Multiple sequence alignment - TraesCS3D01G437100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G437100 chr3D 100.000 8129 0 0 1 8129 548570316 548562188 0.000000e+00 15012.0
1 TraesCS3D01G437100 chr3D 86.681 931 99 18 5828 6752 548545516 548544605 0.000000e+00 1009.0
2 TraesCS3D01G437100 chr3D 80.372 1345 226 20 965 2289 548551084 548549758 0.000000e+00 987.0
3 TraesCS3D01G437100 chr3D 84.900 1000 109 17 3785 4751 548547351 548546361 0.000000e+00 972.0
4 TraesCS3D01G437100 chr3D 84.236 628 79 12 5176 5800 548546126 548545516 1.950000e-165 593.0
5 TraesCS3D01G437100 chr3D 83.860 570 72 5 6834 7383 548544533 548543964 7.230000e-145 525.0
6 TraesCS3D01G437100 chr3D 85.331 484 39 19 7529 8001 548541488 548541026 9.550000e-129 472.0
7 TraesCS3D01G437100 chr3D 78.772 391 74 7 3410 3791 548548259 548547869 3.770000e-63 254.0
8 TraesCS3D01G437100 chr3D 86.093 151 7 8 7409 7546 548543799 548543650 5.080000e-32 150.0
9 TraesCS3D01G437100 chr3D 96.875 32 1 0 84 115 328587108 328587077 4.000000e-03 54.7
10 TraesCS3D01G437100 chr3B 90.788 3365 213 48 956 4265 727244281 727240959 0.000000e+00 4407.0
11 TraesCS3D01G437100 chr3B 91.079 1715 98 15 5176 6886 727318267 727316604 0.000000e+00 2268.0
12 TraesCS3D01G437100 chr3B 90.152 1716 101 14 5176 6886 727240336 727238684 0.000000e+00 2170.0
13 TraesCS3D01G437100 chr3B 83.801 2315 256 60 5852 8083 726771782 726769504 0.000000e+00 2087.0
14 TraesCS3D01G437100 chr3B 93.291 1431 64 12 785 2200 727323491 727322078 0.000000e+00 2082.0
15 TraesCS3D01G437100 chr3B 93.454 1161 49 16 3117 4265 727320035 727318890 0.000000e+00 1698.0
16 TraesCS3D01G437100 chr3B 88.759 943 65 24 2202 3119 727322007 727321081 0.000000e+00 1116.0
17 TraesCS3D01G437100 chr3B 87.059 935 100 16 5828 6752 727141908 727140985 0.000000e+00 1037.0
18 TraesCS3D01G437100 chr3B 80.537 1341 226 21 965 2286 727152732 727151408 0.000000e+00 998.0
19 TraesCS3D01G437100 chr3B 84.646 990 116 22 3785 4751 727143725 727142749 0.000000e+00 953.0
20 TraesCS3D01G437100 chr3B 91.745 642 36 13 7447 8083 727140011 727139382 0.000000e+00 876.0
21 TraesCS3D01G437100 chr3B 89.323 665 50 6 1 663 727325111 727324466 0.000000e+00 815.0
22 TraesCS3D01G437100 chr3B 94.655 449 22 2 4303 4751 727318896 727318450 0.000000e+00 695.0
23 TraesCS3D01G437100 chr3B 94.820 444 22 1 4308 4751 727240961 727240519 0.000000e+00 691.0
24 TraesCS3D01G437100 chr3B 84.530 627 77 12 5176 5800 727142516 727141908 3.250000e-168 603.0
25 TraesCS3D01G437100 chr3B 86.285 576 40 11 7527 8088 727238200 727237650 2.530000e-164 590.0
26 TraesCS3D01G437100 chr3B 84.843 508 38 15 7527 8020 727316120 727315638 7.380000e-130 475.0
27 TraesCS3D01G437100 chr3B 84.382 461 49 5 6984 7426 727140868 727140413 1.620000e-116 431.0
28 TraesCS3D01G437100 chr3B 86.269 386 49 1 5388 5773 726772268 726771887 4.540000e-112 416.0
29 TraesCS3D01G437100 chr3B 75.548 912 178 33 1195 2080 726778834 726777942 2.730000e-109 407.0
30 TraesCS3D01G437100 chr3B 92.268 194 12 2 4814 5005 727318452 727318260 1.040000e-68 272.0
31 TraesCS3D01G437100 chr3B 91.753 194 13 2 4814 5005 727240521 727240329 4.840000e-67 267.0
32 TraesCS3D01G437100 chr3B 94.845 97 4 1 693 788 727323662 727323566 5.080000e-32 150.0
33 TraesCS3D01G437100 chr3B 93.506 77 5 0 4638 4714 726483724 726483648 1.850000e-21 115.0
34 TraesCS3D01G437100 chr3B 97.561 41 0 1 8089 8129 460388184 460388145 1.460000e-07 69.4
35 TraesCS3D01G437100 chr3B 97.500 40 0 1 8090 8129 727946381 727946343 5.270000e-07 67.6
36 TraesCS3D01G437100 chr3A 92.864 2242 97 20 5176 7397 686137830 686135632 0.000000e+00 3195.0
37 TraesCS3D01G437100 chr3A 91.667 1848 118 24 2921 4751 686139838 686138010 0.000000e+00 2527.0
38 TraesCS3D01G437100 chr3A 94.819 1409 45 9 785 2173 686142387 686140987 0.000000e+00 2172.0
39 TraesCS3D01G437100 chr3A 82.302 582 60 17 2350 2903 686140711 686140145 1.600000e-126 464.0
40 TraesCS3D01G437100 chr3A 83.579 475 54 15 7530 8000 686135613 686135159 2.710000e-114 424.0
41 TraesCS3D01G437100 chr3A 92.565 269 13 2 354 616 686148137 686147870 5.950000e-101 379.0
42 TraesCS3D01G437100 chr3A 88.254 315 18 8 3 317 686148644 686148349 7.760000e-95 359.0
43 TraesCS3D01G437100 chr3A 94.944 178 8 1 612 788 686142639 686142462 2.230000e-70 278.0
44 TraesCS3D01G437100 chr3A 93.714 175 9 2 5006 5179 37342029 37342202 2.250000e-65 261.0
45 TraesCS3D01G437100 chr3A 91.146 192 15 1 4814 5005 686138012 686137823 8.090000e-65 259.0
46 TraesCS3D01G437100 chr3A 94.083 169 9 1 5006 5173 76547392 76547224 1.050000e-63 255.0
47 TraesCS3D01G437100 chr3A 86.466 133 8 6 7951 8083 686135254 686135132 3.960000e-28 137.0
48 TraesCS3D01G437100 chr3A 87.755 49 6 0 4767 4815 725469400 725469352 3.170000e-04 58.4
49 TraesCS3D01G437100 chrUn 90.947 1436 80 9 5335 6768 404837132 404835745 0.000000e+00 1886.0
50 TraesCS3D01G437100 chr7D 83.350 1982 206 59 5176 7104 247748421 247746511 0.000000e+00 1718.0
51 TraesCS3D01G437100 chr7D 95.954 173 5 2 5007 5178 628674512 628674683 6.210000e-71 279.0
52 TraesCS3D01G437100 chr7D 93.642 173 9 2 5006 5177 518927984 518927813 2.910000e-64 257.0
53 TraesCS3D01G437100 chr7A 94.220 173 9 1 5005 5176 721066862 721067034 6.260000e-66 263.0
54 TraesCS3D01G437100 chr7A 97.500 40 0 1 8090 8129 47680877 47680915 5.270000e-07 67.6
55 TraesCS3D01G437100 chr6A 93.750 176 10 1 5006 5180 234145199 234145024 6.260000e-66 263.0
56 TraesCS3D01G437100 chr6A 93.103 174 10 2 5006 5178 6186514 6186342 3.770000e-63 254.0
57 TraesCS3D01G437100 chr6A 95.238 42 2 0 8088 8129 3341520 3341561 5.270000e-07 67.6
58 TraesCS3D01G437100 chr6A 100.000 33 0 0 4765 4797 92848713 92848745 2.450000e-05 62.1
59 TraesCS3D01G437100 chr6D 93.678 174 10 1 5006 5178 4031469 4031296 8.090000e-65 259.0
60 TraesCS3D01G437100 chr6D 77.586 174 34 4 1261 1430 17287237 17287065 5.190000e-17 100.0
61 TraesCS3D01G437100 chr6D 95.122 41 1 1 8089 8129 22061725 22061764 6.810000e-06 63.9
62 TraesCS3D01G437100 chr6D 100.000 30 0 0 4765 4794 152756480 152756509 1.000000e-03 56.5
63 TraesCS3D01G437100 chr6D 100.000 30 0 0 4765 4794 198952515 198952486 1.000000e-03 56.5
64 TraesCS3D01G437100 chr6D 100.000 30 0 0 4765 4794 199117254 199117225 1.000000e-03 56.5
65 TraesCS3D01G437100 chr2D 92.655 177 12 1 5000 5175 7651364 7651188 3.770000e-63 254.0
66 TraesCS3D01G437100 chr2D 87.719 57 3 2 4760 4815 181300090 181300143 6.810000e-06 63.9
67 TraesCS3D01G437100 chr5D 78.109 201 35 6 84 276 327532059 327532258 1.430000e-22 119.0
68 TraesCS3D01G437100 chr5D 82.143 84 9 6 2796 2877 45371421 45371500 5.270000e-07 67.6
69 TraesCS3D01G437100 chr4D 76.293 232 49 6 83 312 49909169 49908942 1.430000e-22 119.0
70 TraesCS3D01G437100 chr4D 90.000 50 5 0 88 137 66643079 66643030 1.890000e-06 65.8
71 TraesCS3D01G437100 chr4D 100.000 30 0 0 4765 4794 153023179 153023150 1.000000e-03 56.5
72 TraesCS3D01G437100 chr4D 100.000 30 0 0 4765 4794 246193652 246193681 1.000000e-03 56.5
73 TraesCS3D01G437100 chr1B 75.377 199 37 9 83 276 138559994 138560185 1.450000e-12 86.1
74 TraesCS3D01G437100 chr4B 97.619 42 1 0 8088 8129 438222979 438222938 1.130000e-08 73.1
75 TraesCS3D01G437100 chr4B 89.796 49 1 3 4749 4794 96641841 96641888 8.810000e-05 60.2
76 TraesCS3D01G437100 chr2B 97.561 41 1 0 8089 8129 771812883 771812923 4.070000e-08 71.3
77 TraesCS3D01G437100 chr7B 97.561 41 0 1 8089 8129 727844433 727844472 1.460000e-07 69.4
78 TraesCS3D01G437100 chr2A 97.500 40 1 0 8090 8129 778752666 778752627 1.460000e-07 69.4
79 TraesCS3D01G437100 chr2A 88.679 53 1 5 5150 5199 768692849 768692799 8.810000e-05 60.2
80 TraesCS3D01G437100 chr5A 82.143 84 9 6 2796 2877 36323155 36323234 5.270000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G437100 chr3D 548562188 548570316 8128 True 15012.000000 15012 100.000000 1 8129 1 chr3D.!!$R2 8128
1 TraesCS3D01G437100 chr3D 548541026 548551084 10058 True 620.250000 1009 83.780625 965 8001 8 chr3D.!!$R3 7036
2 TraesCS3D01G437100 chr3B 727237650 727244281 6631 True 1625.000000 4407 90.759600 956 8088 5 chr3B.!!$R8 7132
3 TraesCS3D01G437100 chr3B 726769504 726772268 2764 True 1251.500000 2087 85.035000 5388 8083 2 chr3B.!!$R6 2695
4 TraesCS3D01G437100 chr3B 727315638 727325111 9473 True 1063.444444 2268 91.390778 1 8020 9 chr3B.!!$R9 8019
5 TraesCS3D01G437100 chr3B 727151408 727152732 1324 True 998.000000 998 80.537000 965 2286 1 chr3B.!!$R4 1321
6 TraesCS3D01G437100 chr3B 727139382 727143725 4343 True 780.000000 1037 86.472400 3785 8083 5 chr3B.!!$R7 4298
7 TraesCS3D01G437100 chr3B 726777942 726778834 892 True 407.000000 407 75.548000 1195 2080 1 chr3B.!!$R3 885
8 TraesCS3D01G437100 chr3A 686135132 686142639 7507 True 1182.000000 3195 89.723375 612 8083 8 chr3A.!!$R3 7471
9 TraesCS3D01G437100 chr3A 686147870 686148644 774 True 369.000000 379 90.409500 3 616 2 chr3A.!!$R4 613
10 TraesCS3D01G437100 chrUn 404835745 404837132 1387 True 1886.000000 1886 90.947000 5335 6768 1 chrUn.!!$R1 1433
11 TraesCS3D01G437100 chr7D 247746511 247748421 1910 True 1718.000000 1718 83.350000 5176 7104 1 chr7D.!!$R1 1928

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
890 1940 0.037232 AAGAGCAAGCACCGACCTAC 60.037 55.000 0.00 0.00 0.00 3.18 F
1095 2145 1.018226 CGCTGCCACTCCTTGAAGAG 61.018 60.000 0.00 0.00 39.91 2.85 F
2327 3575 1.378762 GGCAAACCACAGGCTCCTA 59.621 57.895 0.00 0.00 35.26 2.94 F
4144 8223 0.037160 TGCAGTGCATGAGGTGATGT 59.963 50.000 15.37 0.00 31.71 3.06 F
5038 9208 0.517316 GCGGCCTATGGAAAATAGCG 59.483 55.000 0.00 0.00 0.00 4.26 F
5804 9997 0.102663 TTGTTGGCATGTGCACTGTG 59.897 50.000 19.41 17.16 44.36 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2327 3575 2.191375 CCATGGCTGAGATGCGGT 59.809 61.111 0.00 0.0 0.00 5.68 R
2912 4539 0.946221 GTATTGGAGCTCGGGCGATG 60.946 60.000 7.83 0.0 44.37 3.84 R
4170 8249 0.037326 TGACCTCTGATGTTGTCGGC 60.037 55.000 0.00 0.0 32.95 5.54 R
5040 9210 0.109342 ATAGCTGATTTGGAGGCCCG 59.891 55.000 0.00 0.0 34.29 6.13 R
6463 10716 0.668535 GGTTTGGGTTGTGTGAGAGC 59.331 55.000 0.00 0.0 0.00 4.09 R
7158 11546 0.108804 TCGATTGACCTCAGTTCGCC 60.109 55.000 5.35 0.0 35.04 5.54 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 2.946785 ACCCGACTAGGAGATAGGTTG 58.053 52.381 0.00 0.00 45.00 3.77
40 41 1.614413 CCGACTAGGAGATAGGTTGGC 59.386 57.143 0.00 0.00 45.00 4.52
157 158 1.519455 GTTCATGTCGGCTCCTCGG 60.519 63.158 0.00 0.00 0.00 4.63
207 209 5.785243 TCAATACGTGACTATTGGTGTCAA 58.215 37.500 0.00 0.00 44.63 3.18
220 222 0.388649 GTGTCAAGTGCGTCGGATCT 60.389 55.000 0.00 0.00 0.00 2.75
238 240 5.163754 CGGATCTATTCAAGGGTTCAACAAC 60.164 44.000 0.00 0.00 0.00 3.32
244 246 0.107557 AAGGGTTCAACAACGACGGT 60.108 50.000 0.00 0.00 32.68 4.83
273 275 3.732849 GAAGCTGGTCCCTGGGGG 61.733 72.222 14.00 0.00 46.11 5.40
296 298 4.201822 GCATGTGAACGGAGATTTCCTAAC 60.202 45.833 0.10 0.00 41.67 2.34
301 303 3.889520 ACGGAGATTTCCTAACTGTCC 57.110 47.619 0.10 0.00 41.67 4.02
309 311 3.655276 TTCCTAACTGTCCTCGACAAC 57.345 47.619 0.00 0.00 42.26 3.32
317 319 1.069378 GTCCTCGACAACGTTAGGCG 61.069 60.000 16.58 16.58 40.69 5.52
333 335 1.066071 AGGCGGGCTCTTCTTTAGAAC 60.066 52.381 0.00 0.00 30.91 3.01
339 341 1.553704 GCTCTTCTTTAGAACGGGGGA 59.446 52.381 0.00 0.00 30.91 4.81
340 342 2.418884 GCTCTTCTTTAGAACGGGGGAG 60.419 54.545 0.00 0.00 30.91 4.30
341 343 2.832733 CTCTTCTTTAGAACGGGGGAGT 59.167 50.000 0.00 0.00 30.91 3.85
357 533 6.949463 ACGGGGGAGTAATCATTTTCTTTTTA 59.051 34.615 0.00 0.00 0.00 1.52
398 580 9.863650 ATCAGATTTGATGTATTCAAGAAGGAT 57.136 29.630 0.00 0.00 44.90 3.24
428 610 2.725203 TTCCTCGGTTTGGTGGAGCG 62.725 60.000 0.00 0.00 39.19 5.03
461 643 1.272781 GACCGACAGAAAGCATCTCG 58.727 55.000 0.00 0.00 35.73 4.04
486 668 1.616159 TCGGGGCTTTCCAAAAAGAG 58.384 50.000 2.21 0.00 43.90 2.85
682 1653 5.007682 GGTTAGTTGTTTGGAAGCAGGATA 58.992 41.667 0.00 0.00 0.00 2.59
687 1658 5.044846 AGTTGTTTGGAAGCAGGATATAGGT 60.045 40.000 0.00 0.00 0.00 3.08
765 1736 0.107456 CCCAGCTGCGGATAACATCT 59.893 55.000 8.66 0.00 0.00 2.90
890 1940 0.037232 AAGAGCAAGCACCGACCTAC 60.037 55.000 0.00 0.00 0.00 3.18
941 1991 1.581447 GCGCTCTTGTTTCAAGGGG 59.419 57.895 0.00 9.74 0.00 4.79
963 2013 1.514553 CCGCAGACTCATGAGCTGA 59.485 57.895 32.97 2.49 35.83 4.26
1095 2145 1.018226 CGCTGCCACTCCTTGAAGAG 61.018 60.000 0.00 0.00 39.91 2.85
1173 2223 8.244113 GTGGTTTATCAGGTAAGGAAATTCAAG 58.756 37.037 0.00 0.00 0.00 3.02
1193 2243 1.745489 CTGCCCCGGTCTTACTTGC 60.745 63.158 0.00 0.00 0.00 4.01
1201 2254 2.496470 CCGGTCTTACTTGCCTTAGTCT 59.504 50.000 0.00 0.00 0.00 3.24
1464 2532 9.732130 AAAGATTACTCTGCTTTGAGTTTCTAT 57.268 29.630 11.51 3.61 44.01 1.98
1524 2593 6.350949 GGCCACAATTTTCCTTGCTAAAGATA 60.351 38.462 0.00 0.00 35.19 1.98
1565 2648 7.446931 ACACAGTTTTACATTCCATGTCATGTA 59.553 33.333 11.84 9.22 43.67 2.29
1566 2649 7.750458 CACAGTTTTACATTCCATGTCATGTAC 59.250 37.037 11.84 6.00 43.67 2.90
1567 2650 7.665559 ACAGTTTTACATTCCATGTCATGTACT 59.334 33.333 11.84 7.68 43.67 2.73
1568 2651 9.161629 CAGTTTTACATTCCATGTCATGTACTA 57.838 33.333 11.84 3.82 43.67 1.82
1569 2652 9.733556 AGTTTTACATTCCATGTCATGTACTAA 57.266 29.630 11.84 8.12 43.67 2.24
1570 2653 9.988350 GTTTTACATTCCATGTCATGTACTAAG 57.012 33.333 11.84 0.00 43.67 2.18
1571 2654 9.733556 TTTTACATTCCATGTCATGTACTAAGT 57.266 29.630 11.84 5.39 43.67 2.24
1787 2871 2.228545 TGGATGCTAAAATGGTGCCA 57.771 45.000 0.00 0.00 0.00 4.92
1996 3095 1.524355 CAGAATTCAGCGACCGCATAG 59.476 52.381 16.97 6.22 44.88 2.23
2013 3112 9.151471 GACCGCATAGTTACACATAAATATGAT 57.849 33.333 15.14 3.68 45.73 2.45
2049 3148 7.450124 TGGAGTAATAATCACGGAGATACTC 57.550 40.000 10.12 10.12 37.66 2.59
2118 3217 3.429960 GCAATCCCCAGATGAAAGCTTTC 60.430 47.826 28.61 28.61 37.69 2.62
2327 3575 1.378762 GGCAAACCACAGGCTCCTA 59.621 57.895 0.00 0.00 35.26 2.94
2382 3655 2.593725 CCGCATCTCAGCCATGGG 60.594 66.667 15.13 0.00 34.70 4.00
2418 3691 8.538409 CCTTCATTTGAAAAGGGTAAATTCAG 57.462 34.615 0.00 0.00 38.72 3.02
2419 3692 8.367156 CCTTCATTTGAAAAGGGTAAATTCAGA 58.633 33.333 0.00 0.00 38.72 3.27
2559 3850 4.832823 CCCTACCTCCAACTGAACAAAAAT 59.167 41.667 0.00 0.00 0.00 1.82
2658 3961 9.318041 CAAGTTTTGTGATGAGATACTTTAACG 57.682 33.333 0.00 0.00 0.00 3.18
2711 4014 7.225931 GTGGATTTTAATAGAGAACGGTGCATA 59.774 37.037 0.00 0.00 0.00 3.14
2907 4534 6.406692 TCCAAATTTGTCAAAATAACGGGA 57.593 33.333 16.73 0.00 34.84 5.14
2909 4536 5.120053 CCAAATTTGTCAAAATAACGGGAGC 59.880 40.000 16.73 0.00 34.84 4.70
2910 4537 5.722021 AATTTGTCAAAATAACGGGAGCT 57.278 34.783 1.31 0.00 34.84 4.09
2911 4538 4.759516 TTTGTCAAAATAACGGGAGCTC 57.240 40.909 4.71 4.71 0.00 4.09
2912 4539 2.706890 TGTCAAAATAACGGGAGCTCC 58.293 47.619 25.59 25.59 0.00 4.70
2915 4542 3.312697 GTCAAAATAACGGGAGCTCCATC 59.687 47.826 33.29 16.58 37.91 3.51
2929 5040 2.109799 CATCGCCCGAGCTCCAAT 59.890 61.111 8.47 0.00 36.60 3.16
3026 5496 7.118723 TCAACTCAGGCCTTAATTGATTACAT 58.881 34.615 6.73 0.00 0.00 2.29
3137 6657 2.680312 AGTGGATGGATGACAACGAG 57.320 50.000 0.00 0.00 0.00 4.18
3157 6678 2.513065 GATGTTGGCACGCTGTTCCG 62.513 60.000 0.00 0.00 0.00 4.30
3373 6906 3.134804 AGGTCAGGTGTCCTATGCATTAC 59.865 47.826 3.54 1.81 31.87 1.89
3381 6914 5.368145 GTGTCCTATGCATTACCTTGATGA 58.632 41.667 3.54 0.00 0.00 2.92
3603 7140 2.141122 AAAGCGCGGGAACAATGGTG 62.141 55.000 8.83 0.00 0.00 4.17
3661 7204 1.588674 TGTTGTTGGTTGCTCGTAGG 58.411 50.000 0.00 0.00 0.00 3.18
3849 7928 1.374758 CGAGCTTCGCTTCCCTGTT 60.375 57.895 0.00 0.00 39.88 3.16
3855 7934 0.181587 TTCGCTTCCCTGTTGAACCA 59.818 50.000 0.00 0.00 0.00 3.67
3874 7953 3.953612 ACCAAACACAGATGAACACACAT 59.046 39.130 0.00 0.00 0.00 3.21
4017 8096 1.275573 AGGCTACCAGAAGAAACGGAC 59.724 52.381 0.00 0.00 0.00 4.79
4061 8140 3.330701 AGTCTGTCAGGGGATAAAAGCAA 59.669 43.478 0.00 0.00 0.00 3.91
4116 8195 6.018180 ACAAGTTTTTCGACGAAGCTAAAGAT 60.018 34.615 10.61 0.00 0.00 2.40
4133 8212 1.005097 AGATTCAGGGAATGCAGTGCA 59.995 47.619 22.22 22.22 44.86 4.57
4144 8223 0.037160 TGCAGTGCATGAGGTGATGT 59.963 50.000 15.37 0.00 31.71 3.06
4613 8713 5.385198 GCACCAGAATATTAATTCCCTCCA 58.615 41.667 0.00 0.00 42.20 3.86
4758 8869 9.165035 CTTCTATAGTAAATACTACTCCCTCCG 57.835 40.741 2.54 0.00 41.18 4.63
4759 8870 8.212259 TCTATAGTAAATACTACTCCCTCCGT 57.788 38.462 2.54 0.00 41.18 4.69
4760 8871 8.317679 TCTATAGTAAATACTACTCCCTCCGTC 58.682 40.741 2.54 0.00 41.18 4.79
4761 8872 4.468713 AGTAAATACTACTCCCTCCGTCC 58.531 47.826 0.00 0.00 34.13 4.79
4762 8873 3.684408 AAATACTACTCCCTCCGTCCT 57.316 47.619 0.00 0.00 0.00 3.85
4763 8874 4.803329 AAATACTACTCCCTCCGTCCTA 57.197 45.455 0.00 0.00 0.00 2.94
4764 8875 4.803329 AATACTACTCCCTCCGTCCTAA 57.197 45.455 0.00 0.00 0.00 2.69
4765 8876 2.732844 ACTACTCCCTCCGTCCTAAG 57.267 55.000 0.00 0.00 0.00 2.18
4766 8877 1.921748 ACTACTCCCTCCGTCCTAAGT 59.078 52.381 0.00 0.00 0.00 2.24
4767 8878 2.299521 CTACTCCCTCCGTCCTAAGTG 58.700 57.143 0.00 0.00 0.00 3.16
4768 8879 0.971447 ACTCCCTCCGTCCTAAGTGC 60.971 60.000 0.00 0.00 0.00 4.40
4769 8880 0.684805 CTCCCTCCGTCCTAAGTGCT 60.685 60.000 0.00 0.00 0.00 4.40
4770 8881 0.627451 TCCCTCCGTCCTAAGTGCTA 59.373 55.000 0.00 0.00 0.00 3.49
4771 8882 1.033574 CCCTCCGTCCTAAGTGCTAG 58.966 60.000 0.00 0.00 0.00 3.42
4772 8883 1.409802 CCCTCCGTCCTAAGTGCTAGA 60.410 57.143 0.00 0.00 0.00 2.43
4773 8884 2.588620 CCTCCGTCCTAAGTGCTAGAT 58.411 52.381 0.00 0.00 0.00 1.98
4774 8885 3.498121 CCCTCCGTCCTAAGTGCTAGATA 60.498 52.174 0.00 0.00 0.00 1.98
4775 8886 3.502979 CCTCCGTCCTAAGTGCTAGATAC 59.497 52.174 0.00 0.00 0.00 2.24
4776 8887 4.135306 CTCCGTCCTAAGTGCTAGATACA 58.865 47.826 0.00 0.00 0.00 2.29
4777 8888 4.726583 TCCGTCCTAAGTGCTAGATACAT 58.273 43.478 0.00 0.00 0.00 2.29
4778 8889 4.760715 TCCGTCCTAAGTGCTAGATACATC 59.239 45.833 0.00 0.00 0.00 3.06
4779 8890 4.082679 CCGTCCTAAGTGCTAGATACATCC 60.083 50.000 0.00 0.00 0.00 3.51
4780 8891 4.519350 CGTCCTAAGTGCTAGATACATCCA 59.481 45.833 0.00 0.00 0.00 3.41
4781 8892 5.184096 CGTCCTAAGTGCTAGATACATCCAT 59.816 44.000 0.00 0.00 0.00 3.41
4782 8893 6.294787 CGTCCTAAGTGCTAGATACATCCATT 60.295 42.308 0.00 0.00 0.00 3.16
4783 8894 7.445945 GTCCTAAGTGCTAGATACATCCATTT 58.554 38.462 0.00 0.00 0.00 2.32
4784 8895 7.386299 GTCCTAAGTGCTAGATACATCCATTTG 59.614 40.741 0.00 0.00 0.00 2.32
4785 8896 7.290014 TCCTAAGTGCTAGATACATCCATTTGA 59.710 37.037 0.00 0.00 0.00 2.69
4786 8897 7.601886 CCTAAGTGCTAGATACATCCATTTGAG 59.398 40.741 0.00 0.00 0.00 3.02
4787 8898 5.303971 AGTGCTAGATACATCCATTTGAGC 58.696 41.667 0.00 0.00 0.00 4.26
4788 8899 5.059161 GTGCTAGATACATCCATTTGAGCA 58.941 41.667 0.00 0.00 35.18 4.26
4789 8900 5.528690 GTGCTAGATACATCCATTTGAGCAA 59.471 40.000 0.00 0.00 38.97 3.91
4790 8901 5.528690 TGCTAGATACATCCATTTGAGCAAC 59.471 40.000 0.00 0.00 34.66 4.17
4791 8902 5.528690 GCTAGATACATCCATTTGAGCAACA 59.471 40.000 0.00 0.00 0.00 3.33
4792 8903 6.038603 GCTAGATACATCCATTTGAGCAACAA 59.961 38.462 0.00 0.00 36.65 2.83
4793 8904 6.446781 AGATACATCCATTTGAGCAACAAG 57.553 37.500 0.00 0.00 39.77 3.16
4794 8905 3.308438 ACATCCATTTGAGCAACAAGC 57.692 42.857 0.00 0.00 46.19 4.01
4806 8917 2.145536 GCAACAAGCTTTTTGGGATGG 58.854 47.619 23.11 0.67 41.15 3.51
4807 8918 2.224257 GCAACAAGCTTTTTGGGATGGA 60.224 45.455 23.11 0.00 41.15 3.41
4808 8919 3.656559 CAACAAGCTTTTTGGGATGGAG 58.343 45.455 16.07 0.00 0.00 3.86
4809 8920 2.250924 ACAAGCTTTTTGGGATGGAGG 58.749 47.619 0.00 0.00 0.00 4.30
4810 8921 1.551883 CAAGCTTTTTGGGATGGAGGG 59.448 52.381 0.00 0.00 0.00 4.30
4811 8922 1.084018 AGCTTTTTGGGATGGAGGGA 58.916 50.000 0.00 0.00 0.00 4.20
4812 8923 1.006400 AGCTTTTTGGGATGGAGGGAG 59.994 52.381 0.00 0.00 0.00 4.30
4863 8976 3.940209 ATTTTTGGCGATTGCTGAAGA 57.060 38.095 4.59 0.00 42.25 2.87
4864 8977 3.724508 TTTTTGGCGATTGCTGAAGAA 57.275 38.095 4.59 0.00 42.25 2.52
4926 9040 4.752514 GGATGCTACCGGCTGTAC 57.247 61.111 0.00 0.00 42.39 2.90
4971 9140 4.545823 TTCCGATTATCGTTGCCAAATC 57.454 40.909 13.73 0.00 38.40 2.17
4997 9167 8.028354 CCATATCACACAAAAGCTCAATTTGTA 58.972 33.333 13.27 1.38 46.30 2.41
4998 9168 9.577110 CATATCACACAAAAGCTCAATTTGTAT 57.423 29.630 13.27 7.70 46.30 2.29
5001 9171 9.630098 ATCACACAAAAGCTCAATTTGTATTAG 57.370 29.630 13.27 5.64 46.30 1.73
5002 9172 7.594758 TCACACAAAAGCTCAATTTGTATTAGC 59.405 33.333 13.27 0.00 46.30 3.09
5003 9173 7.381948 CACACAAAAGCTCAATTTGTATTAGCA 59.618 33.333 13.27 0.00 46.30 3.49
5004 9174 7.925483 ACACAAAAGCTCAATTTGTATTAGCAA 59.075 29.630 13.27 0.00 46.30 3.91
5005 9175 8.216453 CACAAAAGCTCAATTTGTATTAGCAAC 58.784 33.333 13.27 0.00 46.30 4.17
5006 9176 7.925483 ACAAAAGCTCAATTTGTATTAGCAACA 59.075 29.630 12.26 0.00 46.21 3.33
5007 9177 8.763356 CAAAAGCTCAATTTGTATTAGCAACAA 58.237 29.630 9.62 0.00 35.63 2.83
5008 9178 9.492973 AAAAGCTCAATTTGTATTAGCAACAAT 57.507 25.926 9.62 0.00 36.75 2.71
5009 9179 8.470040 AAGCTCAATTTGTATTAGCAACAATG 57.530 30.769 9.62 0.00 36.75 2.82
5010 9180 7.605449 AGCTCAATTTGTATTAGCAACAATGT 58.395 30.769 9.62 0.00 36.75 2.71
5011 9181 8.090214 AGCTCAATTTGTATTAGCAACAATGTT 58.910 29.630 9.62 0.00 36.75 2.71
5012 9182 8.711457 GCTCAATTTGTATTAGCAACAATGTTT 58.289 29.630 0.00 0.00 36.75 2.83
5022 9192 7.804614 TTAGCAACAATGTTTTAAATAGCGG 57.195 32.000 0.00 0.00 0.00 5.52
5023 9193 4.625311 AGCAACAATGTTTTAAATAGCGGC 59.375 37.500 0.00 0.00 0.00 6.53
5024 9194 4.201676 GCAACAATGTTTTAAATAGCGGCC 60.202 41.667 0.00 0.00 0.00 6.13
5025 9195 5.167845 CAACAATGTTTTAAATAGCGGCCT 58.832 37.500 0.00 0.00 0.00 5.19
5026 9196 6.326375 CAACAATGTTTTAAATAGCGGCCTA 58.674 36.000 0.00 0.00 0.00 3.93
5027 9197 6.709018 ACAATGTTTTAAATAGCGGCCTAT 57.291 33.333 0.00 0.00 35.80 2.57
5028 9198 6.503524 ACAATGTTTTAAATAGCGGCCTATG 58.496 36.000 0.00 0.00 34.54 2.23
5029 9199 5.705609 ATGTTTTAAATAGCGGCCTATGG 57.294 39.130 0.00 0.00 34.54 2.74
5030 9200 4.783055 TGTTTTAAATAGCGGCCTATGGA 58.217 39.130 0.00 0.00 34.54 3.41
5031 9201 5.194432 TGTTTTAAATAGCGGCCTATGGAA 58.806 37.500 0.00 0.00 34.54 3.53
5032 9202 5.652891 TGTTTTAAATAGCGGCCTATGGAAA 59.347 36.000 0.00 0.00 34.54 3.13
5033 9203 6.153000 TGTTTTAAATAGCGGCCTATGGAAAA 59.847 34.615 0.00 1.36 34.54 2.29
5034 9204 6.969993 TTTAAATAGCGGCCTATGGAAAAT 57.030 33.333 0.00 0.00 34.54 1.82
5035 9205 8.354426 GTTTTAAATAGCGGCCTATGGAAAATA 58.646 33.333 0.00 0.00 34.43 1.40
5036 9206 7.681939 TTAAATAGCGGCCTATGGAAAATAG 57.318 36.000 0.00 0.00 34.54 1.73
5037 9207 1.897560 AGCGGCCTATGGAAAATAGC 58.102 50.000 0.00 0.00 0.00 2.97
5038 9208 0.517316 GCGGCCTATGGAAAATAGCG 59.483 55.000 0.00 0.00 0.00 4.26
5039 9209 1.156736 CGGCCTATGGAAAATAGCGG 58.843 55.000 0.00 0.00 0.00 5.52
5040 9210 0.881796 GGCCTATGGAAAATAGCGGC 59.118 55.000 0.00 0.00 0.00 6.53
5041 9211 0.517316 GCCTATGGAAAATAGCGGCG 59.483 55.000 0.51 0.51 0.00 6.46
5042 9212 1.156736 CCTATGGAAAATAGCGGCGG 58.843 55.000 9.78 0.00 0.00 6.13
5043 9213 1.156736 CTATGGAAAATAGCGGCGGG 58.843 55.000 9.78 0.00 0.00 6.13
5044 9214 0.887387 TATGGAAAATAGCGGCGGGC 60.887 55.000 9.78 0.00 44.05 6.13
5045 9215 3.592814 GGAAAATAGCGGCGGGCC 61.593 66.667 9.78 0.00 45.17 5.80
5046 9216 2.516225 GAAAATAGCGGCGGGCCT 60.516 61.111 9.78 0.00 45.17 5.19
5047 9217 2.516225 AAAATAGCGGCGGGCCTC 60.516 61.111 9.78 0.00 45.17 4.70
5048 9218 4.564110 AAATAGCGGCGGGCCTCC 62.564 66.667 9.78 1.28 45.17 4.30
5054 9224 4.794648 CGGCGGGCCTCCAAATCA 62.795 66.667 13.99 0.00 0.00 2.57
5055 9225 2.830370 GGCGGGCCTCCAAATCAG 60.830 66.667 7.92 0.00 0.00 2.90
5056 9226 3.521796 GCGGGCCTCCAAATCAGC 61.522 66.667 0.84 0.00 0.00 4.26
5057 9227 2.273449 CGGGCCTCCAAATCAGCT 59.727 61.111 0.84 0.00 0.00 4.24
5058 9228 1.526887 CGGGCCTCCAAATCAGCTA 59.473 57.895 0.84 0.00 0.00 3.32
5059 9229 0.109342 CGGGCCTCCAAATCAGCTAT 59.891 55.000 0.84 0.00 0.00 2.97
5060 9230 1.347707 CGGGCCTCCAAATCAGCTATA 59.652 52.381 0.84 0.00 0.00 1.31
5061 9231 2.613977 CGGGCCTCCAAATCAGCTATAG 60.614 54.545 0.84 0.00 0.00 1.31
5062 9232 2.431454 GGCCTCCAAATCAGCTATAGC 58.569 52.381 17.33 17.33 42.49 2.97
5083 9253 0.109039 GAGCTATAGCGGGCTACAGC 60.109 60.000 20.30 20.30 46.21 4.40
5084 9254 1.444553 GCTATAGCGGGCTACAGCG 60.445 63.158 14.41 0.29 38.95 5.18
5085 9255 1.213013 CTATAGCGGGCTACAGCGG 59.787 63.158 1.91 0.00 43.26 5.52
5086 9256 2.214181 CTATAGCGGGCTACAGCGGG 62.214 65.000 1.91 0.00 43.26 6.13
5090 9260 3.616721 CGGGCTACAGCGGGCTAT 61.617 66.667 0.00 0.00 43.26 2.97
5091 9261 2.829592 GGGCTACAGCGGGCTATT 59.170 61.111 0.00 0.00 43.26 1.73
5092 9262 1.148498 GGGCTACAGCGGGCTATTT 59.852 57.895 0.00 0.00 43.26 1.40
5093 9263 1.166531 GGGCTACAGCGGGCTATTTG 61.167 60.000 0.00 0.00 43.26 2.32
5094 9264 0.463833 GGCTACAGCGGGCTATTTGT 60.464 55.000 0.00 0.00 43.26 2.83
5095 9265 0.657840 GCTACAGCGGGCTATTTGTG 59.342 55.000 0.00 0.00 0.00 3.33
5096 9266 1.742411 GCTACAGCGGGCTATTTGTGA 60.742 52.381 0.00 0.00 0.00 3.58
5097 9267 2.627945 CTACAGCGGGCTATTTGTGAA 58.372 47.619 0.00 0.00 0.00 3.18
5098 9268 1.453155 ACAGCGGGCTATTTGTGAAG 58.547 50.000 0.00 0.00 0.00 3.02
5099 9269 0.734889 CAGCGGGCTATTTGTGAAGG 59.265 55.000 0.00 0.00 0.00 3.46
5100 9270 1.032114 AGCGGGCTATTTGTGAAGGC 61.032 55.000 0.00 0.00 37.55 4.35
5101 9271 1.721487 CGGGCTATTTGTGAAGGCG 59.279 57.895 0.00 0.00 39.08 5.52
5102 9272 1.714899 CGGGCTATTTGTGAAGGCGG 61.715 60.000 0.00 0.00 39.08 6.13
5103 9273 0.679960 GGGCTATTTGTGAAGGCGGT 60.680 55.000 0.00 0.00 39.08 5.68
5104 9274 0.733150 GGCTATTTGTGAAGGCGGTC 59.267 55.000 0.00 0.00 0.00 4.79
5105 9275 1.448985 GCTATTTGTGAAGGCGGTCA 58.551 50.000 0.00 0.00 0.00 4.02
5106 9276 2.017049 GCTATTTGTGAAGGCGGTCAT 58.983 47.619 0.00 0.00 0.00 3.06
5107 9277 2.423538 GCTATTTGTGAAGGCGGTCATT 59.576 45.455 0.00 0.00 0.00 2.57
5108 9278 3.625764 GCTATTTGTGAAGGCGGTCATTA 59.374 43.478 0.00 0.00 0.00 1.90
5109 9279 4.260784 GCTATTTGTGAAGGCGGTCATTAG 60.261 45.833 0.00 0.42 0.00 1.73
5110 9280 1.448985 TTGTGAAGGCGGTCATTAGC 58.551 50.000 0.00 0.00 0.00 3.09
5112 9282 1.153449 TGAAGGCGGTCATTAGCGG 60.153 57.895 0.17 0.00 46.48 5.52
5116 9286 3.573491 GCGGTCATTAGCGGCACC 61.573 66.667 1.45 0.00 46.48 5.01
5117 9287 2.895372 CGGTCATTAGCGGCACCC 60.895 66.667 1.45 0.00 42.79 4.61
5118 9288 2.590092 GGTCATTAGCGGCACCCT 59.410 61.111 1.45 0.00 0.00 4.34
5119 9289 1.819632 GGTCATTAGCGGCACCCTG 60.820 63.158 1.45 0.00 0.00 4.45
5120 9290 2.124736 TCATTAGCGGCACCCTGC 60.125 61.111 1.45 0.00 44.08 4.85
5121 9291 2.124570 CATTAGCGGCACCCTGCT 60.125 61.111 1.45 2.32 44.28 4.24
5128 9298 3.369921 GGCACCCTGCTGAAAAGG 58.630 61.111 0.00 0.00 44.28 3.11
5129 9299 2.653115 GCACCCTGCTGAAAAGGC 59.347 61.111 0.00 0.00 40.96 4.35
5130 9300 1.905354 GCACCCTGCTGAAAAGGCT 60.905 57.895 0.00 0.00 40.96 4.58
5131 9301 0.609131 GCACCCTGCTGAAAAGGCTA 60.609 55.000 0.00 0.00 40.96 3.93
5132 9302 1.957113 GCACCCTGCTGAAAAGGCTAT 60.957 52.381 0.00 0.00 40.96 2.97
5133 9303 2.683742 GCACCCTGCTGAAAAGGCTATA 60.684 50.000 0.00 0.00 40.96 1.31
5134 9304 3.209410 CACCCTGCTGAAAAGGCTATAG 58.791 50.000 0.00 0.00 33.07 1.31
5135 9305 2.225467 CCCTGCTGAAAAGGCTATAGC 58.775 52.381 16.78 16.78 41.14 2.97
5136 9306 1.869767 CCTGCTGAAAAGGCTATAGCG 59.130 52.381 18.30 4.04 43.26 4.26
5137 9307 1.869767 CTGCTGAAAAGGCTATAGCGG 59.130 52.381 18.30 6.64 43.26 5.52
5138 9308 1.230324 GCTGAAAAGGCTATAGCGGG 58.770 55.000 18.30 4.63 43.26 6.13
5139 9309 1.230324 CTGAAAAGGCTATAGCGGGC 58.770 55.000 18.30 5.04 43.26 6.13
5140 9310 0.837272 TGAAAAGGCTATAGCGGGCT 59.163 50.000 18.30 7.37 43.26 5.19
5141 9311 2.037251 CTGAAAAGGCTATAGCGGGCTA 59.963 50.000 18.30 2.42 43.26 3.93
5142 9312 2.637872 TGAAAAGGCTATAGCGGGCTAT 59.362 45.455 18.30 16.61 43.26 2.97
5143 9313 3.835978 TGAAAAGGCTATAGCGGGCTATA 59.164 43.478 18.30 17.02 43.26 1.31
5148 9318 1.676746 CTATAGCGGGCTATAGCGGA 58.323 55.000 26.16 7.19 46.26 5.54
5149 9319 1.604755 CTATAGCGGGCTATAGCGGAG 59.395 57.143 26.16 12.52 46.26 4.63
5150 9320 1.668101 ATAGCGGGCTATAGCGGAGC 61.668 60.000 22.13 22.13 42.31 4.70
5162 9332 3.998156 CGGAGCTATAGCCGGCTA 58.002 61.111 36.88 36.88 43.67 3.93
5163 9333 2.494677 CGGAGCTATAGCCGGCTAT 58.505 57.895 42.09 42.09 43.67 2.97
5164 9334 0.818296 CGGAGCTATAGCCGGCTATT 59.182 55.000 44.65 31.45 43.67 1.73
5165 9335 1.204941 CGGAGCTATAGCCGGCTATTT 59.795 52.381 44.65 31.93 43.67 1.40
5166 9336 2.426024 CGGAGCTATAGCCGGCTATTTA 59.574 50.000 44.65 30.51 43.67 1.40
5167 9337 3.119245 CGGAGCTATAGCCGGCTATTTAA 60.119 47.826 44.65 29.85 43.67 1.52
5168 9338 4.619863 CGGAGCTATAGCCGGCTATTTAAA 60.620 45.833 44.65 29.52 43.67 1.52
5169 9339 5.243207 GGAGCTATAGCCGGCTATTTAAAA 58.757 41.667 44.65 29.19 43.38 1.52
5170 9340 5.121925 GGAGCTATAGCCGGCTATTTAAAAC 59.878 44.000 44.65 30.15 43.38 2.43
5171 9341 5.866207 AGCTATAGCCGGCTATTTAAAACT 58.134 37.500 44.65 29.88 43.38 2.66
5172 9342 7.001099 AGCTATAGCCGGCTATTTAAAACTA 57.999 36.000 44.65 27.23 43.38 2.24
5173 9343 7.621796 AGCTATAGCCGGCTATTTAAAACTAT 58.378 34.615 44.65 26.21 43.38 2.12
5174 9344 7.549488 AGCTATAGCCGGCTATTTAAAACTATG 59.451 37.037 44.65 24.19 43.38 2.23
5212 9386 1.872952 CGGTCTGCATTCAACTGACAA 59.127 47.619 2.90 0.00 37.63 3.18
5342 9516 2.374170 TCCTCTGTTTACCAAGTTCCCC 59.626 50.000 0.00 0.00 0.00 4.81
5357 9532 4.026052 AGTTCCCCAATTTCCATCATCAC 58.974 43.478 0.00 0.00 0.00 3.06
5380 9558 3.370978 ACACTGCATGCTAATACAACGAC 59.629 43.478 20.33 0.00 0.00 4.34
5544 9725 1.752498 GCTTCATCACATCAATGGCCA 59.248 47.619 8.56 8.56 0.00 5.36
5657 9838 2.282555 CGTGCAGGAACATTCTGATACG 59.717 50.000 0.00 0.00 37.69 3.06
5706 9887 5.414454 GTGGACTCCAATATGTTTGCAAGTA 59.586 40.000 0.00 0.00 34.18 2.24
5801 9994 3.861886 GCTTAATTGTTGGCATGTGCACT 60.862 43.478 19.41 0.15 44.36 4.40
5804 9997 0.102663 TTGTTGGCATGTGCACTGTG 59.897 50.000 19.41 17.16 44.36 3.66
6212 10432 8.709308 AGCTCATATCTAATTACAGGTTCAAGT 58.291 33.333 0.00 0.00 0.00 3.16
6299 10546 4.307432 ACTTAACTCGGAACATGTGTCAG 58.693 43.478 0.00 0.59 0.00 3.51
6417 10670 6.413892 TCCACTATCAAACAATACAGCATCA 58.586 36.000 0.00 0.00 0.00 3.07
6454 10707 1.788308 CTCAAACGTGCTTTTGCCATG 59.212 47.619 0.00 0.00 46.87 3.66
6456 10709 1.932511 CAAACGTGCTTTTGCCATGTT 59.067 42.857 0.00 0.00 46.87 2.71
6457 10710 2.307934 AACGTGCTTTTGCCATGTTT 57.692 40.000 0.00 0.00 46.87 2.83
6458 10711 3.444703 AACGTGCTTTTGCCATGTTTA 57.555 38.095 0.00 0.00 46.87 2.01
6459 10712 2.738135 ACGTGCTTTTGCCATGTTTAC 58.262 42.857 0.00 0.00 46.87 2.01
6460 10713 2.360801 ACGTGCTTTTGCCATGTTTACT 59.639 40.909 0.00 0.00 46.87 2.24
6462 10715 3.801594 CGTGCTTTTGCCATGTTTACTTT 59.198 39.130 0.00 0.00 46.87 2.66
6463 10716 4.317980 CGTGCTTTTGCCATGTTTACTTTG 60.318 41.667 0.00 0.00 46.87 2.77
6465 10718 3.809279 GCTTTTGCCATGTTTACTTTGCT 59.191 39.130 0.00 0.00 40.15 3.91
6545 10806 5.615544 CGAACCATGTTTACTTTGCTCTCAG 60.616 44.000 0.00 0.00 0.00 3.35
6563 10824 3.888323 CTCAGCTCTGCTCCTTACTGATA 59.112 47.826 0.00 0.00 36.40 2.15
6569 10830 6.765512 AGCTCTGCTCCTTACTGATATTTTTC 59.234 38.462 0.00 0.00 30.62 2.29
6570 10831 6.017523 GCTCTGCTCCTTACTGATATTTTTCC 60.018 42.308 0.00 0.00 0.00 3.13
6602 10867 4.420522 TGCAAGTGATATCTGCATGGTA 57.579 40.909 12.67 0.00 0.00 3.25
6693 10958 4.275196 GGTCAAGAAGGTAACCAACTTCAC 59.725 45.833 5.32 2.85 44.20 3.18
6774 11128 4.520492 ACAATAGACTTTTGGCACCAAGAG 59.480 41.667 16.23 16.23 41.91 2.85
6847 11207 2.505819 AGATTTGACCAGGGCTTACGAT 59.494 45.455 0.00 0.00 0.00 3.73
6857 11217 4.692625 CCAGGGCTTACGATAATTCTGATG 59.307 45.833 0.00 0.00 0.00 3.07
6944 11304 1.661341 ATCTTCAACCTCTGCATCGC 58.339 50.000 0.00 0.00 0.00 4.58
7062 11431 7.499232 ACTTTATCTTTTAGGATTGTGATCGGG 59.501 37.037 0.00 0.00 32.84 5.14
7072 11441 0.172578 TGTGATCGGGCAAGAGTACG 59.827 55.000 0.00 0.00 0.00 3.67
7158 11546 5.972107 ATGAGGAAATGGACAACTTTCAG 57.028 39.130 0.00 0.00 33.89 3.02
7205 11594 4.754322 TCTTAGCAGATGCACGTTTATGA 58.246 39.130 7.68 0.00 45.16 2.15
7223 11612 9.146984 CGTTTATGAAGTGAACTCTGGTTTATA 57.853 33.333 0.00 0.00 35.58 0.98
7264 11653 5.574891 ATTTTAGTATTTGGCACGCATCA 57.425 34.783 0.00 0.00 0.00 3.07
7266 11655 1.382522 AGTATTTGGCACGCATCAGG 58.617 50.000 0.00 0.00 0.00 3.86
7273 11662 2.461110 GCACGCATCAGGGGTTACG 61.461 63.158 0.00 0.00 41.32 3.18
7286 11675 1.002576 GGGTTACGTTTTGGTGAACCG 60.003 52.381 7.80 0.00 40.43 4.44
7293 11682 2.544686 CGTTTTGGTGAACCGTATGTCA 59.455 45.455 0.00 0.00 39.43 3.58
7296 11685 2.912690 TGGTGAACCGTATGTCAACA 57.087 45.000 0.00 0.00 39.43 3.33
7299 11688 3.071479 GGTGAACCGTATGTCAACATGT 58.929 45.455 5.89 0.00 37.15 3.21
7301 11690 4.092383 GGTGAACCGTATGTCAACATGTAC 59.908 45.833 0.00 0.00 37.15 2.90
7304 11693 3.259064 ACCGTATGTCAACATGTACTGC 58.741 45.455 0.00 0.00 37.15 4.40
7366 11755 1.825281 GCTGACTCTGCCCACTGTCT 61.825 60.000 0.00 0.00 0.00 3.41
7387 11777 9.994432 CTGTCTGATAAAATAGCACTTTTAAGG 57.006 33.333 7.33 3.00 35.02 2.69
7397 11787 4.278310 AGCACTTTTAAGGTGTTTCCACT 58.722 39.130 8.90 0.00 41.53 4.00
7399 11789 5.889289 AGCACTTTTAAGGTGTTTCCACTTA 59.111 36.000 8.90 0.00 41.53 2.24
7403 11793 7.913821 CACTTTTAAGGTGTTTCCACTTACTTC 59.086 37.037 0.00 0.00 41.53 3.01
7404 11794 6.947644 TTTAAGGTGTTTCCACTTACTTCC 57.052 37.500 0.00 0.00 41.53 3.46
7406 11796 4.086706 AGGTGTTTCCACTTACTTCCTG 57.913 45.455 0.00 0.00 41.53 3.86
7452 12224 4.625972 TTAATCATAGCTGTCGACACGA 57.374 40.909 15.76 8.65 0.00 4.35
7513 12286 3.810386 GTCTGTTGTGGAAAGAGAAGTCC 59.190 47.826 0.00 0.00 0.00 3.85
7551 14506 8.974060 AGTTTTCTGTTCAGTTTAATACCTGA 57.026 30.769 0.00 0.00 0.00 3.86
7579 14544 3.311486 AGCACAAGAGACTTCAGCTAC 57.689 47.619 0.00 0.00 0.00 3.58
7669 14639 7.981789 CAGGTTCAGCTAATCAGTAAAGATGTA 59.018 37.037 0.00 0.00 0.00 2.29
7670 14640 8.709308 AGGTTCAGCTAATCAGTAAAGATGTAT 58.291 33.333 0.00 0.00 0.00 2.29
7731 14702 0.454600 CCTGCATTCAAATCTGCGCT 59.545 50.000 9.73 0.00 41.32 5.92
7815 14786 3.680786 TGGCTCGTGGTCGTGGAG 61.681 66.667 0.00 0.00 38.33 3.86
7929 14908 2.109799 CCGCCGGAAGCAGATGAT 59.890 61.111 5.05 0.00 44.04 2.45
7933 14912 2.249535 CCGGAAGCAGATGATGGCG 61.250 63.158 0.00 0.00 34.54 5.69
8089 15146 4.586235 AGGTGCGGTGGCTGCTTT 62.586 61.111 0.00 0.00 40.82 3.51
8090 15147 3.605664 GGTGCGGTGGCTGCTTTT 61.606 61.111 0.00 0.00 40.82 2.27
8091 15148 2.417097 GTGCGGTGGCTGCTTTTT 59.583 55.556 0.00 0.00 40.82 1.94
8116 15173 8.715190 TTTTTAAGGTGAAACTAGGGCTTTAT 57.285 30.769 0.00 0.00 36.74 1.40
8117 15174 8.715190 TTTTAAGGTGAAACTAGGGCTTTATT 57.285 30.769 0.00 0.00 36.74 1.40
8118 15175 7.933215 TTAAGGTGAAACTAGGGCTTTATTC 57.067 36.000 0.00 0.00 36.74 1.75
8119 15176 5.514500 AGGTGAAACTAGGGCTTTATTCA 57.486 39.130 0.00 0.00 36.74 2.57
8120 15177 6.079712 AGGTGAAACTAGGGCTTTATTCAT 57.920 37.500 0.00 0.00 36.74 2.57
8121 15178 6.122964 AGGTGAAACTAGGGCTTTATTCATC 58.877 40.000 0.00 0.00 36.74 2.92
8122 15179 5.885912 GGTGAAACTAGGGCTTTATTCATCA 59.114 40.000 0.00 0.00 36.74 3.07
8123 15180 6.377146 GGTGAAACTAGGGCTTTATTCATCAA 59.623 38.462 0.00 0.00 36.74 2.57
8124 15181 7.251281 GTGAAACTAGGGCTTTATTCATCAAC 58.749 38.462 0.00 0.00 0.00 3.18
8125 15182 6.377146 TGAAACTAGGGCTTTATTCATCAACC 59.623 38.462 0.00 0.00 0.00 3.77
8126 15183 5.450818 ACTAGGGCTTTATTCATCAACCA 57.549 39.130 0.00 0.00 0.00 3.67
8127 15184 5.826643 ACTAGGGCTTTATTCATCAACCAA 58.173 37.500 0.00 0.00 0.00 3.67
8128 15185 6.252995 ACTAGGGCTTTATTCATCAACCAAA 58.747 36.000 0.00 0.00 0.00 3.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.181436 CCAACCTATCTCCTAGTCGGGTA 60.181 52.174 0.00 0.00 0.00 3.69
38 39 3.078560 CGCGAGGACTAAAACGCC 58.921 61.111 0.00 0.00 46.69 5.68
143 144 2.893398 GTTCCGAGGAGCCGACAT 59.107 61.111 0.00 0.00 0.00 3.06
157 158 3.736720 AGAAACCTTAACCTCACCGTTC 58.263 45.455 0.00 0.00 0.00 3.95
163 165 4.141892 TGACAACGAGAAACCTTAACCTCA 60.142 41.667 0.00 0.00 0.00 3.86
200 202 1.352156 GATCCGACGCACTTGACACC 61.352 60.000 0.00 0.00 0.00 4.16
201 203 0.388649 AGATCCGACGCACTTGACAC 60.389 55.000 0.00 0.00 0.00 3.67
204 206 2.425668 TGAATAGATCCGACGCACTTGA 59.574 45.455 0.00 0.00 0.00 3.02
207 209 2.223829 CCTTGAATAGATCCGACGCACT 60.224 50.000 0.00 0.00 0.00 4.40
220 222 3.495377 CGTCGTTGTTGAACCCTTGAATA 59.505 43.478 0.00 0.00 0.00 1.75
244 246 3.640407 AGCTTCCCAGAGCCGCAA 61.640 61.111 0.00 0.00 43.74 4.85
273 275 2.832672 GGAAATCTCCGTTCACATGC 57.167 50.000 0.00 0.00 30.03 4.06
296 298 1.978542 CCTAACGTTGTCGAGGACAG 58.021 55.000 11.99 0.00 43.69 3.51
301 303 1.804326 CCCGCCTAACGTTGTCGAG 60.804 63.158 11.99 0.00 41.42 4.04
309 311 0.391263 AAAGAAGAGCCCGCCTAACG 60.391 55.000 0.00 0.00 43.15 3.18
317 319 1.407025 CCCCGTTCTAAAGAAGAGCCC 60.407 57.143 0.00 0.00 35.05 5.19
333 335 5.914898 AAAAGAAAATGATTACTCCCCCG 57.085 39.130 0.00 0.00 0.00 5.73
398 580 4.563580 CCAAACCGAGGAAAGAGATGAGAA 60.564 45.833 0.00 0.00 0.00 2.87
428 610 1.395954 GTCGGTCCGGCATTCTTTAAC 59.604 52.381 11.94 0.00 0.00 2.01
461 643 3.209812 GGAAAGCCCCGAATCGCC 61.210 66.667 0.00 0.00 0.00 5.54
653 835 1.569548 TCCAAACAACTAACCCACCCA 59.430 47.619 0.00 0.00 0.00 4.51
682 1653 5.898120 ACAGATCTGCATCTACCTACCTAT 58.102 41.667 22.83 0.00 37.25 2.57
687 1658 4.105537 AGGAGACAGATCTGCATCTACCTA 59.894 45.833 22.83 0.00 45.45 3.08
765 1736 9.706691 AAAAAGTATGAAGACGAGTTTCAGATA 57.293 29.630 0.00 0.00 37.91 1.98
941 1991 1.812922 CTCATGAGTCTGCGGGTGC 60.813 63.158 14.95 0.00 43.20 5.01
956 2006 2.290514 CCCCTGAAACAAGATCAGCTCA 60.291 50.000 0.00 0.00 42.36 4.26
963 2013 4.788617 ACCATAGTACCCCTGAAACAAGAT 59.211 41.667 0.00 0.00 0.00 2.40
1095 2145 3.124297 CAGCGGAGAAACTCTTTGTGATC 59.876 47.826 0.00 0.00 0.00 2.92
1173 2223 0.391263 CAAGTAAGACCGGGGCAGTC 60.391 60.000 6.32 0.00 34.31 3.51
1193 2243 9.796120 CACTTCTTAGATTAACTGAGACTAAGG 57.204 37.037 0.00 0.00 40.20 2.69
1201 2254 6.173339 CCTTGCCACTTCTTAGATTAACTGA 58.827 40.000 0.00 0.00 0.00 3.41
2013 3112 9.431887 GTGATTATTACTCCAAGACTGTACAAA 57.568 33.333 0.00 0.00 0.00 2.83
2049 3148 5.484715 TCACTATAACCTTTTTCTCCGGTG 58.515 41.667 0.00 0.00 0.00 4.94
2200 3302 7.798596 AGTTGGAGTTGATCAAGCAATATAG 57.201 36.000 8.80 0.00 0.00 1.31
2327 3575 2.191375 CCATGGCTGAGATGCGGT 59.809 61.111 0.00 0.00 0.00 5.68
2382 3655 5.643379 TTCAAATGAAGGGAAGTGTATGC 57.357 39.130 0.00 0.00 0.00 3.14
2418 3691 3.002348 AGCGTTCTTGTTTAGCACTTGTC 59.998 43.478 0.00 0.00 0.00 3.18
2419 3692 2.943033 AGCGTTCTTGTTTAGCACTTGT 59.057 40.909 0.00 0.00 0.00 3.16
2699 4002 2.665649 TCACGAATATGCACCGTTCT 57.334 45.000 0.00 0.00 33.96 3.01
2704 4007 5.473931 AGTATCTCATCACGAATATGCACC 58.526 41.667 0.00 0.00 0.00 5.01
2711 4014 8.820933 CACATGTTAAAGTATCTCATCACGAAT 58.179 33.333 0.00 0.00 0.00 3.34
2826 4150 9.881773 AAACAATTCCACATATACATAGGGATT 57.118 29.630 0.00 0.00 0.00 3.01
2880 4507 7.225734 CCCGTTATTTTGACAAATTTGGAAGTT 59.774 33.333 21.74 0.34 34.29 2.66
2900 4527 2.792947 GGCGATGGAGCTCCCGTTA 61.793 63.158 29.95 11.93 37.93 3.18
2909 4536 4.292178 GGAGCTCGGGCGATGGAG 62.292 72.222 7.83 0.00 44.37 3.86
2911 4538 2.099652 TATTGGAGCTCGGGCGATGG 62.100 60.000 7.83 0.00 44.37 3.51
2912 4539 0.946221 GTATTGGAGCTCGGGCGATG 60.946 60.000 7.83 0.00 44.37 3.84
2915 4542 1.883084 GTGTATTGGAGCTCGGGCG 60.883 63.158 7.83 0.00 44.37 6.13
3002 5466 6.757897 TGTAATCAATTAAGGCCTGAGTTG 57.242 37.500 17.58 17.58 0.00 3.16
3026 5496 3.197265 CACATGCATCGTCATTACCAGA 58.803 45.455 0.00 0.00 0.00 3.86
3137 6657 1.210155 GAACAGCGTGCCAACATCC 59.790 57.895 0.00 0.00 0.00 3.51
3157 6678 2.204237 CAAAGCAAGGCCTTCAACAAC 58.796 47.619 17.29 0.90 0.00 3.32
3430 6967 3.476552 TCCAACTTTCAAGTACCTGCAG 58.523 45.455 6.78 6.78 38.57 4.41
3603 7140 7.755582 ACACAGAAGCTCAAATTTTAAACAC 57.244 32.000 0.00 0.00 0.00 3.32
3661 7204 6.635030 AACTAACTTGACCTCATCCAAAAC 57.365 37.500 0.00 0.00 0.00 2.43
3702 7253 7.035612 GGTCAAGGAATTTTATAACAAGGCAG 58.964 38.462 0.00 0.00 0.00 4.85
3849 7928 4.013050 TGTGTTCATCTGTGTTTGGTTCA 58.987 39.130 0.00 0.00 0.00 3.18
3855 7934 7.939782 TGAATAATGTGTGTTCATCTGTGTTT 58.060 30.769 0.00 0.00 0.00 2.83
3874 7953 6.540189 GTGCTCTTCTTCATAAGCCTGAATAA 59.460 38.462 0.00 0.00 34.76 1.40
4017 8096 3.254411 TGCTCTGCAGGATTAGATCGTAG 59.746 47.826 15.13 0.00 33.32 3.51
4061 8140 4.430441 AGATTGGTCTCTCAAAGTAGGGT 58.570 43.478 0.00 0.00 0.00 4.34
4133 8212 6.469782 AAACAGTTTTCAACATCACCTCAT 57.530 33.333 0.00 0.00 0.00 2.90
4170 8249 0.037326 TGACCTCTGATGTTGTCGGC 60.037 55.000 0.00 0.00 32.95 5.54
4748 8859 1.684248 GCACTTAGGACGGAGGGAGTA 60.684 57.143 0.00 0.00 0.00 2.59
4749 8860 0.971447 GCACTTAGGACGGAGGGAGT 60.971 60.000 0.00 0.00 0.00 3.85
4750 8861 0.684805 AGCACTTAGGACGGAGGGAG 60.685 60.000 0.00 0.00 0.00 4.30
4751 8862 0.627451 TAGCACTTAGGACGGAGGGA 59.373 55.000 0.00 0.00 0.00 4.20
4752 8863 1.033574 CTAGCACTTAGGACGGAGGG 58.966 60.000 0.00 0.00 0.00 4.30
4753 8864 2.054232 TCTAGCACTTAGGACGGAGG 57.946 55.000 0.00 0.00 0.00 4.30
4754 8865 4.135306 TGTATCTAGCACTTAGGACGGAG 58.865 47.826 0.00 0.00 0.00 4.63
4755 8866 4.160642 TGTATCTAGCACTTAGGACGGA 57.839 45.455 0.00 0.00 0.00 4.69
4756 8867 4.082679 GGATGTATCTAGCACTTAGGACGG 60.083 50.000 0.00 0.00 0.00 4.79
4757 8868 4.519350 TGGATGTATCTAGCACTTAGGACG 59.481 45.833 0.00 0.00 0.00 4.79
4758 8869 6.597832 ATGGATGTATCTAGCACTTAGGAC 57.402 41.667 0.00 0.00 0.00 3.85
4759 8870 7.290014 TCAAATGGATGTATCTAGCACTTAGGA 59.710 37.037 0.00 0.00 0.00 2.94
4760 8871 7.445121 TCAAATGGATGTATCTAGCACTTAGG 58.555 38.462 0.00 0.00 0.00 2.69
4761 8872 7.117523 GCTCAAATGGATGTATCTAGCACTTAG 59.882 40.741 0.00 0.00 0.00 2.18
4762 8873 6.931281 GCTCAAATGGATGTATCTAGCACTTA 59.069 38.462 0.00 0.00 0.00 2.24
4763 8874 5.762218 GCTCAAATGGATGTATCTAGCACTT 59.238 40.000 0.00 0.00 0.00 3.16
4764 8875 5.163269 TGCTCAAATGGATGTATCTAGCACT 60.163 40.000 0.00 0.00 32.88 4.40
4765 8876 5.059161 TGCTCAAATGGATGTATCTAGCAC 58.941 41.667 0.00 0.00 32.88 4.40
4766 8877 5.294734 TGCTCAAATGGATGTATCTAGCA 57.705 39.130 0.00 0.00 35.26 3.49
4767 8878 5.528690 TGTTGCTCAAATGGATGTATCTAGC 59.471 40.000 0.00 0.00 0.00 3.42
4768 8879 7.558161 TTGTTGCTCAAATGGATGTATCTAG 57.442 36.000 0.00 0.00 32.64 2.43
4769 8880 6.038603 GCTTGTTGCTCAAATGGATGTATCTA 59.961 38.462 0.00 0.00 38.95 1.98
4770 8881 5.163581 GCTTGTTGCTCAAATGGATGTATCT 60.164 40.000 0.00 0.00 38.95 1.98
4771 8882 5.039333 GCTTGTTGCTCAAATGGATGTATC 58.961 41.667 0.00 0.00 38.95 2.24
4772 8883 5.002464 GCTTGTTGCTCAAATGGATGTAT 57.998 39.130 0.00 0.00 38.95 2.29
4773 8884 4.439305 GCTTGTTGCTCAAATGGATGTA 57.561 40.909 0.00 0.00 38.95 2.29
4774 8885 3.308438 GCTTGTTGCTCAAATGGATGT 57.692 42.857 0.00 0.00 38.95 3.06
4786 8897 2.145536 CCATCCCAAAAAGCTTGTTGC 58.854 47.619 21.96 0.00 43.29 4.17
4787 8898 3.555586 CCTCCATCCCAAAAAGCTTGTTG 60.556 47.826 20.67 20.67 0.00 3.33
4788 8899 2.634453 CCTCCATCCCAAAAAGCTTGTT 59.366 45.455 0.00 0.00 0.00 2.83
4789 8900 2.250924 CCTCCATCCCAAAAAGCTTGT 58.749 47.619 0.00 0.00 0.00 3.16
4790 8901 1.551883 CCCTCCATCCCAAAAAGCTTG 59.448 52.381 0.00 0.00 0.00 4.01
4791 8902 1.432807 TCCCTCCATCCCAAAAAGCTT 59.567 47.619 0.00 0.00 0.00 3.74
4792 8903 1.006400 CTCCCTCCATCCCAAAAAGCT 59.994 52.381 0.00 0.00 0.00 3.74
4793 8904 1.272704 ACTCCCTCCATCCCAAAAAGC 60.273 52.381 0.00 0.00 0.00 3.51
4794 8905 2.907458 ACTCCCTCCATCCCAAAAAG 57.093 50.000 0.00 0.00 0.00 2.27
4795 8906 2.310647 GGTACTCCCTCCATCCCAAAAA 59.689 50.000 0.00 0.00 0.00 1.94
4796 8907 1.920351 GGTACTCCCTCCATCCCAAAA 59.080 52.381 0.00 0.00 0.00 2.44
4797 8908 1.203505 TGGTACTCCCTCCATCCCAAA 60.204 52.381 0.00 0.00 0.00 3.28
4798 8909 0.419865 TGGTACTCCCTCCATCCCAA 59.580 55.000 0.00 0.00 0.00 4.12
4799 8910 0.647738 ATGGTACTCCCTCCATCCCA 59.352 55.000 0.00 0.00 39.92 4.37
4800 8911 1.059913 CATGGTACTCCCTCCATCCC 58.940 60.000 0.00 0.00 41.79 3.85
4801 8912 1.807814 ACATGGTACTCCCTCCATCC 58.192 55.000 0.00 0.00 41.79 3.51
4802 8913 3.577919 AGTACATGGTACTCCCTCCATC 58.422 50.000 3.30 0.00 41.79 3.51
4803 8914 3.708236 AGTACATGGTACTCCCTCCAT 57.292 47.619 3.30 0.00 44.15 3.41
4804 8915 3.104512 CAAGTACATGGTACTCCCTCCA 58.895 50.000 9.29 0.00 38.14 3.86
4805 8916 2.158943 GCAAGTACATGGTACTCCCTCC 60.159 54.545 9.29 0.00 0.00 4.30
4806 8917 2.500098 TGCAAGTACATGGTACTCCCTC 59.500 50.000 9.29 1.46 0.00 4.30
4807 8918 2.501723 CTGCAAGTACATGGTACTCCCT 59.498 50.000 9.29 0.00 0.00 4.20
4808 8919 2.906354 CTGCAAGTACATGGTACTCCC 58.094 52.381 9.29 4.93 0.00 4.30
4863 8976 3.753272 CACCCTTCTTCGATGACAACATT 59.247 43.478 0.00 0.00 36.82 2.71
4864 8977 3.007940 TCACCCTTCTTCGATGACAACAT 59.992 43.478 0.00 0.00 39.67 2.71
4926 9040 8.850454 AAAACCGTCATTTGAAAATATATCGG 57.150 30.769 13.35 13.35 40.00 4.18
4939 9108 4.632688 ACGATAATCGGAAAACCGTCATTT 59.367 37.500 8.46 2.52 45.59 2.32
4940 9109 4.186159 ACGATAATCGGAAAACCGTCATT 58.814 39.130 8.46 5.01 45.59 2.57
4959 9128 3.376859 GTGTGATATGGATTTGGCAACGA 59.623 43.478 0.00 0.00 42.51 3.85
4971 9140 6.869913 ACAAATTGAGCTTTTGTGTGATATGG 59.130 34.615 12.97 0.00 43.65 2.74
4997 9167 7.010091 GCCGCTATTTAAAACATTGTTGCTAAT 59.990 33.333 2.13 5.82 0.00 1.73
4998 9168 6.309251 GCCGCTATTTAAAACATTGTTGCTAA 59.691 34.615 2.13 2.02 0.00 3.09
4999 9169 5.802956 GCCGCTATTTAAAACATTGTTGCTA 59.197 36.000 2.13 0.00 0.00 3.49
5000 9170 4.625311 GCCGCTATTTAAAACATTGTTGCT 59.375 37.500 2.13 0.00 0.00 3.91
5001 9171 4.201676 GGCCGCTATTTAAAACATTGTTGC 60.202 41.667 2.13 0.00 0.00 4.17
5002 9172 5.167845 AGGCCGCTATTTAAAACATTGTTG 58.832 37.500 2.13 0.00 0.00 3.33
5003 9173 5.400066 AGGCCGCTATTTAAAACATTGTT 57.600 34.783 0.00 0.00 0.00 2.83
5004 9174 6.460953 CCATAGGCCGCTATTTAAAACATTGT 60.461 38.462 0.00 0.00 0.00 2.71
5005 9175 5.920273 CCATAGGCCGCTATTTAAAACATTG 59.080 40.000 0.00 0.00 0.00 2.82
5006 9176 5.830991 TCCATAGGCCGCTATTTAAAACATT 59.169 36.000 0.00 0.00 0.00 2.71
5007 9177 5.381757 TCCATAGGCCGCTATTTAAAACAT 58.618 37.500 0.00 0.00 0.00 2.71
5008 9178 4.783055 TCCATAGGCCGCTATTTAAAACA 58.217 39.130 0.00 0.00 0.00 2.83
5009 9179 5.761165 TTCCATAGGCCGCTATTTAAAAC 57.239 39.130 0.00 0.00 0.00 2.43
5010 9180 6.777213 TTTTCCATAGGCCGCTATTTAAAA 57.223 33.333 0.00 0.00 0.00 1.52
5011 9181 6.969993 ATTTTCCATAGGCCGCTATTTAAA 57.030 33.333 0.00 0.00 0.00 1.52
5012 9182 6.150474 GCTATTTTCCATAGGCCGCTATTTAA 59.850 38.462 0.00 0.00 0.00 1.52
5013 9183 5.646360 GCTATTTTCCATAGGCCGCTATTTA 59.354 40.000 0.00 0.00 0.00 1.40
5014 9184 4.459337 GCTATTTTCCATAGGCCGCTATTT 59.541 41.667 0.00 0.00 0.00 1.40
5015 9185 4.010349 GCTATTTTCCATAGGCCGCTATT 58.990 43.478 0.00 0.00 0.00 1.73
5016 9186 3.610911 GCTATTTTCCATAGGCCGCTAT 58.389 45.455 0.00 0.00 0.00 2.97
5017 9187 2.611971 CGCTATTTTCCATAGGCCGCTA 60.612 50.000 0.00 0.00 0.00 4.26
5018 9188 1.878102 CGCTATTTTCCATAGGCCGCT 60.878 52.381 0.00 0.00 0.00 5.52
5019 9189 0.517316 CGCTATTTTCCATAGGCCGC 59.483 55.000 0.00 0.00 0.00 6.53
5020 9190 1.156736 CCGCTATTTTCCATAGGCCG 58.843 55.000 0.00 0.00 0.00 6.13
5021 9191 0.881796 GCCGCTATTTTCCATAGGCC 59.118 55.000 0.00 0.00 37.32 5.19
5022 9192 0.517316 CGCCGCTATTTTCCATAGGC 59.483 55.000 0.00 0.00 39.68 3.93
5023 9193 1.156736 CCGCCGCTATTTTCCATAGG 58.843 55.000 0.00 0.00 0.00 2.57
5024 9194 1.156736 CCCGCCGCTATTTTCCATAG 58.843 55.000 0.00 0.00 0.00 2.23
5025 9195 0.887387 GCCCGCCGCTATTTTCCATA 60.887 55.000 0.00 0.00 0.00 2.74
5026 9196 2.193536 GCCCGCCGCTATTTTCCAT 61.194 57.895 0.00 0.00 0.00 3.41
5027 9197 2.826738 GCCCGCCGCTATTTTCCA 60.827 61.111 0.00 0.00 0.00 3.53
5028 9198 3.592814 GGCCCGCCGCTATTTTCC 61.593 66.667 0.00 0.00 37.74 3.13
5029 9199 2.516225 AGGCCCGCCGCTATTTTC 60.516 61.111 0.00 0.00 41.95 2.29
5030 9200 2.516225 GAGGCCCGCCGCTATTTT 60.516 61.111 0.00 0.00 41.95 1.82
5031 9201 4.564110 GGAGGCCCGCCGCTATTT 62.564 66.667 9.41 0.00 41.95 1.40
5037 9207 4.794648 TGATTTGGAGGCCCGCCG 62.795 66.667 0.00 0.00 41.95 6.46
5038 9208 2.830370 CTGATTTGGAGGCCCGCC 60.830 66.667 0.00 1.12 34.29 6.13
5039 9209 2.608970 TAGCTGATTTGGAGGCCCGC 62.609 60.000 0.00 0.00 34.29 6.13
5040 9210 0.109342 ATAGCTGATTTGGAGGCCCG 59.891 55.000 0.00 0.00 34.29 6.13
5041 9211 2.877708 GCTATAGCTGATTTGGAGGCCC 60.878 54.545 17.75 0.00 38.21 5.80
5042 9212 2.431454 GCTATAGCTGATTTGGAGGCC 58.569 52.381 17.75 0.00 38.21 5.19
5043 9213 2.072298 CGCTATAGCTGATTTGGAGGC 58.928 52.381 21.98 0.00 39.32 4.70
5044 9214 2.300152 TCCGCTATAGCTGATTTGGAGG 59.700 50.000 21.98 12.29 39.32 4.30
5045 9215 3.583806 CTCCGCTATAGCTGATTTGGAG 58.416 50.000 21.99 21.99 39.32 3.86
5046 9216 2.289072 GCTCCGCTATAGCTGATTTGGA 60.289 50.000 21.98 17.46 39.32 3.53
5047 9217 2.072298 GCTCCGCTATAGCTGATTTGG 58.928 52.381 21.98 14.32 39.32 3.28
5059 9229 2.341101 GCCCGCTATAGCTCCGCTA 61.341 63.158 21.98 0.00 45.55 4.26
5060 9230 2.766306 TAGCCCGCTATAGCTCCGCT 62.766 60.000 24.41 24.41 43.41 5.52
5061 9231 2.341101 TAGCCCGCTATAGCTCCGC 61.341 63.158 21.98 18.46 40.56 5.54
5062 9232 1.241990 TGTAGCCCGCTATAGCTCCG 61.242 60.000 21.98 10.15 40.56 4.63
5063 9233 0.528470 CTGTAGCCCGCTATAGCTCC 59.472 60.000 21.98 10.06 40.56 4.70
5067 9237 1.213013 CCGCTGTAGCCCGCTATAG 59.787 63.158 14.23 14.23 39.67 1.31
5068 9238 2.273179 CCCGCTGTAGCCCGCTATA 61.273 63.158 0.00 0.00 37.91 1.31
5069 9239 3.616721 CCCGCTGTAGCCCGCTAT 61.617 66.667 0.00 0.00 37.91 2.97
5073 9243 2.660258 AAATAGCCCGCTGTAGCCCG 62.660 60.000 0.00 0.00 37.91 6.13
5074 9244 1.148498 AAATAGCCCGCTGTAGCCC 59.852 57.895 0.00 0.00 37.91 5.19
5075 9245 0.463833 ACAAATAGCCCGCTGTAGCC 60.464 55.000 0.00 0.00 37.91 3.93
5076 9246 0.657840 CACAAATAGCCCGCTGTAGC 59.342 55.000 0.00 0.00 37.78 3.58
5077 9247 2.309528 TCACAAATAGCCCGCTGTAG 57.690 50.000 0.00 0.00 0.00 2.74
5078 9248 2.627945 CTTCACAAATAGCCCGCTGTA 58.372 47.619 0.00 0.00 0.00 2.74
5079 9249 1.453155 CTTCACAAATAGCCCGCTGT 58.547 50.000 0.00 0.00 0.00 4.40
5080 9250 0.734889 CCTTCACAAATAGCCCGCTG 59.265 55.000 0.00 0.00 0.00 5.18
5081 9251 1.032114 GCCTTCACAAATAGCCCGCT 61.032 55.000 0.00 0.00 0.00 5.52
5082 9252 1.433471 GCCTTCACAAATAGCCCGC 59.567 57.895 0.00 0.00 0.00 6.13
5083 9253 1.714899 CCGCCTTCACAAATAGCCCG 61.715 60.000 0.00 0.00 0.00 6.13
5084 9254 0.679960 ACCGCCTTCACAAATAGCCC 60.680 55.000 0.00 0.00 0.00 5.19
5085 9255 0.733150 GACCGCCTTCACAAATAGCC 59.267 55.000 0.00 0.00 0.00 3.93
5086 9256 1.448985 TGACCGCCTTCACAAATAGC 58.551 50.000 0.00 0.00 0.00 2.97
5087 9257 4.260784 GCTAATGACCGCCTTCACAAATAG 60.261 45.833 0.00 0.00 0.00 1.73
5088 9258 3.625764 GCTAATGACCGCCTTCACAAATA 59.374 43.478 0.00 0.00 0.00 1.40
5089 9259 2.423538 GCTAATGACCGCCTTCACAAAT 59.576 45.455 0.00 0.00 0.00 2.32
5090 9260 1.810151 GCTAATGACCGCCTTCACAAA 59.190 47.619 0.00 0.00 0.00 2.83
5091 9261 1.448985 GCTAATGACCGCCTTCACAA 58.551 50.000 0.00 0.00 0.00 3.33
5092 9262 0.739462 CGCTAATGACCGCCTTCACA 60.739 55.000 0.00 0.00 0.00 3.58
5093 9263 1.429148 CCGCTAATGACCGCCTTCAC 61.429 60.000 0.00 0.00 0.00 3.18
5094 9264 1.153449 CCGCTAATGACCGCCTTCA 60.153 57.895 0.00 0.00 0.00 3.02
5095 9265 2.534903 GCCGCTAATGACCGCCTTC 61.535 63.158 0.00 0.00 0.00 3.46
5096 9266 2.513897 GCCGCTAATGACCGCCTT 60.514 61.111 0.00 0.00 0.00 4.35
5097 9267 3.781307 TGCCGCTAATGACCGCCT 61.781 61.111 0.00 0.00 0.00 5.52
5098 9268 3.573491 GTGCCGCTAATGACCGCC 61.573 66.667 0.00 0.00 0.00 6.13
5099 9269 3.573491 GGTGCCGCTAATGACCGC 61.573 66.667 0.00 0.00 0.00 5.68
5100 9270 2.895372 GGGTGCCGCTAATGACCG 60.895 66.667 0.00 0.00 0.00 4.79
5101 9271 1.819632 CAGGGTGCCGCTAATGACC 60.820 63.158 0.00 0.00 0.00 4.02
5102 9272 2.472909 GCAGGGTGCCGCTAATGAC 61.473 63.158 0.00 0.00 37.42 3.06
5103 9273 2.124736 GCAGGGTGCCGCTAATGA 60.125 61.111 0.00 0.00 37.42 2.57
5104 9274 2.124570 AGCAGGGTGCCGCTAATG 60.125 61.111 0.00 0.00 46.52 1.90
5105 9275 2.124570 CAGCAGGGTGCCGCTAAT 60.125 61.111 0.00 0.00 46.52 1.73
5106 9276 2.404566 TTTCAGCAGGGTGCCGCTAA 62.405 55.000 0.00 0.00 46.52 3.09
5107 9277 2.404566 TTTTCAGCAGGGTGCCGCTA 62.405 55.000 0.00 0.00 46.52 4.26
5108 9278 3.790416 TTTTCAGCAGGGTGCCGCT 62.790 57.895 0.00 0.00 46.52 5.52
5109 9279 3.273080 CTTTTCAGCAGGGTGCCGC 62.273 63.158 0.00 0.00 46.52 6.53
5110 9280 2.629656 CCTTTTCAGCAGGGTGCCG 61.630 63.158 0.00 0.00 46.52 5.69
5111 9281 2.935740 GCCTTTTCAGCAGGGTGCC 61.936 63.158 0.00 0.00 46.52 5.01
5112 9282 0.609131 TAGCCTTTTCAGCAGGGTGC 60.609 55.000 2.17 0.00 42.32 5.01
5113 9283 2.134789 ATAGCCTTTTCAGCAGGGTG 57.865 50.000 2.17 0.00 42.32 4.61
5114 9284 2.422093 GCTATAGCCTTTTCAGCAGGGT 60.422 50.000 14.13 0.00 44.56 4.34
5115 9285 2.225467 GCTATAGCCTTTTCAGCAGGG 58.775 52.381 14.13 0.00 34.31 4.45
5116 9286 1.869767 CGCTATAGCCTTTTCAGCAGG 59.130 52.381 19.00 0.00 37.91 4.85
5117 9287 1.869767 CCGCTATAGCCTTTTCAGCAG 59.130 52.381 19.00 0.81 37.91 4.24
5118 9288 1.475034 CCCGCTATAGCCTTTTCAGCA 60.475 52.381 19.00 0.00 37.91 4.41
5119 9289 1.230324 CCCGCTATAGCCTTTTCAGC 58.770 55.000 19.00 0.00 37.91 4.26
5120 9290 1.202698 AGCCCGCTATAGCCTTTTCAG 60.203 52.381 19.00 2.99 37.91 3.02
5121 9291 0.837272 AGCCCGCTATAGCCTTTTCA 59.163 50.000 19.00 0.00 37.91 2.69
5122 9292 2.833631 TAGCCCGCTATAGCCTTTTC 57.166 50.000 19.00 4.36 37.91 2.29
5123 9293 4.473477 CTATAGCCCGCTATAGCCTTTT 57.527 45.455 23.85 5.54 46.26 2.27
5130 9300 1.676746 CTCCGCTATAGCCCGCTATA 58.323 55.000 19.00 14.20 39.65 1.31
5131 9301 1.668101 GCTCCGCTATAGCCCGCTAT 61.668 60.000 19.00 13.46 41.58 2.97
5132 9302 2.341101 GCTCCGCTATAGCCCGCTA 61.341 63.158 19.00 0.00 37.91 4.26
5133 9303 2.766306 TAGCTCCGCTATAGCCCGCT 62.766 60.000 24.41 24.41 41.02 5.52
5134 9304 2.341101 TAGCTCCGCTATAGCCCGC 61.341 63.158 19.00 17.12 41.02 6.13
5135 9305 3.998156 TAGCTCCGCTATAGCCCG 58.002 61.111 19.00 9.44 41.02 6.13
5142 9312 2.341101 GCCGGCTATAGCTCCGCTA 61.341 63.158 22.15 0.00 45.55 4.26
5143 9313 2.766306 TAGCCGGCTATAGCTCCGCT 62.766 60.000 32.24 25.87 44.01 5.52
5144 9314 1.668101 ATAGCCGGCTATAGCTCCGC 61.668 60.000 41.03 20.23 44.01 5.54
5145 9315 0.818296 AATAGCCGGCTATAGCTCCG 59.182 55.000 41.53 18.50 44.89 4.63
5146 9316 4.467198 TTAAATAGCCGGCTATAGCTCC 57.533 45.455 41.53 12.16 40.56 4.70
5147 9317 5.932883 AGTTTTAAATAGCCGGCTATAGCTC 59.067 40.000 41.53 28.58 40.56 4.09
5148 9318 5.866207 AGTTTTAAATAGCCGGCTATAGCT 58.134 37.500 41.53 30.55 43.20 3.32
5149 9319 7.548075 TCATAGTTTTAAATAGCCGGCTATAGC 59.452 37.037 41.53 29.09 38.20 2.97
5150 9320 8.997621 TCATAGTTTTAAATAGCCGGCTATAG 57.002 34.615 41.53 22.50 38.20 1.31
5151 9321 9.953565 AATCATAGTTTTAAATAGCCGGCTATA 57.046 29.630 41.53 28.18 38.20 1.31
5152 9322 8.863872 AATCATAGTTTTAAATAGCCGGCTAT 57.136 30.769 37.79 37.79 40.63 2.97
5153 9323 9.431887 CTAATCATAGTTTTAAATAGCCGGCTA 57.568 33.333 36.88 36.88 0.00 3.93
5154 9324 7.094762 GCTAATCATAGTTTTAAATAGCCGGCT 60.095 37.037 34.85 34.85 0.00 5.52
5155 9325 7.021790 GCTAATCATAGTTTTAAATAGCCGGC 58.978 38.462 21.89 21.89 0.00 6.13
5156 9326 8.094798 TGCTAATCATAGTTTTAAATAGCCGG 57.905 34.615 0.00 0.00 34.96 6.13
5157 9327 9.944663 TTTGCTAATCATAGTTTTAAATAGCCG 57.055 29.630 9.52 0.00 34.96 5.52
5167 9337 9.559958 CGAGTTTTCATTTGCTAATCATAGTTT 57.440 29.630 0.00 0.00 0.00 2.66
5168 9338 8.184192 CCGAGTTTTCATTTGCTAATCATAGTT 58.816 33.333 0.00 0.00 0.00 2.24
5169 9339 7.336931 ACCGAGTTTTCATTTGCTAATCATAGT 59.663 33.333 0.00 0.00 0.00 2.12
5170 9340 7.697691 ACCGAGTTTTCATTTGCTAATCATAG 58.302 34.615 0.00 0.00 0.00 2.23
5171 9341 7.552687 AGACCGAGTTTTCATTTGCTAATCATA 59.447 33.333 0.00 0.00 0.00 2.15
5172 9342 6.375455 AGACCGAGTTTTCATTTGCTAATCAT 59.625 34.615 0.00 0.00 0.00 2.45
5173 9343 5.705441 AGACCGAGTTTTCATTTGCTAATCA 59.295 36.000 0.00 0.00 0.00 2.57
5174 9344 6.024049 CAGACCGAGTTTTCATTTGCTAATC 58.976 40.000 0.00 0.00 0.00 1.75
5212 9386 5.189928 TCTGCCGGTAAATACAAATGACAT 58.810 37.500 1.90 0.00 0.00 3.06
5342 9516 4.171005 GCAGTGTGTGATGATGGAAATTG 58.829 43.478 0.00 0.00 0.00 2.32
5357 9532 3.370672 TCGTTGTATTAGCATGCAGTGTG 59.629 43.478 21.98 0.26 0.00 3.82
5380 9558 7.064371 CAGAATGAACTGTATTGAGAAGAGTGG 59.936 40.741 0.00 0.00 39.69 4.00
5544 9725 1.814429 TATGGACGGGTTGGATGGAT 58.186 50.000 0.00 0.00 0.00 3.41
5657 9838 4.495844 GGGTTAAATGCGACTTGCTGTATC 60.496 45.833 0.00 0.00 46.63 2.24
5706 9887 6.169094 CCTTTACTGTGTGATCATCTGAAGT 58.831 40.000 0.00 1.96 0.00 3.01
5801 9994 3.099905 CTCCAAGTCCCTCTATCACACA 58.900 50.000 0.00 0.00 0.00 3.72
5804 9997 6.732896 TTATTCTCCAAGTCCCTCTATCAC 57.267 41.667 0.00 0.00 0.00 3.06
5842 10037 7.443879 ACGAATTGCAATTAAAGGTTTTTGGAT 59.556 29.630 24.15 0.00 0.00 3.41
6212 10432 3.009363 TCCAGAAATGAACAGAGCCATCA 59.991 43.478 0.00 0.00 0.00 3.07
6284 10524 4.061357 TGTTAACTGACACATGTTCCGA 57.939 40.909 7.22 0.00 0.00 4.55
6286 10526 5.003804 AGGATGTTAACTGACACATGTTCC 58.996 41.667 7.22 0.00 33.62 3.62
6299 10546 9.561069 ACCATATTAAGTCATGAGGATGTTAAC 57.439 33.333 0.00 0.00 0.00 2.01
6417 10670 5.120053 CGTTTGAGCCTGTTTTTGTTTCTTT 59.880 36.000 0.00 0.00 0.00 2.52
6454 10707 4.497507 GGGTTGTGTGAGAGCAAAGTAAAC 60.498 45.833 0.00 0.00 0.00 2.01
6456 10709 3.211045 GGGTTGTGTGAGAGCAAAGTAA 58.789 45.455 0.00 0.00 0.00 2.24
6457 10710 2.171659 TGGGTTGTGTGAGAGCAAAGTA 59.828 45.455 0.00 0.00 0.00 2.24
6458 10711 1.064758 TGGGTTGTGTGAGAGCAAAGT 60.065 47.619 0.00 0.00 0.00 2.66
6459 10712 1.679139 TGGGTTGTGTGAGAGCAAAG 58.321 50.000 0.00 0.00 0.00 2.77
6460 10713 2.136298 TTGGGTTGTGTGAGAGCAAA 57.864 45.000 0.00 0.00 0.00 3.68
6462 10715 1.388547 GTTTGGGTTGTGTGAGAGCA 58.611 50.000 0.00 0.00 0.00 4.26
6463 10716 0.668535 GGTTTGGGTTGTGTGAGAGC 59.331 55.000 0.00 0.00 0.00 4.09
6465 10718 2.650322 GAAGGTTTGGGTTGTGTGAGA 58.350 47.619 0.00 0.00 0.00 3.27
6545 10806 6.017523 GGAAAAATATCAGTAAGGAGCAGAGC 60.018 42.308 0.00 0.00 0.00 4.09
6591 10856 1.696336 CAGCCTAGGTACCATGCAGAT 59.304 52.381 15.94 0.00 0.00 2.90
6602 10867 1.063567 ACGATTCTCTCCAGCCTAGGT 60.064 52.381 11.31 0.00 0.00 3.08
6693 10958 7.008447 TCCGTCAACAAAAGAAAACAAATAACG 59.992 33.333 0.00 0.00 0.00 3.18
6781 11141 7.655732 GGATTAGCCTAAAATTCACTCTCTCTC 59.344 40.741 0.00 0.00 0.00 3.20
6786 11146 6.825721 CAGTGGATTAGCCTAAAATTCACTCT 59.174 38.462 6.75 0.00 45.88 3.24
6789 11149 5.450550 GCCAGTGGATTAGCCTAAAATTCAC 60.451 44.000 15.20 0.00 41.35 3.18
6791 11151 4.889995 AGCCAGTGGATTAGCCTAAAATTC 59.110 41.667 15.20 0.00 37.63 2.17
6792 11152 4.871822 AGCCAGTGGATTAGCCTAAAATT 58.128 39.130 15.20 0.00 37.63 1.82
6793 11153 4.526438 AGCCAGTGGATTAGCCTAAAAT 57.474 40.909 15.20 0.00 37.63 1.82
6847 11207 7.296856 TGCCAATCCTTATTCCATCAGAATTA 58.703 34.615 0.00 0.00 42.86 1.40
6857 11217 5.343307 ACAACATTGCCAATCCTTATTCC 57.657 39.130 0.00 0.00 0.00 3.01
7062 11431 1.497991 TTGACACTGCGTACTCTTGC 58.502 50.000 0.00 0.00 0.00 4.01
7072 11441 1.108776 ATGGCCATGATTGACACTGC 58.891 50.000 20.04 0.00 0.00 4.40
7137 11524 4.144297 CCTGAAAGTTGTCCATTTCCTCA 58.856 43.478 0.00 0.00 35.08 3.86
7138 11525 3.057245 GCCTGAAAGTTGTCCATTTCCTC 60.057 47.826 0.00 0.00 35.08 3.71
7158 11546 0.108804 TCGATTGACCTCAGTTCGCC 60.109 55.000 5.35 0.00 35.04 5.54
7240 11629 6.393990 TGATGCGTGCCAAATACTAAAATTT 58.606 32.000 0.00 0.00 0.00 1.82
7241 11630 5.960113 TGATGCGTGCCAAATACTAAAATT 58.040 33.333 0.00 0.00 0.00 1.82
7264 11653 2.300433 GTTCACCAAAACGTAACCCCT 58.700 47.619 0.00 0.00 0.00 4.79
7266 11655 1.002576 CGGTTCACCAAAACGTAACCC 60.003 52.381 8.23 0.00 43.21 4.11
7273 11662 4.201930 TGTTGACATACGGTTCACCAAAAC 60.202 41.667 0.00 0.00 35.14 2.43
7286 11675 6.668541 AATCTGCAGTACATGTTGACATAC 57.331 37.500 14.67 0.00 34.26 2.39
7293 11682 5.296780 CCCGAATAAATCTGCAGTACATGTT 59.703 40.000 14.67 3.66 0.00 2.71
7296 11685 4.102524 TCCCCGAATAAATCTGCAGTACAT 59.897 41.667 14.67 0.00 0.00 2.29
7299 11688 4.974645 ATCCCCGAATAAATCTGCAGTA 57.025 40.909 14.67 0.00 0.00 2.74
7301 11690 6.824305 AATTATCCCCGAATAAATCTGCAG 57.176 37.500 7.63 7.63 0.00 4.41
7304 11693 7.661040 AGCAAAATTATCCCCGAATAAATCTG 58.339 34.615 0.00 0.00 0.00 2.90
7432 12192 4.830826 ATCGTGTCGACAGCTATGATTA 57.169 40.909 20.73 0.00 39.18 1.75
7434 12194 3.066760 TCAATCGTGTCGACAGCTATGAT 59.933 43.478 20.73 13.87 39.18 2.45
7435 12195 2.422127 TCAATCGTGTCGACAGCTATGA 59.578 45.455 20.73 17.68 39.18 2.15
7436 12196 2.531912 GTCAATCGTGTCGACAGCTATG 59.468 50.000 20.73 15.68 39.18 2.23
7437 12197 2.479730 GGTCAATCGTGTCGACAGCTAT 60.480 50.000 20.73 9.88 39.18 2.97
7438 12198 1.135489 GGTCAATCGTGTCGACAGCTA 60.135 52.381 20.73 7.73 39.18 3.32
7440 12200 0.666274 TGGTCAATCGTGTCGACAGC 60.666 55.000 20.73 12.87 39.18 4.40
7445 12205 2.182904 TCGTATGGTCAATCGTGTCG 57.817 50.000 0.00 0.00 0.00 4.35
7450 12222 7.464830 AAGTAAAAGATCGTATGGTCAATCG 57.535 36.000 0.00 0.00 0.00 3.34
7452 12224 9.273016 CCATAAGTAAAAGATCGTATGGTCAAT 57.727 33.333 0.00 0.00 39.50 2.57
7551 14506 4.883585 TGAAGTCTCTTGTGCTTGTTGAAT 59.116 37.500 0.00 0.00 0.00 2.57
7579 14544 5.782893 TTTGTCAGGATGGGTTTACAAAG 57.217 39.130 0.00 0.00 34.31 2.77
7669 14639 8.795842 TTTTCCCGTATCAACTTAATGTACAT 57.204 30.769 1.41 1.41 0.00 2.29
7670 14640 7.148373 GCTTTTCCCGTATCAACTTAATGTACA 60.148 37.037 0.00 0.00 0.00 2.90
7731 14702 4.215399 CGGCTAAAGTTCAGGTTGAAATGA 59.785 41.667 0.00 0.00 38.22 2.57
7847 14818 3.077556 CCCCCTACGACAGCTGCT 61.078 66.667 15.27 0.00 0.00 4.24
7911 14890 2.735772 ATCATCTGCTTCCGGCGGT 61.736 57.895 27.32 0.36 46.74 5.68
7919 14898 1.099879 GCTTCCGCCATCATCTGCTT 61.100 55.000 0.00 0.00 0.00 3.91
7933 14912 2.125350 CTGCTCCTGACCGCTTCC 60.125 66.667 0.00 0.00 0.00 3.46
8091 15148 8.715190 ATAAAGCCCTAGTTTCACCTTAAAAA 57.285 30.769 0.00 0.00 0.00 1.94
8092 15149 8.715190 AATAAAGCCCTAGTTTCACCTTAAAA 57.285 30.769 0.00 0.00 0.00 1.52
8093 15150 7.945664 TGAATAAAGCCCTAGTTTCACCTTAAA 59.054 33.333 0.00 0.00 0.00 1.52
8094 15151 7.463431 TGAATAAAGCCCTAGTTTCACCTTAA 58.537 34.615 0.00 0.00 0.00 1.85
8095 15152 7.023171 TGAATAAAGCCCTAGTTTCACCTTA 57.977 36.000 0.00 0.00 0.00 2.69
8096 15153 5.887754 TGAATAAAGCCCTAGTTTCACCTT 58.112 37.500 0.00 0.00 0.00 3.50
8097 15154 5.514500 TGAATAAAGCCCTAGTTTCACCT 57.486 39.130 0.00 0.00 0.00 4.00
8098 15155 5.885912 TGATGAATAAAGCCCTAGTTTCACC 59.114 40.000 0.00 0.00 0.00 4.02
8099 15156 7.251281 GTTGATGAATAAAGCCCTAGTTTCAC 58.749 38.462 0.00 0.00 0.00 3.18
8100 15157 6.377146 GGTTGATGAATAAAGCCCTAGTTTCA 59.623 38.462 0.00 0.00 0.00 2.69
8101 15158 6.377146 TGGTTGATGAATAAAGCCCTAGTTTC 59.623 38.462 0.00 0.00 0.00 2.78
8102 15159 6.252995 TGGTTGATGAATAAAGCCCTAGTTT 58.747 36.000 0.00 0.00 0.00 2.66
8103 15160 5.826643 TGGTTGATGAATAAAGCCCTAGTT 58.173 37.500 0.00 0.00 0.00 2.24
8104 15161 5.450818 TGGTTGATGAATAAAGCCCTAGT 57.549 39.130 0.00 0.00 0.00 2.57
8105 15162 6.773976 TTTGGTTGATGAATAAAGCCCTAG 57.226 37.500 0.00 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.