 1.88 0.00 32.25 3.72
3164 3682 4.371855 GCTAAATTAGGAGCCCAAACAC 57.628 45.455 1.88 0.00 32.25 3.32
3172 3690 3.632333 ACCAAAGGGCTAAATTAGGAGC 58.368 45.455 1.88 0.00 37.90 4.70
3173 3691 6.365520 ACATACCAAAGGGCTAAATTAGGAG 58.634 40.000 1.88 0.00 37.90 3.69
3174 3692 6.335781 ACATACCAAAGGGCTAAATTAGGA 57.664 37.500 1.88 0.00 37.90 2.94
3175 3693 8.706322 ATAACATACCAAAGGGCTAAATTAGG 57.294 34.615 1.88 0.00 37.90 2.69
3179 3697 9.482175 TGTTTATAACATACCAAAGGGCTAAAT 57.518 29.630 0.00 0.00 36.25 1.40
3180 3698 8.880991 TGTTTATAACATACCAAAGGGCTAAA 57.119 30.769 0.00 0.00 36.25 1.85
3181 3699 8.741841 GTTGTTTATAACATACCAAAGGGCTAA 58.258 33.333 0.00 0.00 41.79 3.09
3182 3700 7.889073 TGTTGTTTATAACATACCAAAGGGCTA 59.111 33.333 0.00 0.00 41.79 3.93
3183 3701 6.722129 TGTTGTTTATAACATACCAAAGGGCT 59.278 34.615 0.00 0.00 41.79 5.19
3184 3702 6.926313 TGTTGTTTATAACATACCAAAGGGC 58.074 36.000 0.00 0.00 41.79 5.19
3185 3703 9.936759 ATTTGTTGTTTATAACATACCAAAGGG 57.063 29.630 13.16 0.00 41.79 3.95
3200 3718 9.843334 ACTACAAGACGAAAAATTTGTTGTTTA 57.157 25.926 2.64 0.00 36.57 2.01
3201 3719 8.643752 CACTACAAGACGAAAAATTTGTTGTTT 58.356 29.630 2.64 0.00 37.38 2.83
3202 3720 7.810759 ACACTACAAGACGAAAAATTTGTTGTT 59.189 29.630 2.64 0.00 37.38 2.83
3203 3721 7.309920 ACACTACAAGACGAAAAATTTGTTGT 58.690 30.769 0.44 0.44 39.06 3.32
3204 3722 7.734538 ACACTACAAGACGAAAAATTTGTTG 57.265 32.000 0.00 0.00 35.55 3.33
3205 3723 8.643752 CAAACACTACAAGACGAAAAATTTGTT 58.356 29.630 0.00 0.00 35.55 2.83
3206 3724 8.024285 TCAAACACTACAAGACGAAAAATTTGT 58.976 29.630 0.00 0.00 37.51 2.83
3207 3725 8.388319 TCAAACACTACAAGACGAAAAATTTG 57.612 30.769 0.00 0.00 0.00 2.32
3208 3726 8.973835 TTCAAACACTACAAGACGAAAAATTT 57.026 26.923 0.00 0.00 0.00 1.82
3209 3727 8.973835 TTTCAAACACTACAAGACGAAAAATT 57.026 26.923 0.00 0.00 0.00 1.82
3212 3730 9.872757 GATATTTCAAACACTACAAGACGAAAA 57.127 29.630 0.00 0.00 0.00 2.29
3213 3731 9.268268 AGATATTTCAAACACTACAAGACGAAA 57.732 29.630 0.00 0.00 0.00 3.46
3214 3732 8.827177 AGATATTTCAAACACTACAAGACGAA 57.173 30.769 0.00 0.00 0.00 3.85
3215 3733 8.708742 CAAGATATTTCAAACACTACAAGACGA 58.291 33.333 0.00 0.00 0.00 4.20
3216 3734 7.957484 CCAAGATATTTCAAACACTACAAGACG 59.043 37.037 0.00 0.00 0.00 4.18
3217 3735 8.784043 ACCAAGATATTTCAAACACTACAAGAC 58.216 33.333 0.00 0.00 0.00 3.01
3218 3736 8.918202 ACCAAGATATTTCAAACACTACAAGA 57.082 30.769 0.00 0.00 0.00 3.02
3219 3737 9.398170 CAACCAAGATATTTCAAACACTACAAG 57.602 33.333 0.00 0.00 0.00 3.16
3220 3738 8.908903 ACAACCAAGATATTTCAAACACTACAA 58.091 29.630 0.00 0.00 0.00 2.41
3221 3739 8.458573 ACAACCAAGATATTTCAAACACTACA 57.541 30.769 0.00 0.00 0.00 2.74
3222 3740 8.564574 TGACAACCAAGATATTTCAAACACTAC 58.435 33.333 0.00 0.00 0.00 2.73
3223 3741 8.564574 GTGACAACCAAGATATTTCAAACACTA 58.435 33.333 0.00 0.00 0.00 2.74
3224 3742 7.068103 TGTGACAACCAAGATATTTCAAACACT 59.932 33.333 0.00 0.00 0.00 3.55
3225 3743 7.199766 TGTGACAACCAAGATATTTCAAACAC 58.800 34.615 0.00 0.00 0.00 3.32
3226 3744 7.340122 TGTGACAACCAAGATATTTCAAACA 57.660 32.000 0.00 0.00 0.00 2.83
3227 3745 8.134895 TCTTGTGACAACCAAGATATTTCAAAC 58.865 33.333 0.00 0.00 42.43 2.93
3228 3746 8.231692 TCTTGTGACAACCAAGATATTTCAAA 57.768 30.769 0.00 0.00 42.43 2.69
3229 3747 7.815840 TCTTGTGACAACCAAGATATTTCAA 57.184 32.000 0.00 0.00 42.43 2.69
3238 3756 4.392940 AGAAGGATCTTGTGACAACCAAG 58.607 43.478 6.28 0.43 40.51 3.61
3239 3757 4.389374 GAGAAGGATCTTGTGACAACCAA 58.611 43.478 6.28 0.00 35.54 3.67
3240 3758 3.244561 GGAGAAGGATCTTGTGACAACCA 60.245 47.826 6.28 0.00 35.54 3.67
3241 3759 3.008485 AGGAGAAGGATCTTGTGACAACC 59.992 47.826 0.00 0.00 35.54 3.77
3242 3760 3.999663 CAGGAGAAGGATCTTGTGACAAC 59.000 47.826 0.00 0.00 35.54 3.32
3243 3761 3.008375 CCAGGAGAAGGATCTTGTGACAA 59.992 47.826 0.00 0.00 35.54 3.18
3244 3762 2.568956 CCAGGAGAAGGATCTTGTGACA 59.431 50.000 0.00 0.00 35.54 3.58
3245 3763 2.834549 TCCAGGAGAAGGATCTTGTGAC 59.165 50.000 0.00 0.00 35.54 3.67
3246 3764 3.190383 TCCAGGAGAAGGATCTTGTGA 57.810 47.619 0.00 0.00 35.54 3.58
3247 3765 3.453717 TCATCCAGGAGAAGGATCTTGTG 59.546 47.826 0.00 0.00 43.90 3.33
3248 3766 3.454082 GTCATCCAGGAGAAGGATCTTGT 59.546 47.826 0.00 0.00 43.90 3.16
3249 3767 3.453717 TGTCATCCAGGAGAAGGATCTTG 59.546 47.826 0.00 0.00 43.90 3.02
3250 3768 3.729108 TGTCATCCAGGAGAAGGATCTT 58.271 45.455 0.00 0.00 43.90 2.40
3251 3769 3.411454 TGTCATCCAGGAGAAGGATCT 57.589 47.619 0.00 0.00 43.90 2.75
3252 3770 3.708631 TCTTGTCATCCAGGAGAAGGATC 59.291 47.826 0.00 0.00 43.90 3.36
3253 3771 3.729108 TCTTGTCATCCAGGAGAAGGAT 58.271 45.455 0.00 0.00 46.61 3.24
3254 3772 3.190383 TCTTGTCATCCAGGAGAAGGA 57.810 47.619 0.00 0.00 38.37 3.36
3255 3773 3.604582 GTTCTTGTCATCCAGGAGAAGG 58.395 50.000 0.00 0.00 38.37 3.46
3256 3774 3.257393 CGTTCTTGTCATCCAGGAGAAG 58.743 50.000 0.00 0.00 38.98 2.85
3257 3775 2.612972 GCGTTCTTGTCATCCAGGAGAA 60.613 50.000 0.00 0.00 29.93 2.87
3258 3776 1.066858 GCGTTCTTGTCATCCAGGAGA 60.067 52.381 0.00 0.00 29.93 3.71
3259 3777 1.363744 GCGTTCTTGTCATCCAGGAG 58.636 55.000 0.00 0.00 29.93 3.69
3260 3778 0.036388 GGCGTTCTTGTCATCCAGGA 60.036 55.000 0.00 0.00 0.00 3.86
3261 3779 0.321564 TGGCGTTCTTGTCATCCAGG 60.322 55.000 0.00 0.00 0.00 4.45
3262 3780 1.742761 ATGGCGTTCTTGTCATCCAG 58.257 50.000 0.00 0.00 24.17 3.86
3263 3781 2.083774 GAATGGCGTTCTTGTCATCCA 58.916 47.619 12.18 0.00 31.77 3.41
3264 3782 1.401905 GGAATGGCGTTCTTGTCATCC 59.598 52.381 18.28 0.00 31.77 3.51
3265 3783 2.096496 CAGGAATGGCGTTCTTGTCATC 59.904 50.000 20.03 3.03 38.66 2.92
3266 3784 2.086869 CAGGAATGGCGTTCTTGTCAT 58.913 47.619 20.03 0.00 38.66 3.06
3267 3785 1.522668 CAGGAATGGCGTTCTTGTCA 58.477 50.000 20.03 0.00 38.66 3.58
3268 3786 0.169009 GCAGGAATGGCGTTCTTGTC 59.831 55.000 26.18 17.36 43.66 3.18
3269 3787 0.250901 AGCAGGAATGGCGTTCTTGT 60.251 50.000 26.18 14.24 43.66 3.16
3270 3788 0.169672 CAGCAGGAATGGCGTTCTTG 59.830 55.000 22.96 22.96 44.35 3.02
3271 3789 0.036732 TCAGCAGGAATGGCGTTCTT 59.963 50.000 18.28 8.85 37.01 2.52
3272 3790 0.674895 GTCAGCAGGAATGGCGTTCT 60.675 55.000 18.28 2.88 37.01 3.01
3273 3791 0.674895 AGTCAGCAGGAATGGCGTTC 60.675 55.000 11.04 11.04 36.08 3.95
3274 3792 0.250901 AAGTCAGCAGGAATGGCGTT 60.251 50.000 0.00 0.00 36.08 4.84
3275 3793 0.674895 GAAGTCAGCAGGAATGGCGT 60.675 55.000 0.00 0.00 36.08 5.68
3276 3794 0.392193 AGAAGTCAGCAGGAATGGCG 60.392 55.000 0.00 0.00 36.08 5.69
3277 3795 1.471684 CAAGAAGTCAGCAGGAATGGC 59.528 52.381 0.00 0.00 0.00 4.40
3278 3796 3.063510 TCAAGAAGTCAGCAGGAATGG 57.936 47.619 0.00 0.00 0.00 3.16
3279 3797 4.094590 GTCATCAAGAAGTCAGCAGGAATG 59.905 45.833 0.00 0.00 0.00 2.67
3280 3798 4.019501 AGTCATCAAGAAGTCAGCAGGAAT 60.020 41.667 0.00 0.00 0.00 3.01
3281 3799 3.326006 AGTCATCAAGAAGTCAGCAGGAA 59.674 43.478 0.00 0.00 0.00 3.36
3282 3800 2.902486 AGTCATCAAGAAGTCAGCAGGA 59.098 45.455 0.00 0.00 0.00 3.86
3283 3801 3.331478 AGTCATCAAGAAGTCAGCAGG 57.669 47.619 0.00 0.00 0.00 4.85
3284 3802 3.367327 CGAAGTCATCAAGAAGTCAGCAG 59.633 47.826 0.00 0.00 0.00 4.24
3285 3803 3.243873 ACGAAGTCATCAAGAAGTCAGCA 60.244 43.478 0.00 0.00 29.74 4.41
3286 3804 3.122613 CACGAAGTCATCAAGAAGTCAGC 59.877 47.826 0.00 0.00 41.61 4.26
3287 3805 4.550422 TCACGAAGTCATCAAGAAGTCAG 58.450 43.478 0.00 0.00 41.61 3.51
3288 3806 4.584327 TCACGAAGTCATCAAGAAGTCA 57.416 40.909 0.00 0.00 41.61 3.41
3289 3807 5.508124 CTTCACGAAGTCATCAAGAAGTC 57.492 43.478 0.00 0.00 41.61 3.01
3614 6492 1.678101 GGCTGGTTCAATAGCATGGAC 59.322 52.381 0.00 0.00 41.63 4.02
3630 6508 5.105797 GGAGAGAGTACATAGATGATGGCTG 60.106 48.000 0.00 0.00 40.18 4.85
3632 6510 4.142491 CGGAGAGAGTACATAGATGATGGC 60.142 50.000 0.00 0.00 40.18 4.40
3641 6519 9.584008 AATATTTAGGAACGGAGAGAGTACATA 57.416 33.333 0.00 0.00 0.00 2.29
3647 6525 7.493367 AGTCAAATATTTAGGAACGGAGAGAG 58.507 38.462 0.00 0.00 0.00 3.20
3649 6527 8.494016 AAAGTCAAATATTTAGGAACGGAGAG 57.506 34.615 0.00 0.00 0.00 3.20
3668 6546 9.354673 ACTCCATTTGAAATCTCTAAAAAGTCA 57.645 29.630 0.00 0.00 0.00 3.41
3672 6550 9.581289 TGGTACTCCATTTGAAATCTCTAAAAA 57.419 29.630 0.00 0.00 39.03 1.94
3673 6551 9.010029 GTGGTACTCCATTTGAAATCTCTAAAA 57.990 33.333 0.00 0.00 46.20 1.52
3674 6552 8.160765 TGTGGTACTCCATTTGAAATCTCTAAA 58.839 33.333 0.00 0.00 46.20 1.85
3675 6553 7.685481 TGTGGTACTCCATTTGAAATCTCTAA 58.315 34.615 0.00 0.00 46.20 2.10
3676 6554 7.252612 TGTGGTACTCCATTTGAAATCTCTA 57.747 36.000 0.00 0.00 46.20 2.43
3677 6555 6.126863 TGTGGTACTCCATTTGAAATCTCT 57.873 37.500 0.00 0.00 46.20 3.10
3678 6556 7.254455 CGTATGTGGTACTCCATTTGAAATCTC 60.254 40.741 3.69 0.00 46.20 2.75
3679 6557 6.538742 CGTATGTGGTACTCCATTTGAAATCT 59.461 38.462 3.69 0.00 46.20 2.40
3680 6558 6.238374 CCGTATGTGGTACTCCATTTGAAATC 60.238 42.308 3.69 0.00 46.20 2.17
3681 6559 5.588648 CCGTATGTGGTACTCCATTTGAAAT 59.411 40.000 3.69 0.00 46.20 2.17
3682 6560 4.938832 CCGTATGTGGTACTCCATTTGAAA 59.061 41.667 3.69 0.00 46.20 2.69
3683 6561 4.223255 TCCGTATGTGGTACTCCATTTGAA 59.777 41.667 3.69 0.00 46.20 2.69
3684 6562 3.770388 TCCGTATGTGGTACTCCATTTGA 59.230 43.478 3.69 0.00 46.20 2.69
3685 6563 4.131649 TCCGTATGTGGTACTCCATTTG 57.868 45.455 3.69 0.00 46.20 2.32
3686 6564 4.163458 ACATCCGTATGTGGTACTCCATTT 59.837 41.667 0.00 0.00 44.79 2.32
3687 6565 3.709653 ACATCCGTATGTGGTACTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
3688 6566 3.305720 ACATCCGTATGTGGTACTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
3689 6567 2.742348 ACATCCGTATGTGGTACTCCA 58.258 47.619 0.00 0.00 44.79 3.86
3690 6568 6.770746 ATATACATCCGTATGTGGTACTCC 57.229 41.667 3.56 0.00 45.99 3.85
3691 6569 8.610896 GTCTATATACATCCGTATGTGGTACTC 58.389 40.741 3.56 0.00 45.99 2.59
3692 6570 8.105197 TGTCTATATACATCCGTATGTGGTACT 58.895 37.037 3.56 0.00 45.99 2.73
3693 6571 8.272545 TGTCTATATACATCCGTATGTGGTAC 57.727 38.462 3.56 0.00 45.99 3.34
3695 6573 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
3728 6606 7.141363 ACAAAGCAAAATGAGTGAATCTACAC 58.859 34.615 0.00 0.00 40.60 2.90
3729 6607 7.275888 ACAAAGCAAAATGAGTGAATCTACA 57.724 32.000 0.00 0.00 0.00 2.74
3732 6610 9.236006 ACTATACAAAGCAAAATGAGTGAATCT 57.764 29.630 0.00 0.00 0.00 2.40
3733 6611 9.495754 GACTATACAAAGCAAAATGAGTGAATC 57.504 33.333 0.00 0.00 0.00 2.52
3734 6612 9.013229 TGACTATACAAAGCAAAATGAGTGAAT 57.987 29.630 0.00 0.00 0.00 2.57
3735 6613 8.289618 GTGACTATACAAAGCAAAATGAGTGAA 58.710 33.333 0.00 0.00 0.00 3.18
3736 6614 7.661437 AGTGACTATACAAAGCAAAATGAGTGA 59.339 33.333 0.00 0.00 0.00 3.41
3737 6615 7.810658 AGTGACTATACAAAGCAAAATGAGTG 58.189 34.615 0.00 0.00 0.00 3.51
3738 6616 7.986085 AGTGACTATACAAAGCAAAATGAGT 57.014 32.000 0.00 0.00 0.00 3.41
3739 6617 8.292448 ACAAGTGACTATACAAAGCAAAATGAG 58.708 33.333 0.00 0.00 0.00 2.90
3740 6618 8.165239 ACAAGTGACTATACAAAGCAAAATGA 57.835 30.769 0.00 0.00 0.00 2.57
3741 6619 8.801715 AACAAGTGACTATACAAAGCAAAATG 57.198 30.769 0.00 0.00 0.00 2.32
3746 6624 9.891828 CATTTTAACAAGTGACTATACAAAGCA 57.108 29.630 0.00 0.00 0.00 3.91
3747 6625 9.893305 ACATTTTAACAAGTGACTATACAAAGC 57.107 29.630 0.00 0.00 0.00 3.51
3788 6804 8.963725 CCTTAATTACTCCCTCCGTTTTTAAAT 58.036 33.333 0.00 0.00 0.00 1.40
3790 6806 7.391275 CACCTTAATTACTCCCTCCGTTTTTAA 59.609 37.037 0.00 0.00 0.00 1.52
3794 6810 4.287845 ACACCTTAATTACTCCCTCCGTTT 59.712 41.667 0.00 0.00 0.00 3.60
3795 6811 3.842436 ACACCTTAATTACTCCCTCCGTT 59.158 43.478 0.00 0.00 0.00 4.44
3796 6812 3.447950 ACACCTTAATTACTCCCTCCGT 58.552 45.455 0.00 0.00 0.00 4.69
3797 6813 3.705072 AGACACCTTAATTACTCCCTCCG 59.295 47.826 0.00 0.00 0.00 4.63
3798 6814 4.470304 ACAGACACCTTAATTACTCCCTCC 59.530 45.833 0.00 0.00 0.00 4.30
3799 6815 5.046520 ACACAGACACCTTAATTACTCCCTC 60.047 44.000 0.00 0.00 0.00 4.30
3800 6816 4.844655 ACACAGACACCTTAATTACTCCCT 59.155 41.667 0.00 0.00 0.00 4.20
3801 6817 5.161943 ACACAGACACCTTAATTACTCCC 57.838 43.478 0.00 0.00 0.00 4.30
3802 6818 4.863131 CGACACAGACACCTTAATTACTCC 59.137 45.833 0.00 0.00 0.00 3.85
3803 6819 4.326548 GCGACACAGACACCTTAATTACTC 59.673 45.833 0.00 0.00 0.00 2.59
3804 6820 4.021368 AGCGACACAGACACCTTAATTACT 60.021 41.667 0.00 0.00 0.00 2.24
3805 6821 4.243270 AGCGACACAGACACCTTAATTAC 58.757 43.478 0.00 0.00 0.00 1.89
3806 6822 4.530710 AGCGACACAGACACCTTAATTA 57.469 40.909 0.00 0.00 0.00 1.40
3807 6823 3.402628 AGCGACACAGACACCTTAATT 57.597 42.857 0.00 0.00 0.00 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.