Multiple sequence alignment - TraesCS3D01G438000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G438000 chr3D 100.000 2522 0 0 676 3197 548807688 548805167 0.000000e+00 4658
1 TraesCS3D01G438000 chr3D 100.000 400 0 0 1 400 548808363 548807964 0.000000e+00 739
2 TraesCS3D01G438000 chr3D 99.725 363 1 0 38 400 548807688 548807326 0.000000e+00 665
3 TraesCS3D01G438000 chr3D 99.725 363 1 0 676 1038 548808326 548807964 0.000000e+00 665
4 TraesCS3D01G438000 chr3B 95.933 1082 42 2 1579 2660 727983071 727981992 0.000000e+00 1753
5 TraesCS3D01G438000 chr3B 90.087 807 59 10 779 1579 728087634 728086843 0.000000e+00 1027
6 TraesCS3D01G438000 chr3B 90.805 261 13 5 141 400 728087634 728087384 3.950000e-89 339
7 TraesCS3D01G438000 chr3B 88.933 253 23 3 2756 3003 727981994 727981742 1.110000e-79 307
8 TraesCS3D01G438000 chr3B 87.562 201 13 6 2997 3197 727968038 727967850 4.150000e-54 222
9 TraesCS3D01G438000 chr3A 92.867 701 36 5 779 1478 686202105 686201418 0.000000e+00 1005
10 TraesCS3D01G438000 chr3A 91.571 261 11 4 141 400 686202105 686201855 1.820000e-92 350
11 TraesCS3D01G438000 chr3A 81.570 293 37 7 2638 2917 686200280 686199992 3.210000e-55 226


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G438000 chr3D 548805167 548808363 3196 True 1681.75 4658 99.862500 1 3197 4 chr3D.!!$R1 3196
1 TraesCS3D01G438000 chr3B 727981742 727983071 1329 True 1030.00 1753 92.433000 1579 3003 2 chr3B.!!$R2 1424
2 TraesCS3D01G438000 chr3B 728086843 728087634 791 True 683.00 1027 90.446000 141 1579 2 chr3B.!!$R3 1438
3 TraesCS3D01G438000 chr3A 686199992 686202105 2113 True 527.00 1005 88.669333 141 2917 3 chr3A.!!$R1 2776

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
296 297 0.037232 AGAACTCGAAAAGCCCTCCG 60.037 55.0 0.0 0.0 0.00 4.63 F
746 747 0.037605 AAAGACGTAGGCCCACTTCG 60.038 55.0 0.0 0.0 44.39 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1966 2015 0.540365 ACCAAATCACCAGGGCAGTG 60.540 55.0 0.00 0.00 36.54 3.66 R
2528 2577 0.101219 GCAAGGTGAATCGATTGGGC 59.899 55.0 16.96 1.51 0.00 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 4.185467 CTCAGAAGCATGTAGTGTGACT 57.815 45.455 0.00 0.00 0.00 3.41
53 54 4.564041 CTCAGAAGCATGTAGTGTGACTT 58.436 43.478 0.00 0.00 0.00 3.01
54 55 4.960938 TCAGAAGCATGTAGTGTGACTTT 58.039 39.130 0.00 0.00 0.00 2.66
55 56 5.368145 TCAGAAGCATGTAGTGTGACTTTT 58.632 37.500 0.00 0.00 0.00 2.27
56 57 5.822519 TCAGAAGCATGTAGTGTGACTTTTT 59.177 36.000 0.00 0.00 0.00 1.94
73 74 3.513462 TTTTTCATACAGCGACGTGTG 57.487 42.857 0.00 5.75 31.46 3.82
74 75 1.424403 TTTCATACAGCGACGTGTGG 58.576 50.000 0.00 5.86 31.46 4.17
75 76 1.011968 TTCATACAGCGACGTGTGGC 61.012 55.000 0.00 0.00 34.35 5.01
89 90 3.941081 TGGCGTGCCAAGGAAAAA 58.059 50.000 11.96 0.00 44.12 1.94
106 107 2.651382 AAAAAGACGTAGGCCCACTT 57.349 45.000 0.00 0.00 0.00 3.16
107 108 2.180432 AAAAGACGTAGGCCCACTTC 57.820 50.000 0.00 0.00 0.00 3.01
108 109 0.037605 AAAGACGTAGGCCCACTTCG 60.038 55.000 0.00 0.00 44.39 3.79
109 110 2.502692 AAGACGTAGGCCCACTTCGC 62.503 60.000 0.00 0.00 42.86 4.70
110 111 3.291101 GACGTAGGCCCACTTCGCA 62.291 63.158 0.00 0.00 42.86 5.10
111 112 2.813908 CGTAGGCCCACTTCGCAC 60.814 66.667 0.00 0.00 33.28 5.34
112 113 2.813908 GTAGGCCCACTTCGCACG 60.814 66.667 0.00 0.00 0.00 5.34
113 114 2.992689 TAGGCCCACTTCGCACGA 60.993 61.111 0.00 0.00 0.00 4.35
114 115 3.001902 TAGGCCCACTTCGCACGAG 62.002 63.158 0.00 0.00 0.00 4.18
115 116 4.373116 GGCCCACTTCGCACGAGA 62.373 66.667 0.00 0.00 0.00 4.04
116 117 3.112709 GCCCACTTCGCACGAGAC 61.113 66.667 0.00 0.00 0.00 3.36
117 118 2.338620 CCCACTTCGCACGAGACA 59.661 61.111 0.00 0.00 0.00 3.41
118 119 1.300620 CCCACTTCGCACGAGACAA 60.301 57.895 0.00 0.00 0.00 3.18
119 120 0.878523 CCCACTTCGCACGAGACAAA 60.879 55.000 0.00 0.00 0.00 2.83
120 121 1.148310 CCACTTCGCACGAGACAAAT 58.852 50.000 0.00 0.00 0.00 2.32
121 122 1.136252 CCACTTCGCACGAGACAAATG 60.136 52.381 0.00 0.00 0.00 2.32
122 123 1.136252 CACTTCGCACGAGACAAATGG 60.136 52.381 0.00 0.00 0.00 3.16
123 124 0.443869 CTTCGCACGAGACAAATGGG 59.556 55.000 0.00 0.00 0.00 4.00
124 125 1.573829 TTCGCACGAGACAAATGGGC 61.574 55.000 0.00 0.00 0.00 5.36
125 126 2.877691 GCACGAGACAAATGGGCC 59.122 61.111 0.00 0.00 0.00 5.80
126 127 3.039202 GCACGAGACAAATGGGCCG 62.039 63.158 0.00 0.00 0.00 6.13
127 128 2.046314 ACGAGACAAATGGGCCGG 60.046 61.111 0.00 0.00 0.00 6.13
128 129 2.824041 CGAGACAAATGGGCCGGG 60.824 66.667 2.18 0.00 0.00 5.73
129 130 3.140814 GAGACAAATGGGCCGGGC 61.141 66.667 22.00 22.00 0.00 6.13
162 163 4.803426 CGTGAGCGAGCCCTCCAC 62.803 72.222 0.00 0.00 41.33 4.02
163 164 4.459089 GTGAGCGAGCCCTCCACC 62.459 72.222 0.00 0.00 0.00 4.61
169 170 4.785453 GAGCCCTCCACCCGCTTG 62.785 72.222 0.00 0.00 31.61 4.01
172 173 3.399181 CCCTCCACCCGCTTGCTA 61.399 66.667 0.00 0.00 0.00 3.49
173 174 2.668632 CCTCCACCCGCTTGCTAA 59.331 61.111 0.00 0.00 0.00 3.09
174 175 1.450312 CCTCCACCCGCTTGCTAAG 60.450 63.158 0.00 0.00 0.00 2.18
175 176 1.596934 CTCCACCCGCTTGCTAAGA 59.403 57.895 0.00 0.00 0.00 2.10
176 177 0.460987 CTCCACCCGCTTGCTAAGAG 60.461 60.000 0.00 0.00 0.00 2.85
177 178 2.109126 CCACCCGCTTGCTAAGAGC 61.109 63.158 0.00 0.00 42.82 4.09
188 189 3.269486 TGCTAAGAGCGAGCTATAACG 57.731 47.619 0.00 0.00 46.26 3.18
189 190 2.031069 TGCTAAGAGCGAGCTATAACGG 60.031 50.000 0.00 0.00 46.26 4.44
190 191 2.225963 GCTAAGAGCGAGCTATAACGGA 59.774 50.000 0.00 0.00 36.96 4.69
191 192 3.119779 GCTAAGAGCGAGCTATAACGGAT 60.120 47.826 0.00 0.00 36.96 4.18
192 193 3.562567 AAGAGCGAGCTATAACGGATC 57.437 47.619 0.00 0.00 0.00 3.36
193 194 1.813786 AGAGCGAGCTATAACGGATCC 59.186 52.381 0.00 0.00 0.00 3.36
194 195 0.889306 AGCGAGCTATAACGGATCCC 59.111 55.000 6.06 0.00 0.00 3.85
195 196 0.108756 GCGAGCTATAACGGATCCCC 60.109 60.000 6.06 0.00 0.00 4.81
206 207 2.917804 GGATCCCCGTTCTTCTCCT 58.082 57.895 0.00 0.00 0.00 3.69
207 208 1.205055 GGATCCCCGTTCTTCTCCTT 58.795 55.000 0.00 0.00 0.00 3.36
208 209 1.139256 GGATCCCCGTTCTTCTCCTTC 59.861 57.143 0.00 0.00 0.00 3.46
209 210 2.112190 GATCCCCGTTCTTCTCCTTCT 58.888 52.381 0.00 0.00 0.00 2.85
210 211 2.025636 TCCCCGTTCTTCTCCTTCTT 57.974 50.000 0.00 0.00 0.00 2.52
211 212 1.900486 TCCCCGTTCTTCTCCTTCTTC 59.100 52.381 0.00 0.00 0.00 2.87
212 213 1.066071 CCCCGTTCTTCTCCTTCTTCC 60.066 57.143 0.00 0.00 0.00 3.46
213 214 1.903183 CCCGTTCTTCTCCTTCTTCCT 59.097 52.381 0.00 0.00 0.00 3.36
214 215 2.093921 CCCGTTCTTCTCCTTCTTCCTC 60.094 54.545 0.00 0.00 0.00 3.71
215 216 2.093921 CCGTTCTTCTCCTTCTTCCTCC 60.094 54.545 0.00 0.00 0.00 4.30
216 217 2.093921 CGTTCTTCTCCTTCTTCCTCCC 60.094 54.545 0.00 0.00 0.00 4.30
217 218 2.237643 GTTCTTCTCCTTCTTCCTCCCC 59.762 54.545 0.00 0.00 0.00 4.81
218 219 1.725182 TCTTCTCCTTCTTCCTCCCCT 59.275 52.381 0.00 0.00 0.00 4.79
219 220 2.115427 CTTCTCCTTCTTCCTCCCCTC 58.885 57.143 0.00 0.00 0.00 4.30
220 221 0.340208 TCTCCTTCTTCCTCCCCTCC 59.660 60.000 0.00 0.00 0.00 4.30
221 222 0.692756 CTCCTTCTTCCTCCCCTCCC 60.693 65.000 0.00 0.00 0.00 4.30
222 223 1.694525 CCTTCTTCCTCCCCTCCCC 60.695 68.421 0.00 0.00 0.00 4.81
223 224 1.398234 CTTCTTCCTCCCCTCCCCT 59.602 63.158 0.00 0.00 0.00 4.79
224 225 0.692756 CTTCTTCCTCCCCTCCCCTC 60.693 65.000 0.00 0.00 0.00 4.30
225 226 2.040359 CTTCCTCCCCTCCCCTCC 60.040 72.222 0.00 0.00 0.00 4.30
226 227 3.707189 TTCCTCCCCTCCCCTCCC 61.707 72.222 0.00 0.00 0.00 4.30
229 230 4.179599 CTCCCCTCCCCTCCCCTC 62.180 77.778 0.00 0.00 0.00 4.30
234 235 4.179599 CTCCCCTCCCCTCCCCTC 62.180 77.778 0.00 0.00 0.00 4.30
269 270 4.388499 GGCTCCCGCGAGACCAAA 62.388 66.667 8.23 0.00 38.33 3.28
270 271 2.815647 GCTCCCGCGAGACCAAAG 60.816 66.667 8.23 0.00 38.52 2.77
271 272 2.970639 CTCCCGCGAGACCAAAGA 59.029 61.111 8.23 0.00 38.52 2.52
272 273 1.292223 CTCCCGCGAGACCAAAGAA 59.708 57.895 8.23 0.00 38.52 2.52
273 274 0.108138 CTCCCGCGAGACCAAAGAAT 60.108 55.000 8.23 0.00 38.52 2.40
274 275 0.108329 TCCCGCGAGACCAAAGAATC 60.108 55.000 8.23 0.00 0.00 2.52
275 276 1.090052 CCCGCGAGACCAAAGAATCC 61.090 60.000 8.23 0.00 0.00 3.01
276 277 0.391130 CCGCGAGACCAAAGAATCCA 60.391 55.000 8.23 0.00 0.00 3.41
277 278 1.438651 CGCGAGACCAAAGAATCCAA 58.561 50.000 0.00 0.00 0.00 3.53
278 279 1.394917 CGCGAGACCAAAGAATCCAAG 59.605 52.381 0.00 0.00 0.00 3.61
279 280 2.699954 GCGAGACCAAAGAATCCAAGA 58.300 47.619 0.00 0.00 0.00 3.02
280 281 3.074412 GCGAGACCAAAGAATCCAAGAA 58.926 45.455 0.00 0.00 0.00 2.52
281 282 3.120165 GCGAGACCAAAGAATCCAAGAAC 60.120 47.826 0.00 0.00 0.00 3.01
282 283 4.319177 CGAGACCAAAGAATCCAAGAACT 58.681 43.478 0.00 0.00 0.00 3.01
283 284 4.390297 CGAGACCAAAGAATCCAAGAACTC 59.610 45.833 0.00 0.00 0.00 3.01
284 285 4.319177 AGACCAAAGAATCCAAGAACTCG 58.681 43.478 0.00 0.00 0.00 4.18
285 286 4.040461 AGACCAAAGAATCCAAGAACTCGA 59.960 41.667 0.00 0.00 0.00 4.04
286 287 4.714632 ACCAAAGAATCCAAGAACTCGAA 58.285 39.130 0.00 0.00 0.00 3.71
287 288 5.130350 ACCAAAGAATCCAAGAACTCGAAA 58.870 37.500 0.00 0.00 0.00 3.46
288 289 5.592688 ACCAAAGAATCCAAGAACTCGAAAA 59.407 36.000 0.00 0.00 0.00 2.29
289 290 6.145535 CCAAAGAATCCAAGAACTCGAAAAG 58.854 40.000 0.00 0.00 0.00 2.27
290 291 5.363979 AAGAATCCAAGAACTCGAAAAGC 57.636 39.130 0.00 0.00 0.00 3.51
291 292 3.753797 AGAATCCAAGAACTCGAAAAGCC 59.246 43.478 0.00 0.00 0.00 4.35
292 293 1.892209 TCCAAGAACTCGAAAAGCCC 58.108 50.000 0.00 0.00 0.00 5.19
293 294 1.420138 TCCAAGAACTCGAAAAGCCCT 59.580 47.619 0.00 0.00 0.00 5.19
294 295 1.807142 CCAAGAACTCGAAAAGCCCTC 59.193 52.381 0.00 0.00 0.00 4.30
295 296 1.807142 CAAGAACTCGAAAAGCCCTCC 59.193 52.381 0.00 0.00 0.00 4.30
296 297 0.037232 AGAACTCGAAAAGCCCTCCG 60.037 55.000 0.00 0.00 0.00 4.63
297 298 1.636570 GAACTCGAAAAGCCCTCCGC 61.637 60.000 0.00 0.00 37.98 5.54
298 299 2.820037 CTCGAAAAGCCCTCCGCC 60.820 66.667 0.00 0.00 38.78 6.13
299 300 4.404098 TCGAAAAGCCCTCCGCCC 62.404 66.667 0.00 0.00 38.78 6.13
317 318 3.791586 GCTGGTGCTCCCTCCCTC 61.792 72.222 1.59 0.00 36.03 4.30
318 319 3.086600 CTGGTGCTCCCTCCCTCC 61.087 72.222 1.59 0.00 0.00 4.30
319 320 3.615811 TGGTGCTCCCTCCCTCCT 61.616 66.667 1.59 0.00 0.00 3.69
320 321 2.766229 GGTGCTCCCTCCCTCCTC 60.766 72.222 0.00 0.00 0.00 3.71
321 322 2.766229 GTGCTCCCTCCCTCCTCC 60.766 72.222 0.00 0.00 0.00 4.30
322 323 4.095400 TGCTCCCTCCCTCCTCCC 62.095 72.222 0.00 0.00 0.00 4.30
323 324 4.890306 GCTCCCTCCCTCCTCCCC 62.890 77.778 0.00 0.00 0.00 4.81
324 325 4.548513 CTCCCTCCCTCCTCCCCG 62.549 77.778 0.00 0.00 0.00 5.73
372 373 3.200593 CCGCAGCATGGAGAGCAC 61.201 66.667 0.00 0.00 35.86 4.40
373 374 3.200593 CGCAGCATGGAGAGCACC 61.201 66.667 0.00 0.00 35.86 5.01
374 375 3.200593 GCAGCATGGAGAGCACCG 61.201 66.667 0.00 0.00 35.86 4.94
375 376 3.200593 CAGCATGGAGAGCACCGC 61.201 66.667 0.00 0.00 0.00 5.68
376 377 4.479993 AGCATGGAGAGCACCGCC 62.480 66.667 0.00 0.00 35.05 6.13
377 378 4.479993 GCATGGAGAGCACCGCCT 62.480 66.667 0.00 0.00 35.56 5.52
378 379 2.202987 CATGGAGAGCACCGCCTC 60.203 66.667 1.19 0.00 35.56 4.70
379 380 3.842923 ATGGAGAGCACCGCCTCG 61.843 66.667 1.19 0.00 36.95 4.63
389 390 4.208686 CCGCCTCGGTGCTAGACC 62.209 72.222 0.00 0.00 42.73 3.85
397 398 4.874977 GTGCTAGACCGCGCCTCC 62.875 72.222 0.00 0.00 34.46 4.30
399 400 4.273257 GCTAGACCGCGCCTCCTC 62.273 72.222 0.00 0.00 0.00 3.71
711 712 3.513462 TTTTTCATACAGCGACGTGTG 57.487 42.857 0.00 5.75 31.46 3.82
712 713 1.424403 TTTCATACAGCGACGTGTGG 58.576 50.000 0.00 5.86 31.46 4.17
713 714 1.011968 TTCATACAGCGACGTGTGGC 61.012 55.000 0.00 0.00 34.35 5.01
727 728 3.941081 TGGCGTGCCAAGGAAAAA 58.059 50.000 11.96 0.00 44.12 1.94
744 745 2.651382 AAAAAGACGTAGGCCCACTT 57.349 45.000 0.00 0.00 0.00 3.16
745 746 2.180432 AAAAGACGTAGGCCCACTTC 57.820 50.000 0.00 0.00 0.00 3.01
746 747 0.037605 AAAGACGTAGGCCCACTTCG 60.038 55.000 0.00 0.00 44.39 3.79
747 748 2.502692 AAGACGTAGGCCCACTTCGC 62.503 60.000 0.00 0.00 42.86 4.70
748 749 3.291101 GACGTAGGCCCACTTCGCA 62.291 63.158 0.00 0.00 42.86 5.10
749 750 2.813908 CGTAGGCCCACTTCGCAC 60.814 66.667 0.00 0.00 33.28 5.34
750 751 2.813908 GTAGGCCCACTTCGCACG 60.814 66.667 0.00 0.00 0.00 5.34
751 752 2.992689 TAGGCCCACTTCGCACGA 60.993 61.111 0.00 0.00 0.00 4.35
752 753 3.001902 TAGGCCCACTTCGCACGAG 62.002 63.158 0.00 0.00 0.00 4.18
753 754 4.373116 GGCCCACTTCGCACGAGA 62.373 66.667 0.00 0.00 0.00 4.04
754 755 3.112709 GCCCACTTCGCACGAGAC 61.113 66.667 0.00 0.00 0.00 3.36
755 756 2.338620 CCCACTTCGCACGAGACA 59.661 61.111 0.00 0.00 0.00 3.41
756 757 1.300620 CCCACTTCGCACGAGACAA 60.301 57.895 0.00 0.00 0.00 3.18
757 758 0.878523 CCCACTTCGCACGAGACAAA 60.879 55.000 0.00 0.00 0.00 2.83
758 759 1.148310 CCACTTCGCACGAGACAAAT 58.852 50.000 0.00 0.00 0.00 2.32
759 760 1.136252 CCACTTCGCACGAGACAAATG 60.136 52.381 0.00 0.00 0.00 2.32
760 761 1.136252 CACTTCGCACGAGACAAATGG 60.136 52.381 0.00 0.00 0.00 3.16
761 762 0.443869 CTTCGCACGAGACAAATGGG 59.556 55.000 0.00 0.00 0.00 4.00
762 763 1.573829 TTCGCACGAGACAAATGGGC 61.574 55.000 0.00 0.00 0.00 5.36
763 764 2.877691 GCACGAGACAAATGGGCC 59.122 61.111 0.00 0.00 0.00 5.80
764 765 3.039202 GCACGAGACAAATGGGCCG 62.039 63.158 0.00 0.00 0.00 6.13
765 766 2.046314 ACGAGACAAATGGGCCGG 60.046 61.111 0.00 0.00 0.00 6.13
766 767 2.824041 CGAGACAAATGGGCCGGG 60.824 66.667 2.18 0.00 0.00 5.73
767 768 3.140814 GAGACAAATGGGCCGGGC 61.141 66.667 22.00 22.00 0.00 6.13
779 780 4.864334 CCGGGCCAGCAGGTCATC 62.864 72.222 4.39 0.00 43.06 2.92
788 789 3.250323 CAGGTCATCGCGCGTGAG 61.250 66.667 30.98 19.94 0.00 3.51
829 830 3.119779 GCTAAGAGCGAGCTATAACGGAT 60.120 47.826 0.00 0.00 36.96 4.18
858 859 0.340208 TCTCCTTCTTCCTCCCCTCC 59.660 60.000 0.00 0.00 0.00 4.30
859 860 0.692756 CTCCTTCTTCCTCCCCTCCC 60.693 65.000 0.00 0.00 0.00 4.30
860 861 1.694525 CCTTCTTCCTCCCCTCCCC 60.695 68.421 0.00 0.00 0.00 4.81
861 862 1.398234 CTTCTTCCTCCCCTCCCCT 59.602 63.158 0.00 0.00 0.00 4.79
862 863 0.692756 CTTCTTCCTCCCCTCCCCTC 60.693 65.000 0.00 0.00 0.00 4.30
863 864 2.040359 CTTCCTCCCCTCCCCTCC 60.040 72.222 0.00 0.00 0.00 4.30
864 865 3.707189 TTCCTCCCCTCCCCTCCC 61.707 72.222 0.00 0.00 0.00 4.30
1309 1310 1.198094 TCGGAATCTGGAGGTGGCAA 61.198 55.000 0.00 0.00 0.00 4.52
1368 1369 0.108424 CCGACTCAAAGGCCAGAGAG 60.108 60.000 22.03 18.32 35.83 3.20
1372 1373 0.540923 CTCAAAGGCCAGAGAGGAGG 59.459 60.000 5.01 0.00 41.22 4.30
1377 1378 1.762858 GGCCAGAGAGGAGGGTACC 60.763 68.421 2.17 2.17 45.00 3.34
1391 1392 1.692411 GGTACCTGCAAATGGATCCC 58.308 55.000 9.90 0.00 0.00 3.85
1496 1497 1.101331 GCATTCAAGAAGGCCTCCAG 58.899 55.000 5.23 0.00 41.71 3.86
1572 1578 4.154195 TCCTGCAAGAAAGTAAAGCGATTC 59.846 41.667 0.00 0.00 34.07 2.52
1574 1580 5.351465 CCTGCAAGAAAGTAAAGCGATTCTA 59.649 40.000 0.00 0.00 34.07 2.10
1614 1663 5.344743 TTGCTTGACCTCAGTTATCCTAG 57.655 43.478 0.00 0.00 0.00 3.02
1622 1671 7.130099 TGACCTCAGTTATCCTAGGTTTCATA 58.870 38.462 9.08 0.00 42.40 2.15
1798 1847 2.313945 ACTGCCTTACCTAGACCCTACA 59.686 50.000 0.00 0.00 0.00 2.74
1858 1907 6.765915 AAAGCTTTCCATGTTATCTTCTCC 57.234 37.500 5.69 0.00 0.00 3.71
2014 2063 1.443407 CCTGATAGCACCAGGGACG 59.557 63.158 10.20 0.00 45.66 4.79
2096 2145 5.987347 GCCAGGGTAAACTTTTAAAACTTCC 59.013 40.000 0.00 0.00 0.00 3.46
2275 2324 7.066284 GTCTCCTGAGTGCATACATGTAAAAAT 59.934 37.037 10.14 0.00 0.00 1.82
2276 2325 7.066163 TCTCCTGAGTGCATACATGTAAAAATG 59.934 37.037 10.14 5.81 0.00 2.32
2349 2398 5.183713 CCTTCACAATGTCAATTAAGGCTCA 59.816 40.000 0.00 0.00 27.51 4.26
2404 2453 5.093849 GTGGACTTATAACCCACTAGCAA 57.906 43.478 18.39 0.00 45.08 3.91
2418 2467 6.156256 ACCCACTAGCAAATCTTGAGTATGTA 59.844 38.462 0.00 0.00 0.00 2.29
2423 2472 9.973450 ACTAGCAAATCTTGAGTATGTATAGTG 57.027 33.333 0.00 0.00 0.00 2.74
2512 2561 0.957888 GACCTGTTGCCTGCTTCCTC 60.958 60.000 0.00 0.00 0.00 3.71
2571 2620 1.534595 CGGCATTACCAAGCAAGCATC 60.535 52.381 0.00 0.00 39.03 3.91
2660 3023 8.125978 ACTGATTTGAATGGTTCATGTATTGT 57.874 30.769 0.00 0.00 39.84 2.71
2661 3024 9.241919 ACTGATTTGAATGGTTCATGTATTGTA 57.758 29.630 0.00 0.00 39.84 2.41
2664 3027 9.385902 GATTTGAATGGTTCATGTATTGTATCG 57.614 33.333 0.00 0.00 39.84 2.92
2665 3028 6.859420 TGAATGGTTCATGTATTGTATCGG 57.141 37.500 0.00 0.00 34.08 4.18
2666 3029 6.587273 TGAATGGTTCATGTATTGTATCGGA 58.413 36.000 0.00 0.00 34.08 4.55
2667 3030 6.705825 TGAATGGTTCATGTATTGTATCGGAG 59.294 38.462 0.00 0.00 34.08 4.63
2668 3031 5.862678 TGGTTCATGTATTGTATCGGAGA 57.137 39.130 0.00 0.00 45.75 3.71
2669 3032 6.228616 TGGTTCATGTATTGTATCGGAGAA 57.771 37.500 0.00 0.00 43.58 2.87
2670 3033 6.826668 TGGTTCATGTATTGTATCGGAGAAT 58.173 36.000 0.00 0.00 43.58 2.40
2671 3034 7.279615 TGGTTCATGTATTGTATCGGAGAATT 58.720 34.615 0.00 0.00 43.58 2.17
2672 3035 7.773224 TGGTTCATGTATTGTATCGGAGAATTT 59.227 33.333 0.00 0.00 43.58 1.82
2673 3036 8.283291 GGTTCATGTATTGTATCGGAGAATTTC 58.717 37.037 0.00 0.00 43.58 2.17
2674 3037 7.637709 TCATGTATTGTATCGGAGAATTTCG 57.362 36.000 0.00 0.00 43.58 3.46
2675 3038 6.645003 TCATGTATTGTATCGGAGAATTTCGG 59.355 38.462 0.00 0.00 43.58 4.30
2676 3039 6.151663 TGTATTGTATCGGAGAATTTCGGA 57.848 37.500 0.00 0.00 43.58 4.55
2677 3040 6.755206 TGTATTGTATCGGAGAATTTCGGAT 58.245 36.000 12.07 12.07 44.94 4.18
2678 3041 7.214381 TGTATTGTATCGGAGAATTTCGGATT 58.786 34.615 12.42 0.00 41.53 3.01
2679 3042 5.984233 TTGTATCGGAGAATTTCGGATTG 57.016 39.130 12.42 0.00 41.53 2.67
2680 3043 5.270893 TGTATCGGAGAATTTCGGATTGA 57.729 39.130 12.42 0.00 41.53 2.57
2681 3044 5.853936 TGTATCGGAGAATTTCGGATTGAT 58.146 37.500 12.42 3.37 41.53 2.57
2682 3045 6.288294 TGTATCGGAGAATTTCGGATTGATT 58.712 36.000 12.42 0.00 41.53 2.57
2683 3046 7.438564 TGTATCGGAGAATTTCGGATTGATTA 58.561 34.615 12.42 0.00 41.53 1.75
2684 3047 8.094548 TGTATCGGAGAATTTCGGATTGATTAT 58.905 33.333 12.42 0.00 41.53 1.28
2685 3048 7.986085 ATCGGAGAATTTCGGATTGATTATT 57.014 32.000 0.00 0.00 41.53 1.40
2686 3049 7.189693 TCGGAGAATTTCGGATTGATTATTG 57.810 36.000 0.00 0.00 30.97 1.90
2687 3050 6.989759 TCGGAGAATTTCGGATTGATTATTGA 59.010 34.615 0.00 0.00 30.97 2.57
2688 3051 7.661437 TCGGAGAATTTCGGATTGATTATTGAT 59.339 33.333 0.00 0.00 30.97 2.57
2689 3052 7.747799 CGGAGAATTTCGGATTGATTATTGATG 59.252 37.037 0.00 0.00 0.00 3.07
2690 3053 8.571336 GGAGAATTTCGGATTGATTATTGATGT 58.429 33.333 0.00 0.00 0.00 3.06
2691 3054 9.604626 GAGAATTTCGGATTGATTATTGATGTC 57.395 33.333 0.00 0.00 0.00 3.06
2692 3055 9.123902 AGAATTTCGGATTGATTATTGATGTCA 57.876 29.630 0.00 0.00 0.00 3.58
2693 3056 9.390795 GAATTTCGGATTGATTATTGATGTCAG 57.609 33.333 0.00 0.00 0.00 3.51
2694 3057 5.929697 TCGGATTGATTATTGATGTCAGC 57.070 39.130 0.00 0.00 0.00 4.26
2695 3058 5.614308 TCGGATTGATTATTGATGTCAGCT 58.386 37.500 0.00 0.00 0.00 4.24
2696 3059 5.698089 TCGGATTGATTATTGATGTCAGCTC 59.302 40.000 0.00 0.00 0.00 4.09
2697 3060 5.699915 CGGATTGATTATTGATGTCAGCTCT 59.300 40.000 0.00 0.00 0.00 4.09
2698 3061 6.204301 CGGATTGATTATTGATGTCAGCTCTT 59.796 38.462 0.00 0.00 0.00 2.85
2699 3062 7.570875 CGGATTGATTATTGATGTCAGCTCTTC 60.571 40.741 0.00 0.00 0.00 2.87
2700 3063 7.228108 GGATTGATTATTGATGTCAGCTCTTCA 59.772 37.037 0.00 0.00 0.00 3.02
2701 3064 7.926674 TTGATTATTGATGTCAGCTCTTCAA 57.073 32.000 6.29 6.29 36.46 2.69
2702 3065 7.926674 TGATTATTGATGTCAGCTCTTCAAA 57.073 32.000 7.53 0.00 35.94 2.69
2703 3066 8.515695 TGATTATTGATGTCAGCTCTTCAAAT 57.484 30.769 7.53 0.23 35.94 2.32
2704 3067 8.403236 TGATTATTGATGTCAGCTCTTCAAATG 58.597 33.333 7.53 0.00 35.94 2.32
2705 3068 7.692460 TTATTGATGTCAGCTCTTCAAATGT 57.308 32.000 7.53 0.00 35.94 2.71
2706 3069 6.585695 ATTGATGTCAGCTCTTCAAATGTT 57.414 33.333 7.53 0.00 35.94 2.71
2707 3070 5.366829 TGATGTCAGCTCTTCAAATGTTG 57.633 39.130 0.00 0.00 0.00 3.33
2708 3071 4.216902 TGATGTCAGCTCTTCAAATGTTGG 59.783 41.667 0.00 0.00 0.00 3.77
2709 3072 2.886523 TGTCAGCTCTTCAAATGTTGGG 59.113 45.455 0.00 0.00 0.00 4.12
2710 3073 2.887152 GTCAGCTCTTCAAATGTTGGGT 59.113 45.455 0.00 0.00 0.00 4.51
2711 3074 3.057946 GTCAGCTCTTCAAATGTTGGGTC 60.058 47.826 0.00 0.00 0.00 4.46
2712 3075 2.886523 CAGCTCTTCAAATGTTGGGTCA 59.113 45.455 0.00 0.00 0.00 4.02
2713 3076 3.508793 CAGCTCTTCAAATGTTGGGTCAT 59.491 43.478 0.00 0.00 0.00 3.06
2714 3077 3.760684 AGCTCTTCAAATGTTGGGTCATC 59.239 43.478 0.00 0.00 0.00 2.92
2715 3078 3.119352 GCTCTTCAAATGTTGGGTCATCC 60.119 47.826 0.00 0.00 0.00 3.51
2716 3079 4.081406 CTCTTCAAATGTTGGGTCATCCA 58.919 43.478 0.00 0.00 45.43 3.41
2724 3087 3.837893 TGGGTCATCCAAACAAGCA 57.162 47.368 0.00 0.00 43.84 3.91
2725 3088 2.079170 TGGGTCATCCAAACAAGCAA 57.921 45.000 0.00 0.00 43.84 3.91
2726 3089 2.607499 TGGGTCATCCAAACAAGCAAT 58.393 42.857 0.00 0.00 43.84 3.56
2727 3090 2.299582 TGGGTCATCCAAACAAGCAATG 59.700 45.455 0.00 0.00 43.84 2.82
2728 3091 2.299867 GGGTCATCCAAACAAGCAATGT 59.700 45.455 0.00 0.00 38.73 2.71
2729 3092 3.319755 GGTCATCCAAACAAGCAATGTG 58.680 45.455 0.00 0.00 42.99 3.21
2730 3093 3.005684 GGTCATCCAAACAAGCAATGTGA 59.994 43.478 0.00 0.00 42.99 3.58
2731 3094 4.322198 GGTCATCCAAACAAGCAATGTGAT 60.322 41.667 0.00 0.00 42.99 3.06
2732 3095 5.105797 GGTCATCCAAACAAGCAATGTGATA 60.106 40.000 0.00 0.00 42.99 2.15
2733 3096 6.406177 GGTCATCCAAACAAGCAATGTGATAT 60.406 38.462 0.00 0.00 42.99 1.63
2734 3097 6.474427 GTCATCCAAACAAGCAATGTGATATG 59.526 38.462 0.00 0.35 42.99 1.78
2735 3098 5.327616 TCCAAACAAGCAATGTGATATGG 57.672 39.130 0.00 4.06 42.99 2.74
2736 3099 5.015515 TCCAAACAAGCAATGTGATATGGA 58.984 37.500 11.93 11.93 42.99 3.41
2737 3100 5.104374 CCAAACAAGCAATGTGATATGGAC 58.896 41.667 9.49 0.00 42.99 4.02
2738 3101 5.105635 CCAAACAAGCAATGTGATATGGACT 60.106 40.000 9.49 0.00 42.99 3.85
2739 3102 5.571784 AACAAGCAATGTGATATGGACTG 57.428 39.130 0.00 0.00 42.99 3.51
2740 3103 3.379372 ACAAGCAATGTGATATGGACTGC 59.621 43.478 0.00 0.00 41.93 4.40
2741 3104 3.286329 AGCAATGTGATATGGACTGCA 57.714 42.857 0.00 0.00 0.00 4.41
2742 3105 2.947652 AGCAATGTGATATGGACTGCAC 59.052 45.455 0.00 0.00 0.00 4.57
2743 3106 2.684374 GCAATGTGATATGGACTGCACA 59.316 45.455 0.00 0.00 44.31 4.57
2744 3107 3.488047 GCAATGTGATATGGACTGCACAC 60.488 47.826 0.00 0.00 43.17 3.82
2745 3108 3.920231 ATGTGATATGGACTGCACACT 57.080 42.857 0.00 0.00 43.17 3.55
2746 3109 5.118286 CAATGTGATATGGACTGCACACTA 58.882 41.667 0.00 0.00 43.17 2.74
2747 3110 4.123497 TGTGATATGGACTGCACACTAC 57.877 45.455 0.00 0.00 36.44 2.73
2748 3111 3.118775 TGTGATATGGACTGCACACTACC 60.119 47.826 0.00 0.00 36.44 3.18
2749 3112 3.103742 TGATATGGACTGCACACTACCA 58.896 45.455 0.00 0.00 35.09 3.25
2750 3113 3.711190 TGATATGGACTGCACACTACCAT 59.289 43.478 0.00 0.00 42.76 3.55
2751 3114 2.698855 ATGGACTGCACACTACCATC 57.301 50.000 0.00 0.00 36.78 3.51
2752 3115 1.347062 TGGACTGCACACTACCATCA 58.653 50.000 0.00 0.00 0.00 3.07
2753 3116 1.908619 TGGACTGCACACTACCATCAT 59.091 47.619 0.00 0.00 0.00 2.45
2754 3117 2.305635 TGGACTGCACACTACCATCATT 59.694 45.455 0.00 0.00 0.00 2.57
2755 3118 3.244875 TGGACTGCACACTACCATCATTT 60.245 43.478 0.00 0.00 0.00 2.32
2756 3119 3.758554 GGACTGCACACTACCATCATTTT 59.241 43.478 0.00 0.00 0.00 1.82
2757 3120 4.379813 GGACTGCACACTACCATCATTTTG 60.380 45.833 0.00 0.00 0.00 2.44
2772 3135 6.090358 CCATCATTTTGCAATTTGACTGACTC 59.910 38.462 12.48 0.00 0.00 3.36
2777 3140 9.282247 CATTTTGCAATTTGACTGACTCTATAC 57.718 33.333 0.00 0.00 0.00 1.47
2898 3261 7.280876 TGCAGATTTAGATGTATTTCTGACCAC 59.719 37.037 11.55 0.00 34.00 4.16
2912 3277 5.168526 TCTGACCACGAAAAATCTTTGTG 57.831 39.130 0.00 0.00 0.00 3.33
2937 3304 9.098355 TGTTATGATTCTGTATGAACTAACTGC 57.902 33.333 0.00 0.00 37.52 4.40
2947 3314 6.483307 TGTATGAACTAACTGCAGATAATGGC 59.517 38.462 23.35 4.52 0.00 4.40
2949 3316 2.213499 ACTAACTGCAGATAATGGCGC 58.787 47.619 23.35 0.00 0.00 6.53
2986 3353 5.414454 TGAATGTTACTTCTGGTTACATGGC 59.586 40.000 0.00 0.09 44.25 4.40
2987 3354 4.359434 TGTTACTTCTGGTTACATGGCA 57.641 40.909 0.00 0.00 33.33 4.92
3003 3371 1.144708 TGGCATGTTCTTGGTTCCTGA 59.855 47.619 0.00 0.00 0.00 3.86
3004 3372 2.225091 TGGCATGTTCTTGGTTCCTGAT 60.225 45.455 0.00 0.00 0.00 2.90
3005 3373 3.010027 TGGCATGTTCTTGGTTCCTGATA 59.990 43.478 0.00 0.00 0.00 2.15
3006 3374 3.378427 GGCATGTTCTTGGTTCCTGATAC 59.622 47.826 0.00 0.00 0.00 2.24
3007 3375 3.378427 GCATGTTCTTGGTTCCTGATACC 59.622 47.826 0.00 0.00 36.17 2.73
3008 3376 4.848357 CATGTTCTTGGTTCCTGATACCT 58.152 43.478 0.00 0.00 36.60 3.08
3009 3377 4.993705 TGTTCTTGGTTCCTGATACCTT 57.006 40.909 0.00 0.00 36.60 3.50
3010 3378 5.319043 TGTTCTTGGTTCCTGATACCTTT 57.681 39.130 0.00 0.00 36.60 3.11
3011 3379 6.442541 TGTTCTTGGTTCCTGATACCTTTA 57.557 37.500 0.00 0.00 36.60 1.85
3012 3380 7.027874 TGTTCTTGGTTCCTGATACCTTTAT 57.972 36.000 0.00 0.00 36.60 1.40
3013 3381 7.466804 TGTTCTTGGTTCCTGATACCTTTATT 58.533 34.615 0.00 0.00 36.60 1.40
3014 3382 7.947890 TGTTCTTGGTTCCTGATACCTTTATTT 59.052 33.333 0.00 0.00 36.60 1.40
3015 3383 9.457436 GTTCTTGGTTCCTGATACCTTTATTTA 57.543 33.333 0.00 0.00 36.60 1.40
3019 3387 9.983024 TTGGTTCCTGATACCTTTATTTAATCA 57.017 29.630 0.00 0.00 36.60 2.57
3020 3388 9.983024 TGGTTCCTGATACCTTTATTTAATCAA 57.017 29.630 0.00 0.00 36.60 2.57
3055 3423 9.865321 ATGTTATTTCAGTGAAAATCATCTTGG 57.135 29.630 21.57 0.00 35.11 3.61
3056 3424 8.859090 TGTTATTTCAGTGAAAATCATCTTGGT 58.141 29.630 21.57 4.54 35.11 3.67
3057 3425 9.696917 GTTATTTCAGTGAAAATCATCTTGGTT 57.303 29.630 21.57 4.06 35.11 3.67
3059 3427 8.822652 ATTTCAGTGAAAATCATCTTGGTTTC 57.177 30.769 21.57 0.00 35.11 2.78
3060 3428 6.957920 TCAGTGAAAATCATCTTGGTTTCA 57.042 33.333 0.00 0.00 37.58 2.69
3061 3429 7.528996 TCAGTGAAAATCATCTTGGTTTCAT 57.471 32.000 0.00 0.00 40.85 2.57
3062 3430 7.954835 TCAGTGAAAATCATCTTGGTTTCATT 58.045 30.769 0.00 0.00 40.85 2.57
3063 3431 8.423349 TCAGTGAAAATCATCTTGGTTTCATTT 58.577 29.630 0.00 0.00 40.85 2.32
3064 3432 8.492748 CAGTGAAAATCATCTTGGTTTCATTTG 58.507 33.333 1.46 1.21 40.85 2.32
3065 3433 8.206189 AGTGAAAATCATCTTGGTTTCATTTGT 58.794 29.630 1.46 0.00 40.85 2.83
3066 3434 8.277713 GTGAAAATCATCTTGGTTTCATTTGTG 58.722 33.333 1.46 0.00 40.85 3.33
3067 3435 8.202811 TGAAAATCATCTTGGTTTCATTTGTGA 58.797 29.630 0.00 0.00 35.60 3.58
3068 3436 7.951530 AAATCATCTTGGTTTCATTTGTGAC 57.048 32.000 0.00 0.00 0.00 3.67
3069 3437 6.906157 ATCATCTTGGTTTCATTTGTGACT 57.094 33.333 0.00 0.00 0.00 3.41
3070 3438 6.713762 TCATCTTGGTTTCATTTGTGACTT 57.286 33.333 0.00 0.00 0.00 3.01
3071 3439 6.506147 TCATCTTGGTTTCATTTGTGACTTG 58.494 36.000 0.00 0.00 0.00 3.16
3072 3440 4.681744 TCTTGGTTTCATTTGTGACTTGC 58.318 39.130 0.00 0.00 0.00 4.01
3073 3441 4.159321 TCTTGGTTTCATTTGTGACTTGCA 59.841 37.500 0.00 0.00 0.00 4.08
3074 3442 4.044336 TGGTTTCATTTGTGACTTGCAG 57.956 40.909 0.00 0.00 0.00 4.41
3075 3443 3.446873 TGGTTTCATTTGTGACTTGCAGT 59.553 39.130 0.00 0.00 0.00 4.40
3076 3444 4.081752 TGGTTTCATTTGTGACTTGCAGTT 60.082 37.500 0.00 0.00 0.00 3.16
3077 3445 5.126222 TGGTTTCATTTGTGACTTGCAGTTA 59.874 36.000 0.00 0.00 0.00 2.24
3078 3446 6.183360 TGGTTTCATTTGTGACTTGCAGTTAT 60.183 34.615 0.00 0.00 0.00 1.89
3079 3447 7.013750 TGGTTTCATTTGTGACTTGCAGTTATA 59.986 33.333 0.00 0.00 0.00 0.98
3080 3448 8.028938 GGTTTCATTTGTGACTTGCAGTTATAT 58.971 33.333 0.00 0.00 0.00 0.86
3085 3453 9.454585 CATTTGTGACTTGCAGTTATATATTGG 57.545 33.333 0.00 0.00 0.00 3.16
3086 3454 8.574251 TTTGTGACTTGCAGTTATATATTGGT 57.426 30.769 0.00 0.00 0.00 3.67
3087 3455 8.574251 TTGTGACTTGCAGTTATATATTGGTT 57.426 30.769 0.00 0.00 0.00 3.67
3088 3456 8.574251 TGTGACTTGCAGTTATATATTGGTTT 57.426 30.769 0.00 0.00 0.00 3.27
3089 3457 8.673711 TGTGACTTGCAGTTATATATTGGTTTC 58.326 33.333 0.00 0.00 0.00 2.78
3090 3458 7.850982 GTGACTTGCAGTTATATATTGGTTTCG 59.149 37.037 0.00 0.00 0.00 3.46
3091 3459 7.011950 TGACTTGCAGTTATATATTGGTTTCGG 59.988 37.037 0.00 0.00 0.00 4.30
3092 3460 6.826741 ACTTGCAGTTATATATTGGTTTCGGT 59.173 34.615 0.00 0.00 0.00 4.69
3093 3461 6.854496 TGCAGTTATATATTGGTTTCGGTC 57.146 37.500 0.00 0.00 0.00 4.79
3094 3462 5.761234 TGCAGTTATATATTGGTTTCGGTCC 59.239 40.000 0.00 0.00 0.00 4.46
3095 3463 5.107220 GCAGTTATATATTGGTTTCGGTCCG 60.107 44.000 4.39 4.39 0.00 4.79
3096 3464 6.218019 CAGTTATATATTGGTTTCGGTCCGA 58.782 40.000 10.71 10.71 0.00 4.55
3097 3465 6.145048 CAGTTATATATTGGTTTCGGTCCGAC 59.855 42.308 15.07 3.71 34.89 4.79
3098 3466 4.675976 ATATATTGGTTTCGGTCCGACA 57.324 40.909 15.07 4.29 34.89 4.35
3099 3467 2.835580 TATTGGTTTCGGTCCGACAA 57.164 45.000 15.07 15.44 34.89 3.18
3100 3468 1.232119 ATTGGTTTCGGTCCGACAAC 58.768 50.000 15.07 19.27 34.89 3.32
3101 3469 0.107800 TTGGTTTCGGTCCGACAACA 60.108 50.000 26.31 21.95 34.89 3.33
3102 3470 0.107800 TGGTTTCGGTCCGACAACAA 60.108 50.000 26.31 19.22 30.23 2.83
3103 3471 0.305617 GGTTTCGGTCCGACAACAAC 59.694 55.000 26.31 21.63 34.89 3.32
3104 3472 1.008329 GTTTCGGTCCGACAACAACA 58.992 50.000 15.07 0.00 34.89 3.33
3105 3473 1.600485 GTTTCGGTCCGACAACAACAT 59.400 47.619 15.07 0.00 34.89 2.71
3106 3474 1.956297 TTCGGTCCGACAACAACATT 58.044 45.000 15.07 0.00 34.89 2.71
3107 3475 1.956297 TCGGTCCGACAACAACATTT 58.044 45.000 10.71 0.00 0.00 2.32
3108 3476 2.290464 TCGGTCCGACAACAACATTTT 58.710 42.857 10.71 0.00 0.00 1.82
3109 3477 2.683867 TCGGTCCGACAACAACATTTTT 59.316 40.909 10.71 0.00 0.00 1.94
3133 3501 9.438228 TTTTGGTCTATGATTACGTACAAATGA 57.562 29.630 0.00 0.00 0.00 2.57
3134 3502 9.438228 TTTGGTCTATGATTACGTACAAATGAA 57.562 29.630 0.00 0.00 0.00 2.57
3135 3503 9.438228 TTGGTCTATGATTACGTACAAATGAAA 57.562 29.630 0.00 0.00 0.00 2.69
3136 3504 9.607988 TGGTCTATGATTACGTACAAATGAAAT 57.392 29.630 0.00 0.00 0.00 2.17
3161 3529 7.480760 AACTTCTAAATAATGTTGCCATGGT 57.519 32.000 14.67 0.00 0.00 3.55
3162 3530 8.588290 AACTTCTAAATAATGTTGCCATGGTA 57.412 30.769 14.67 5.86 0.00 3.25
3163 3531 8.766994 ACTTCTAAATAATGTTGCCATGGTAT 57.233 30.769 14.67 0.00 0.00 2.73
3164 3532 8.632679 ACTTCTAAATAATGTTGCCATGGTATG 58.367 33.333 14.67 0.00 0.00 2.39
3173 3541 3.594453 CCATGGTATGGGTGTGCTT 57.406 52.632 2.57 0.00 46.86 3.91
3174 3542 1.392589 CCATGGTATGGGTGTGCTTC 58.607 55.000 2.57 0.00 46.86 3.86
3175 3543 1.340893 CCATGGTATGGGTGTGCTTCA 60.341 52.381 2.57 0.00 46.86 3.02
3176 3544 2.019249 CATGGTATGGGTGTGCTTCAG 58.981 52.381 0.00 0.00 0.00 3.02
3177 3545 0.322456 TGGTATGGGTGTGCTTCAGC 60.322 55.000 0.00 0.00 43.02 4.26
3178 3546 0.035056 GGTATGGGTGTGCTTCAGCT 60.035 55.000 0.00 0.00 43.26 4.24
3179 3547 1.614317 GGTATGGGTGTGCTTCAGCTT 60.614 52.381 0.00 3.60 43.26 3.74
3180 3548 2.162681 GTATGGGTGTGCTTCAGCTTT 58.837 47.619 0.00 3.34 43.26 3.51
3181 3549 1.708341 ATGGGTGTGCTTCAGCTTTT 58.292 45.000 0.00 0.00 43.26 2.27
3182 3550 1.484038 TGGGTGTGCTTCAGCTTTTT 58.516 45.000 0.00 0.00 43.26 1.94
3183 3551 2.660572 TGGGTGTGCTTCAGCTTTTTA 58.339 42.857 0.00 0.00 43.26 1.52
3184 3552 3.027412 TGGGTGTGCTTCAGCTTTTTAA 58.973 40.909 0.00 0.00 43.26 1.52
3185 3553 3.449018 TGGGTGTGCTTCAGCTTTTTAAA 59.551 39.130 0.00 0.00 43.26 1.52
3186 3554 3.802139 GGGTGTGCTTCAGCTTTTTAAAC 59.198 43.478 0.00 0.00 43.26 2.01
3187 3555 4.429108 GGTGTGCTTCAGCTTTTTAAACA 58.571 39.130 0.00 0.00 42.66 2.83
3188 3556 5.049828 GGTGTGCTTCAGCTTTTTAAACAT 58.950 37.500 0.00 0.00 42.66 2.71
3189 3557 5.523552 GGTGTGCTTCAGCTTTTTAAACATT 59.476 36.000 0.00 0.00 42.66 2.71
3190 3558 6.292328 GGTGTGCTTCAGCTTTTTAAACATTC 60.292 38.462 0.00 0.00 42.66 2.67
3191 3559 6.476706 GTGTGCTTCAGCTTTTTAAACATTCT 59.523 34.615 0.00 0.00 42.66 2.40
3192 3560 7.010460 GTGTGCTTCAGCTTTTTAAACATTCTT 59.990 33.333 0.00 0.00 42.66 2.52
3193 3561 7.010367 TGTGCTTCAGCTTTTTAAACATTCTTG 59.990 33.333 0.00 0.00 42.66 3.02
3194 3562 6.018832 TGCTTCAGCTTTTTAAACATTCTTGC 60.019 34.615 0.00 0.00 42.66 4.01
3195 3563 6.201615 GCTTCAGCTTTTTAAACATTCTTGCT 59.798 34.615 0.00 0.00 38.21 3.91
3196 3564 7.568315 GCTTCAGCTTTTTAAACATTCTTGCTC 60.568 37.037 0.00 0.00 38.21 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 3.073274 GCTTCTGAGCTCCCCTAAAAA 57.927 47.619 12.15 0.00 45.65 1.94
20 21 2.789409 GCTTCTGAGCTCCCCTAAAA 57.211 50.000 12.15 0.00 45.65 1.52
31 32 4.185467 AGTCACACTACATGCTTCTGAG 57.815 45.455 0.00 0.00 0.00 3.35
32 33 4.607293 AAGTCACACTACATGCTTCTGA 57.393 40.909 0.00 0.00 0.00 3.27
33 34 5.679734 AAAAGTCACACTACATGCTTCTG 57.320 39.130 0.00 0.00 0.00 3.02
53 54 2.222213 CCACACGTCGCTGTATGAAAAA 59.778 45.455 0.00 0.00 0.00 1.94
54 55 1.795872 CCACACGTCGCTGTATGAAAA 59.204 47.619 0.00 0.00 0.00 2.29
55 56 1.424403 CCACACGTCGCTGTATGAAA 58.576 50.000 0.00 0.00 0.00 2.69
56 57 1.011968 GCCACACGTCGCTGTATGAA 61.012 55.000 0.00 0.00 0.00 2.57
57 58 1.445410 GCCACACGTCGCTGTATGA 60.445 57.895 0.00 0.00 0.00 2.15
58 59 2.788176 CGCCACACGTCGCTGTATG 61.788 63.158 0.00 0.00 36.87 2.39
59 60 2.506217 CGCCACACGTCGCTGTAT 60.506 61.111 0.00 0.00 36.87 2.29
72 73 3.941081 TTTTTCCTTGGCACGCCA 58.059 50.000 6.67 6.67 45.63 5.69
87 88 2.501261 GAAGTGGGCCTACGTCTTTTT 58.499 47.619 24.39 8.29 0.00 1.94
88 89 1.607251 CGAAGTGGGCCTACGTCTTTT 60.607 52.381 27.39 11.45 0.00 2.27
89 90 0.037605 CGAAGTGGGCCTACGTCTTT 60.038 55.000 27.39 11.81 0.00 2.52
90 91 1.590147 CGAAGTGGGCCTACGTCTT 59.410 57.895 27.39 12.16 0.00 3.01
91 92 3.003113 GCGAAGTGGGCCTACGTCT 62.003 63.158 27.39 11.71 0.00 4.18
92 93 2.508663 GCGAAGTGGGCCTACGTC 60.509 66.667 22.39 22.39 0.00 4.34
93 94 3.307906 TGCGAAGTGGGCCTACGT 61.308 61.111 14.26 11.06 0.00 3.57
94 95 2.813908 GTGCGAAGTGGGCCTACG 60.814 66.667 14.26 3.15 0.00 3.51
95 96 2.813908 CGTGCGAAGTGGGCCTAC 60.814 66.667 12.09 12.09 0.00 3.18
96 97 2.992689 TCGTGCGAAGTGGGCCTA 60.993 61.111 4.53 0.00 0.00 3.93
97 98 4.379243 CTCGTGCGAAGTGGGCCT 62.379 66.667 4.53 0.00 0.00 5.19
98 99 4.373116 TCTCGTGCGAAGTGGGCC 62.373 66.667 0.00 0.00 0.00 5.80
99 100 3.112709 GTCTCGTGCGAAGTGGGC 61.113 66.667 0.00 0.00 0.00 5.36
100 101 0.878523 TTTGTCTCGTGCGAAGTGGG 60.879 55.000 0.00 0.00 0.00 4.61
101 102 1.136252 CATTTGTCTCGTGCGAAGTGG 60.136 52.381 0.00 0.00 0.00 4.00
102 103 1.136252 CCATTTGTCTCGTGCGAAGTG 60.136 52.381 0.00 0.00 0.00 3.16
103 104 1.148310 CCATTTGTCTCGTGCGAAGT 58.852 50.000 0.00 0.00 0.00 3.01
104 105 0.443869 CCCATTTGTCTCGTGCGAAG 59.556 55.000 0.00 0.00 0.00 3.79
105 106 1.573829 GCCCATTTGTCTCGTGCGAA 61.574 55.000 0.00 0.00 0.00 4.70
106 107 2.032634 GCCCATTTGTCTCGTGCGA 61.033 57.895 0.00 0.00 0.00 5.10
107 108 2.480555 GCCCATTTGTCTCGTGCG 59.519 61.111 0.00 0.00 0.00 5.34
108 109 2.877691 GGCCCATTTGTCTCGTGC 59.122 61.111 0.00 0.00 0.00 5.34
109 110 2.398554 CCGGCCCATTTGTCTCGTG 61.399 63.158 0.00 0.00 0.00 4.35
110 111 2.046314 CCGGCCCATTTGTCTCGT 60.046 61.111 0.00 0.00 0.00 4.18
111 112 2.824041 CCCGGCCCATTTGTCTCG 60.824 66.667 0.00 0.00 0.00 4.04
112 113 3.140814 GCCCGGCCCATTTGTCTC 61.141 66.667 0.00 0.00 0.00 3.36
113 114 4.759205 GGCCCGGCCCATTTGTCT 62.759 66.667 18.83 0.00 44.06 3.41
124 125 4.864334 GATGACCTGCTGGCCCGG 62.864 72.222 9.95 0.00 36.63 5.73
133 134 3.250323 CTCACGCGCGATGACCTG 61.250 66.667 39.36 23.16 0.00 4.00
166 167 3.666334 CGTTATAGCTCGCTCTTAGCAAG 59.334 47.826 0.00 0.00 42.58 4.01
167 168 3.550233 CCGTTATAGCTCGCTCTTAGCAA 60.550 47.826 0.00 0.00 42.58 3.91
168 169 2.031069 CCGTTATAGCTCGCTCTTAGCA 60.031 50.000 0.00 0.00 42.58 3.49
169 170 2.225963 TCCGTTATAGCTCGCTCTTAGC 59.774 50.000 0.00 0.00 40.40 3.09
170 171 4.437659 GGATCCGTTATAGCTCGCTCTTAG 60.438 50.000 0.00 0.00 0.00 2.18
171 172 3.439476 GGATCCGTTATAGCTCGCTCTTA 59.561 47.826 0.00 0.00 0.00 2.10
172 173 2.229302 GGATCCGTTATAGCTCGCTCTT 59.771 50.000 0.00 0.00 0.00 2.85
173 174 1.813786 GGATCCGTTATAGCTCGCTCT 59.186 52.381 0.00 0.00 0.00 4.09
174 175 1.135344 GGGATCCGTTATAGCTCGCTC 60.135 57.143 5.45 0.00 0.00 5.03
175 176 0.889306 GGGATCCGTTATAGCTCGCT 59.111 55.000 5.45 0.00 0.00 4.93
176 177 0.108756 GGGGATCCGTTATAGCTCGC 60.109 60.000 5.45 0.00 0.00 5.03
188 189 1.139256 GAAGGAGAAGAACGGGGATCC 59.861 57.143 1.92 1.92 0.00 3.36
189 190 2.112190 AGAAGGAGAAGAACGGGGATC 58.888 52.381 0.00 0.00 0.00 3.36
190 191 2.255770 AGAAGGAGAAGAACGGGGAT 57.744 50.000 0.00 0.00 0.00 3.85
191 192 1.900486 GAAGAAGGAGAAGAACGGGGA 59.100 52.381 0.00 0.00 0.00 4.81
192 193 1.066071 GGAAGAAGGAGAAGAACGGGG 60.066 57.143 0.00 0.00 0.00 5.73
193 194 1.903183 AGGAAGAAGGAGAAGAACGGG 59.097 52.381 0.00 0.00 0.00 5.28
194 195 2.093921 GGAGGAAGAAGGAGAAGAACGG 60.094 54.545 0.00 0.00 0.00 4.44
195 196 2.093921 GGGAGGAAGAAGGAGAAGAACG 60.094 54.545 0.00 0.00 0.00 3.95
196 197 2.237643 GGGGAGGAAGAAGGAGAAGAAC 59.762 54.545 0.00 0.00 0.00 3.01
197 198 2.114506 AGGGGAGGAAGAAGGAGAAGAA 59.885 50.000 0.00 0.00 0.00 2.52
198 199 1.725182 AGGGGAGGAAGAAGGAGAAGA 59.275 52.381 0.00 0.00 0.00 2.87
199 200 2.115427 GAGGGGAGGAAGAAGGAGAAG 58.885 57.143 0.00 0.00 0.00 2.85
200 201 1.273896 GGAGGGGAGGAAGAAGGAGAA 60.274 57.143 0.00 0.00 0.00 2.87
201 202 0.340208 GGAGGGGAGGAAGAAGGAGA 59.660 60.000 0.00 0.00 0.00 3.71
202 203 0.692756 GGGAGGGGAGGAAGAAGGAG 60.693 65.000 0.00 0.00 0.00 3.69
203 204 1.396594 GGGAGGGGAGGAAGAAGGA 59.603 63.158 0.00 0.00 0.00 3.36
204 205 1.694525 GGGGAGGGGAGGAAGAAGG 60.695 68.421 0.00 0.00 0.00 3.46
205 206 0.692756 GAGGGGAGGGGAGGAAGAAG 60.693 65.000 0.00 0.00 0.00 2.85
206 207 1.396594 GAGGGGAGGGGAGGAAGAA 59.603 63.158 0.00 0.00 0.00 2.52
207 208 2.647949 GGAGGGGAGGGGAGGAAGA 61.648 68.421 0.00 0.00 0.00 2.87
208 209 2.040359 GGAGGGGAGGGGAGGAAG 60.040 72.222 0.00 0.00 0.00 3.46
209 210 3.707189 GGGAGGGGAGGGGAGGAA 61.707 72.222 0.00 0.00 0.00 3.36
212 213 4.179599 GAGGGGAGGGGAGGGGAG 62.180 77.778 0.00 0.00 0.00 4.30
217 218 4.179599 GAGGGGAGGGGAGGGGAG 62.180 77.778 0.00 0.00 0.00 4.30
254 255 0.108138 ATTCTTTGGTCTCGCGGGAG 60.108 55.000 22.60 22.60 41.89 4.30
255 256 0.108329 GATTCTTTGGTCTCGCGGGA 60.108 55.000 3.45 3.45 0.00 5.14
256 257 1.090052 GGATTCTTTGGTCTCGCGGG 61.090 60.000 6.13 1.01 0.00 6.13
257 258 0.391130 TGGATTCTTTGGTCTCGCGG 60.391 55.000 6.13 0.00 0.00 6.46
258 259 1.394917 CTTGGATTCTTTGGTCTCGCG 59.605 52.381 0.00 0.00 0.00 5.87
259 260 2.699954 TCTTGGATTCTTTGGTCTCGC 58.300 47.619 0.00 0.00 0.00 5.03
260 261 4.319177 AGTTCTTGGATTCTTTGGTCTCG 58.681 43.478 0.00 0.00 0.00 4.04
261 262 4.390297 CGAGTTCTTGGATTCTTTGGTCTC 59.610 45.833 0.00 0.00 0.00 3.36
262 263 4.040461 TCGAGTTCTTGGATTCTTTGGTCT 59.960 41.667 0.00 0.00 0.00 3.85
263 264 4.315803 TCGAGTTCTTGGATTCTTTGGTC 58.684 43.478 0.00 0.00 0.00 4.02
264 265 4.351874 TCGAGTTCTTGGATTCTTTGGT 57.648 40.909 0.00 0.00 0.00 3.67
265 266 5.689383 TTTCGAGTTCTTGGATTCTTTGG 57.311 39.130 0.00 0.00 0.00 3.28
266 267 5.626955 GCTTTTCGAGTTCTTGGATTCTTTG 59.373 40.000 0.00 0.00 0.00 2.77
267 268 5.278512 GGCTTTTCGAGTTCTTGGATTCTTT 60.279 40.000 0.00 0.00 0.00 2.52
268 269 4.216472 GGCTTTTCGAGTTCTTGGATTCTT 59.784 41.667 0.00 0.00 0.00 2.52
269 270 3.753797 GGCTTTTCGAGTTCTTGGATTCT 59.246 43.478 0.00 0.00 0.00 2.40
270 271 3.119814 GGGCTTTTCGAGTTCTTGGATTC 60.120 47.826 0.00 0.00 0.00 2.52
271 272 2.820197 GGGCTTTTCGAGTTCTTGGATT 59.180 45.455 0.00 0.00 0.00 3.01
272 273 2.040412 AGGGCTTTTCGAGTTCTTGGAT 59.960 45.455 0.00 0.00 0.00 3.41
273 274 1.420138 AGGGCTTTTCGAGTTCTTGGA 59.580 47.619 0.00 0.00 0.00 3.53
274 275 1.807142 GAGGGCTTTTCGAGTTCTTGG 59.193 52.381 0.00 0.00 0.00 3.61
275 276 1.807142 GGAGGGCTTTTCGAGTTCTTG 59.193 52.381 0.00 0.00 0.00 3.02
276 277 1.608283 CGGAGGGCTTTTCGAGTTCTT 60.608 52.381 0.00 0.00 0.00 2.52
277 278 0.037232 CGGAGGGCTTTTCGAGTTCT 60.037 55.000 0.00 0.00 0.00 3.01
278 279 1.636570 GCGGAGGGCTTTTCGAGTTC 61.637 60.000 0.00 0.00 39.11 3.01
279 280 1.671379 GCGGAGGGCTTTTCGAGTT 60.671 57.895 0.00 0.00 39.11 3.01
280 281 2.047179 GCGGAGGGCTTTTCGAGT 60.047 61.111 0.00 0.00 39.11 4.18
281 282 2.820037 GGCGGAGGGCTTTTCGAG 60.820 66.667 0.00 0.00 42.94 4.04
282 283 4.404098 GGGCGGAGGGCTTTTCGA 62.404 66.667 0.00 0.00 42.94 3.71
300 301 3.791586 GAGGGAGGGAGCACCAGC 61.792 72.222 1.58 0.00 43.89 4.85
301 302 3.086600 GGAGGGAGGGAGCACCAG 61.087 72.222 1.58 0.00 43.89 4.00
302 303 3.615811 AGGAGGGAGGGAGCACCA 61.616 66.667 1.58 0.00 43.89 4.17
303 304 2.766229 GAGGAGGGAGGGAGCACC 60.766 72.222 0.00 0.00 40.67 5.01
304 305 2.766229 GGAGGAGGGAGGGAGCAC 60.766 72.222 0.00 0.00 0.00 4.40
305 306 4.095400 GGGAGGAGGGAGGGAGCA 62.095 72.222 0.00 0.00 0.00 4.26
306 307 4.890306 GGGGAGGAGGGAGGGAGC 62.890 77.778 0.00 0.00 0.00 4.70
307 308 4.548513 CGGGGAGGAGGGAGGGAG 62.549 77.778 0.00 0.00 0.00 4.30
355 356 3.200593 GTGCTCTCCATGCTGCGG 61.201 66.667 0.00 0.00 0.00 5.69
356 357 3.200593 GGTGCTCTCCATGCTGCG 61.201 66.667 0.00 0.00 0.00 5.18
357 358 3.200593 CGGTGCTCTCCATGCTGC 61.201 66.667 0.00 0.00 0.00 5.25
358 359 3.200593 GCGGTGCTCTCCATGCTG 61.201 66.667 0.00 0.00 0.00 4.41
359 360 4.479993 GGCGGTGCTCTCCATGCT 62.480 66.667 0.00 0.00 0.00 3.79
360 361 4.479993 AGGCGGTGCTCTCCATGC 62.480 66.667 0.00 0.00 0.00 4.06
361 362 2.202987 GAGGCGGTGCTCTCCATG 60.203 66.667 0.00 0.00 0.00 3.66
362 363 3.842923 CGAGGCGGTGCTCTCCAT 61.843 66.667 0.00 0.00 0.00 3.41
379 380 4.874977 GAGGCGCGGTCTAGCACC 62.875 72.222 8.83 0.00 42.69 5.01
380 381 4.874977 GGAGGCGCGGTCTAGCAC 62.875 72.222 8.83 0.00 36.85 4.40
382 383 4.273257 GAGGAGGCGCGGTCTAGC 62.273 72.222 8.83 0.00 0.00 3.42
691 692 2.222213 CCACACGTCGCTGTATGAAAAA 59.778 45.455 0.00 0.00 0.00 1.94
692 693 1.795872 CCACACGTCGCTGTATGAAAA 59.204 47.619 0.00 0.00 0.00 2.29
693 694 1.424403 CCACACGTCGCTGTATGAAA 58.576 50.000 0.00 0.00 0.00 2.69
694 695 1.011968 GCCACACGTCGCTGTATGAA 61.012 55.000 0.00 0.00 0.00 2.57
695 696 1.445410 GCCACACGTCGCTGTATGA 60.445 57.895 0.00 0.00 0.00 2.15
696 697 2.788176 CGCCACACGTCGCTGTATG 61.788 63.158 0.00 0.00 36.87 2.39
697 698 2.506217 CGCCACACGTCGCTGTAT 60.506 61.111 0.00 0.00 36.87 2.29
710 711 3.941081 TTTTTCCTTGGCACGCCA 58.059 50.000 6.67 6.67 45.63 5.69
725 726 2.501261 GAAGTGGGCCTACGTCTTTTT 58.499 47.619 24.39 8.29 0.00 1.94
726 727 1.607251 CGAAGTGGGCCTACGTCTTTT 60.607 52.381 27.39 11.45 0.00 2.27
727 728 0.037605 CGAAGTGGGCCTACGTCTTT 60.038 55.000 27.39 11.81 0.00 2.52
728 729 1.590147 CGAAGTGGGCCTACGTCTT 59.410 57.895 27.39 12.16 0.00 3.01
729 730 3.003113 GCGAAGTGGGCCTACGTCT 62.003 63.158 27.39 11.71 0.00 4.18
730 731 2.508663 GCGAAGTGGGCCTACGTC 60.509 66.667 22.39 22.39 0.00 4.34
731 732 3.307906 TGCGAAGTGGGCCTACGT 61.308 61.111 14.26 11.06 0.00 3.57
732 733 2.813908 GTGCGAAGTGGGCCTACG 60.814 66.667 14.26 3.15 0.00 3.51
733 734 2.813908 CGTGCGAAGTGGGCCTAC 60.814 66.667 12.09 12.09 0.00 3.18
734 735 2.992689 TCGTGCGAAGTGGGCCTA 60.993 61.111 4.53 0.00 0.00 3.93
735 736 4.379243 CTCGTGCGAAGTGGGCCT 62.379 66.667 4.53 0.00 0.00 5.19
736 737 4.373116 TCTCGTGCGAAGTGGGCC 62.373 66.667 0.00 0.00 0.00 5.80
737 738 3.112709 GTCTCGTGCGAAGTGGGC 61.113 66.667 0.00 0.00 0.00 5.36
738 739 0.878523 TTTGTCTCGTGCGAAGTGGG 60.879 55.000 0.00 0.00 0.00 4.61
739 740 1.136252 CATTTGTCTCGTGCGAAGTGG 60.136 52.381 0.00 0.00 0.00 4.00
740 741 1.136252 CCATTTGTCTCGTGCGAAGTG 60.136 52.381 0.00 0.00 0.00 3.16
741 742 1.148310 CCATTTGTCTCGTGCGAAGT 58.852 50.000 0.00 0.00 0.00 3.01
742 743 0.443869 CCCATTTGTCTCGTGCGAAG 59.556 55.000 0.00 0.00 0.00 3.79
743 744 1.573829 GCCCATTTGTCTCGTGCGAA 61.574 55.000 0.00 0.00 0.00 4.70
744 745 2.032634 GCCCATTTGTCTCGTGCGA 61.033 57.895 0.00 0.00 0.00 5.10
745 746 2.480555 GCCCATTTGTCTCGTGCG 59.519 61.111 0.00 0.00 0.00 5.34
746 747 2.877691 GGCCCATTTGTCTCGTGC 59.122 61.111 0.00 0.00 0.00 5.34
747 748 2.398554 CCGGCCCATTTGTCTCGTG 61.399 63.158 0.00 0.00 0.00 4.35
748 749 2.046314 CCGGCCCATTTGTCTCGT 60.046 61.111 0.00 0.00 0.00 4.18
749 750 2.824041 CCCGGCCCATTTGTCTCG 60.824 66.667 0.00 0.00 0.00 4.04
750 751 3.140814 GCCCGGCCCATTTGTCTC 61.141 66.667 0.00 0.00 0.00 3.36
751 752 4.759205 GGCCCGGCCCATTTGTCT 62.759 66.667 18.83 0.00 44.06 3.41
762 763 4.864334 GATGACCTGCTGGCCCGG 62.864 72.222 9.95 0.00 36.63 5.73
771 772 3.250323 CTCACGCGCGATGACCTG 61.250 66.667 39.36 23.16 0.00 4.00
783 784 4.803426 GTGGAGGGCTCGCTCACG 62.803 72.222 14.52 0.00 42.01 4.35
784 785 4.459089 GGTGGAGGGCTCGCTCAC 62.459 72.222 14.52 10.54 0.00 3.51
790 791 4.785453 CAAGCGGGTGGAGGGCTC 62.785 72.222 0.00 0.00 35.64 4.70
793 794 2.876368 CTTAGCAAGCGGGTGGAGGG 62.876 65.000 0.00 0.00 0.00 4.30
794 795 1.450312 CTTAGCAAGCGGGTGGAGG 60.450 63.158 0.00 0.00 0.00 4.30
795 796 0.460987 CTCTTAGCAAGCGGGTGGAG 60.461 60.000 0.00 0.00 0.00 3.86
796 797 1.596934 CTCTTAGCAAGCGGGTGGA 59.403 57.895 0.00 0.00 0.00 4.02
797 798 2.109126 GCTCTTAGCAAGCGGGTGG 61.109 63.158 0.00 0.00 41.89 4.61
806 807 2.031069 CCGTTATAGCTCGCTCTTAGCA 60.031 50.000 0.00 0.00 42.58 3.49
829 830 1.900486 GAAGAAGGAGAAGAACGGGGA 59.100 52.381 0.00 0.00 0.00 4.81
1309 1310 1.738099 CCAAGCTTAGCTCGCGTGT 60.738 57.895 7.36 0.00 38.25 4.49
1368 1369 0.623723 TCCATTTGCAGGTACCCTCC 59.376 55.000 8.74 0.00 0.00 4.30
1372 1373 1.692411 GGGATCCATTTGCAGGTACC 58.308 55.000 15.23 2.73 0.00 3.34
1377 1378 2.008268 GCCACGGGATCCATTTGCAG 62.008 60.000 15.23 0.00 0.00 4.41
1391 1392 0.671781 CCTGTCCTTCTTCAGCCACG 60.672 60.000 0.00 0.00 0.00 4.94
1479 1480 1.707427 ACACTGGAGGCCTTCTTGAAT 59.293 47.619 13.68 0.00 0.00 2.57
1481 1482 1.623811 GTACACTGGAGGCCTTCTTGA 59.376 52.381 13.68 0.00 0.00 3.02
1496 1497 2.391389 GGCGCTCCAGCAAGTACAC 61.391 63.158 7.64 0.00 42.21 2.90
1614 1663 3.013921 TGCGGGAAGAACATATGAAACC 58.986 45.455 10.38 5.35 0.00 3.27
1642 1691 6.790336 AACTGAACAAAGATTCGTTTTTCG 57.210 33.333 6.70 4.99 41.41 3.46
1680 1729 3.511934 GCTTGGGATACTCAGATACGGAT 59.488 47.826 0.00 0.00 0.00 4.18
1692 1741 3.444034 GTCAAGGGAAAAGCTTGGGATAC 59.556 47.826 0.00 0.00 0.00 2.24
1798 1847 1.632409 ACATGCTTCATCACCACTCCT 59.368 47.619 0.00 0.00 0.00 3.69
1858 1907 1.068333 CCGACTGCAATCCAAACCAAG 60.068 52.381 0.00 0.00 0.00 3.61
1966 2015 0.540365 ACCAAATCACCAGGGCAGTG 60.540 55.000 0.00 0.00 36.54 3.66
2014 2063 7.716998 ACCATCATGATGTAGGAAATAACTGAC 59.283 37.037 29.23 0.00 37.11 3.51
2154 2203 4.214758 CGATCCTGCAGCATTCATATGAAA 59.785 41.667 21.50 6.19 37.61 2.69
2275 2324 9.847224 AAGTAGTTTAAGGACTGATTTCTTTCA 57.153 29.630 0.00 0.00 0.00 2.69
2298 2347 5.986501 TGTTCACAACAAAAGGGTAAAGT 57.013 34.783 0.00 0.00 38.72 2.66
2404 2453 9.201989 TCTTCACCACTATACATACTCAAGATT 57.798 33.333 0.00 0.00 0.00 2.40
2418 2467 8.196378 ACTCTACTCTTTTTCTTCACCACTAT 57.804 34.615 0.00 0.00 0.00 2.12
2423 2472 9.490379 TCATAAACTCTACTCTTTTTCTTCACC 57.510 33.333 0.00 0.00 0.00 4.02
2528 2577 0.101219 GCAAGGTGAATCGATTGGGC 59.899 55.000 16.96 1.51 0.00 5.36
2557 2606 2.177394 TTCACGATGCTTGCTTGGTA 57.823 45.000 0.00 0.00 0.00 3.25
2571 2620 3.455619 GTGCTTCACCAAGTATTCACG 57.544 47.619 0.00 0.00 31.45 4.35
2592 2641 8.172484 CCAATTCAATAATCACACAAAATGCTG 58.828 33.333 0.00 0.00 0.00 4.41
2660 3023 8.935844 CAATAATCAATCCGAAATTCTCCGATA 58.064 33.333 0.00 0.00 0.00 2.92
2661 3024 7.661437 TCAATAATCAATCCGAAATTCTCCGAT 59.339 33.333 0.00 0.00 0.00 4.18
2662 3025 6.989759 TCAATAATCAATCCGAAATTCTCCGA 59.010 34.615 0.00 0.00 0.00 4.55
2663 3026 7.189693 TCAATAATCAATCCGAAATTCTCCG 57.810 36.000 0.00 0.00 0.00 4.63
2664 3027 8.571336 ACATCAATAATCAATCCGAAATTCTCC 58.429 33.333 0.00 0.00 0.00 3.71
2665 3028 9.604626 GACATCAATAATCAATCCGAAATTCTC 57.395 33.333 0.00 0.00 0.00 2.87
2666 3029 9.123902 TGACATCAATAATCAATCCGAAATTCT 57.876 29.630 0.00 0.00 0.00 2.40
2667 3030 9.390795 CTGACATCAATAATCAATCCGAAATTC 57.609 33.333 0.00 0.00 0.00 2.17
2668 3031 7.864379 GCTGACATCAATAATCAATCCGAAATT 59.136 33.333 0.00 0.00 0.00 1.82
2669 3032 7.230108 AGCTGACATCAATAATCAATCCGAAAT 59.770 33.333 0.00 0.00 0.00 2.17
2670 3033 6.543465 AGCTGACATCAATAATCAATCCGAAA 59.457 34.615 0.00 0.00 0.00 3.46
2671 3034 6.057533 AGCTGACATCAATAATCAATCCGAA 58.942 36.000 0.00 0.00 0.00 4.30
2672 3035 5.614308 AGCTGACATCAATAATCAATCCGA 58.386 37.500 0.00 0.00 0.00 4.55
2673 3036 5.699915 AGAGCTGACATCAATAATCAATCCG 59.300 40.000 0.00 0.00 0.00 4.18
2674 3037 7.228108 TGAAGAGCTGACATCAATAATCAATCC 59.772 37.037 0.00 0.00 0.00 3.01
2675 3038 8.151141 TGAAGAGCTGACATCAATAATCAATC 57.849 34.615 0.00 0.00 0.00 2.67
2676 3039 8.515695 TTGAAGAGCTGACATCAATAATCAAT 57.484 30.769 0.00 0.00 0.00 2.57
2677 3040 7.926674 TTGAAGAGCTGACATCAATAATCAA 57.073 32.000 0.00 0.00 0.00 2.57
2678 3041 7.926674 TTTGAAGAGCTGACATCAATAATCA 57.073 32.000 0.00 0.00 32.35 2.57
2679 3042 8.404000 ACATTTGAAGAGCTGACATCAATAATC 58.596 33.333 0.00 0.00 32.35 1.75
2680 3043 8.289939 ACATTTGAAGAGCTGACATCAATAAT 57.710 30.769 0.00 0.00 32.35 1.28
2681 3044 7.692460 ACATTTGAAGAGCTGACATCAATAA 57.308 32.000 0.00 0.00 32.35 1.40
2682 3045 7.362315 CCAACATTTGAAGAGCTGACATCAATA 60.362 37.037 0.00 0.00 32.35 1.90
2683 3046 6.387465 CAACATTTGAAGAGCTGACATCAAT 58.613 36.000 0.00 0.00 32.35 2.57
2684 3047 5.278610 CCAACATTTGAAGAGCTGACATCAA 60.279 40.000 0.00 0.00 0.00 2.57
2685 3048 4.216902 CCAACATTTGAAGAGCTGACATCA 59.783 41.667 0.00 0.00 0.00 3.07
2686 3049 4.380233 CCCAACATTTGAAGAGCTGACATC 60.380 45.833 0.00 0.00 0.00 3.06
2687 3050 3.508793 CCCAACATTTGAAGAGCTGACAT 59.491 43.478 0.00 0.00 0.00 3.06
2688 3051 2.886523 CCCAACATTTGAAGAGCTGACA 59.113 45.455 0.00 0.00 0.00 3.58
2689 3052 2.887152 ACCCAACATTTGAAGAGCTGAC 59.113 45.455 0.00 0.00 0.00 3.51
2690 3053 3.149196 GACCCAACATTTGAAGAGCTGA 58.851 45.455 0.00 0.00 0.00 4.26
2691 3054 2.886523 TGACCCAACATTTGAAGAGCTG 59.113 45.455 0.00 0.00 0.00 4.24
2692 3055 3.228188 TGACCCAACATTTGAAGAGCT 57.772 42.857 0.00 0.00 0.00 4.09
2693 3056 3.119352 GGATGACCCAACATTTGAAGAGC 60.119 47.826 0.00 0.00 34.14 4.09
2694 3057 4.081406 TGGATGACCCAACATTTGAAGAG 58.919 43.478 0.00 0.00 43.29 2.85
2695 3058 4.111255 TGGATGACCCAACATTTGAAGA 57.889 40.909 0.00 0.00 43.29 2.87
2706 3069 2.079170 TTGCTTGTTTGGATGACCCA 57.921 45.000 0.00 0.00 44.93 4.51
2707 3070 2.299867 ACATTGCTTGTTTGGATGACCC 59.700 45.455 0.00 0.00 33.74 4.46
2708 3071 3.005684 TCACATTGCTTGTTTGGATGACC 59.994 43.478 0.00 0.00 36.00 4.02
2709 3072 4.241590 TCACATTGCTTGTTTGGATGAC 57.758 40.909 0.00 0.00 36.00 3.06
2710 3073 6.406065 CCATATCACATTGCTTGTTTGGATGA 60.406 38.462 0.00 0.00 36.00 2.92
2711 3074 5.751509 CCATATCACATTGCTTGTTTGGATG 59.248 40.000 0.00 0.00 36.00 3.51
2712 3075 5.657745 TCCATATCACATTGCTTGTTTGGAT 59.342 36.000 0.00 0.00 36.00 3.41
2713 3076 5.015515 TCCATATCACATTGCTTGTTTGGA 58.984 37.500 0.00 0.00 36.00 3.53
2714 3077 5.104374 GTCCATATCACATTGCTTGTTTGG 58.896 41.667 0.00 0.00 36.00 3.28
2715 3078 5.803461 CAGTCCATATCACATTGCTTGTTTG 59.197 40.000 0.00 0.00 36.00 2.93
2716 3079 5.622914 GCAGTCCATATCACATTGCTTGTTT 60.623 40.000 0.00 0.00 36.00 2.83
2717 3080 4.142315 GCAGTCCATATCACATTGCTTGTT 60.142 41.667 0.00 0.00 36.00 2.83
2718 3081 3.379372 GCAGTCCATATCACATTGCTTGT 59.621 43.478 0.00 0.00 39.91 3.16
2719 3082 3.379057 TGCAGTCCATATCACATTGCTTG 59.621 43.478 0.00 0.00 0.00 4.01
2720 3083 3.379372 GTGCAGTCCATATCACATTGCTT 59.621 43.478 0.00 0.00 0.00 3.91
2721 3084 2.947652 GTGCAGTCCATATCACATTGCT 59.052 45.455 0.00 0.00 0.00 3.91
2722 3085 2.684374 TGTGCAGTCCATATCACATTGC 59.316 45.455 0.00 0.00 34.87 3.56
2723 3086 3.943381 AGTGTGCAGTCCATATCACATTG 59.057 43.478 0.00 0.00 40.88 2.82
2724 3087 4.226427 AGTGTGCAGTCCATATCACATT 57.774 40.909 0.00 0.00 40.88 2.71
2725 3088 3.920231 AGTGTGCAGTCCATATCACAT 57.080 42.857 0.00 0.00 40.88 3.21
2726 3089 3.118775 GGTAGTGTGCAGTCCATATCACA 60.119 47.826 0.00 0.00 37.14 3.58
2727 3090 3.118775 TGGTAGTGTGCAGTCCATATCAC 60.119 47.826 0.00 0.00 0.00 3.06
2728 3091 3.103742 TGGTAGTGTGCAGTCCATATCA 58.896 45.455 0.00 0.00 0.00 2.15
2729 3092 3.819564 TGGTAGTGTGCAGTCCATATC 57.180 47.619 0.00 0.00 0.00 1.63
2730 3093 3.711190 TGATGGTAGTGTGCAGTCCATAT 59.289 43.478 7.65 0.00 38.74 1.78
2731 3094 3.103742 TGATGGTAGTGTGCAGTCCATA 58.896 45.455 7.65 0.00 38.74 2.74
2732 3095 1.908619 TGATGGTAGTGTGCAGTCCAT 59.091 47.619 7.46 7.46 40.92 3.41
2733 3096 1.347062 TGATGGTAGTGTGCAGTCCA 58.653 50.000 0.00 0.00 0.00 4.02
2734 3097 2.698855 ATGATGGTAGTGTGCAGTCC 57.301 50.000 0.00 0.00 0.00 3.85
2735 3098 4.726416 CAAAATGATGGTAGTGTGCAGTC 58.274 43.478 0.00 0.00 0.00 3.51
2736 3099 3.057315 GCAAAATGATGGTAGTGTGCAGT 60.057 43.478 0.00 0.00 0.00 4.40
2737 3100 3.057386 TGCAAAATGATGGTAGTGTGCAG 60.057 43.478 0.00 0.00 35.93 4.41
2738 3101 2.889678 TGCAAAATGATGGTAGTGTGCA 59.110 40.909 0.00 0.00 38.35 4.57
2739 3102 3.574284 TGCAAAATGATGGTAGTGTGC 57.426 42.857 0.00 0.00 0.00 4.57
2740 3103 6.645827 TCAAATTGCAAAATGATGGTAGTGTG 59.354 34.615 1.71 0.00 0.00 3.82
2741 3104 6.646240 GTCAAATTGCAAAATGATGGTAGTGT 59.354 34.615 17.33 0.00 30.17 3.55
2742 3105 6.869913 AGTCAAATTGCAAAATGATGGTAGTG 59.130 34.615 17.33 0.00 30.17 2.74
2743 3106 6.869913 CAGTCAAATTGCAAAATGATGGTAGT 59.130 34.615 17.33 0.00 30.17 2.73
2744 3107 7.062605 GTCAGTCAAATTGCAAAATGATGGTAG 59.937 37.037 17.33 8.64 30.17 3.18
2745 3108 6.867816 GTCAGTCAAATTGCAAAATGATGGTA 59.132 34.615 17.33 5.07 30.17 3.25
2746 3109 5.697633 GTCAGTCAAATTGCAAAATGATGGT 59.302 36.000 17.33 6.28 30.17 3.55
2747 3110 5.929992 AGTCAGTCAAATTGCAAAATGATGG 59.070 36.000 17.33 13.29 30.17 3.51
2748 3111 6.866770 AGAGTCAGTCAAATTGCAAAATGATG 59.133 34.615 17.33 15.51 30.17 3.07
2749 3112 6.989659 AGAGTCAGTCAAATTGCAAAATGAT 58.010 32.000 17.33 4.73 30.17 2.45
2750 3113 6.395426 AGAGTCAGTCAAATTGCAAAATGA 57.605 33.333 1.71 8.39 0.00 2.57
2751 3114 9.282247 GTATAGAGTCAGTCAAATTGCAAAATG 57.718 33.333 1.71 5.82 0.00 2.32
2752 3115 8.177663 CGTATAGAGTCAGTCAAATTGCAAAAT 58.822 33.333 1.71 0.00 0.00 1.82
2753 3116 7.172532 ACGTATAGAGTCAGTCAAATTGCAAAA 59.827 33.333 1.71 0.00 0.00 2.44
2754 3117 6.649141 ACGTATAGAGTCAGTCAAATTGCAAA 59.351 34.615 1.71 0.00 0.00 3.68
2755 3118 6.163476 ACGTATAGAGTCAGTCAAATTGCAA 58.837 36.000 0.00 0.00 0.00 4.08
2756 3119 5.720202 ACGTATAGAGTCAGTCAAATTGCA 58.280 37.500 0.00 0.00 0.00 4.08
2757 3120 6.648725 AACGTATAGAGTCAGTCAAATTGC 57.351 37.500 0.00 0.00 0.00 3.56
2772 3135 6.504398 TCCACAAGCTCTATGAAACGTATAG 58.496 40.000 0.00 0.00 0.00 1.31
2777 3140 4.393062 ACATTCCACAAGCTCTATGAAACG 59.607 41.667 0.00 0.00 0.00 3.60
2838 3201 7.797819 ACGATTCAGAAAATAAGACTGACAAC 58.202 34.615 0.00 0.00 39.80 3.32
2839 3202 7.962964 ACGATTCAGAAAATAAGACTGACAA 57.037 32.000 0.00 0.00 39.80 3.18
2855 3218 5.784750 TCTGCAAGTCATAAACGATTCAG 57.215 39.130 0.00 0.00 33.76 3.02
2859 3222 8.554528 CATCTAAATCTGCAAGTCATAAACGAT 58.445 33.333 0.00 0.00 33.76 3.73
2898 3261 9.398170 ACAGAATCATAACACAAAGATTTTTCG 57.602 29.630 0.00 0.00 31.35 3.46
2912 3277 9.098355 TGCAGTTAGTTCATACAGAATCATAAC 57.902 33.333 0.00 0.00 38.76 1.89
2926 3291 3.871006 CGCCATTATCTGCAGTTAGTTCA 59.129 43.478 14.67 0.00 0.00 3.18
2937 3304 0.809636 TGTCACGGCGCCATTATCTG 60.810 55.000 28.98 10.77 0.00 2.90
2947 3314 1.086696 ATTCAGGAAATGTCACGGCG 58.913 50.000 4.80 4.80 0.00 6.46
2960 3327 6.094048 CCATGTAACCAGAAGTAACATTCAGG 59.906 42.308 0.00 0.00 40.63 3.86
2986 3353 4.848357 AGGTATCAGGAACCAAGAACATG 58.152 43.478 0.00 0.00 39.64 3.21
2987 3354 5.520748 AAGGTATCAGGAACCAAGAACAT 57.479 39.130 0.00 0.00 39.64 2.71
3029 3397 9.865321 CCAAGATGATTTTCACTGAAATAACAT 57.135 29.630 5.03 10.37 31.34 2.71
3030 3398 8.859090 ACCAAGATGATTTTCACTGAAATAACA 58.141 29.630 5.03 6.64 31.34 2.41
3031 3399 9.696917 AACCAAGATGATTTTCACTGAAATAAC 57.303 29.630 5.03 1.75 31.34 1.89
3033 3401 9.912634 GAAACCAAGATGATTTTCACTGAAATA 57.087 29.630 5.03 0.00 31.34 1.40
3034 3402 8.423349 TGAAACCAAGATGATTTTCACTGAAAT 58.577 29.630 5.03 0.00 33.96 2.17
3035 3403 7.780064 TGAAACCAAGATGATTTTCACTGAAA 58.220 30.769 0.00 0.00 33.96 2.69
3036 3404 7.345422 TGAAACCAAGATGATTTTCACTGAA 57.655 32.000 0.00 0.00 33.96 3.02
3037 3405 6.957920 TGAAACCAAGATGATTTTCACTGA 57.042 33.333 0.00 0.00 33.96 3.41
3038 3406 8.492748 CAAATGAAACCAAGATGATTTTCACTG 58.507 33.333 8.38 6.60 39.96 3.66
3039 3407 8.206189 ACAAATGAAACCAAGATGATTTTCACT 58.794 29.630 8.38 0.00 39.96 3.41
3040 3408 8.277713 CACAAATGAAACCAAGATGATTTTCAC 58.722 33.333 8.38 0.00 39.96 3.18
3041 3409 8.202811 TCACAAATGAAACCAAGATGATTTTCA 58.797 29.630 8.55 8.55 41.06 2.69
3042 3410 8.490355 GTCACAAATGAAACCAAGATGATTTTC 58.510 33.333 0.00 0.00 36.31 2.29
3043 3411 8.206189 AGTCACAAATGAAACCAAGATGATTTT 58.794 29.630 0.00 0.00 36.31 1.82
3044 3412 7.729116 AGTCACAAATGAAACCAAGATGATTT 58.271 30.769 0.00 0.00 36.31 2.17
3045 3413 7.294017 AGTCACAAATGAAACCAAGATGATT 57.706 32.000 0.00 0.00 36.31 2.57
3046 3414 6.906157 AGTCACAAATGAAACCAAGATGAT 57.094 33.333 0.00 0.00 36.31 2.45
3047 3415 6.506147 CAAGTCACAAATGAAACCAAGATGA 58.494 36.000 0.00 0.00 36.31 2.92
3048 3416 5.176223 GCAAGTCACAAATGAAACCAAGATG 59.824 40.000 0.00 0.00 36.31 2.90
3049 3417 5.163426 TGCAAGTCACAAATGAAACCAAGAT 60.163 36.000 0.00 0.00 36.31 2.40
3050 3418 4.159321 TGCAAGTCACAAATGAAACCAAGA 59.841 37.500 0.00 0.00 36.31 3.02
3051 3419 4.431809 TGCAAGTCACAAATGAAACCAAG 58.568 39.130 0.00 0.00 36.31 3.61
3052 3420 4.431809 CTGCAAGTCACAAATGAAACCAA 58.568 39.130 0.00 0.00 36.31 3.67
3053 3421 4.044336 CTGCAAGTCACAAATGAAACCA 57.956 40.909 0.00 0.00 36.31 3.67
3068 3436 7.259290 ACCGAAACCAATATATAACTGCAAG 57.741 36.000 0.00 0.00 42.29 4.01
3069 3437 6.261381 GGACCGAAACCAATATATAACTGCAA 59.739 38.462 0.00 0.00 0.00 4.08
3070 3438 5.761234 GGACCGAAACCAATATATAACTGCA 59.239 40.000 0.00 0.00 0.00 4.41
3071 3439 5.107220 CGGACCGAAACCAATATATAACTGC 60.107 44.000 8.64 0.00 0.00 4.40
3072 3440 6.145048 GTCGGACCGAAACCAATATATAACTG 59.855 42.308 20.26 0.00 37.72 3.16
3073 3441 6.183360 TGTCGGACCGAAACCAATATATAACT 60.183 38.462 20.26 0.00 37.72 2.24
3074 3442 5.984926 TGTCGGACCGAAACCAATATATAAC 59.015 40.000 20.26 1.67 37.72 1.89
3075 3443 6.159299 TGTCGGACCGAAACCAATATATAA 57.841 37.500 20.26 0.00 37.72 0.98
3076 3444 5.787953 TGTCGGACCGAAACCAATATATA 57.212 39.130 20.26 0.00 37.72 0.86
3077 3445 4.675976 TGTCGGACCGAAACCAATATAT 57.324 40.909 20.26 0.00 37.72 0.86
3078 3446 4.183101 GTTGTCGGACCGAAACCAATATA 58.817 43.478 20.26 0.00 37.72 0.86
3079 3447 3.004862 GTTGTCGGACCGAAACCAATAT 58.995 45.455 20.26 0.00 37.72 1.28
3080 3448 2.224233 TGTTGTCGGACCGAAACCAATA 60.224 45.455 20.26 13.99 37.72 1.90
3081 3449 1.232119 GTTGTCGGACCGAAACCAAT 58.768 50.000 20.26 0.00 37.72 3.16
3082 3450 0.107800 TGTTGTCGGACCGAAACCAA 60.108 50.000 20.26 15.87 37.72 3.67
3083 3451 0.107800 TTGTTGTCGGACCGAAACCA 60.108 50.000 20.26 9.63 37.72 3.67
3084 3452 0.305617 GTTGTTGTCGGACCGAAACC 59.694 55.000 20.26 6.37 37.72 3.27
3085 3453 1.008329 TGTTGTTGTCGGACCGAAAC 58.992 50.000 20.26 22.44 37.72 2.78
3086 3454 1.956297 ATGTTGTTGTCGGACCGAAA 58.044 45.000 20.26 11.31 37.72 3.46
3087 3455 1.956297 AATGTTGTTGTCGGACCGAA 58.044 45.000 20.26 6.41 37.72 4.30
3088 3456 1.956297 AAATGTTGTTGTCGGACCGA 58.044 45.000 13.88 13.88 0.00 4.69
3089 3457 2.766970 AAAATGTTGTTGTCGGACCG 57.233 45.000 7.84 7.84 0.00 4.79
3107 3475 9.438228 TCATTTGTACGTAATCATAGACCAAAA 57.562 29.630 0.00 0.00 0.00 2.44
3108 3476 9.438228 TTCATTTGTACGTAATCATAGACCAAA 57.562 29.630 0.00 0.71 0.00 3.28
3109 3477 9.438228 TTTCATTTGTACGTAATCATAGACCAA 57.562 29.630 0.00 0.00 0.00 3.67
3110 3478 9.607988 ATTTCATTTGTACGTAATCATAGACCA 57.392 29.630 0.00 0.00 0.00 4.02
3156 3524 2.019249 CTGAAGCACACCCATACCATG 58.981 52.381 0.00 0.00 0.00 3.66
3157 3525 1.683011 GCTGAAGCACACCCATACCAT 60.683 52.381 0.00 0.00 41.59 3.55
3158 3526 0.322456 GCTGAAGCACACCCATACCA 60.322 55.000 0.00 0.00 41.59 3.25
3159 3527 0.035056 AGCTGAAGCACACCCATACC 60.035 55.000 4.90 0.00 45.16 2.73
3160 3528 1.826385 AAGCTGAAGCACACCCATAC 58.174 50.000 4.90 0.00 45.16 2.39
3161 3529 2.584835 AAAGCTGAAGCACACCCATA 57.415 45.000 4.90 0.00 45.16 2.74
3162 3530 1.708341 AAAAGCTGAAGCACACCCAT 58.292 45.000 4.90 0.00 45.16 4.00
3163 3531 1.484038 AAAAAGCTGAAGCACACCCA 58.516 45.000 4.90 0.00 45.16 4.51
3164 3532 3.726291 TTAAAAAGCTGAAGCACACCC 57.274 42.857 4.90 0.00 45.16 4.61
3165 3533 4.429108 TGTTTAAAAAGCTGAAGCACACC 58.571 39.130 4.90 0.00 45.16 4.16
3166 3534 6.476706 AGAATGTTTAAAAAGCTGAAGCACAC 59.523 34.615 4.90 0.00 45.16 3.82
3167 3535 6.572519 AGAATGTTTAAAAAGCTGAAGCACA 58.427 32.000 4.90 0.00 45.16 4.57
3168 3536 7.339953 CAAGAATGTTTAAAAAGCTGAAGCAC 58.660 34.615 4.90 0.00 45.16 4.40
3169 3537 6.018832 GCAAGAATGTTTAAAAAGCTGAAGCA 60.019 34.615 4.90 0.00 45.16 3.91
3170 3538 6.201615 AGCAAGAATGTTTAAAAAGCTGAAGC 59.798 34.615 0.00 0.00 42.49 3.86
3171 3539 7.704789 AGCAAGAATGTTTAAAAAGCTGAAG 57.295 32.000 0.00 0.00 0.00 3.02
3172 3540 7.698836 GAGCAAGAATGTTTAAAAAGCTGAA 57.301 32.000 0.00 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.