Multiple sequence alignment - TraesCS3D01G438500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G438500 chr3D 100.000 3251 0 0 1 3251 549350176 549346926 0.000000e+00 6004.0
1 TraesCS3D01G438500 chr3D 82.574 1360 198 23 364 1701 458885959 458884617 0.000000e+00 1162.0
2 TraesCS3D01G438500 chr3D 83.209 1203 163 28 306 1486 549468074 549466889 0.000000e+00 1066.0
3 TraesCS3D01G438500 chr3D 81.332 1366 194 36 370 1701 548694334 548695672 0.000000e+00 1053.0
4 TraesCS3D01G438500 chr3D 81.046 1319 189 41 416 1704 549061919 549060632 0.000000e+00 994.0
5 TraesCS3D01G438500 chr3D 80.205 1369 190 46 322 1634 548725514 548726857 0.000000e+00 952.0
6 TraesCS3D01G438500 chr3D 93.968 315 15 3 2920 3233 61660738 61660427 1.060000e-129 473.0
7 TraesCS3D01G438500 chr3D 80.998 621 85 16 1710 2324 458884414 458883821 2.290000e-126 462.0
8 TraesCS3D01G438500 chr3D 78.862 492 49 26 2336 2794 549463344 549462875 6.870000e-72 281.0
9 TraesCS3D01G438500 chr3D 79.036 415 68 12 1936 2339 549066643 549066237 1.920000e-67 267.0
10 TraesCS3D01G438500 chr3D 81.385 231 32 6 2109 2339 548706204 548706423 9.270000e-41 178.0
11 TraesCS3D01G438500 chr3D 76.415 318 53 16 2336 2639 549059906 549059597 5.620000e-33 152.0
12 TraesCS3D01G438500 chr3D 81.452 124 15 6 2524 2639 549050262 549050139 9.600000e-16 95.3
13 TraesCS3D01G438500 chr3D 87.302 63 5 2 2799 2859 549462848 549462787 5.820000e-08 69.4
14 TraesCS3D01G438500 chr3B 83.495 1442 192 20 221 1626 728890888 728889457 0.000000e+00 1303.0
15 TraesCS3D01G438500 chr3B 81.142 1384 196 43 349 1694 728510851 728509495 0.000000e+00 1050.0
16 TraesCS3D01G438500 chr3B 80.657 1370 200 38 368 1701 727740594 727741934 0.000000e+00 1002.0
17 TraesCS3D01G438500 chr3B 81.540 1208 176 28 519 1701 605912628 605911443 0.000000e+00 952.0
18 TraesCS3D01G438500 chr3B 79.954 1292 188 48 322 1560 727786482 727787755 0.000000e+00 885.0
19 TraesCS3D01G438500 chr3B 85.080 563 40 22 2336 2859 728803370 728802813 4.770000e-148 534.0
20 TraesCS3D01G438500 chr3B 80.095 633 94 15 1696 2323 605911254 605910649 2.980000e-120 442.0
21 TraesCS3D01G438500 chr3B 87.003 377 37 4 333 698 728618236 728617861 6.490000e-112 414.0
22 TraesCS3D01G438500 chr3B 93.165 278 18 1 2062 2338 728803595 728803318 1.090000e-109 407.0
23 TraesCS3D01G438500 chr3B 80.448 491 47 28 2336 2794 728888568 728888095 2.420000e-86 329.0
24 TraesCS3D01G438500 chr3B 93.056 216 12 3 77 292 728803809 728803597 2.440000e-81 313.0
25 TraesCS3D01G438500 chr3B 81.361 338 49 9 1696 2031 728889181 728888856 2.490000e-66 263.0
26 TraesCS3D01G438500 chr3B 77.024 457 78 16 1902 2339 728584144 728583696 1.510000e-58 237.0
27 TraesCS3D01G438500 chr3B 79.221 231 31 11 2416 2639 728583653 728583433 9.400000e-31 145.0
28 TraesCS3D01G438500 chr3B 96.875 32 1 0 2447 2478 728501970 728501939 2.000000e-03 54.7
29 TraesCS3D01G438500 chr3A 82.474 1552 202 33 196 1701 601134159 601132632 0.000000e+00 1295.0
30 TraesCS3D01G438500 chr3A 83.171 1337 186 26 314 1626 686749907 686748586 0.000000e+00 1186.0
31 TraesCS3D01G438500 chr3A 81.691 1360 200 29 370 1701 686183074 686184412 0.000000e+00 1086.0
32 TraesCS3D01G438500 chr3A 80.466 1331 193 42 360 1637 686189706 686191022 0.000000e+00 955.0
33 TraesCS3D01G438500 chr3A 79.254 858 118 33 302 1123 686551698 686550865 7.930000e-151 544.0
34 TraesCS3D01G438500 chr3A 83.303 545 76 11 1160 1699 686549844 686549310 3.770000e-134 488.0
35 TraesCS3D01G438500 chr3A 78.414 454 75 14 1902 2339 686548982 686548536 1.150000e-69 274.0
36 TraesCS3D01G438500 chr3A 83.398 259 35 3 2081 2338 686747886 686747635 1.950000e-57 233.0
37 TraesCS3D01G438500 chr3A 85.326 184 19 3 2143 2324 601131966 601131789 1.990000e-42 183.0
38 TraesCS3D01G438500 chr3A 81.385 231 33 7 2411 2639 601131740 601131518 2.580000e-41 180.0
39 TraesCS3D01G438500 chr3A 81.026 195 27 9 2447 2639 686537081 686536895 2.610000e-31 147.0
40 TraesCS3D01G438500 chr3A 100.000 29 0 0 259 287 686189649 686189677 2.000000e-03 54.7
41 TraesCS3D01G438500 chr3A 100.000 29 0 0 2447 2475 686531203 686531175 2.000000e-03 54.7
42 TraesCS3D01G438500 chr7B 84.320 1250 169 17 404 1633 543187023 543188265 0.000000e+00 1197.0
43 TraesCS3D01G438500 chr7B 92.447 331 23 2 2908 3237 580612215 580612544 3.800000e-129 472.0
44 TraesCS3D01G438500 chr7B 77.487 382 47 26 2559 2912 543190432 543190802 3.310000e-45 193.0
45 TraesCS3D01G438500 chrUn 95.238 336 15 1 2917 3251 314982405 314982740 6.180000e-147 531.0
46 TraesCS3D01G438500 chrUn 94.940 336 16 1 2917 3251 315004443 315004778 2.870000e-145 525.0
47 TraesCS3D01G438500 chr4D 94.311 334 14 4 2920 3251 143573302 143572972 1.040000e-139 507.0
48 TraesCS3D01G438500 chr6A 93.846 325 18 2 2914 3237 52852917 52853240 3.770000e-134 488.0
49 TraesCS3D01G438500 chr2D 94.620 316 13 3 2919 3233 61251998 61251686 1.360000e-133 486.0
50 TraesCS3D01G438500 chr7D 94.340 318 14 3 2917 3233 19181755 19182069 4.880000e-133 484.0
51 TraesCS3D01G438500 chr1D 94.603 315 13 3 2920 3233 461375186 461374875 4.880000e-133 484.0
52 TraesCS3D01G438500 chr4B 76.415 212 28 12 2444 2639 648897170 648896965 9.600000e-16 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G438500 chr3D 549346926 549350176 3250 True 6004.000000 6004 100.000000 1 3251 1 chr3D.!!$R4 3250
1 TraesCS3D01G438500 chr3D 548694334 548695672 1338 False 1053.000000 1053 81.332000 370 1701 1 chr3D.!!$F1 1331
2 TraesCS3D01G438500 chr3D 548725514 548726857 1343 False 952.000000 952 80.205000 322 1634 1 chr3D.!!$F3 1312
3 TraesCS3D01G438500 chr3D 458883821 458885959 2138 True 812.000000 1162 81.786000 364 2324 2 chr3D.!!$R5 1960
4 TraesCS3D01G438500 chr3D 549059597 549061919 2322 True 573.000000 994 78.730500 416 2639 2 chr3D.!!$R6 2223
5 TraesCS3D01G438500 chr3D 549462787 549468074 5287 True 472.133333 1066 83.124333 306 2859 3 chr3D.!!$R7 2553
6 TraesCS3D01G438500 chr3B 728509495 728510851 1356 True 1050.000000 1050 81.142000 349 1694 1 chr3B.!!$R2 1345
7 TraesCS3D01G438500 chr3B 727740594 727741934 1340 False 1002.000000 1002 80.657000 368 1701 1 chr3B.!!$F1 1333
8 TraesCS3D01G438500 chr3B 727786482 727787755 1273 False 885.000000 885 79.954000 322 1560 1 chr3B.!!$F2 1238
9 TraesCS3D01G438500 chr3B 605910649 605912628 1979 True 697.000000 952 80.817500 519 2323 2 chr3B.!!$R4 1804
10 TraesCS3D01G438500 chr3B 728888095 728890888 2793 True 631.666667 1303 81.768000 221 2794 3 chr3B.!!$R7 2573
11 TraesCS3D01G438500 chr3B 728802813 728803809 996 True 418.000000 534 90.433667 77 2859 3 chr3B.!!$R6 2782
12 TraesCS3D01G438500 chr3A 686183074 686184412 1338 False 1086.000000 1086 81.691000 370 1701 1 chr3A.!!$F1 1331
13 TraesCS3D01G438500 chr3A 686747635 686749907 2272 True 709.500000 1186 83.284500 314 2338 2 chr3A.!!$R5 2024
14 TraesCS3D01G438500 chr3A 601131518 601134159 2641 True 552.666667 1295 83.061667 196 2639 3 chr3A.!!$R3 2443
15 TraesCS3D01G438500 chr3A 686189649 686191022 1373 False 504.850000 955 90.233000 259 1637 2 chr3A.!!$F2 1378
16 TraesCS3D01G438500 chr3A 686548536 686551698 3162 True 435.333333 544 80.323667 302 2339 3 chr3A.!!$R4 2037
17 TraesCS3D01G438500 chr7B 543187023 543190802 3779 False 695.000000 1197 80.903500 404 2912 2 chr7B.!!$F2 2508

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
625 681 0.108756 GTAGGCGTCGCTCCTTTTCT 60.109 55.0 18.11 6.16 35.21 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2361 6576 0.179037 CATGGACACATCCTGGCGAT 60.179 55.0 0.0 0.0 46.43 4.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 3.582743 GGACGACCGTTTGAAGTCT 57.417 52.632 0.00 0.00 32.86 3.24
27 28 2.712057 GGACGACCGTTTGAAGTCTA 57.288 50.000 0.00 0.00 32.86 2.59
28 29 2.593257 GGACGACCGTTTGAAGTCTAG 58.407 52.381 0.00 0.00 32.86 2.43
29 30 2.227388 GGACGACCGTTTGAAGTCTAGA 59.773 50.000 0.00 0.00 32.86 2.43
30 31 3.490399 GACGACCGTTTGAAGTCTAGAG 58.510 50.000 0.00 0.00 0.00 2.43
31 32 2.883386 ACGACCGTTTGAAGTCTAGAGT 59.117 45.455 0.00 0.00 0.00 3.24
32 33 3.317430 ACGACCGTTTGAAGTCTAGAGTT 59.683 43.478 12.75 12.75 0.00 3.01
33 34 3.669122 CGACCGTTTGAAGTCTAGAGTTG 59.331 47.826 17.62 4.72 0.00 3.16
34 35 3.988517 GACCGTTTGAAGTCTAGAGTTGG 59.011 47.826 17.62 13.57 0.00 3.77
35 36 2.737252 CCGTTTGAAGTCTAGAGTTGGC 59.263 50.000 17.62 4.93 0.00 4.52
36 37 2.737252 CGTTTGAAGTCTAGAGTTGGCC 59.263 50.000 17.62 0.00 0.00 5.36
37 38 3.555168 CGTTTGAAGTCTAGAGTTGGCCT 60.555 47.826 17.62 0.00 0.00 5.19
38 39 4.321750 CGTTTGAAGTCTAGAGTTGGCCTA 60.322 45.833 17.62 0.00 0.00 3.93
39 40 5.172205 GTTTGAAGTCTAGAGTTGGCCTAG 58.828 45.833 17.62 0.00 35.97 3.02
40 41 3.366396 TGAAGTCTAGAGTTGGCCTAGG 58.634 50.000 17.62 3.67 35.50 3.02
41 42 1.783071 AGTCTAGAGTTGGCCTAGGC 58.217 55.000 26.55 26.55 38.70 3.93
51 52 2.754254 GCCTAGGCCCGGGTTTTG 60.754 66.667 24.19 11.38 34.56 2.44
52 53 3.083386 CCTAGGCCCGGGTTTTGA 58.917 61.111 24.63 2.22 0.00 2.69
53 54 1.378119 CCTAGGCCCGGGTTTTGAC 60.378 63.158 24.63 3.18 0.00 3.18
54 55 1.743995 CTAGGCCCGGGTTTTGACG 60.744 63.158 24.63 0.32 0.00 4.35
55 56 3.905437 TAGGCCCGGGTTTTGACGC 62.905 63.158 24.63 4.14 0.00 5.19
57 58 4.337060 GCCCGGGTTTTGACGCAC 62.337 66.667 24.63 0.00 0.00 5.34
58 59 2.902846 CCCGGGTTTTGACGCACA 60.903 61.111 14.18 0.00 0.00 4.57
59 60 2.330041 CCGGGTTTTGACGCACAC 59.670 61.111 0.00 0.00 0.00 3.82
60 61 2.330041 CGGGTTTTGACGCACACC 59.670 61.111 0.00 0.00 0.00 4.16
61 62 2.725641 GGGTTTTGACGCACACCC 59.274 61.111 9.34 9.34 0.00 4.61
62 63 2.725641 GGTTTTGACGCACACCCC 59.274 61.111 0.00 0.00 0.00 4.95
63 64 1.826487 GGTTTTGACGCACACCCCT 60.826 57.895 0.00 0.00 0.00 4.79
64 65 1.358759 GTTTTGACGCACACCCCTG 59.641 57.895 0.00 0.00 0.00 4.45
65 66 2.485795 TTTTGACGCACACCCCTGC 61.486 57.895 0.00 0.00 0.00 4.85
66 67 4.947147 TTGACGCACACCCCTGCC 62.947 66.667 0.00 0.00 33.18 4.85
84 85 2.363795 CGGGCCTCCACCTCTGTA 60.364 66.667 0.84 0.00 0.00 2.74
94 95 4.202090 CCTCCACCTCTGTAAACGTATACC 60.202 50.000 0.00 0.00 0.00 2.73
95 96 3.701040 TCCACCTCTGTAAACGTATACCC 59.299 47.826 0.00 0.00 0.00 3.69
143 144 6.200286 CGTATACAGGATGAAAAATGCGTAGT 59.800 38.462 3.32 0.00 39.69 2.73
208 209 2.635443 CGGCGTCCCCAAAGCAAAT 61.635 57.895 0.00 0.00 33.55 2.32
287 294 2.511600 GACAACGCCATCCTCCCG 60.512 66.667 0.00 0.00 0.00 5.14
299 306 2.783288 CCTCCCGGCCGTCTAGTTC 61.783 68.421 26.12 0.00 0.00 3.01
303 310 1.067582 CCGGCCGTCTAGTTCATCC 59.932 63.158 26.12 0.00 0.00 3.51
305 312 1.721664 CGGCCGTCTAGTTCATCCGA 61.722 60.000 19.50 0.00 37.79 4.55
318 325 1.564818 TCATCCGACCCAGACTAGTCT 59.435 52.381 20.00 20.00 41.37 3.24
362 384 2.222727 AAGAGGAGCTGCACTGCCT 61.223 57.895 8.35 0.00 37.47 4.75
436 489 3.160047 CCTGCCTCTCTGCCGGAT 61.160 66.667 5.05 0.00 37.79 4.18
602 658 1.349026 CTCCACTCCTTGGCTTCTTCA 59.651 52.381 0.00 0.00 46.47 3.02
621 677 3.823330 CGGTAGGCGTCGCTCCTT 61.823 66.667 18.11 3.41 35.21 3.36
625 681 0.108756 GTAGGCGTCGCTCCTTTTCT 60.109 55.000 18.11 6.16 35.21 2.52
636 692 3.796717 CGCTCCTTTTCTTTTGTTCCAAC 59.203 43.478 0.00 0.00 0.00 3.77
695 751 1.469940 CCATTCTTCTCCACGAGGACG 60.470 57.143 0.00 0.00 39.61 4.79
698 754 0.250597 TCTTCTCCACGAGGACGACA 60.251 55.000 0.00 0.00 39.61 4.35
700 756 1.000607 CTTCTCCACGAGGACGACAAA 60.001 52.381 0.00 0.00 39.61 2.83
702 758 1.137513 CTCCACGAGGACGACAAAAC 58.862 55.000 0.00 0.00 39.61 2.43
704 760 1.226030 CCACGAGGACGACAAAACCC 61.226 60.000 0.00 0.00 42.66 4.11
812 871 1.412361 GGCTGATCCTCCCACTAGAGT 60.412 57.143 0.00 0.00 31.53 3.24
828 887 1.227853 AGTTGGACAACGGCCAGAC 60.228 57.895 2.24 0.00 45.50 3.51
888 969 0.178924 AAGGCTGCCATTTCCAGGTT 60.179 50.000 22.65 0.00 0.00 3.50
913 997 2.022195 TGATAGCCCGTGACAGAGTAC 58.978 52.381 0.00 0.00 0.00 2.73
933 1023 4.510038 ACGTACAAGAGTTTCCGTATGT 57.490 40.909 0.00 0.00 30.99 2.29
945 1035 6.338937 AGTTTCCGTATGTCTTTACTCATCC 58.661 40.000 0.00 0.00 0.00 3.51
946 1036 5.925506 TTCCGTATGTCTTTACTCATCCA 57.074 39.130 0.00 0.00 0.00 3.41
1051 1156 2.039879 TCCCTTTCCTGGTTACTTCAGC 59.960 50.000 0.00 0.00 0.00 4.26
1072 1186 3.302935 GCTGCATCGTCAACATGTCATAG 60.303 47.826 0.00 0.00 0.00 2.23
1092 1206 8.821894 GTCATAGTTGAGTTTGATCTGGATAAC 58.178 37.037 0.00 0.00 30.85 1.89
1114 1228 0.459489 GAGCCTAGCTGTGACAGAGG 59.541 60.000 18.18 15.87 39.88 3.69
1116 1230 1.006043 AGCCTAGCTGTGACAGAGGTA 59.994 52.381 18.18 10.70 37.57 3.08
1123 1237 1.344438 CTGTGACAGAGGTACCAGCAA 59.656 52.381 15.94 0.00 32.44 3.91
1139 2243 3.062763 CAGCAACTGTAGAACCTGACTG 58.937 50.000 0.00 0.00 0.00 3.51
1142 2246 3.309388 CAACTGTAGAACCTGACTGTCG 58.691 50.000 2.98 0.00 0.00 4.35
1185 2297 0.901580 AAGATGGTGGGCTTGGCTTG 60.902 55.000 0.00 0.00 0.00 4.01
1191 2303 1.304381 TGGGCTTGGCTTGATCCAC 60.304 57.895 0.00 0.00 35.50 4.02
1192 2304 1.304381 GGGCTTGGCTTGATCCACA 60.304 57.895 0.00 0.00 35.50 4.17
1211 2326 1.335810 CATCTCACAATTCCATGGCCG 59.664 52.381 6.96 0.00 0.00 6.13
1283 2398 8.659925 CTCTACAGAGCTATTGATTTTGATGT 57.340 34.615 4.81 0.00 35.13 3.06
1298 2413 6.395426 TTTTGATGTGCTCAGATCAACTTT 57.605 33.333 18.25 0.00 46.42 2.66
1300 2415 3.681417 TGATGTGCTCAGATCAACTTTCG 59.319 43.478 7.17 0.00 38.03 3.46
1344 2462 0.611714 GGGTTGCCGAGGAGAGTAAA 59.388 55.000 0.00 0.00 0.00 2.01
1351 2469 2.418746 GCCGAGGAGAGTAAAGCAATCA 60.419 50.000 0.00 0.00 0.00 2.57
1357 2475 6.199908 CGAGGAGAGTAAAGCAATCATTGTAG 59.800 42.308 0.00 0.00 0.00 2.74
1430 2548 3.268023 ACTTTCCGATGAATGGTCCTC 57.732 47.619 0.00 0.00 31.64 3.71
1461 2579 7.715657 TCCATTATCCATTTGCATGTTTCTAC 58.284 34.615 0.00 0.00 0.00 2.59
1547 5370 4.795278 GCAGTTAGTTGCTGAAATGCATAC 59.205 41.667 0.00 0.00 43.99 2.39
1586 5409 5.814764 ATGCTGATGATTGAAGTTCAGAC 57.185 39.130 5.56 5.21 38.25 3.51
1612 5441 5.237779 ACATCAATTTTTCCTTTTGCTGCTG 59.762 36.000 0.00 0.00 0.00 4.41
1613 5442 3.560896 TCAATTTTTCCTTTTGCTGCTGC 59.439 39.130 8.89 8.89 40.20 5.25
1626 5455 4.365899 TGCTGCTGCATGAATTCTTTAG 57.634 40.909 14.93 3.02 45.31 1.85
1646 5526 6.877611 TTAGAAGAAAACAGCACTTAAGGG 57.122 37.500 7.53 3.32 0.00 3.95
1687 5584 5.451023 GGTCGTATGCATAAATTGTGTTTCG 59.549 40.000 8.28 3.93 0.00 3.46
1694 5591 8.978564 ATGCATAAATTGTGTTTCGAATGTAA 57.021 26.923 0.00 0.00 0.00 2.41
1708 5809 9.834628 GTTTCGAATGTAATCTTATTTGTTCCA 57.165 29.630 0.00 0.00 0.00 3.53
1751 5852 8.937634 TCGGGTTTACTAAAGATGATTTCTAC 57.062 34.615 0.00 0.00 33.05 2.59
1778 5882 2.066262 TCTTTTCACTCGCGTGGATTC 58.934 47.619 13.32 0.00 41.53 2.52
1784 5888 1.654105 CACTCGCGTGGATTCTGTTAC 59.346 52.381 13.32 0.00 37.50 2.50
1818 5922 0.320771 CTGGACCGTGGTTCTCTTGG 60.321 60.000 0.00 0.00 0.00 3.61
1823 5927 1.028905 CCGTGGTTCTCTTGGCAAAA 58.971 50.000 0.00 0.00 0.00 2.44
1883 5992 0.951040 GCTGAGACCGAACCAACTGG 60.951 60.000 0.00 0.00 42.17 4.00
1888 5997 1.420138 AGACCGAACCAACTGGATGTT 59.580 47.619 1.86 0.00 39.92 2.71
1889 5998 2.158667 AGACCGAACCAACTGGATGTTT 60.159 45.455 1.86 0.00 36.63 2.83
1890 5999 3.071892 AGACCGAACCAACTGGATGTTTA 59.928 43.478 1.86 0.00 36.63 2.01
1891 6000 4.007659 GACCGAACCAACTGGATGTTTAT 58.992 43.478 1.86 0.00 36.63 1.40
1892 6001 4.403734 ACCGAACCAACTGGATGTTTATT 58.596 39.130 1.86 0.00 36.63 1.40
1893 6002 4.830600 ACCGAACCAACTGGATGTTTATTT 59.169 37.500 1.86 0.00 36.63 1.40
1894 6003 5.160641 CCGAACCAACTGGATGTTTATTTG 58.839 41.667 1.86 0.00 36.63 2.32
1895 6004 5.160641 CGAACCAACTGGATGTTTATTTGG 58.839 41.667 1.86 0.00 39.56 3.28
1896 6005 5.048364 CGAACCAACTGGATGTTTATTTGGA 60.048 40.000 1.86 0.00 37.52 3.53
1897 6006 6.350110 CGAACCAACTGGATGTTTATTTGGAT 60.350 38.462 1.86 0.00 37.52 3.41
1898 6007 7.148154 CGAACCAACTGGATGTTTATTTGGATA 60.148 37.037 1.86 0.00 37.52 2.59
1899 6008 7.404671 ACCAACTGGATGTTTATTTGGATAC 57.595 36.000 1.86 0.00 37.52 2.24
1926 6035 6.635030 ACTCTATTCACACTTTTTGAACCC 57.365 37.500 0.00 0.00 35.82 4.11
1928 6037 6.833933 ACTCTATTCACACTTTTTGAACCCTT 59.166 34.615 0.00 0.00 35.82 3.95
1932 6041 5.845391 TCACACTTTTTGAACCCTTAAGG 57.155 39.130 15.14 15.14 43.78 2.69
1947 6056 5.485620 CCCTTAAGGTAGTTACGCTCTTTT 58.514 41.667 20.22 0.00 0.00 2.27
1955 6064 7.336396 AGGTAGTTACGCTCTTTTATTTGGAT 58.664 34.615 0.00 0.00 0.00 3.41
1956 6065 8.480501 AGGTAGTTACGCTCTTTTATTTGGATA 58.519 33.333 0.00 0.00 0.00 2.59
1967 6076 7.826690 TCTTTTATTTGGATACTGAAACCAGC 58.173 34.615 0.00 0.00 35.09 4.85
2018 6128 7.226720 TGTTTTGTTGAGTATCTTCCTGAAGTC 59.773 37.037 6.78 0.00 39.38 3.01
2033 6143 3.149196 TGAAGTCAGGAGTCCATTTTGC 58.851 45.455 12.86 0.00 0.00 3.68
2040 6157 5.473504 GTCAGGAGTCCATTTTGCTTTAGAA 59.526 40.000 12.86 0.00 0.00 2.10
2098 6259 7.501225 AGGTTACAATTACATAACTATGCACCC 59.499 37.037 0.00 0.00 37.19 4.61
2292 6506 7.449704 AGACATGCTAGTATGATGTGATGACTA 59.550 37.037 25.33 0.00 30.39 2.59
2319 6534 3.129813 AGTGACGTAACATTATCGCCTGA 59.870 43.478 5.68 0.00 0.00 3.86
2320 6535 3.861113 GTGACGTAACATTATCGCCTGAA 59.139 43.478 0.00 0.00 0.00 3.02
2321 6536 4.506654 GTGACGTAACATTATCGCCTGAAT 59.493 41.667 0.00 0.00 0.00 2.57
2322 6537 4.506288 TGACGTAACATTATCGCCTGAATG 59.494 41.667 0.00 0.00 38.70 2.67
2323 6538 4.439057 ACGTAACATTATCGCCTGAATGT 58.561 39.130 0.00 0.00 45.86 2.71
2324 6539 4.270084 ACGTAACATTATCGCCTGAATGTG 59.730 41.667 5.74 0.00 43.73 3.21
2325 6540 4.270084 CGTAACATTATCGCCTGAATGTGT 59.730 41.667 5.74 0.00 43.73 3.72
2326 6541 4.882671 AACATTATCGCCTGAATGTGTC 57.117 40.909 5.74 0.00 43.73 3.67
2327 6542 3.206150 ACATTATCGCCTGAATGTGTCC 58.794 45.455 4.45 0.00 43.07 4.02
2328 6543 3.205338 CATTATCGCCTGAATGTGTCCA 58.795 45.455 0.00 0.00 0.00 4.02
2329 6544 3.558931 TTATCGCCTGAATGTGTCCAT 57.441 42.857 0.00 0.00 0.00 3.41
2330 6545 1.671979 ATCGCCTGAATGTGTCCATG 58.328 50.000 0.00 0.00 0.00 3.66
2331 6546 0.392863 TCGCCTGAATGTGTCCATGG 60.393 55.000 4.97 4.97 0.00 3.66
2332 6547 1.378882 CGCCTGAATGTGTCCATGGG 61.379 60.000 13.02 0.00 0.00 4.00
2333 6548 1.039233 GCCTGAATGTGTCCATGGGG 61.039 60.000 13.02 2.45 0.00 4.96
2334 6549 0.625316 CCTGAATGTGTCCATGGGGA 59.375 55.000 13.02 0.00 42.29 4.81
2335 6550 1.409241 CCTGAATGTGTCCATGGGGAG 60.409 57.143 13.02 0.00 46.12 4.30
2336 6551 1.561076 CTGAATGTGTCCATGGGGAGA 59.439 52.381 13.02 0.00 46.12 3.71
2337 6552 2.174210 CTGAATGTGTCCATGGGGAGAT 59.826 50.000 13.02 0.00 46.12 2.75
2338 6553 3.392285 CTGAATGTGTCCATGGGGAGATA 59.608 47.826 13.02 0.00 46.12 1.98
2339 6554 3.785325 TGAATGTGTCCATGGGGAGATAA 59.215 43.478 13.02 0.00 46.12 1.75
2340 6555 3.864789 ATGTGTCCATGGGGAGATAAC 57.135 47.619 13.02 0.71 46.12 1.89
2341 6556 2.845659 TGTGTCCATGGGGAGATAACT 58.154 47.619 13.02 0.00 46.12 2.24
2342 6557 2.505407 TGTGTCCATGGGGAGATAACTG 59.495 50.000 13.02 0.00 46.12 3.16
2343 6558 2.771943 GTGTCCATGGGGAGATAACTGA 59.228 50.000 13.02 0.00 46.12 3.41
2344 6559 3.392616 GTGTCCATGGGGAGATAACTGAT 59.607 47.826 13.02 0.00 46.12 2.90
2345 6560 4.593206 GTGTCCATGGGGAGATAACTGATA 59.407 45.833 13.02 0.00 46.12 2.15
2346 6561 5.071788 GTGTCCATGGGGAGATAACTGATAA 59.928 44.000 13.02 0.00 46.12 1.75
2347 6562 5.307976 TGTCCATGGGGAGATAACTGATAAG 59.692 44.000 13.02 0.00 46.12 1.73
2348 6563 4.846367 TCCATGGGGAGATAACTGATAAGG 59.154 45.833 13.02 0.00 38.64 2.69
2349 6564 4.599241 CCATGGGGAGATAACTGATAAGGT 59.401 45.833 2.85 0.00 35.59 3.50
2350 6565 5.513788 CCATGGGGAGATAACTGATAAGGTG 60.514 48.000 2.85 0.00 35.59 4.00
2351 6566 4.890988 TGGGGAGATAACTGATAAGGTGA 58.109 43.478 0.00 0.00 0.00 4.02
2352 6567 4.654262 TGGGGAGATAACTGATAAGGTGAC 59.346 45.833 0.00 0.00 0.00 3.67
2353 6568 4.262079 GGGGAGATAACTGATAAGGTGACG 60.262 50.000 0.00 0.00 0.00 4.35
2354 6569 4.341520 GGGAGATAACTGATAAGGTGACGT 59.658 45.833 0.00 0.00 0.00 4.34
2355 6570 5.533903 GGGAGATAACTGATAAGGTGACGTA 59.466 44.000 0.00 0.00 0.00 3.57
2356 6571 6.437094 GGAGATAACTGATAAGGTGACGTAC 58.563 44.000 0.00 0.00 0.00 3.67
2367 6582 2.212869 GTGACGTACCATTATCGCCA 57.787 50.000 0.00 0.00 0.00 5.69
2368 6583 2.124903 GTGACGTACCATTATCGCCAG 58.875 52.381 0.00 0.00 0.00 4.85
2423 6659 5.753744 ACAATTTGTTGCTGCATGATTTTG 58.246 33.333 1.84 8.20 0.00 2.44
2433 6669 5.361571 TGCTGCATGATTTTGTCTTATGGAT 59.638 36.000 0.00 0.00 0.00 3.41
2475 6711 7.539034 AATTTGTAAGGCATCCACTACTTTT 57.461 32.000 0.00 0.00 0.00 2.27
2485 6721 6.315642 GGCATCCACTACTTTTCCTAAGTAAC 59.684 42.308 0.00 0.00 32.89 2.50
2522 6764 7.262772 TGTACCGGAACATAAGTAATTCAGAG 58.737 38.462 9.46 0.00 0.00 3.35
2677 8026 3.067011 TCCAGTGAGGATCCGTTGT 57.933 52.632 5.98 0.00 43.07 3.32
2678 8027 0.608130 TCCAGTGAGGATCCGTTGTG 59.392 55.000 5.98 3.22 43.07 3.33
2679 8028 0.391661 CCAGTGAGGATCCGTTGTGG 60.392 60.000 5.98 8.87 41.22 4.17
2681 8030 1.548719 CAGTGAGGATCCGTTGTGGTA 59.451 52.381 5.98 0.00 39.52 3.25
2683 8032 2.431057 AGTGAGGATCCGTTGTGGTATC 59.569 50.000 5.98 0.00 39.52 2.24
2739 8105 5.973565 CAGGAATGAACTGTTTGACTTGTTC 59.026 40.000 0.00 0.00 39.18 3.18
2794 8160 7.406104 AGAGACAGTAATTAAGAAAATGGGCT 58.594 34.615 0.00 0.00 0.00 5.19
2795 8161 7.890655 AGAGACAGTAATTAAGAAAATGGGCTT 59.109 33.333 0.00 0.00 0.00 4.35
2796 8162 8.056407 AGACAGTAATTAAGAAAATGGGCTTC 57.944 34.615 0.00 0.00 0.00 3.86
2797 8163 7.669722 AGACAGTAATTAAGAAAATGGGCTTCA 59.330 33.333 0.00 0.00 0.00 3.02
2832 8233 7.101054 TCAGTGGTTCGTTTGCTTATATAGTT 58.899 34.615 0.00 0.00 0.00 2.24
2839 8240 7.213252 TCGTTTGCTTATATAGTTGACGAAC 57.787 36.000 0.00 0.00 33.62 3.95
2844 8245 6.636705 TGCTTATATAGTTGACGAACTGGTT 58.363 36.000 0.00 0.00 42.66 3.67
2845 8246 6.755141 TGCTTATATAGTTGACGAACTGGTTC 59.245 38.462 3.62 3.62 42.66 3.62
2860 8261 0.109597 GGTTCGTTTGCTCATGCTGG 60.110 55.000 0.00 0.00 40.48 4.85
2876 8277 3.295093 TGCTGGAAACAACAGAATCCAA 58.705 40.909 0.00 0.00 41.20 3.53
2879 8280 4.441356 GCTGGAAACAACAGAATCCAAACA 60.441 41.667 0.00 0.00 41.20 2.83
2892 8293 4.796038 ATCCAAACATTTTCAGAGGCTG 57.204 40.909 0.00 0.00 0.00 4.85
2898 8299 3.837355 ACATTTTCAGAGGCTGGTTTCT 58.163 40.909 0.00 0.00 31.51 2.52
2912 8313 3.511477 TGGTTTCTCTCTCTGCCTACTT 58.489 45.455 0.00 0.00 0.00 2.24
2913 8314 4.673968 TGGTTTCTCTCTCTGCCTACTTA 58.326 43.478 0.00 0.00 0.00 2.24
2914 8315 4.463186 TGGTTTCTCTCTCTGCCTACTTAC 59.537 45.833 0.00 0.00 0.00 2.34
2915 8316 4.707934 GGTTTCTCTCTCTGCCTACTTACT 59.292 45.833 0.00 0.00 0.00 2.24
2916 8317 5.887035 GGTTTCTCTCTCTGCCTACTTACTA 59.113 44.000 0.00 0.00 0.00 1.82
2917 8318 6.038936 GGTTTCTCTCTCTGCCTACTTACTAG 59.961 46.154 0.00 0.00 0.00 2.57
2918 8319 4.710324 TCTCTCTCTGCCTACTTACTAGC 58.290 47.826 0.00 0.00 0.00 3.42
2919 8320 3.468770 TCTCTCTGCCTACTTACTAGCG 58.531 50.000 0.00 0.00 0.00 4.26
2920 8321 2.550606 CTCTCTGCCTACTTACTAGCGG 59.449 54.545 0.00 0.00 0.00 5.52
2921 8322 1.609555 CTCTGCCTACTTACTAGCGGG 59.390 57.143 0.00 0.00 32.35 6.13
2922 8323 0.032267 CTGCCTACTTACTAGCGGGC 59.968 60.000 0.00 0.00 40.53 6.13
2923 8324 0.685131 TGCCTACTTACTAGCGGGCA 60.685 55.000 0.00 0.00 44.52 5.36
2924 8325 0.462789 GCCTACTTACTAGCGGGCAA 59.537 55.000 0.00 0.00 40.14 4.52
2925 8326 1.134610 GCCTACTTACTAGCGGGCAAA 60.135 52.381 0.00 0.00 40.14 3.68
2926 8327 2.484947 GCCTACTTACTAGCGGGCAAAT 60.485 50.000 0.00 0.00 40.14 2.32
2927 8328 3.243975 GCCTACTTACTAGCGGGCAAATA 60.244 47.826 0.00 0.00 40.14 1.40
2928 8329 4.557205 CCTACTTACTAGCGGGCAAATAG 58.443 47.826 0.00 0.00 0.00 1.73
2929 8330 2.835027 ACTTACTAGCGGGCAAATAGC 58.165 47.619 0.00 0.00 44.65 2.97
2930 8331 2.434702 ACTTACTAGCGGGCAAATAGCT 59.565 45.455 0.00 0.00 44.79 3.32
2931 8332 2.814280 TACTAGCGGGCAAATAGCTC 57.186 50.000 0.00 0.00 44.79 4.09
2932 8333 0.106894 ACTAGCGGGCAAATAGCTCC 59.893 55.000 0.00 0.00 42.29 4.70
2933 8334 0.603975 CTAGCGGGCAAATAGCTCCC 60.604 60.000 0.00 0.00 42.29 4.30
2934 8335 1.341913 TAGCGGGCAAATAGCTCCCA 61.342 55.000 8.10 0.00 42.29 4.37
2935 8336 1.529244 GCGGGCAAATAGCTCCCAT 60.529 57.895 8.10 0.00 42.29 4.00
2936 8337 1.799258 GCGGGCAAATAGCTCCCATG 61.799 60.000 8.10 0.00 42.29 3.66
2937 8338 0.466189 CGGGCAAATAGCTCCCATGT 60.466 55.000 8.10 0.00 42.29 3.21
2938 8339 1.035139 GGGCAAATAGCTCCCATGTG 58.965 55.000 2.53 0.00 44.79 3.21
2939 8340 1.410083 GGGCAAATAGCTCCCATGTGA 60.410 52.381 2.53 0.00 44.79 3.58
2940 8341 1.678101 GGCAAATAGCTCCCATGTGAC 59.322 52.381 0.00 0.00 44.79 3.67
2941 8342 2.368439 GCAAATAGCTCCCATGTGACA 58.632 47.619 0.00 0.00 41.15 3.58
2942 8343 2.954318 GCAAATAGCTCCCATGTGACAT 59.046 45.455 0.00 0.00 41.15 3.06
2943 8344 3.004106 GCAAATAGCTCCCATGTGACATC 59.996 47.826 0.00 0.00 41.15 3.06
2944 8345 2.827800 ATAGCTCCCATGTGACATCG 57.172 50.000 0.00 0.00 0.00 3.84
2945 8346 1.485124 TAGCTCCCATGTGACATCGT 58.515 50.000 0.00 0.00 0.00 3.73
2946 8347 0.615331 AGCTCCCATGTGACATCGTT 59.385 50.000 0.00 0.00 0.00 3.85
2947 8348 0.729116 GCTCCCATGTGACATCGTTG 59.271 55.000 0.00 0.00 0.00 4.10
2948 8349 1.675714 GCTCCCATGTGACATCGTTGA 60.676 52.381 0.00 0.00 0.00 3.18
2949 8350 2.274437 CTCCCATGTGACATCGTTGAG 58.726 52.381 0.00 0.00 0.00 3.02
2950 8351 1.623311 TCCCATGTGACATCGTTGAGT 59.377 47.619 0.00 0.00 0.00 3.41
2951 8352 2.038426 TCCCATGTGACATCGTTGAGTT 59.962 45.455 0.00 0.00 0.00 3.01
2952 8353 2.160219 CCCATGTGACATCGTTGAGTTG 59.840 50.000 0.00 0.00 0.00 3.16
2953 8354 3.066380 CCATGTGACATCGTTGAGTTGA 58.934 45.455 0.00 0.00 0.00 3.18
2954 8355 3.498018 CCATGTGACATCGTTGAGTTGAA 59.502 43.478 0.00 0.00 0.00 2.69
2955 8356 4.154737 CCATGTGACATCGTTGAGTTGAAT 59.845 41.667 0.00 0.00 0.00 2.57
2956 8357 5.335113 CCATGTGACATCGTTGAGTTGAATT 60.335 40.000 0.00 0.00 0.00 2.17
2957 8358 5.094429 TGTGACATCGTTGAGTTGAATTG 57.906 39.130 0.00 0.00 0.00 2.32
2958 8359 4.574421 TGTGACATCGTTGAGTTGAATTGT 59.426 37.500 0.00 0.00 0.00 2.71
2959 8360 5.140177 GTGACATCGTTGAGTTGAATTGTC 58.860 41.667 0.00 0.00 34.33 3.18
2960 8361 4.213270 TGACATCGTTGAGTTGAATTGTCC 59.787 41.667 0.00 0.00 33.12 4.02
2961 8362 4.133820 ACATCGTTGAGTTGAATTGTCCA 58.866 39.130 0.00 0.00 0.00 4.02
2962 8363 4.578516 ACATCGTTGAGTTGAATTGTCCAA 59.421 37.500 0.00 0.00 0.00 3.53
2963 8364 5.067153 ACATCGTTGAGTTGAATTGTCCAAA 59.933 36.000 0.00 0.00 0.00 3.28
2964 8365 5.168526 TCGTTGAGTTGAATTGTCCAAAG 57.831 39.130 0.00 0.00 0.00 2.77
2965 8366 4.878971 TCGTTGAGTTGAATTGTCCAAAGA 59.121 37.500 0.00 0.00 0.00 2.52
2966 8367 5.355630 TCGTTGAGTTGAATTGTCCAAAGAA 59.644 36.000 0.00 0.00 0.00 2.52
2967 8368 5.455525 CGTTGAGTTGAATTGTCCAAAGAAC 59.544 40.000 0.00 0.00 0.00 3.01
2968 8369 5.168526 TGAGTTGAATTGTCCAAAGAACG 57.831 39.130 0.00 0.00 0.00 3.95
2969 8370 4.878971 TGAGTTGAATTGTCCAAAGAACGA 59.121 37.500 0.00 0.00 0.00 3.85
2970 8371 5.169836 AGTTGAATTGTCCAAAGAACGAC 57.830 39.130 0.00 0.00 0.00 4.34
2971 8372 3.870723 TGAATTGTCCAAAGAACGACG 57.129 42.857 0.00 0.00 0.00 5.12
2972 8373 3.199677 TGAATTGTCCAAAGAACGACGT 58.800 40.909 0.00 0.00 0.00 4.34
2973 8374 3.246699 TGAATTGTCCAAAGAACGACGTC 59.753 43.478 5.18 5.18 0.00 4.34
2974 8375 1.202203 TTGTCCAAAGAACGACGTCG 58.798 50.000 34.58 34.58 46.33 5.12
2986 8387 1.932160 CGACGTCGTTGGTTCAAATG 58.068 50.000 29.08 0.00 34.11 2.32
2987 8388 1.397945 CGACGTCGTTGGTTCAAATGG 60.398 52.381 29.08 0.00 34.11 3.16
2988 8389 0.309612 ACGTCGTTGGTTCAAATGGC 59.690 50.000 0.00 0.00 0.00 4.40
2989 8390 0.591170 CGTCGTTGGTTCAAATGGCT 59.409 50.000 0.00 0.00 0.00 4.75
2990 8391 1.399727 CGTCGTTGGTTCAAATGGCTC 60.400 52.381 0.00 0.00 0.00 4.70
2991 8392 1.880027 GTCGTTGGTTCAAATGGCTCT 59.120 47.619 0.00 0.00 0.00 4.09
2992 8393 2.095718 GTCGTTGGTTCAAATGGCTCTC 60.096 50.000 0.00 0.00 0.00 3.20
2993 8394 1.879380 CGTTGGTTCAAATGGCTCTCA 59.121 47.619 0.00 0.00 0.00 3.27
2994 8395 2.489329 CGTTGGTTCAAATGGCTCTCAT 59.511 45.455 0.00 0.00 37.79 2.90
2995 8396 3.671433 CGTTGGTTCAAATGGCTCTCATG 60.671 47.826 0.00 0.00 35.99 3.07
2996 8397 1.820519 TGGTTCAAATGGCTCTCATGC 59.179 47.619 0.00 0.00 35.99 4.06
2997 8398 1.202222 GGTTCAAATGGCTCTCATGCG 60.202 52.381 0.00 0.00 35.99 4.73
2998 8399 1.739466 GTTCAAATGGCTCTCATGCGA 59.261 47.619 0.00 0.00 35.99 5.10
2999 8400 1.372582 TCAAATGGCTCTCATGCGAC 58.627 50.000 0.00 0.00 35.99 5.19
3000 8401 1.089112 CAAATGGCTCTCATGCGACA 58.911 50.000 0.00 0.00 35.99 4.35
3001 8402 1.674441 CAAATGGCTCTCATGCGACAT 59.326 47.619 0.00 0.00 35.99 3.06
3002 8403 1.590932 AATGGCTCTCATGCGACATC 58.409 50.000 0.00 0.00 35.99 3.06
3003 8404 0.757512 ATGGCTCTCATGCGACATCT 59.242 50.000 0.00 0.00 34.22 2.90
3004 8405 0.179092 TGGCTCTCATGCGACATCTG 60.179 55.000 0.00 0.00 0.00 2.90
3005 8406 1.497223 GGCTCTCATGCGACATCTGC 61.497 60.000 0.00 0.00 0.00 4.26
3006 8407 1.819226 GCTCTCATGCGACATCTGCG 61.819 60.000 0.00 0.00 34.24 5.18
3007 8408 0.527169 CTCTCATGCGACATCTGCGT 60.527 55.000 0.00 0.00 34.24 5.24
3008 8409 0.108662 TCTCATGCGACATCTGCGTT 60.109 50.000 0.00 0.00 34.24 4.84
3009 8410 0.025898 CTCATGCGACATCTGCGTTG 59.974 55.000 0.00 0.00 34.24 4.10
3010 8411 1.061411 CATGCGACATCTGCGTTGG 59.939 57.895 0.00 0.00 34.24 3.77
3011 8412 1.079197 ATGCGACATCTGCGTTGGA 60.079 52.632 0.00 0.00 34.24 3.53
3012 8413 0.673333 ATGCGACATCTGCGTTGGAA 60.673 50.000 0.00 0.00 34.24 3.53
3013 8414 0.882484 TGCGACATCTGCGTTGGAAA 60.882 50.000 0.00 0.00 34.24 3.13
3014 8415 0.237235 GCGACATCTGCGTTGGAAAA 59.763 50.000 0.00 0.00 0.00 2.29
3015 8416 1.334599 GCGACATCTGCGTTGGAAAAA 60.335 47.619 0.00 0.00 0.00 1.94
3030 8431 2.550487 AAAAATAGCTGCCGTGCGA 58.450 47.368 0.00 0.00 38.13 5.10
3031 8432 0.168128 AAAAATAGCTGCCGTGCGAC 59.832 50.000 0.00 0.00 38.13 5.19
3032 8433 0.953471 AAAATAGCTGCCGTGCGACA 60.953 50.000 0.00 0.00 38.13 4.35
3033 8434 1.635663 AAATAGCTGCCGTGCGACAC 61.636 55.000 0.00 0.00 38.13 3.67
3034 8435 2.507110 AATAGCTGCCGTGCGACACT 62.507 55.000 0.00 0.00 38.13 3.55
3035 8436 3.914605 TAGCTGCCGTGCGACACTG 62.915 63.158 0.00 3.45 38.13 3.66
3042 8443 2.048222 GTGCGACACTGCTGCCTA 60.048 61.111 0.00 0.00 35.36 3.93
3043 8444 1.667830 GTGCGACACTGCTGCCTAA 60.668 57.895 0.00 0.00 35.36 2.69
3044 8445 1.021390 GTGCGACACTGCTGCCTAAT 61.021 55.000 0.00 0.00 35.36 1.73
3045 8446 0.740868 TGCGACACTGCTGCCTAATC 60.741 55.000 0.00 0.00 35.36 1.75
3046 8447 1.432270 GCGACACTGCTGCCTAATCC 61.432 60.000 0.00 0.00 0.00 3.01
3047 8448 0.108186 CGACACTGCTGCCTAATCCA 60.108 55.000 0.00 0.00 0.00 3.41
3048 8449 1.675714 CGACACTGCTGCCTAATCCAA 60.676 52.381 0.00 0.00 0.00 3.53
3049 8450 2.436417 GACACTGCTGCCTAATCCAAA 58.564 47.619 0.00 0.00 0.00 3.28
3050 8451 2.421424 GACACTGCTGCCTAATCCAAAG 59.579 50.000 0.00 0.00 0.00 2.77
3051 8452 2.040278 ACACTGCTGCCTAATCCAAAGA 59.960 45.455 0.00 0.00 0.00 2.52
3052 8453 2.421424 CACTGCTGCCTAATCCAAAGAC 59.579 50.000 0.00 0.00 0.00 3.01
3053 8454 2.040278 ACTGCTGCCTAATCCAAAGACA 59.960 45.455 0.00 0.00 0.00 3.41
3054 8455 2.421424 CTGCTGCCTAATCCAAAGACAC 59.579 50.000 0.00 0.00 0.00 3.67
3055 8456 2.224744 TGCTGCCTAATCCAAAGACACA 60.225 45.455 0.00 0.00 0.00 3.72
3056 8457 3.019564 GCTGCCTAATCCAAAGACACAT 58.980 45.455 0.00 0.00 0.00 3.21
3057 8458 3.181493 GCTGCCTAATCCAAAGACACATG 60.181 47.826 0.00 0.00 0.00 3.21
3058 8459 4.012374 CTGCCTAATCCAAAGACACATGT 58.988 43.478 0.00 0.00 0.00 3.21
3059 8460 4.406456 TGCCTAATCCAAAGACACATGTT 58.594 39.130 0.00 0.00 0.00 2.71
3060 8461 4.832266 TGCCTAATCCAAAGACACATGTTT 59.168 37.500 0.00 0.00 0.00 2.83
3061 8462 6.007076 TGCCTAATCCAAAGACACATGTTTA 58.993 36.000 0.00 0.00 0.00 2.01
3062 8463 6.491745 TGCCTAATCCAAAGACACATGTTTAA 59.508 34.615 0.00 0.00 0.00 1.52
3063 8464 7.014711 TGCCTAATCCAAAGACACATGTTTAAA 59.985 33.333 0.00 0.00 0.00 1.52
3064 8465 7.870445 GCCTAATCCAAAGACACATGTTTAAAA 59.130 33.333 0.00 0.00 0.00 1.52
3065 8466 9.191995 CCTAATCCAAAGACACATGTTTAAAAC 57.808 33.333 0.00 0.00 0.00 2.43
3066 8467 9.965824 CTAATCCAAAGACACATGTTTAAAACT 57.034 29.630 0.00 0.00 0.00 2.66
3067 8468 8.871686 AATCCAAAGACACATGTTTAAAACTC 57.128 30.769 0.00 0.00 0.00 3.01
3068 8469 6.491394 TCCAAAGACACATGTTTAAAACTCG 58.509 36.000 0.00 0.00 0.00 4.18
3069 8470 6.316640 TCCAAAGACACATGTTTAAAACTCGA 59.683 34.615 0.00 0.00 0.00 4.04
3070 8471 6.970043 CCAAAGACACATGTTTAAAACTCGAA 59.030 34.615 0.00 0.00 0.00 3.71
3071 8472 7.647715 CCAAAGACACATGTTTAAAACTCGAAT 59.352 33.333 0.00 0.00 0.00 3.34
3072 8473 8.682016 CAAAGACACATGTTTAAAACTCGAATC 58.318 33.333 0.00 0.00 0.00 2.52
3073 8474 7.490962 AGACACATGTTTAAAACTCGAATCA 57.509 32.000 0.00 0.00 0.00 2.57
3074 8475 7.576236 AGACACATGTTTAAAACTCGAATCAG 58.424 34.615 0.00 0.00 0.00 2.90
3075 8476 6.668323 ACACATGTTTAAAACTCGAATCAGG 58.332 36.000 0.00 0.00 0.00 3.86
3076 8477 6.262273 ACACATGTTTAAAACTCGAATCAGGT 59.738 34.615 0.00 0.00 0.00 4.00
3077 8478 6.578545 CACATGTTTAAAACTCGAATCAGGTG 59.421 38.462 0.00 0.00 33.44 4.00
3078 8479 6.485313 ACATGTTTAAAACTCGAATCAGGTGA 59.515 34.615 0.00 0.00 0.00 4.02
3079 8480 6.539649 TGTTTAAAACTCGAATCAGGTGAG 57.460 37.500 0.00 0.00 35.85 3.51
3080 8481 5.049680 TGTTTAAAACTCGAATCAGGTGAGC 60.050 40.000 0.00 0.00 32.98 4.26
3081 8482 1.714794 AAACTCGAATCAGGTGAGCG 58.285 50.000 0.00 0.08 32.98 5.03
3082 8483 0.108615 AACTCGAATCAGGTGAGCGG 60.109 55.000 5.52 0.98 32.98 5.52
3083 8484 1.227089 CTCGAATCAGGTGAGCGGG 60.227 63.158 5.52 0.00 0.00 6.13
3084 8485 1.667154 CTCGAATCAGGTGAGCGGGA 61.667 60.000 0.00 0.00 30.82 5.14
3085 8486 1.519455 CGAATCAGGTGAGCGGGAC 60.519 63.158 0.00 0.00 0.00 4.46
3086 8487 1.153349 GAATCAGGTGAGCGGGACC 60.153 63.158 0.00 0.00 0.00 4.46
3087 8488 2.595009 GAATCAGGTGAGCGGGACCC 62.595 65.000 0.00 0.00 33.51 4.46
3088 8489 3.924013 ATCAGGTGAGCGGGACCCA 62.924 63.158 12.15 0.00 33.51 4.51
3089 8490 4.394712 CAGGTGAGCGGGACCCAC 62.395 72.222 12.15 0.00 33.51 4.61
3090 8491 4.954118 AGGTGAGCGGGACCCACA 62.954 66.667 12.15 4.61 33.51 4.17
3091 8492 4.394712 GGTGAGCGGGACCCACAG 62.395 72.222 12.15 0.00 32.79 3.66
3114 8515 3.208570 TGGGACCCACTAACTTATCCA 57.791 47.619 9.95 0.00 0.00 3.41
3115 8516 3.112263 TGGGACCCACTAACTTATCCAG 58.888 50.000 9.95 0.00 0.00 3.86
3116 8517 2.158798 GGGACCCACTAACTTATCCAGC 60.159 54.545 5.33 0.00 0.00 4.85
3117 8518 2.772515 GGACCCACTAACTTATCCAGCT 59.227 50.000 0.00 0.00 0.00 4.24
3118 8519 3.181464 GGACCCACTAACTTATCCAGCTC 60.181 52.174 0.00 0.00 0.00 4.09
3119 8520 3.450904 ACCCACTAACTTATCCAGCTCA 58.549 45.455 0.00 0.00 0.00 4.26
3120 8521 3.452627 ACCCACTAACTTATCCAGCTCAG 59.547 47.826 0.00 0.00 0.00 3.35
3121 8522 3.452627 CCCACTAACTTATCCAGCTCAGT 59.547 47.826 0.00 0.00 0.00 3.41
3122 8523 4.649674 CCCACTAACTTATCCAGCTCAGTA 59.350 45.833 0.00 0.00 0.00 2.74
3123 8524 5.305644 CCCACTAACTTATCCAGCTCAGTAT 59.694 44.000 0.00 0.00 0.00 2.12
3124 8525 6.183361 CCCACTAACTTATCCAGCTCAGTATT 60.183 42.308 0.00 0.00 0.00 1.89
3125 8526 6.703607 CCACTAACTTATCCAGCTCAGTATTG 59.296 42.308 0.00 0.00 0.00 1.90
3126 8527 6.703607 CACTAACTTATCCAGCTCAGTATTGG 59.296 42.308 0.00 0.00 0.00 3.16
3127 8528 5.700402 AACTTATCCAGCTCAGTATTGGT 57.300 39.130 0.00 0.00 33.65 3.67
3128 8529 5.283457 ACTTATCCAGCTCAGTATTGGTC 57.717 43.478 0.00 0.00 33.65 4.02
3129 8530 4.716784 ACTTATCCAGCTCAGTATTGGTCA 59.283 41.667 0.00 0.00 33.65 4.02
3130 8531 3.834489 ATCCAGCTCAGTATTGGTCAG 57.166 47.619 0.00 0.00 33.65 3.51
3131 8532 1.833630 TCCAGCTCAGTATTGGTCAGG 59.166 52.381 0.00 0.00 33.65 3.86
3132 8533 1.556911 CCAGCTCAGTATTGGTCAGGT 59.443 52.381 0.00 0.00 0.00 4.00
3133 8534 2.625737 CAGCTCAGTATTGGTCAGGTG 58.374 52.381 0.00 0.00 0.00 4.00
3134 8535 2.234661 CAGCTCAGTATTGGTCAGGTGA 59.765 50.000 0.09 0.00 35.09 4.02
3135 8536 2.499289 AGCTCAGTATTGGTCAGGTGAG 59.501 50.000 0.00 0.00 35.54 3.51
3136 8537 2.898705 CTCAGTATTGGTCAGGTGAGC 58.101 52.381 2.12 2.12 42.48 4.26
3137 8538 1.204704 TCAGTATTGGTCAGGTGAGCG 59.795 52.381 4.80 0.00 44.88 5.03
3138 8539 0.537188 AGTATTGGTCAGGTGAGCGG 59.463 55.000 4.80 0.00 44.88 5.52
3139 8540 0.462047 GTATTGGTCAGGTGAGCGGG 60.462 60.000 4.80 0.00 44.88 6.13
3140 8541 0.616395 TATTGGTCAGGTGAGCGGGA 60.616 55.000 4.80 0.00 44.88 5.14
3141 8542 2.185310 ATTGGTCAGGTGAGCGGGAC 62.185 60.000 4.80 1.75 44.88 4.46
3142 8543 4.083862 GGTCAGGTGAGCGGGACC 62.084 72.222 11.56 11.56 42.60 4.46
3143 8544 4.083862 GTCAGGTGAGCGGGACCC 62.084 72.222 0.00 0.00 33.51 4.46
3144 8545 4.631740 TCAGGTGAGCGGGACCCA 62.632 66.667 12.15 0.00 33.51 4.51
3145 8546 4.394712 CAGGTGAGCGGGACCCAC 62.395 72.222 12.15 0.00 33.51 4.61
3146 8547 4.954118 AGGTGAGCGGGACCCACA 62.954 66.667 12.15 4.61 33.51 4.17
3147 8548 4.394712 GGTGAGCGGGACCCACAG 62.395 72.222 12.15 0.00 32.79 3.66
3148 8549 3.626924 GTGAGCGGGACCCACAGT 61.627 66.667 12.15 0.00 0.00 3.55
3149 8550 3.625897 TGAGCGGGACCCACAGTG 61.626 66.667 12.15 0.00 0.00 3.66
3150 8551 3.626924 GAGCGGGACCCACAGTGT 61.627 66.667 12.15 0.00 0.00 3.55
3151 8552 3.883744 GAGCGGGACCCACAGTGTG 62.884 68.421 16.70 16.70 0.00 3.82
3170 8571 3.208570 TGGGACCCACTAACTTATCCA 57.791 47.619 9.95 0.00 0.00 3.41
3171 8572 3.112263 TGGGACCCACTAACTTATCCAG 58.888 50.000 9.95 0.00 0.00 3.86
3172 8573 2.158798 GGGACCCACTAACTTATCCAGC 60.159 54.545 5.33 0.00 0.00 4.85
3173 8574 2.772515 GGACCCACTAACTTATCCAGCT 59.227 50.000 0.00 0.00 0.00 4.24
3174 8575 3.181464 GGACCCACTAACTTATCCAGCTC 60.181 52.174 0.00 0.00 0.00 4.09
3175 8576 3.450904 ACCCACTAACTTATCCAGCTCA 58.549 45.455 0.00 0.00 0.00 4.26
3176 8577 3.452627 ACCCACTAACTTATCCAGCTCAG 59.547 47.826 0.00 0.00 0.00 3.35
3177 8578 3.462021 CCACTAACTTATCCAGCTCAGC 58.538 50.000 0.00 0.00 0.00 4.26
3178 8579 3.118629 CCACTAACTTATCCAGCTCAGCA 60.119 47.826 0.00 0.00 0.00 4.41
3179 8580 4.444022 CCACTAACTTATCCAGCTCAGCAT 60.444 45.833 0.00 0.00 0.00 3.79
3180 8581 5.121811 CACTAACTTATCCAGCTCAGCATT 58.878 41.667 0.00 0.00 0.00 3.56
3181 8582 5.007430 CACTAACTTATCCAGCTCAGCATTG 59.993 44.000 0.00 0.00 0.00 2.82
3182 8583 2.928334 ACTTATCCAGCTCAGCATTGG 58.072 47.619 0.00 0.00 0.00 3.16
3183 8584 2.240667 ACTTATCCAGCTCAGCATTGGT 59.759 45.455 0.00 0.00 33.65 3.67
3184 8585 3.455910 ACTTATCCAGCTCAGCATTGGTA 59.544 43.478 0.00 0.00 33.65 3.25
3185 8586 2.338577 ATCCAGCTCAGCATTGGTAC 57.661 50.000 0.00 0.00 33.65 3.34
3186 8587 0.983467 TCCAGCTCAGCATTGGTACA 59.017 50.000 0.00 0.00 33.65 2.90
3199 8600 1.254026 TGGTACAAGAGAGGACACCG 58.746 55.000 0.00 0.00 31.92 4.94
3200 8601 1.202964 TGGTACAAGAGAGGACACCGA 60.203 52.381 0.00 0.00 31.92 4.69
3201 8602 1.473278 GGTACAAGAGAGGACACCGAG 59.527 57.143 0.00 0.00 0.00 4.63
3202 8603 1.135344 GTACAAGAGAGGACACCGAGC 60.135 57.143 0.00 0.00 0.00 5.03
3203 8604 0.540830 ACAAGAGAGGACACCGAGCT 60.541 55.000 0.00 0.00 0.00 4.09
3204 8605 0.108898 CAAGAGAGGACACCGAGCTG 60.109 60.000 0.00 0.00 0.00 4.24
3205 8606 0.540830 AAGAGAGGACACCGAGCTGT 60.541 55.000 0.00 0.00 0.00 4.40
3206 8607 1.214062 GAGAGGACACCGAGCTGTG 59.786 63.158 0.00 0.00 42.05 3.66
3207 8608 2.433318 GAGGACACCGAGCTGTGC 60.433 66.667 4.18 0.00 39.93 4.57
3208 8609 3.941657 GAGGACACCGAGCTGTGCC 62.942 68.421 4.18 6.78 39.93 5.01
3215 8616 4.803426 CGAGCTGTGCCCCGAGTC 62.803 72.222 0.00 0.00 0.00 3.36
3216 8617 4.803426 GAGCTGTGCCCCGAGTCG 62.803 72.222 5.29 5.29 0.00 4.18
3228 8629 4.357947 GAGTCGTGCAGCACCCGA 62.358 66.667 20.16 11.96 0.00 5.14
3229 8630 4.363990 AGTCGTGCAGCACCCGAG 62.364 66.667 20.16 5.88 0.00 4.63
3235 8636 4.840005 GCAGCACCCGAGCCCTAC 62.840 72.222 0.00 0.00 34.23 3.18
3236 8637 4.162690 CAGCACCCGAGCCCTACC 62.163 72.222 0.00 0.00 34.23 3.18
3239 8640 4.143333 CACCCGAGCCCTACCGTG 62.143 72.222 0.00 0.00 0.00 4.94
3240 8641 4.371417 ACCCGAGCCCTACCGTGA 62.371 66.667 0.00 0.00 0.00 4.35
3241 8642 3.834799 CCCGAGCCCTACCGTGAC 61.835 72.222 0.00 0.00 0.00 3.67
3242 8643 2.754658 CCGAGCCCTACCGTGACT 60.755 66.667 0.00 0.00 0.00 3.41
3243 8644 2.348888 CCGAGCCCTACCGTGACTT 61.349 63.158 0.00 0.00 0.00 3.01
3244 8645 1.139095 CGAGCCCTACCGTGACTTC 59.861 63.158 0.00 0.00 0.00 3.01
3245 8646 1.516423 GAGCCCTACCGTGACTTCC 59.484 63.158 0.00 0.00 0.00 3.46
3246 8647 1.957765 GAGCCCTACCGTGACTTCCC 61.958 65.000 0.00 0.00 0.00 3.97
3247 8648 2.288025 GCCCTACCGTGACTTCCCA 61.288 63.158 0.00 0.00 0.00 4.37
3248 8649 1.623542 GCCCTACCGTGACTTCCCAT 61.624 60.000 0.00 0.00 0.00 4.00
3249 8650 0.464452 CCCTACCGTGACTTCCCATC 59.536 60.000 0.00 0.00 0.00 3.51
3250 8651 0.464452 CCTACCGTGACTTCCCATCC 59.536 60.000 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 2.227388 TCTAGACTTCAAACGGTCGTCC 59.773 50.000 0.00 0.00 37.52 4.79
9 10 3.058363 ACTCTAGACTTCAAACGGTCGTC 60.058 47.826 0.00 0.00 37.52 4.20
10 11 2.883386 ACTCTAGACTTCAAACGGTCGT 59.117 45.455 0.00 0.00 37.52 4.34
11 12 3.555917 ACTCTAGACTTCAAACGGTCG 57.444 47.619 0.00 0.00 37.52 4.79
12 13 3.988517 CCAACTCTAGACTTCAAACGGTC 59.011 47.826 0.00 0.00 0.00 4.79
13 14 3.802675 GCCAACTCTAGACTTCAAACGGT 60.803 47.826 0.00 0.00 0.00 4.83
14 15 2.737252 GCCAACTCTAGACTTCAAACGG 59.263 50.000 0.00 0.00 0.00 4.44
15 16 2.737252 GGCCAACTCTAGACTTCAAACG 59.263 50.000 0.00 0.00 0.00 3.60
16 17 4.009370 AGGCCAACTCTAGACTTCAAAC 57.991 45.455 5.01 0.00 0.00 2.93
17 18 4.223032 CCTAGGCCAACTCTAGACTTCAAA 59.777 45.833 5.01 0.00 37.08 2.69
18 19 3.769844 CCTAGGCCAACTCTAGACTTCAA 59.230 47.826 5.01 0.00 37.08 2.69
19 20 3.366396 CCTAGGCCAACTCTAGACTTCA 58.634 50.000 5.01 0.00 37.08 3.02
20 21 2.101750 GCCTAGGCCAACTCTAGACTTC 59.898 54.545 24.19 0.00 37.08 3.01
21 22 2.112190 GCCTAGGCCAACTCTAGACTT 58.888 52.381 24.19 0.00 37.08 3.01
22 23 1.783071 GCCTAGGCCAACTCTAGACT 58.217 55.000 24.19 0.00 37.08 3.24
34 35 2.754254 CAAAACCCGGGCCTAGGC 60.754 66.667 26.55 26.55 41.06 3.93
35 36 1.378119 GTCAAAACCCGGGCCTAGG 60.378 63.158 24.08 3.67 0.00 3.02
36 37 1.743995 CGTCAAAACCCGGGCCTAG 60.744 63.158 24.08 9.06 0.00 3.02
37 38 2.348243 CGTCAAAACCCGGGCCTA 59.652 61.111 24.08 0.00 0.00 3.93
40 41 4.337060 GTGCGTCAAAACCCGGGC 62.337 66.667 24.08 3.84 0.00 6.13
41 42 2.902846 TGTGCGTCAAAACCCGGG 60.903 61.111 22.25 22.25 0.00 5.73
42 43 2.330041 GTGTGCGTCAAAACCCGG 59.670 61.111 0.00 0.00 0.00 5.73
43 44 2.330041 GGTGTGCGTCAAAACCCG 59.670 61.111 0.00 0.00 0.00 5.28
44 45 2.725641 GGGTGTGCGTCAAAACCC 59.274 61.111 12.84 12.84 45.29 4.11
45 46 1.826487 AGGGGTGTGCGTCAAAACC 60.826 57.895 0.00 0.00 0.00 3.27
46 47 1.358759 CAGGGGTGTGCGTCAAAAC 59.641 57.895 0.00 0.00 0.00 2.43
47 48 2.485795 GCAGGGGTGTGCGTCAAAA 61.486 57.895 0.00 0.00 32.74 2.44
48 49 2.904866 GCAGGGGTGTGCGTCAAA 60.905 61.111 0.00 0.00 32.74 2.69
49 50 4.947147 GGCAGGGGTGTGCGTCAA 62.947 66.667 0.00 0.00 45.00 3.18
66 67 3.976490 TACAGAGGTGGAGGCCCGG 62.976 68.421 0.00 0.00 34.29 5.73
67 68 1.550130 TTTACAGAGGTGGAGGCCCG 61.550 60.000 0.00 0.00 34.29 6.13
68 69 0.035343 GTTTACAGAGGTGGAGGCCC 60.035 60.000 0.00 0.00 0.00 5.80
69 70 0.391263 CGTTTACAGAGGTGGAGGCC 60.391 60.000 0.00 0.00 0.00 5.19
70 71 0.320697 ACGTTTACAGAGGTGGAGGC 59.679 55.000 0.00 0.00 0.00 4.70
71 72 4.202090 GGTATACGTTTACAGAGGTGGAGG 60.202 50.000 16.40 0.00 0.00 4.30
72 73 4.202090 GGGTATACGTTTACAGAGGTGGAG 60.202 50.000 16.40 0.00 0.00 3.86
73 74 3.701040 GGGTATACGTTTACAGAGGTGGA 59.299 47.826 16.40 0.00 0.00 4.02
74 75 3.181472 GGGGTATACGTTTACAGAGGTGG 60.181 52.174 16.40 0.00 0.00 4.61
75 76 3.181472 GGGGGTATACGTTTACAGAGGTG 60.181 52.174 16.40 0.00 0.00 4.00
115 116 6.128117 ACGCATTTTTCATCCTGTATACGTTT 60.128 34.615 0.00 0.00 0.00 3.60
127 128 5.627172 TGCTACAACTACGCATTTTTCATC 58.373 37.500 0.00 0.00 0.00 2.92
129 130 5.621197 ATGCTACAACTACGCATTTTTCA 57.379 34.783 0.00 0.00 41.22 2.69
143 144 5.142061 TCGGTCAGAGTAAAATGCTACAA 57.858 39.130 0.00 0.00 0.00 2.41
287 294 0.248949 GTCGGATGAACTAGACGGCC 60.249 60.000 0.00 0.00 0.00 6.13
292 299 2.025226 AGTCTGGGTCGGATGAACTAGA 60.025 50.000 0.00 0.00 45.99 2.43
299 306 2.060050 AGACTAGTCTGGGTCGGATG 57.940 55.000 24.62 0.00 38.75 3.51
303 310 1.477295 GGGAAAGACTAGTCTGGGTCG 59.523 57.143 25.83 0.00 40.36 4.79
305 312 2.638363 GTTGGGAAAGACTAGTCTGGGT 59.362 50.000 25.83 14.15 40.36 4.51
318 325 2.436173 GGTGATTTGGTTGGTTGGGAAA 59.564 45.455 0.00 0.00 0.00 3.13
362 384 1.393603 CCTCTCGTGCTCATGGTAGA 58.606 55.000 0.00 0.00 0.00 2.59
433 486 1.506493 GGAGCATGTCATCGTCATCC 58.494 55.000 0.00 0.00 0.00 3.51
436 489 1.141665 CCGGAGCATGTCATCGTCA 59.858 57.895 0.00 0.00 0.00 4.35
442 495 0.465705 GAATCTCCCGGAGCATGTCA 59.534 55.000 9.87 0.00 0.00 3.58
602 658 3.593794 GGAGCGACGCCTACCGAT 61.594 66.667 17.79 0.00 41.02 4.18
674 730 1.550976 GTCCTCGTGGAGAAGAATGGT 59.449 52.381 6.43 0.00 44.16 3.55
695 751 1.566018 CGGCAGTCGAGGGTTTTGTC 61.566 60.000 0.00 0.00 42.43 3.18
698 754 2.668550 GCGGCAGTCGAGGGTTTT 60.669 61.111 0.00 0.00 42.43 2.43
748 807 1.512156 CCCACAAAACTAAGCGGCGT 61.512 55.000 9.37 0.00 0.00 5.68
812 871 2.280524 CGTCTGGCCGTTGTCCAA 60.281 61.111 0.00 0.00 32.41 3.53
828 887 1.794222 GCCCCGTTGAAGATGAACG 59.206 57.895 0.00 0.00 44.59 3.95
867 926 1.660560 CCTGGAAATGGCAGCCTTCG 61.661 60.000 14.15 0.00 0.00 3.79
868 927 0.613012 ACCTGGAAATGGCAGCCTTC 60.613 55.000 14.15 8.99 0.00 3.46
888 969 2.364973 TCACGGGCTATCAGGGCA 60.365 61.111 0.00 0.00 0.00 5.36
913 997 4.730657 AGACATACGGAAACTCTTGTACG 58.269 43.478 0.00 0.00 0.00 3.67
945 1035 0.911769 TGCTCCATACCCCAGTCTTG 59.088 55.000 0.00 0.00 0.00 3.02
946 1036 1.668826 TTGCTCCATACCCCAGTCTT 58.331 50.000 0.00 0.00 0.00 3.01
995 1088 2.386661 ACTGGCTCGTTCCATAGTTG 57.613 50.000 0.00 0.00 35.22 3.16
1037 1130 2.012673 GATGCAGCTGAAGTAACCAGG 58.987 52.381 20.43 0.00 32.51 4.45
1051 1156 3.867493 ACTATGACATGTTGACGATGCAG 59.133 43.478 0.00 0.00 0.00 4.41
1092 1206 0.175302 CTGTCACAGCTAGGCTCTGG 59.825 60.000 7.96 0.00 36.40 3.86
1114 1228 3.006537 TCAGGTTCTACAGTTGCTGGTAC 59.993 47.826 1.08 0.00 35.51 3.34
1116 1230 2.047061 TCAGGTTCTACAGTTGCTGGT 58.953 47.619 1.08 0.00 35.51 4.00
1123 1237 2.860009 TCGACAGTCAGGTTCTACAGT 58.140 47.619 0.41 0.00 0.00 3.55
1139 2243 5.390613 CCGGCATAATCCATAAATTTCGAC 58.609 41.667 0.00 0.00 0.00 4.20
1142 2246 4.494484 GGCCGGCATAATCCATAAATTTC 58.506 43.478 30.85 0.00 0.00 2.17
1185 2297 4.277672 CCATGGAATTGTGAGATGTGGATC 59.722 45.833 5.56 0.00 0.00 3.36
1191 2303 1.335810 CGGCCATGGAATTGTGAGATG 59.664 52.381 18.40 0.00 0.00 2.90
1192 2304 1.683943 CGGCCATGGAATTGTGAGAT 58.316 50.000 18.40 0.00 0.00 2.75
1211 2326 4.222124 TCAGGCTTTCTCTTCCATAACC 57.778 45.455 0.00 0.00 0.00 2.85
1281 2396 2.224281 ACCGAAAGTTGATCTGAGCACA 60.224 45.455 0.00 0.00 0.00 4.57
1283 2398 2.416747 CACCGAAAGTTGATCTGAGCA 58.583 47.619 0.00 0.00 0.00 4.26
1327 2445 1.337823 TGCTTTACTCTCCTCGGCAAC 60.338 52.381 0.00 0.00 0.00 4.17
1344 2462 5.532406 ACAAGTTGTCACTACAATGATTGCT 59.468 36.000 4.84 0.00 46.84 3.91
1351 2469 4.523083 ACACCACAAGTTGTCACTACAAT 58.477 39.130 5.27 0.00 46.84 2.71
1357 2475 3.006940 TGAAGACACCACAAGTTGTCAC 58.993 45.455 5.27 0.00 32.30 3.67
1367 2485 4.442192 GGAGATAGACCATGAAGACACCAC 60.442 50.000 0.00 0.00 0.00 4.16
1420 2538 1.573108 TGGAGACAGGAGGACCATTC 58.427 55.000 0.00 0.00 38.94 2.67
1421 2539 3.815717 TGGAGACAGGAGGACCATT 57.184 52.632 0.00 0.00 38.94 3.16
1461 2579 1.312815 GCTTGCTATTACCTGCAGGG 58.687 55.000 35.42 18.83 40.46 4.45
1547 5370 5.614308 TCAGCATAACACTCAAGGATATGG 58.386 41.667 0.00 0.00 0.00 2.74
1586 5409 5.561339 GCAGCAAAAGGAAAAATTGATGTGG 60.561 40.000 5.11 0.00 41.24 4.17
1612 5441 7.596248 TGCTGTTTTCTTCTAAAGAATTCATGC 59.404 33.333 8.44 10.14 46.15 4.06
1613 5442 8.909671 GTGCTGTTTTCTTCTAAAGAATTCATG 58.090 33.333 8.44 0.00 46.15 3.07
1626 5455 4.822350 AGTCCCTTAAGTGCTGTTTTCTTC 59.178 41.667 0.97 0.00 0.00 2.87
1634 5488 3.409026 AGAACAGTCCCTTAAGTGCTG 57.591 47.619 13.29 13.29 0.00 4.41
1637 5517 5.823045 ACAGAAAAGAACAGTCCCTTAAGTG 59.177 40.000 0.97 0.00 0.00 3.16
1646 5526 3.621715 ACGACCAACAGAAAAGAACAGTC 59.378 43.478 0.00 0.00 0.00 3.51
1687 5584 9.573133 CCAAGTGGAACAAATAAGATTACATTC 57.427 33.333 0.00 0.00 44.16 2.67
1694 5591 6.431234 GTCAGACCAAGTGGAACAAATAAGAT 59.569 38.462 3.83 0.00 44.16 2.40
1708 5809 2.289694 CCGATTCCTTGTCAGACCAAGT 60.290 50.000 0.00 0.00 40.17 3.16
1751 5852 4.647291 ACGCGAGTGAAAAGATACTTTG 57.353 40.909 15.93 0.00 46.97 2.77
1778 5882 7.646922 GTCCAGTACTGAATATTACCGTAACAG 59.353 40.741 24.68 1.15 0.00 3.16
1784 5888 4.543692 CGGTCCAGTACTGAATATTACCG 58.456 47.826 24.68 23.39 41.01 4.02
1823 5927 9.912634 CTTCCATTTTTAACTGTTATGTGTCAT 57.087 29.630 0.37 0.00 0.00 3.06
1861 5970 1.141053 AGTTGGTTCGGTCTCAGCTTT 59.859 47.619 0.00 0.00 0.00 3.51
1899 6008 9.612620 GGTTCAAAAAGTGTGAATAGAGTTATG 57.387 33.333 0.00 0.00 37.34 1.90
1907 6016 7.947282 CCTTAAGGGTTCAAAAAGTGTGAATA 58.053 34.615 14.25 0.00 37.34 1.75
1924 6033 4.732672 AAGAGCGTAACTACCTTAAGGG 57.267 45.455 25.31 11.09 40.27 3.95
1926 6035 9.968743 CAAATAAAAGAGCGTAACTACCTTAAG 57.031 33.333 0.00 0.00 0.00 1.85
1928 6037 8.313292 TCCAAATAAAAGAGCGTAACTACCTTA 58.687 33.333 0.00 0.00 0.00 2.69
1932 6041 9.310716 AGTATCCAAATAAAAGAGCGTAACTAC 57.689 33.333 0.00 0.00 0.00 2.73
1940 6049 7.826690 TGGTTTCAGTATCCAAATAAAAGAGC 58.173 34.615 0.00 0.00 0.00 4.09
1947 6056 6.061022 TCAGCTGGTTTCAGTATCCAAATA 57.939 37.500 15.13 0.00 42.78 1.40
1956 6065 8.860088 ACTTTAATTTATTCAGCTGGTTTCAGT 58.140 29.630 15.13 0.89 42.78 3.41
2018 6128 5.964958 TTCTAAAGCAAAATGGACTCCTG 57.035 39.130 0.00 0.00 0.00 3.86
2098 6259 2.966516 GGGTTATCTAGGTCCACTGAGG 59.033 54.545 0.00 0.00 39.47 3.86
2141 6351 7.889873 ATTACAATTCCGATGGAAAACCATA 57.110 32.000 1.86 0.00 45.41 2.74
2163 6373 7.397192 ACAAGCATAATAAGTCAGGAACCAATT 59.603 33.333 0.00 0.00 0.00 2.32
2292 6506 6.759827 AGGCGATAATGTTACGTCACTTTATT 59.240 34.615 17.23 6.02 34.03 1.40
2319 6534 3.788142 AGTTATCTCCCCATGGACACATT 59.212 43.478 15.22 0.00 35.03 2.71
2320 6535 3.137176 CAGTTATCTCCCCATGGACACAT 59.863 47.826 15.22 2.32 35.03 3.21
2321 6536 2.505407 CAGTTATCTCCCCATGGACACA 59.495 50.000 15.22 0.00 35.03 3.72
2322 6537 2.771943 TCAGTTATCTCCCCATGGACAC 59.228 50.000 15.22 0.00 35.03 3.67
2323 6538 3.129262 TCAGTTATCTCCCCATGGACA 57.871 47.619 15.22 0.00 35.03 4.02
2324 6539 5.280215 CCTTATCAGTTATCTCCCCATGGAC 60.280 48.000 15.22 0.58 35.03 4.02
2325 6540 4.846367 CCTTATCAGTTATCTCCCCATGGA 59.154 45.833 15.22 0.00 38.75 3.41
2326 6541 4.599241 ACCTTATCAGTTATCTCCCCATGG 59.401 45.833 4.14 4.14 0.00 3.66
2327 6542 5.307976 TCACCTTATCAGTTATCTCCCCATG 59.692 44.000 0.00 0.00 0.00 3.66
2328 6543 5.308237 GTCACCTTATCAGTTATCTCCCCAT 59.692 44.000 0.00 0.00 0.00 4.00
2329 6544 4.654262 GTCACCTTATCAGTTATCTCCCCA 59.346 45.833 0.00 0.00 0.00 4.96
2330 6545 4.262079 CGTCACCTTATCAGTTATCTCCCC 60.262 50.000 0.00 0.00 0.00 4.81
2331 6546 4.341520 ACGTCACCTTATCAGTTATCTCCC 59.658 45.833 0.00 0.00 0.00 4.30
2332 6547 5.517322 ACGTCACCTTATCAGTTATCTCC 57.483 43.478 0.00 0.00 0.00 3.71
2333 6548 6.437094 GGTACGTCACCTTATCAGTTATCTC 58.563 44.000 0.00 0.00 44.79 2.75
2334 6549 6.388435 GGTACGTCACCTTATCAGTTATCT 57.612 41.667 0.00 0.00 44.79 1.98
2348 6563 2.124903 CTGGCGATAATGGTACGTCAC 58.875 52.381 0.00 0.00 36.75 3.67
2349 6564 1.067974 CCTGGCGATAATGGTACGTCA 59.932 52.381 0.00 0.00 39.23 4.35
2350 6565 1.338973 TCCTGGCGATAATGGTACGTC 59.661 52.381 0.00 0.00 0.00 4.34
2351 6566 1.405872 TCCTGGCGATAATGGTACGT 58.594 50.000 0.00 0.00 0.00 3.57
2352 6567 2.288825 ACATCCTGGCGATAATGGTACG 60.289 50.000 0.00 0.00 0.00 3.67
2353 6568 3.067106 CACATCCTGGCGATAATGGTAC 58.933 50.000 0.00 0.00 0.00 3.34
2354 6569 2.703536 ACACATCCTGGCGATAATGGTA 59.296 45.455 0.00 0.00 0.00 3.25
2355 6570 1.490490 ACACATCCTGGCGATAATGGT 59.510 47.619 0.00 0.00 0.00 3.55
2356 6571 2.146342 GACACATCCTGGCGATAATGG 58.854 52.381 0.00 0.00 0.00 3.16
2357 6572 2.146342 GGACACATCCTGGCGATAATG 58.854 52.381 0.00 0.00 42.45 1.90
2358 6573 1.768275 TGGACACATCCTGGCGATAAT 59.232 47.619 0.00 0.00 46.43 1.28
2359 6574 1.199615 TGGACACATCCTGGCGATAA 58.800 50.000 0.00 0.00 46.43 1.75
2360 6575 1.070601 CATGGACACATCCTGGCGATA 59.929 52.381 0.00 0.00 46.43 2.92
2361 6576 0.179037 CATGGACACATCCTGGCGAT 60.179 55.000 0.00 0.00 46.43 4.58
2362 6577 1.221566 CATGGACACATCCTGGCGA 59.778 57.895 0.00 0.00 46.43 5.54
2363 6578 1.820906 CCATGGACACATCCTGGCG 60.821 63.158 5.56 0.00 46.43 5.69
2364 6579 1.454479 CCCATGGACACATCCTGGC 60.454 63.158 15.22 0.00 46.43 4.85
2365 6580 1.228228 CCCCATGGACACATCCTGG 59.772 63.158 15.22 0.00 46.43 4.45
2366 6581 0.848735 ATCCCCATGGACACATCCTG 59.151 55.000 15.22 0.00 45.58 3.86
2367 6582 2.057922 GTATCCCCATGGACACATCCT 58.942 52.381 15.22 0.00 45.58 3.24
2368 6583 1.073923 GGTATCCCCATGGACACATCC 59.926 57.143 15.22 4.73 45.58 3.51
2387 6602 7.326789 CAGCAACAAATTGTAGAACAACATAGG 59.673 37.037 0.00 0.00 41.40 2.57
2393 6608 5.003692 TGCAGCAACAAATTGTAGAACAA 57.996 34.783 0.00 0.00 42.95 2.83
2395 6610 5.221880 TCATGCAGCAACAAATTGTAGAAC 58.778 37.500 0.00 0.00 38.17 3.01
2423 6659 4.593634 AGGGGCTTACTACATCCATAAGAC 59.406 45.833 0.00 0.00 33.81 3.01
2433 6669 6.308566 ACAAATTACAAAGGGGCTTACTACA 58.691 36.000 0.00 0.00 0.00 2.74
2475 6711 7.504926 ACATATTGTTCCCAGTTACTTAGGA 57.495 36.000 0.00 0.00 0.00 2.94
2485 6721 3.830744 TCCGGTACATATTGTTCCCAG 57.169 47.619 0.00 0.00 34.75 4.45
2522 6764 8.694581 ACTGATGGAACTATACTAACTAGGAC 57.305 38.462 0.00 0.00 0.00 3.85
2673 8022 5.128171 TGGAGTACATACCAGATACCACAAC 59.872 44.000 0.00 0.00 0.00 3.32
2676 8025 5.363005 ACTTGGAGTACATACCAGATACCAC 59.637 44.000 0.00 0.00 37.48 4.16
2677 8026 5.362717 CACTTGGAGTACATACCAGATACCA 59.637 44.000 0.00 0.00 37.48 3.25
2678 8027 5.363005 ACACTTGGAGTACATACCAGATACC 59.637 44.000 0.00 0.00 37.48 2.73
2679 8028 6.096423 TCACACTTGGAGTACATACCAGATAC 59.904 42.308 0.00 0.00 37.48 2.24
2681 8030 5.023452 TCACACTTGGAGTACATACCAGAT 58.977 41.667 0.00 0.00 37.48 2.90
2683 8032 4.801330 TCACACTTGGAGTACATACCAG 57.199 45.455 0.00 0.00 37.48 4.00
2739 8105 1.407979 ACCGAAGTAATAGTGGGAGCG 59.592 52.381 0.00 0.00 0.00 5.03
2780 8146 5.183140 GCAGTACTGAAGCCCATTTTCTTAA 59.817 40.000 27.08 0.00 0.00 1.85
2781 8147 4.700213 GCAGTACTGAAGCCCATTTTCTTA 59.300 41.667 27.08 0.00 0.00 2.10
2782 8148 3.507622 GCAGTACTGAAGCCCATTTTCTT 59.492 43.478 27.08 0.00 0.00 2.52
2783 8149 3.084786 GCAGTACTGAAGCCCATTTTCT 58.915 45.455 27.08 0.00 0.00 2.52
2839 8240 0.877071 AGCATGAGCAAACGAACCAG 59.123 50.000 0.00 0.00 45.49 4.00
2844 8245 1.266718 GTTTCCAGCATGAGCAAACGA 59.733 47.619 0.00 0.00 45.49 3.85
2845 8246 1.001487 TGTTTCCAGCATGAGCAAACG 60.001 47.619 0.00 0.00 45.49 3.60
2860 8261 8.195617 TGAAAATGTTTGGATTCTGTTGTTTC 57.804 30.769 0.00 0.00 0.00 2.78
2876 8277 4.218312 AGAAACCAGCCTCTGAAAATGTT 58.782 39.130 0.00 0.00 32.44 2.71
2879 8280 4.042684 AGAGAGAAACCAGCCTCTGAAAAT 59.957 41.667 0.00 0.00 39.64 1.82
2892 8293 4.707934 AGTAAGTAGGCAGAGAGAGAAACC 59.292 45.833 0.00 0.00 0.00 3.27
2898 8299 3.468770 CGCTAGTAAGTAGGCAGAGAGA 58.531 50.000 0.00 0.00 0.00 3.10
2912 8313 1.343465 GGAGCTATTTGCCCGCTAGTA 59.657 52.381 0.00 0.00 44.23 1.82
2913 8314 0.106894 GGAGCTATTTGCCCGCTAGT 59.893 55.000 0.00 0.00 44.23 2.57
2914 8315 0.603975 GGGAGCTATTTGCCCGCTAG 60.604 60.000 0.00 0.00 44.23 3.42
2915 8316 1.341913 TGGGAGCTATTTGCCCGCTA 61.342 55.000 3.15 0.00 45.08 4.26
2916 8317 1.999634 ATGGGAGCTATTTGCCCGCT 62.000 55.000 3.15 0.00 45.08 5.52
2917 8318 1.529244 ATGGGAGCTATTTGCCCGC 60.529 57.895 3.15 0.00 45.08 6.13
2918 8319 0.466189 ACATGGGAGCTATTTGCCCG 60.466 55.000 0.00 0.00 45.08 6.13
2919 8320 1.035139 CACATGGGAGCTATTTGCCC 58.965 55.000 0.29 0.29 44.23 5.36
2920 8321 1.678101 GTCACATGGGAGCTATTTGCC 59.322 52.381 0.00 0.00 44.23 4.52
2921 8322 2.368439 TGTCACATGGGAGCTATTTGC 58.632 47.619 0.00 0.00 43.29 3.68
2922 8323 3.249320 CGATGTCACATGGGAGCTATTTG 59.751 47.826 0.00 0.00 0.00 2.32
2923 8324 3.118261 ACGATGTCACATGGGAGCTATTT 60.118 43.478 0.00 0.00 0.00 1.40
2924 8325 2.435805 ACGATGTCACATGGGAGCTATT 59.564 45.455 0.00 0.00 0.00 1.73
2925 8326 2.042464 ACGATGTCACATGGGAGCTAT 58.958 47.619 0.00 0.00 0.00 2.97
2926 8327 1.485124 ACGATGTCACATGGGAGCTA 58.515 50.000 0.00 0.00 0.00 3.32
2927 8328 0.615331 AACGATGTCACATGGGAGCT 59.385 50.000 0.00 0.00 0.00 4.09
2928 8329 0.729116 CAACGATGTCACATGGGAGC 59.271 55.000 0.00 0.00 0.00 4.70
2929 8330 2.274437 CTCAACGATGTCACATGGGAG 58.726 52.381 0.00 0.00 0.00 4.30
2930 8331 1.623311 ACTCAACGATGTCACATGGGA 59.377 47.619 4.66 0.00 0.00 4.37
2931 8332 2.099141 ACTCAACGATGTCACATGGG 57.901 50.000 4.66 0.00 0.00 4.00
2932 8333 3.066380 TCAACTCAACGATGTCACATGG 58.934 45.455 0.00 0.00 0.00 3.66
2933 8334 4.730600 TTCAACTCAACGATGTCACATG 57.269 40.909 0.00 0.00 0.00 3.21
2934 8335 5.239306 ACAATTCAACTCAACGATGTCACAT 59.761 36.000 0.00 0.00 0.00 3.21
2935 8336 4.574421 ACAATTCAACTCAACGATGTCACA 59.426 37.500 0.00 0.00 0.00 3.58
2936 8337 5.095691 ACAATTCAACTCAACGATGTCAC 57.904 39.130 0.00 0.00 0.00 3.67
2937 8338 4.213270 GGACAATTCAACTCAACGATGTCA 59.787 41.667 0.00 0.00 38.09 3.58
2938 8339 4.213270 TGGACAATTCAACTCAACGATGTC 59.787 41.667 0.00 0.00 36.18 3.06
2939 8340 4.133820 TGGACAATTCAACTCAACGATGT 58.866 39.130 0.00 0.00 0.00 3.06
2940 8341 4.747540 TGGACAATTCAACTCAACGATG 57.252 40.909 0.00 0.00 0.00 3.84
2941 8342 5.530915 TCTTTGGACAATTCAACTCAACGAT 59.469 36.000 0.00 0.00 0.00 3.73
2942 8343 4.878971 TCTTTGGACAATTCAACTCAACGA 59.121 37.500 0.00 0.00 0.00 3.85
2943 8344 5.168526 TCTTTGGACAATTCAACTCAACG 57.831 39.130 0.00 0.00 0.00 4.10
2944 8345 5.455525 CGTTCTTTGGACAATTCAACTCAAC 59.544 40.000 0.00 0.00 0.00 3.18
2945 8346 5.355630 TCGTTCTTTGGACAATTCAACTCAA 59.644 36.000 0.00 0.00 0.00 3.02
2946 8347 4.878971 TCGTTCTTTGGACAATTCAACTCA 59.121 37.500 0.00 0.00 0.00 3.41
2947 8348 5.205565 GTCGTTCTTTGGACAATTCAACTC 58.794 41.667 0.00 0.00 33.41 3.01
2948 8349 4.260620 CGTCGTTCTTTGGACAATTCAACT 60.261 41.667 0.00 0.00 32.74 3.16
2949 8350 3.966218 CGTCGTTCTTTGGACAATTCAAC 59.034 43.478 0.00 0.00 32.74 3.18
2950 8351 3.623960 ACGTCGTTCTTTGGACAATTCAA 59.376 39.130 0.00 0.00 32.74 2.69
2951 8352 3.199677 ACGTCGTTCTTTGGACAATTCA 58.800 40.909 0.00 0.00 32.74 2.57
2952 8353 3.660904 CGACGTCGTTCTTTGGACAATTC 60.661 47.826 29.08 0.00 32.74 2.17
2953 8354 2.220133 CGACGTCGTTCTTTGGACAATT 59.780 45.455 29.08 0.00 32.74 2.32
2954 8355 1.790623 CGACGTCGTTCTTTGGACAAT 59.209 47.619 29.08 0.00 32.74 2.71
2955 8356 1.202203 CGACGTCGTTCTTTGGACAA 58.798 50.000 29.08 0.00 32.74 3.18
2956 8357 2.876052 CGACGTCGTTCTTTGGACA 58.124 52.632 29.08 0.00 32.74 4.02
2967 8368 1.397945 CCATTTGAACCAACGACGTCG 60.398 52.381 34.58 34.58 46.33 5.12
2968 8369 1.662026 GCCATTTGAACCAACGACGTC 60.662 52.381 5.18 5.18 0.00 4.34
2969 8370 0.309612 GCCATTTGAACCAACGACGT 59.690 50.000 0.00 0.00 0.00 4.34
2970 8371 0.591170 AGCCATTTGAACCAACGACG 59.409 50.000 0.00 0.00 0.00 5.12
2971 8372 1.880027 AGAGCCATTTGAACCAACGAC 59.120 47.619 0.00 0.00 0.00 4.34
2972 8373 2.151202 GAGAGCCATTTGAACCAACGA 58.849 47.619 0.00 0.00 0.00 3.85
2973 8374 1.879380 TGAGAGCCATTTGAACCAACG 59.121 47.619 0.00 0.00 0.00 4.10
2974 8375 3.841643 CATGAGAGCCATTTGAACCAAC 58.158 45.455 0.00 0.00 31.94 3.77
2975 8376 2.231964 GCATGAGAGCCATTTGAACCAA 59.768 45.455 0.00 0.00 31.94 3.67
2976 8377 1.820519 GCATGAGAGCCATTTGAACCA 59.179 47.619 0.00 0.00 31.94 3.67
2977 8378 1.202222 CGCATGAGAGCCATTTGAACC 60.202 52.381 0.00 0.00 31.94 3.62
2978 8379 1.739466 TCGCATGAGAGCCATTTGAAC 59.261 47.619 0.00 0.00 31.94 3.18
2979 8380 1.739466 GTCGCATGAGAGCCATTTGAA 59.261 47.619 0.00 0.00 31.94 2.69
2980 8381 1.338960 TGTCGCATGAGAGCCATTTGA 60.339 47.619 0.00 0.00 31.94 2.69
2981 8382 1.089112 TGTCGCATGAGAGCCATTTG 58.911 50.000 0.00 0.00 31.94 2.32
2982 8383 1.945394 GATGTCGCATGAGAGCCATTT 59.055 47.619 0.00 0.00 31.94 2.32
2983 8384 1.140452 AGATGTCGCATGAGAGCCATT 59.860 47.619 0.00 0.00 31.94 3.16
2984 8385 0.757512 AGATGTCGCATGAGAGCCAT 59.242 50.000 0.00 0.47 35.44 4.40
2985 8386 0.179092 CAGATGTCGCATGAGAGCCA 60.179 55.000 0.00 0.00 0.00 4.75
2986 8387 1.497223 GCAGATGTCGCATGAGAGCC 61.497 60.000 0.00 0.00 0.00 4.70
2987 8388 1.819226 CGCAGATGTCGCATGAGAGC 61.819 60.000 0.00 0.00 0.00 4.09
2988 8389 0.527169 ACGCAGATGTCGCATGAGAG 60.527 55.000 0.00 0.00 0.00 3.20
2989 8390 0.108662 AACGCAGATGTCGCATGAGA 60.109 50.000 0.00 0.00 0.00 3.27
2990 8391 0.025898 CAACGCAGATGTCGCATGAG 59.974 55.000 0.00 0.00 0.00 2.90
2991 8392 1.360931 CCAACGCAGATGTCGCATGA 61.361 55.000 0.00 0.00 0.00 3.07
2992 8393 1.061411 CCAACGCAGATGTCGCATG 59.939 57.895 0.00 0.00 0.00 4.06
2993 8394 0.673333 TTCCAACGCAGATGTCGCAT 60.673 50.000 0.00 0.00 0.00 4.73
2994 8395 0.882484 TTTCCAACGCAGATGTCGCA 60.882 50.000 0.00 0.00 0.00 5.10
2995 8396 0.237235 TTTTCCAACGCAGATGTCGC 59.763 50.000 0.00 0.00 0.00 5.19
2996 8397 2.679355 TTTTTCCAACGCAGATGTCG 57.321 45.000 0.00 0.00 0.00 4.35
3012 8413 0.168128 GTCGCACGGCAGCTATTTTT 59.832 50.000 0.00 0.00 0.00 1.94
3013 8414 0.953471 TGTCGCACGGCAGCTATTTT 60.953 50.000 0.00 0.00 0.00 1.82
3014 8415 1.375396 TGTCGCACGGCAGCTATTT 60.375 52.632 0.00 0.00 0.00 1.40
3015 8416 2.100631 GTGTCGCACGGCAGCTATT 61.101 57.895 0.00 0.00 0.00 1.73
3016 8417 2.509336 GTGTCGCACGGCAGCTAT 60.509 61.111 0.00 0.00 0.00 2.97
3017 8418 3.680786 AGTGTCGCACGGCAGCTA 61.681 61.111 0.00 0.00 39.64 3.32
3024 8425 3.914605 TAGGCAGCAGTGTCGCACG 62.915 63.158 7.98 0.00 39.64 5.34
3025 8426 1.021390 ATTAGGCAGCAGTGTCGCAC 61.021 55.000 7.98 2.28 31.53 5.34
3026 8427 0.740868 GATTAGGCAGCAGTGTCGCA 60.741 55.000 7.98 0.00 31.53 5.10
3027 8428 1.432270 GGATTAGGCAGCAGTGTCGC 61.432 60.000 0.00 0.00 31.53 5.19
3028 8429 0.108186 TGGATTAGGCAGCAGTGTCG 60.108 55.000 0.00 0.00 31.53 4.35
3029 8430 2.113860 TTGGATTAGGCAGCAGTGTC 57.886 50.000 0.00 0.00 0.00 3.67
3030 8431 2.040278 TCTTTGGATTAGGCAGCAGTGT 59.960 45.455 0.00 0.00 0.00 3.55
3031 8432 2.421424 GTCTTTGGATTAGGCAGCAGTG 59.579 50.000 0.00 0.00 0.00 3.66
3032 8433 2.040278 TGTCTTTGGATTAGGCAGCAGT 59.960 45.455 0.00 0.00 0.00 4.40
3033 8434 2.421424 GTGTCTTTGGATTAGGCAGCAG 59.579 50.000 0.00 0.00 0.00 4.24
3034 8435 2.224744 TGTGTCTTTGGATTAGGCAGCA 60.225 45.455 0.00 0.00 0.00 4.41
3035 8436 2.436417 TGTGTCTTTGGATTAGGCAGC 58.564 47.619 0.00 0.00 0.00 5.25
3036 8437 4.012374 ACATGTGTCTTTGGATTAGGCAG 58.988 43.478 0.00 0.00 0.00 4.85
3037 8438 4.032960 ACATGTGTCTTTGGATTAGGCA 57.967 40.909 0.00 0.00 0.00 4.75
3038 8439 5.391312 AAACATGTGTCTTTGGATTAGGC 57.609 39.130 0.00 0.00 0.00 3.93
3039 8440 9.191995 GTTTTAAACATGTGTCTTTGGATTAGG 57.808 33.333 0.00 0.00 0.00 2.69
3040 8441 9.965824 AGTTTTAAACATGTGTCTTTGGATTAG 57.034 29.630 10.60 0.00 0.00 1.73
3041 8442 9.959749 GAGTTTTAAACATGTGTCTTTGGATTA 57.040 29.630 10.60 0.00 0.00 1.75
3042 8443 7.647715 CGAGTTTTAAACATGTGTCTTTGGATT 59.352 33.333 10.60 0.00 0.00 3.01
3043 8444 7.012894 TCGAGTTTTAAACATGTGTCTTTGGAT 59.987 33.333 10.60 0.00 0.00 3.41
3044 8445 6.316640 TCGAGTTTTAAACATGTGTCTTTGGA 59.683 34.615 10.60 0.00 0.00 3.53
3045 8446 6.491394 TCGAGTTTTAAACATGTGTCTTTGG 58.509 36.000 10.60 0.00 0.00 3.28
3046 8447 7.962934 TTCGAGTTTTAAACATGTGTCTTTG 57.037 32.000 10.60 0.00 0.00 2.77
3047 8448 8.402472 TGATTCGAGTTTTAAACATGTGTCTTT 58.598 29.630 10.60 0.00 0.00 2.52
3048 8449 7.925993 TGATTCGAGTTTTAAACATGTGTCTT 58.074 30.769 10.60 0.00 0.00 3.01
3049 8450 7.307989 CCTGATTCGAGTTTTAAACATGTGTCT 60.308 37.037 10.60 0.00 0.00 3.41
3050 8451 6.797033 CCTGATTCGAGTTTTAAACATGTGTC 59.203 38.462 10.60 3.68 0.00 3.67
3051 8452 6.262273 ACCTGATTCGAGTTTTAAACATGTGT 59.738 34.615 10.60 0.00 0.00 3.72
3052 8453 6.578545 CACCTGATTCGAGTTTTAAACATGTG 59.421 38.462 10.60 0.00 0.00 3.21
3053 8454 6.485313 TCACCTGATTCGAGTTTTAAACATGT 59.515 34.615 10.60 0.00 0.00 3.21
3054 8455 6.898041 TCACCTGATTCGAGTTTTAAACATG 58.102 36.000 10.60 2.11 0.00 3.21
3055 8456 6.348540 GCTCACCTGATTCGAGTTTTAAACAT 60.349 38.462 10.60 0.00 0.00 2.71
3056 8457 5.049680 GCTCACCTGATTCGAGTTTTAAACA 60.050 40.000 10.60 0.00 0.00 2.83
3057 8458 5.383130 GCTCACCTGATTCGAGTTTTAAAC 58.617 41.667 0.00 0.00 0.00 2.01
3058 8459 4.151689 CGCTCACCTGATTCGAGTTTTAAA 59.848 41.667 0.00 0.00 0.00 1.52
3059 8460 3.678072 CGCTCACCTGATTCGAGTTTTAA 59.322 43.478 0.00 0.00 0.00 1.52
3060 8461 3.250744 CGCTCACCTGATTCGAGTTTTA 58.749 45.455 0.00 0.00 0.00 1.52
3061 8462 2.069273 CGCTCACCTGATTCGAGTTTT 58.931 47.619 0.00 0.00 0.00 2.43
3062 8463 1.673033 CCGCTCACCTGATTCGAGTTT 60.673 52.381 0.00 0.00 0.00 2.66
3063 8464 0.108615 CCGCTCACCTGATTCGAGTT 60.109 55.000 0.00 0.00 0.00 3.01
3064 8465 1.513158 CCGCTCACCTGATTCGAGT 59.487 57.895 0.00 0.00 0.00 4.18
3065 8466 1.227089 CCCGCTCACCTGATTCGAG 60.227 63.158 0.00 0.00 0.00 4.04
3066 8467 1.680989 TCCCGCTCACCTGATTCGA 60.681 57.895 0.00 0.00 0.00 3.71
3067 8468 1.519455 GTCCCGCTCACCTGATTCG 60.519 63.158 0.00 0.00 0.00 3.34
3068 8469 1.153349 GGTCCCGCTCACCTGATTC 60.153 63.158 0.00 0.00 0.00 2.52
3069 8470 2.670148 GGGTCCCGCTCACCTGATT 61.670 63.158 0.00 0.00 33.96 2.57
3070 8471 3.083997 GGGTCCCGCTCACCTGAT 61.084 66.667 0.00 0.00 33.96 2.90
3071 8472 4.631740 TGGGTCCCGCTCACCTGA 62.632 66.667 2.65 0.00 33.96 3.86
3072 8473 4.394712 GTGGGTCCCGCTCACCTG 62.395 72.222 14.73 0.00 42.69 4.00
3094 8495 3.112263 CTGGATAAGTTAGTGGGTCCCA 58.888 50.000 6.47 6.47 0.00 4.37
3095 8496 2.158798 GCTGGATAAGTTAGTGGGTCCC 60.159 54.545 0.00 0.00 0.00 4.46
3096 8497 2.772515 AGCTGGATAAGTTAGTGGGTCC 59.227 50.000 0.00 0.00 0.00 4.46
3097 8498 3.451178 TGAGCTGGATAAGTTAGTGGGTC 59.549 47.826 0.00 0.00 0.00 4.46
3098 8499 3.450904 TGAGCTGGATAAGTTAGTGGGT 58.549 45.455 0.00 0.00 0.00 4.51
3099 8500 3.452627 ACTGAGCTGGATAAGTTAGTGGG 59.547 47.826 0.00 0.00 0.00 4.61
3100 8501 4.744795 ACTGAGCTGGATAAGTTAGTGG 57.255 45.455 0.00 0.00 0.00 4.00
3101 8502 6.703607 CCAATACTGAGCTGGATAAGTTAGTG 59.296 42.308 0.00 0.00 31.38 2.74
3102 8503 6.384305 ACCAATACTGAGCTGGATAAGTTAGT 59.616 38.462 0.00 0.00 34.16 2.24
3103 8504 6.821388 ACCAATACTGAGCTGGATAAGTTAG 58.179 40.000 0.00 0.00 34.16 2.34
3104 8505 6.382859 TGACCAATACTGAGCTGGATAAGTTA 59.617 38.462 0.00 0.00 34.16 2.24
3105 8506 5.189736 TGACCAATACTGAGCTGGATAAGTT 59.810 40.000 0.00 0.00 34.16 2.66
3106 8507 4.716784 TGACCAATACTGAGCTGGATAAGT 59.283 41.667 0.00 0.00 34.16 2.24
3107 8508 5.282055 TGACCAATACTGAGCTGGATAAG 57.718 43.478 0.00 0.00 34.16 1.73
3108 8509 4.101585 CCTGACCAATACTGAGCTGGATAA 59.898 45.833 0.00 0.00 34.16 1.75
3109 8510 3.643320 CCTGACCAATACTGAGCTGGATA 59.357 47.826 0.00 0.00 34.16 2.59
3110 8511 2.437281 CCTGACCAATACTGAGCTGGAT 59.563 50.000 0.00 0.00 34.16 3.41
3111 8512 1.833630 CCTGACCAATACTGAGCTGGA 59.166 52.381 0.00 0.00 34.16 3.86
3112 8513 1.556911 ACCTGACCAATACTGAGCTGG 59.443 52.381 0.00 0.00 36.24 4.85
3113 8514 2.234661 TCACCTGACCAATACTGAGCTG 59.765 50.000 0.00 0.00 0.00 4.24
3114 8515 2.499289 CTCACCTGACCAATACTGAGCT 59.501 50.000 0.00 0.00 0.00 4.09
3115 8516 2.898705 CTCACCTGACCAATACTGAGC 58.101 52.381 0.00 0.00 0.00 4.26
3116 8517 2.736719 CGCTCACCTGACCAATACTGAG 60.737 54.545 0.00 0.00 0.00 3.35
3117 8518 1.204704 CGCTCACCTGACCAATACTGA 59.795 52.381 0.00 0.00 0.00 3.41
3118 8519 1.645034 CGCTCACCTGACCAATACTG 58.355 55.000 0.00 0.00 0.00 2.74
3119 8520 0.537188 CCGCTCACCTGACCAATACT 59.463 55.000 0.00 0.00 0.00 2.12
3120 8521 0.462047 CCCGCTCACCTGACCAATAC 60.462 60.000 0.00 0.00 0.00 1.89
3121 8522 0.616395 TCCCGCTCACCTGACCAATA 60.616 55.000 0.00 0.00 0.00 1.90
3122 8523 1.918293 TCCCGCTCACCTGACCAAT 60.918 57.895 0.00 0.00 0.00 3.16
3123 8524 2.525629 TCCCGCTCACCTGACCAA 60.526 61.111 0.00 0.00 0.00 3.67
3124 8525 3.311110 GTCCCGCTCACCTGACCA 61.311 66.667 0.00 0.00 0.00 4.02
3125 8526 4.083862 GGTCCCGCTCACCTGACC 62.084 72.222 0.00 0.00 40.40 4.02
3126 8527 4.083862 GGGTCCCGCTCACCTGAC 62.084 72.222 0.00 0.00 33.96 3.51
3127 8528 4.631740 TGGGTCCCGCTCACCTGA 62.632 66.667 2.65 0.00 33.96 3.86
3128 8529 4.394712 GTGGGTCCCGCTCACCTG 62.395 72.222 14.73 0.00 42.69 4.00
3132 8533 3.625897 CACTGTGGGTCCCGCTCA 61.626 66.667 22.20 10.95 34.70 4.26
3133 8534 3.626924 ACACTGTGGGTCCCGCTC 61.627 66.667 22.20 6.80 34.70 5.03
3134 8535 3.941188 CACACTGTGGGTCCCGCT 61.941 66.667 22.20 0.00 34.70 5.52
3150 8551 3.112263 CTGGATAAGTTAGTGGGTCCCA 58.888 50.000 6.47 6.47 0.00 4.37
3151 8552 2.158798 GCTGGATAAGTTAGTGGGTCCC 60.159 54.545 0.00 0.00 0.00 4.46
3152 8553 2.772515 AGCTGGATAAGTTAGTGGGTCC 59.227 50.000 0.00 0.00 0.00 4.46
3153 8554 3.451178 TGAGCTGGATAAGTTAGTGGGTC 59.549 47.826 0.00 0.00 0.00 4.46
3154 8555 3.450904 TGAGCTGGATAAGTTAGTGGGT 58.549 45.455 0.00 0.00 0.00 4.51
3155 8556 3.742640 GCTGAGCTGGATAAGTTAGTGGG 60.743 52.174 0.00 0.00 0.00 4.61
3156 8557 3.118629 TGCTGAGCTGGATAAGTTAGTGG 60.119 47.826 5.83 0.00 0.00 4.00
3157 8558 4.128925 TGCTGAGCTGGATAAGTTAGTG 57.871 45.455 5.83 0.00 0.00 2.74
3158 8559 5.121811 CAATGCTGAGCTGGATAAGTTAGT 58.878 41.667 5.83 0.00 0.00 2.24
3159 8560 4.514441 CCAATGCTGAGCTGGATAAGTTAG 59.486 45.833 6.89 0.00 31.38 2.34
3160 8561 4.080356 ACCAATGCTGAGCTGGATAAGTTA 60.080 41.667 18.30 0.00 34.16 2.24
3161 8562 3.285484 CCAATGCTGAGCTGGATAAGTT 58.715 45.455 6.89 0.00 31.38 2.66
3162 8563 2.240667 ACCAATGCTGAGCTGGATAAGT 59.759 45.455 18.30 0.00 34.16 2.24
3163 8564 2.928334 ACCAATGCTGAGCTGGATAAG 58.072 47.619 18.30 0.00 34.16 1.73
3164 8565 3.199727 TGTACCAATGCTGAGCTGGATAA 59.800 43.478 18.30 2.22 34.16 1.75
3165 8566 2.771372 TGTACCAATGCTGAGCTGGATA 59.229 45.455 18.30 5.58 34.16 2.59
3166 8567 1.561076 TGTACCAATGCTGAGCTGGAT 59.439 47.619 18.30 6.43 34.16 3.41
3167 8568 0.983467 TGTACCAATGCTGAGCTGGA 59.017 50.000 18.30 1.10 34.16 3.86
3168 8569 1.741706 CTTGTACCAATGCTGAGCTGG 59.258 52.381 10.80 10.80 36.24 4.85
3169 8570 2.676839 CTCTTGTACCAATGCTGAGCTG 59.323 50.000 5.83 0.00 0.00 4.24
3170 8571 2.568956 TCTCTTGTACCAATGCTGAGCT 59.431 45.455 5.83 0.00 0.00 4.09
3171 8572 2.935201 CTCTCTTGTACCAATGCTGAGC 59.065 50.000 0.00 0.00 0.00 4.26
3172 8573 3.196469 TCCTCTCTTGTACCAATGCTGAG 59.804 47.826 0.00 0.00 0.00 3.35
3173 8574 3.055819 GTCCTCTCTTGTACCAATGCTGA 60.056 47.826 0.00 0.00 0.00 4.26
3174 8575 3.265791 GTCCTCTCTTGTACCAATGCTG 58.734 50.000 0.00 0.00 0.00 4.41
3175 8576 2.906389 TGTCCTCTCTTGTACCAATGCT 59.094 45.455 0.00 0.00 0.00 3.79
3176 8577 3.003480 GTGTCCTCTCTTGTACCAATGC 58.997 50.000 0.00 0.00 0.00 3.56
3177 8578 3.600388 GGTGTCCTCTCTTGTACCAATG 58.400 50.000 0.00 0.00 0.00 2.82
3178 8579 2.233922 CGGTGTCCTCTCTTGTACCAAT 59.766 50.000 0.00 0.00 0.00 3.16
3179 8580 1.616865 CGGTGTCCTCTCTTGTACCAA 59.383 52.381 0.00 0.00 0.00 3.67
3180 8581 1.202964 TCGGTGTCCTCTCTTGTACCA 60.203 52.381 0.00 0.00 0.00 3.25
3181 8582 1.473278 CTCGGTGTCCTCTCTTGTACC 59.527 57.143 0.00 0.00 0.00 3.34
3182 8583 1.135344 GCTCGGTGTCCTCTCTTGTAC 60.135 57.143 0.00 0.00 0.00 2.90
3183 8584 1.174783 GCTCGGTGTCCTCTCTTGTA 58.825 55.000 0.00 0.00 0.00 2.41
3184 8585 0.540830 AGCTCGGTGTCCTCTCTTGT 60.541 55.000 0.00 0.00 0.00 3.16
3185 8586 0.108898 CAGCTCGGTGTCCTCTCTTG 60.109 60.000 0.00 0.00 0.00 3.02
3186 8587 0.540830 ACAGCTCGGTGTCCTCTCTT 60.541 55.000 0.00 0.00 0.00 2.85
3187 8588 1.075836 ACAGCTCGGTGTCCTCTCT 59.924 57.895 0.00 0.00 0.00 3.10
3188 8589 1.214062 CACAGCTCGGTGTCCTCTC 59.786 63.158 0.00 0.00 34.09 3.20
3189 8590 2.936912 GCACAGCTCGGTGTCCTCT 61.937 63.158 6.11 0.00 40.89 3.69
3190 8591 2.433318 GCACAGCTCGGTGTCCTC 60.433 66.667 6.11 0.00 40.89 3.71
3191 8592 4.008933 GGCACAGCTCGGTGTCCT 62.009 66.667 6.11 0.00 40.89 3.85
3198 8599 4.803426 GACTCGGGGCACAGCTCG 62.803 72.222 0.00 0.00 0.00 5.03
3199 8600 4.803426 CGACTCGGGGCACAGCTC 62.803 72.222 0.00 0.00 0.00 4.09
3218 8619 4.840005 GTAGGGCTCGGGTGCTGC 62.840 72.222 0.00 0.00 0.00 5.25
3219 8620 4.162690 GGTAGGGCTCGGGTGCTG 62.163 72.222 0.00 0.00 0.00 4.41
3222 8623 4.143333 CACGGTAGGGCTCGGGTG 62.143 72.222 0.00 0.00 0.00 4.61
3223 8624 4.371417 TCACGGTAGGGCTCGGGT 62.371 66.667 0.00 0.00 0.00 5.28
3224 8625 3.834799 GTCACGGTAGGGCTCGGG 61.835 72.222 0.00 0.00 0.00 5.14
3225 8626 2.280823 GAAGTCACGGTAGGGCTCGG 62.281 65.000 0.00 0.00 0.00 4.63
3226 8627 1.139095 GAAGTCACGGTAGGGCTCG 59.861 63.158 0.00 0.00 0.00 5.03
3227 8628 1.516423 GGAAGTCACGGTAGGGCTC 59.484 63.158 0.00 0.00 0.00 4.70
3228 8629 1.988406 GGGAAGTCACGGTAGGGCT 60.988 63.158 0.00 0.00 0.00 5.19
3229 8630 1.623542 ATGGGAAGTCACGGTAGGGC 61.624 60.000 0.00 0.00 0.00 5.19
3230 8631 0.464452 GATGGGAAGTCACGGTAGGG 59.536 60.000 0.00 0.00 0.00 3.53
3231 8632 0.464452 GGATGGGAAGTCACGGTAGG 59.536 60.000 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.