Multiple sequence alignment - TraesCS3D01G435700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G435700 chr3D 100.000 6145 0 0 1 6145 547908835 547914979 0.000000e+00 11348.0
1 TraesCS3D01G435700 chr3D 85.912 362 34 8 4587 4932 547926716 547927076 2.710000e-98 370.0
2 TraesCS3D01G435700 chr3D 86.559 186 19 2 835 1020 566431299 566431120 3.760000e-47 200.0
3 TraesCS3D01G435700 chr3D 89.796 98 10 0 6048 6145 547920744 547920647 6.470000e-25 126.0
4 TraesCS3D01G435700 chr3D 88.235 51 6 0 5500 5550 594366872 594366822 1.850000e-05 62.1
5 TraesCS3D01G435700 chr3D 100.000 31 0 0 5990 6020 121985532 121985562 2.390000e-04 58.4
6 TraesCS3D01G435700 chr3A 91.075 4549 272 55 1009 5480 684747777 684752268 0.000000e+00 6028.0
7 TraesCS3D01G435700 chr3A 88.330 437 37 10 5620 6056 684752790 684753212 4.250000e-141 512.0
8 TraesCS3D01G435700 chr3A 89.831 236 22 2 508 742 170387037 170386803 1.000000e-77 302.0
9 TraesCS3D01G435700 chr3A 88.584 219 23 2 508 726 170314027 170313811 1.310000e-66 265.0
10 TraesCS3D01G435700 chr3A 86.486 111 13 2 5056 5166 684756295 684756403 3.010000e-23 121.0
11 TraesCS3D01G435700 chr3A 95.714 70 2 1 5570 5639 684752534 684752602 1.810000e-20 111.0
12 TraesCS3D01G435700 chr3A 81.818 99 5 4 5247 5345 684756409 684756494 3.070000e-08 71.3
13 TraesCS3D01G435700 chr3A 100.000 30 0 0 5545 5574 727378538 727378567 8.600000e-04 56.5
14 TraesCS3D01G435700 chr3B 92.129 4040 232 46 1009 4991 725388244 725392254 0.000000e+00 5620.0
15 TraesCS3D01G435700 chr3B 88.270 682 44 13 5378 6055 725393879 725394528 0.000000e+00 784.0
16 TraesCS3D01G435700 chr3B 84.884 258 26 4 5118 5374 725392317 725392562 1.320000e-61 248.0
17 TraesCS3D01G435700 chr3B 86.239 218 29 1 501 717 394962498 394962281 1.030000e-57 235.0
18 TraesCS3D01G435700 chr3B 88.710 186 18 2 835 1020 394961615 394961433 2.230000e-54 224.0
19 TraesCS3D01G435700 chr3B 89.000 100 5 5 222 318 725388017 725388113 1.080000e-22 119.0
20 TraesCS3D01G435700 chr3B 94.595 37 1 1 5545 5580 525822209 525822173 8.600000e-04 56.5
21 TraesCS3D01G435700 chr6B 90.377 239 15 6 508 742 720745840 720745606 2.150000e-79 307.0
22 TraesCS3D01G435700 chr6B 100.000 30 0 0 5546 5575 300805011 300805040 8.600000e-04 56.5
23 TraesCS3D01G435700 chr6B 100.000 29 0 0 5998 6026 698096481 698096453 3.000000e-03 54.7
24 TraesCS3D01G435700 chr7A 89.831 236 22 2 508 742 671939591 671939357 1.000000e-77 302.0
25 TraesCS3D01G435700 chr7A 81.044 364 44 9 501 841 372744114 372743753 3.650000e-67 267.0
26 TraesCS3D01G435700 chr7A 85.714 182 18 2 839 1020 696502223 696502396 1.050000e-42 185.0
27 TraesCS3D01G435700 chr7A 90.909 44 4 0 5491 5534 166573472 166573515 6.650000e-05 60.2
28 TraesCS3D01G435700 chr6A 89.362 235 24 1 508 742 12435372 12435605 1.680000e-75 294.0
29 TraesCS3D01G435700 chr7B 81.148 366 43 15 501 841 642557044 642557408 2.820000e-68 270.0
30 TraesCS3D01G435700 chr7B 83.422 187 19 7 836 1020 678657075 678656899 4.930000e-36 163.0
31 TraesCS3D01G435700 chr7B 92.929 99 5 2 6048 6145 356729330 356729233 6.420000e-30 143.0
32 TraesCS3D01G435700 chr7B 90.909 44 4 0 5491 5534 6988594 6988637 6.650000e-05 60.2
33 TraesCS3D01G435700 chrUn 88.584 219 23 2 508 726 293322523 293322307 1.310000e-66 265.0
34 TraesCS3D01G435700 chr1B 85.484 186 22 3 835 1020 484271783 484271963 8.130000e-44 189.0
35 TraesCS3D01G435700 chr1B 94.253 87 4 1 6060 6145 104726022 104726108 1.390000e-26 132.0
36 TraesCS3D01G435700 chr1B 100.000 30 0 0 5546 5575 417631133 417631162 8.600000e-04 56.5
37 TraesCS3D01G435700 chr4B 86.471 170 17 4 851 1020 122848767 122848604 1.360000e-41 182.0
38 TraesCS3D01G435700 chr4B 84.043 94 10 3 510 599 260747044 260746952 1.100000e-12 86.1
39 TraesCS3D01G435700 chr4B 100.000 30 0 0 5546 5575 415542564 415542593 8.600000e-04 56.5
40 TraesCS3D01G435700 chr2A 84.127 189 24 6 835 1020 775369104 775368919 1.760000e-40 178.0
41 TraesCS3D01G435700 chr2A 93.103 87 6 0 6056 6142 752069146 752069060 1.800000e-25 128.0
42 TraesCS3D01G435700 chr4D 82.979 188 26 6 835 1020 312249239 312249422 1.370000e-36 165.0
43 TraesCS3D01G435700 chr4D 93.902 82 5 0 6063 6144 9721124 9721205 2.330000e-24 124.0
44 TraesCS3D01G435700 chr4D 87.755 49 5 1 5506 5553 487405655 487405703 8.600000e-04 56.5
45 TraesCS3D01G435700 chr5A 82.632 190 23 10 835 1020 63533614 63533431 6.380000e-35 159.0
46 TraesCS3D01G435700 chr5A 87.640 89 11 0 6056 6144 455959867 455959955 3.030000e-18 104.0
47 TraesCS3D01G435700 chr5A 88.000 50 4 2 5482 5531 691337277 691337324 2.390000e-04 58.4
48 TraesCS3D01G435700 chr6D 95.775 71 3 0 6074 6144 23527992 23528062 1.400000e-21 115.0
49 TraesCS3D01G435700 chr1A 89.888 89 9 0 6056 6144 417546296 417546384 1.400000e-21 115.0
50 TraesCS3D01G435700 chr5B 75.758 231 32 18 467 690 530186133 530185920 1.820000e-15 95.3
51 TraesCS3D01G435700 chr5B 100.000 31 0 0 5545 5575 637923708 637923738 2.390000e-04 58.4
52 TraesCS3D01G435700 chr5D 85.882 85 12 0 6059 6143 448606901 448606817 2.360000e-14 91.6
53 TraesCS3D01G435700 chr5D 85.135 74 4 5 5502 5568 41290432 41290359 1.110000e-07 69.4
54 TraesCS3D01G435700 chr4A 86.885 61 8 0 5487 5547 471931336 471931276 1.110000e-07 69.4
55 TraesCS3D01G435700 chr4A 100.000 30 0 0 5546 5575 467441136 467441107 8.600000e-04 56.5
56 TraesCS3D01G435700 chr2D 100.000 31 0 0 5996 6026 515600220 515600190 2.390000e-04 58.4
57 TraesCS3D01G435700 chr2B 96.875 32 1 0 5995 6026 771858330 771858361 3.000000e-03 54.7
58 TraesCS3D01G435700 chr7D 92.105 38 1 2 5989 6025 179054321 179054357 1.100000e-02 52.8
59 TraesCS3D01G435700 chr7D 100.000 28 0 0 5998 6025 406659612 406659585 1.100000e-02 52.8
60 TraesCS3D01G435700 chr7D 94.286 35 0 2 5993 6027 597680321 597680289 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G435700 chr3D 547908835 547914979 6144 False 11348.00 11348 100.00000 1 6145 1 chr3D.!!$F2 6144
1 TraesCS3D01G435700 chr3A 684747777 684756494 8717 False 1368.66 6028 88.68460 1009 6056 5 chr3A.!!$F2 5047
2 TraesCS3D01G435700 chr3B 725388017 725394528 6511 False 1692.75 5620 88.57075 222 6055 4 chr3B.!!$F1 5833
3 TraesCS3D01G435700 chr3B 394961433 394962498 1065 True 229.50 235 87.47450 501 1020 2 chr3B.!!$R2 519

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
63 64 0.035056 CCGGTGAATTGCCTTCCTCT 60.035 55.0 0.00 0.0 32.49 3.69 F
670 695 0.178068 GCTCGGCCTGATTTGAGGTA 59.822 55.0 0.00 0.0 35.29 3.08 F
1275 1301 0.326264 AGGGCTTCTTCGCTGACAAT 59.674 50.0 0.00 0.0 0.00 2.71 F
1521 1547 0.693049 ACAGATTCTTTGGCCTCGGT 59.307 50.0 3.32 0.0 0.00 4.69 F
3093 3231 0.804989 GACCAGCGTCAAGGAAATGG 59.195 55.0 0.00 0.0 38.99 3.16 F
4743 4898 0.109532 TCTTTCCATTGGCACGGTGA 59.890 50.0 13.29 0.0 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1004 1029 0.036952 TTGACAGTGGCAGAGCTAGC 60.037 55.0 6.62 6.62 0.00 3.42 R
1675 1705 1.210204 TGGCCTCCATTTGAGCCTCT 61.210 55.0 3.32 0.00 39.98 3.69 R
3080 3218 0.609131 ACCTGGCCATTTCCTTGACG 60.609 55.0 5.51 0.00 0.00 4.35 R
3434 3573 0.177836 CCCACATGCCAGTATCACGA 59.822 55.0 0.00 0.00 0.00 4.35 R
4993 5172 0.539438 TTTTGTCCTTCCCAGCGCAT 60.539 50.0 11.47 0.00 0.00 4.73 R
6075 7987 0.033781 CAACACTGCCCCAAATGTGG 59.966 55.0 0.00 0.00 45.53 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 3.915437 TTTTCCTGAGCGGTGAAATTC 57.085 42.857 0.00 0.00 0.00 2.17
41 42 2.859165 TTCCTGAGCGGTGAAATTCT 57.141 45.000 0.00 0.00 0.00 2.40
42 43 2.099141 TCCTGAGCGGTGAAATTCTG 57.901 50.000 0.00 0.00 0.00 3.02
43 44 1.623311 TCCTGAGCGGTGAAATTCTGA 59.377 47.619 0.00 0.00 0.00 3.27
44 45 1.734465 CCTGAGCGGTGAAATTCTGAC 59.266 52.381 0.00 0.00 0.00 3.51
45 46 1.734465 CTGAGCGGTGAAATTCTGACC 59.266 52.381 0.00 0.00 0.00 4.02
50 51 2.178912 GGTGAAATTCTGACCGGTGA 57.821 50.000 14.63 0.65 0.00 4.02
51 52 2.500229 GGTGAAATTCTGACCGGTGAA 58.500 47.619 14.63 11.47 0.00 3.18
52 53 3.081804 GGTGAAATTCTGACCGGTGAAT 58.918 45.455 14.63 13.61 34.75 2.57
53 54 3.506067 GGTGAAATTCTGACCGGTGAATT 59.494 43.478 21.30 21.30 42.52 2.17
54 55 4.475944 GTGAAATTCTGACCGGTGAATTG 58.524 43.478 25.37 3.34 40.64 2.32
55 56 3.057596 TGAAATTCTGACCGGTGAATTGC 60.058 43.478 25.37 24.12 40.64 3.56
56 57 1.463674 ATTCTGACCGGTGAATTGCC 58.536 50.000 14.63 0.00 29.63 4.52
57 58 0.400213 TTCTGACCGGTGAATTGCCT 59.600 50.000 14.63 0.00 0.00 4.75
58 59 0.400213 TCTGACCGGTGAATTGCCTT 59.600 50.000 14.63 0.00 0.00 4.35
59 60 0.804989 CTGACCGGTGAATTGCCTTC 59.195 55.000 14.63 0.00 0.00 3.46
60 61 0.608035 TGACCGGTGAATTGCCTTCC 60.608 55.000 14.63 0.00 32.49 3.46
61 62 0.322546 GACCGGTGAATTGCCTTCCT 60.323 55.000 14.63 0.00 32.49 3.36
62 63 0.322546 ACCGGTGAATTGCCTTCCTC 60.323 55.000 6.12 0.00 32.49 3.71
63 64 0.035056 CCGGTGAATTGCCTTCCTCT 60.035 55.000 0.00 0.00 32.49 3.69
64 65 1.089920 CGGTGAATTGCCTTCCTCTG 58.910 55.000 0.00 0.00 32.49 3.35
65 66 1.339055 CGGTGAATTGCCTTCCTCTGA 60.339 52.381 0.00 0.00 32.49 3.27
66 67 2.363683 GGTGAATTGCCTTCCTCTGAG 58.636 52.381 0.00 0.00 32.49 3.35
67 68 1.742268 GTGAATTGCCTTCCTCTGAGC 59.258 52.381 0.00 0.00 32.49 4.26
68 69 1.352017 TGAATTGCCTTCCTCTGAGCA 59.648 47.619 0.00 0.00 32.49 4.26
71 72 1.609208 TTGCCTTCCTCTGAGCAAAC 58.391 50.000 0.00 0.00 41.93 2.93
72 73 0.767375 TGCCTTCCTCTGAGCAAACT 59.233 50.000 0.00 0.00 30.97 2.66
73 74 1.977854 TGCCTTCCTCTGAGCAAACTA 59.022 47.619 0.00 0.00 30.97 2.24
74 75 2.027745 TGCCTTCCTCTGAGCAAACTAG 60.028 50.000 0.00 0.00 30.97 2.57
75 76 2.027653 GCCTTCCTCTGAGCAAACTAGT 60.028 50.000 0.00 0.00 0.00 2.57
76 77 3.558109 GCCTTCCTCTGAGCAAACTAGTT 60.558 47.826 1.12 1.12 0.00 2.24
77 78 4.646572 CCTTCCTCTGAGCAAACTAGTTT 58.353 43.478 15.22 15.22 0.00 2.66
78 79 5.066593 CCTTCCTCTGAGCAAACTAGTTTT 58.933 41.667 18.25 5.15 0.00 2.43
79 80 5.532779 CCTTCCTCTGAGCAAACTAGTTTTT 59.467 40.000 18.25 9.72 0.00 1.94
104 105 7.915293 TTTATTAGCGGTTCTGAGAAAATCA 57.085 32.000 0.00 0.00 36.21 2.57
115 116 4.842531 TGAGAAAATCAGATAGCCCACA 57.157 40.909 0.00 0.00 32.77 4.17
116 117 5.178096 TGAGAAAATCAGATAGCCCACAA 57.822 39.130 0.00 0.00 32.77 3.33
117 118 5.188434 TGAGAAAATCAGATAGCCCACAAG 58.812 41.667 0.00 0.00 32.77 3.16
118 119 4.530875 AGAAAATCAGATAGCCCACAAGG 58.469 43.478 0.00 0.00 39.47 3.61
119 120 4.018050 AGAAAATCAGATAGCCCACAAGGT 60.018 41.667 0.00 0.00 38.26 3.50
120 121 5.191722 AGAAAATCAGATAGCCCACAAGGTA 59.808 40.000 0.00 0.00 38.26 3.08
121 122 5.450818 AAATCAGATAGCCCACAAGGTAA 57.549 39.130 0.00 0.00 38.26 2.85
122 123 3.906720 TCAGATAGCCCACAAGGTAAC 57.093 47.619 0.00 0.00 38.26 2.50
151 152 2.101640 AAAAAGATGGCCCACAAGGT 57.898 45.000 0.00 0.00 38.26 3.50
152 153 2.990740 AAAAGATGGCCCACAAGGTA 57.009 45.000 0.00 0.00 38.26 3.08
153 154 2.990740 AAAGATGGCCCACAAGGTAA 57.009 45.000 0.00 0.00 38.26 2.85
154 155 2.990740 AAGATGGCCCACAAGGTAAA 57.009 45.000 0.00 0.00 38.26 2.01
155 156 2.215942 AGATGGCCCACAAGGTAAAC 57.784 50.000 0.00 0.00 38.26 2.01
156 157 1.427368 AGATGGCCCACAAGGTAAACA 59.573 47.619 0.00 0.00 38.26 2.83
157 158 1.544246 GATGGCCCACAAGGTAAACAC 59.456 52.381 0.00 0.00 38.26 3.32
158 159 0.259065 TGGCCCACAAGGTAAACACA 59.741 50.000 0.00 0.00 38.26 3.72
159 160 0.671796 GGCCCACAAGGTAAACACAC 59.328 55.000 0.00 0.00 38.26 3.82
160 161 0.671796 GCCCACAAGGTAAACACACC 59.328 55.000 0.00 0.00 38.26 4.16
170 171 2.876550 GGTAAACACACCTGACAAGTCC 59.123 50.000 0.00 0.00 35.55 3.85
171 172 2.052782 AAACACACCTGACAAGTCCC 57.947 50.000 0.00 0.00 0.00 4.46
172 173 0.182775 AACACACCTGACAAGTCCCC 59.817 55.000 0.00 0.00 0.00 4.81
173 174 0.694444 ACACACCTGACAAGTCCCCT 60.694 55.000 0.00 0.00 0.00 4.79
174 175 1.348064 CACACCTGACAAGTCCCCTA 58.652 55.000 0.00 0.00 0.00 3.53
175 176 1.002087 CACACCTGACAAGTCCCCTAC 59.998 57.143 0.00 0.00 0.00 3.18
176 177 1.132817 ACACCTGACAAGTCCCCTACT 60.133 52.381 0.00 0.00 41.49 2.57
178 179 2.372172 CACCTGACAAGTCCCCTACTTT 59.628 50.000 0.00 0.00 46.61 2.66
179 180 3.053826 ACCTGACAAGTCCCCTACTTTT 58.946 45.455 0.00 0.00 46.61 2.27
180 181 3.462205 ACCTGACAAGTCCCCTACTTTTT 59.538 43.478 0.00 0.00 46.61 1.94
248 249 3.650942 TGAGACAAATGTGTTCCCCTACT 59.349 43.478 0.00 0.00 38.41 2.57
249 250 4.841813 TGAGACAAATGTGTTCCCCTACTA 59.158 41.667 0.00 0.00 38.41 1.82
252 253 5.726793 AGACAAATGTGTTCCCCTACTAGAT 59.273 40.000 0.00 0.00 38.41 1.98
253 254 5.990668 ACAAATGTGTTCCCCTACTAGATC 58.009 41.667 0.00 0.00 32.58 2.75
289 290 1.271379 GCCCGACCCAAAAACTAAAGG 59.729 52.381 0.00 0.00 0.00 3.11
340 365 1.276421 CAGAGTCACCGAAGACCCATT 59.724 52.381 3.97 0.00 39.34 3.16
343 368 0.323629 GTCACCGAAGACCCATTGGA 59.676 55.000 3.62 0.00 34.81 3.53
357 382 2.290071 CCATTGGAACGACTAGTGGGTT 60.290 50.000 9.86 9.00 34.25 4.11
382 407 2.885861 CTAGCTTCACGACCCGCT 59.114 61.111 0.00 0.00 36.56 5.52
430 455 4.106925 GCAGGTAGGGCAGCAGCT 62.107 66.667 0.00 0.00 41.70 4.24
431 456 2.188994 CAGGTAGGGCAGCAGCTC 59.811 66.667 0.00 0.00 43.44 4.09
443 468 2.493973 CAGCTCTGCTCGAGACCC 59.506 66.667 18.75 0.00 42.62 4.46
444 469 2.051518 CAGCTCTGCTCGAGACCCT 61.052 63.158 18.75 1.04 42.62 4.34
445 470 1.304879 AGCTCTGCTCGAGACCCTT 60.305 57.895 18.75 0.00 42.62 3.95
446 471 0.902516 AGCTCTGCTCGAGACCCTTT 60.903 55.000 18.75 0.00 42.62 3.11
447 472 0.739112 GCTCTGCTCGAGACCCTTTG 60.739 60.000 18.75 0.00 42.62 2.77
448 473 0.739112 CTCTGCTCGAGACCCTTTGC 60.739 60.000 18.75 0.00 42.62 3.68
449 474 1.743252 CTGCTCGAGACCCTTTGCC 60.743 63.158 18.75 0.00 0.00 4.52
450 475 2.436824 GCTCGAGACCCTTTGCCC 60.437 66.667 18.75 0.00 0.00 5.36
451 476 2.125512 CTCGAGACCCTTTGCCCG 60.126 66.667 6.58 0.00 0.00 6.13
452 477 2.602267 TCGAGACCCTTTGCCCGA 60.602 61.111 0.00 0.00 0.00 5.14
453 478 2.434359 CGAGACCCTTTGCCCGAC 60.434 66.667 0.00 0.00 0.00 4.79
454 479 2.747686 GAGACCCTTTGCCCGACA 59.252 61.111 0.00 0.00 0.00 4.35
455 480 1.671379 GAGACCCTTTGCCCGACAC 60.671 63.158 0.00 0.00 0.00 3.67
456 481 2.671963 GACCCTTTGCCCGACACC 60.672 66.667 0.00 0.00 0.00 4.16
457 482 4.280019 ACCCTTTGCCCGACACCC 62.280 66.667 0.00 0.00 0.00 4.61
458 483 4.278513 CCCTTTGCCCGACACCCA 62.279 66.667 0.00 0.00 0.00 4.51
459 484 2.672996 CCTTTGCCCGACACCCAG 60.673 66.667 0.00 0.00 0.00 4.45
460 485 3.365265 CTTTGCCCGACACCCAGC 61.365 66.667 0.00 0.00 0.00 4.85
461 486 4.966787 TTTGCCCGACACCCAGCC 62.967 66.667 0.00 0.00 0.00 4.85
523 548 4.785453 GCTCCTGCCTCCCCGTTG 62.785 72.222 0.00 0.00 0.00 4.10
524 549 4.785453 CTCCTGCCTCCCCGTTGC 62.785 72.222 0.00 0.00 0.00 4.17
639 664 4.459089 GAGCCTCCCAGTCCGCAC 62.459 72.222 0.00 0.00 0.00 5.34
641 666 4.459089 GCCTCCCAGTCCGCACTC 62.459 72.222 0.00 0.00 0.00 3.51
642 667 3.775654 CCTCCCAGTCCGCACTCC 61.776 72.222 0.00 0.00 0.00 3.85
643 668 4.135153 CTCCCAGTCCGCACTCCG 62.135 72.222 0.00 0.00 0.00 4.63
667 692 3.819188 GGCTCGGCCTGATTTGAG 58.181 61.111 0.00 0.00 46.69 3.02
668 693 1.821332 GGCTCGGCCTGATTTGAGG 60.821 63.158 0.00 0.00 46.69 3.86
669 694 1.078143 GCTCGGCCTGATTTGAGGT 60.078 57.895 0.00 0.00 35.29 3.85
670 695 0.178068 GCTCGGCCTGATTTGAGGTA 59.822 55.000 0.00 0.00 35.29 3.08
671 696 1.202698 GCTCGGCCTGATTTGAGGTAT 60.203 52.381 0.00 0.00 35.29 2.73
672 697 2.760374 CTCGGCCTGATTTGAGGTATC 58.240 52.381 0.00 0.00 35.29 2.24
673 698 1.068588 TCGGCCTGATTTGAGGTATCG 59.931 52.381 0.00 0.00 35.29 2.92
674 699 1.202533 CGGCCTGATTTGAGGTATCGT 60.203 52.381 0.00 0.00 35.29 3.73
675 700 2.741878 CGGCCTGATTTGAGGTATCGTT 60.742 50.000 0.00 0.00 35.29 3.85
676 701 2.872858 GGCCTGATTTGAGGTATCGTTC 59.127 50.000 0.00 0.00 35.29 3.95
677 702 2.540101 GCCTGATTTGAGGTATCGTTCG 59.460 50.000 0.00 0.00 35.29 3.95
678 703 3.782046 CCTGATTTGAGGTATCGTTCGT 58.218 45.455 0.00 0.00 0.00 3.85
679 704 3.797256 CCTGATTTGAGGTATCGTTCGTC 59.203 47.826 0.00 0.00 0.00 4.20
680 705 3.777478 TGATTTGAGGTATCGTTCGTCC 58.223 45.455 0.00 0.00 0.00 4.79
681 706 3.193903 TGATTTGAGGTATCGTTCGTCCA 59.806 43.478 0.00 0.00 0.00 4.02
682 707 3.880047 TTTGAGGTATCGTTCGTCCAT 57.120 42.857 0.00 0.00 0.00 3.41
683 708 3.880047 TTGAGGTATCGTTCGTCCATT 57.120 42.857 0.00 0.00 0.00 3.16
684 709 3.431922 TGAGGTATCGTTCGTCCATTC 57.568 47.619 0.00 0.00 0.00 2.67
685 710 3.021695 TGAGGTATCGTTCGTCCATTCT 58.978 45.455 0.00 0.00 0.00 2.40
686 711 3.066342 TGAGGTATCGTTCGTCCATTCTC 59.934 47.826 0.00 0.00 0.00 2.87
687 712 2.361438 AGGTATCGTTCGTCCATTCTCC 59.639 50.000 0.00 0.00 0.00 3.71
688 713 2.100252 GGTATCGTTCGTCCATTCTCCA 59.900 50.000 0.00 0.00 0.00 3.86
689 714 3.429822 GGTATCGTTCGTCCATTCTCCAA 60.430 47.826 0.00 0.00 0.00 3.53
690 715 3.543680 ATCGTTCGTCCATTCTCCAAT 57.456 42.857 0.00 0.00 0.00 3.16
691 716 3.328382 TCGTTCGTCCATTCTCCAATT 57.672 42.857 0.00 0.00 0.00 2.32
692 717 3.259064 TCGTTCGTCCATTCTCCAATTC 58.741 45.455 0.00 0.00 0.00 2.17
693 718 2.351726 CGTTCGTCCATTCTCCAATTCC 59.648 50.000 0.00 0.00 0.00 3.01
694 719 3.610911 GTTCGTCCATTCTCCAATTCCT 58.389 45.455 0.00 0.00 0.00 3.36
695 720 3.543680 TCGTCCATTCTCCAATTCCTC 57.456 47.619 0.00 0.00 0.00 3.71
696 721 2.837591 TCGTCCATTCTCCAATTCCTCA 59.162 45.455 0.00 0.00 0.00 3.86
697 722 3.263170 TCGTCCATTCTCCAATTCCTCAA 59.737 43.478 0.00 0.00 0.00 3.02
698 723 4.080356 TCGTCCATTCTCCAATTCCTCAAT 60.080 41.667 0.00 0.00 0.00 2.57
699 724 4.036027 CGTCCATTCTCCAATTCCTCAATG 59.964 45.833 0.00 0.00 0.00 2.82
700 725 4.952335 GTCCATTCTCCAATTCCTCAATGT 59.048 41.667 0.00 0.00 0.00 2.71
701 726 5.420104 GTCCATTCTCCAATTCCTCAATGTT 59.580 40.000 0.00 0.00 0.00 2.71
702 727 6.018469 TCCATTCTCCAATTCCTCAATGTTT 58.982 36.000 0.00 0.00 0.00 2.83
703 728 6.071221 TCCATTCTCCAATTCCTCAATGTTTG 60.071 38.462 0.00 0.00 0.00 2.93
704 729 6.071221 CCATTCTCCAATTCCTCAATGTTTGA 60.071 38.462 0.00 0.00 38.17 2.69
705 730 7.364408 CCATTCTCCAATTCCTCAATGTTTGAT 60.364 37.037 0.00 0.00 39.30 2.57
706 731 6.764308 TCTCCAATTCCTCAATGTTTGATC 57.236 37.500 0.00 0.00 39.30 2.92
707 732 6.487828 TCTCCAATTCCTCAATGTTTGATCT 58.512 36.000 0.00 0.00 39.30 2.75
708 733 7.632861 TCTCCAATTCCTCAATGTTTGATCTA 58.367 34.615 0.00 0.00 39.30 1.98
709 734 7.772292 TCTCCAATTCCTCAATGTTTGATCTAG 59.228 37.037 0.00 0.00 39.30 2.43
710 735 6.830324 TCCAATTCCTCAATGTTTGATCTAGG 59.170 38.462 0.00 0.00 39.30 3.02
711 736 6.040166 CCAATTCCTCAATGTTTGATCTAGGG 59.960 42.308 0.00 0.00 39.30 3.53
712 737 5.779241 TTCCTCAATGTTTGATCTAGGGT 57.221 39.130 0.00 0.00 39.30 4.34
713 738 5.779241 TCCTCAATGTTTGATCTAGGGTT 57.221 39.130 0.00 0.00 39.30 4.11
714 739 6.139679 TCCTCAATGTTTGATCTAGGGTTT 57.860 37.500 0.00 0.00 39.30 3.27
715 740 5.945784 TCCTCAATGTTTGATCTAGGGTTTG 59.054 40.000 0.00 0.00 39.30 2.93
716 741 5.393461 CCTCAATGTTTGATCTAGGGTTTGC 60.393 44.000 0.00 0.00 39.30 3.68
717 742 4.155826 TCAATGTTTGATCTAGGGTTTGCG 59.844 41.667 0.00 0.00 34.08 4.85
718 743 3.134574 TGTTTGATCTAGGGTTTGCGT 57.865 42.857 0.00 0.00 0.00 5.24
719 744 2.811431 TGTTTGATCTAGGGTTTGCGTG 59.189 45.455 0.00 0.00 0.00 5.34
720 745 1.448985 TTGATCTAGGGTTTGCGTGC 58.551 50.000 0.00 0.00 0.00 5.34
721 746 0.613260 TGATCTAGGGTTTGCGTGCT 59.387 50.000 0.00 0.00 0.00 4.40
722 747 1.828595 TGATCTAGGGTTTGCGTGCTA 59.171 47.619 0.00 0.00 0.00 3.49
723 748 2.434336 TGATCTAGGGTTTGCGTGCTAT 59.566 45.455 0.00 0.00 0.00 2.97
724 749 3.118408 TGATCTAGGGTTTGCGTGCTATT 60.118 43.478 0.00 0.00 0.00 1.73
725 750 3.343941 TCTAGGGTTTGCGTGCTATTT 57.656 42.857 0.00 0.00 0.00 1.40
726 751 3.681593 TCTAGGGTTTGCGTGCTATTTT 58.318 40.909 0.00 0.00 0.00 1.82
727 752 4.076394 TCTAGGGTTTGCGTGCTATTTTT 58.924 39.130 0.00 0.00 0.00 1.94
747 772 2.780595 GTGTTGTGCACTGGACAGT 58.219 52.632 19.41 0.00 44.41 3.55
748 773 1.948104 GTGTTGTGCACTGGACAGTA 58.052 50.000 19.41 0.00 44.41 2.74
749 774 1.597663 GTGTTGTGCACTGGACAGTAC 59.402 52.381 19.41 0.00 44.41 2.73
750 775 1.208293 TGTTGTGCACTGGACAGTACA 59.792 47.619 19.41 2.78 40.20 2.90
751 776 2.285083 GTTGTGCACTGGACAGTACAA 58.715 47.619 19.41 13.82 40.20 2.41
752 777 2.878406 GTTGTGCACTGGACAGTACAAT 59.122 45.455 19.41 0.00 40.14 2.71
753 778 4.062293 GTTGTGCACTGGACAGTACAATA 58.938 43.478 19.41 5.75 40.14 1.90
754 779 3.659786 TGTGCACTGGACAGTACAATAC 58.340 45.455 19.41 2.90 40.20 1.89
755 780 3.070302 TGTGCACTGGACAGTACAATACA 59.930 43.478 19.41 5.08 40.20 2.29
756 781 4.253685 GTGCACTGGACAGTACAATACAT 58.746 43.478 10.32 0.00 40.20 2.29
757 782 4.093408 GTGCACTGGACAGTACAATACATG 59.907 45.833 10.32 0.00 40.20 3.21
758 783 4.020662 TGCACTGGACAGTACAATACATGA 60.021 41.667 4.41 0.00 40.20 3.07
759 784 4.935205 GCACTGGACAGTACAATACATGAA 59.065 41.667 4.41 0.00 40.20 2.57
760 785 5.163854 GCACTGGACAGTACAATACATGAAC 60.164 44.000 4.41 0.00 40.20 3.18
761 786 6.166279 CACTGGACAGTACAATACATGAACT 58.834 40.000 4.41 0.00 40.20 3.01
762 787 6.091305 CACTGGACAGTACAATACATGAACTG 59.909 42.308 4.41 5.73 40.20 3.16
763 788 6.014584 ACTGGACAGTACAATACATGAACTGA 60.015 38.462 2.58 0.00 40.43 3.41
764 789 6.946340 TGGACAGTACAATACATGAACTGAT 58.054 36.000 0.00 0.00 0.00 2.90
765 790 6.818142 TGGACAGTACAATACATGAACTGATG 59.182 38.462 0.00 0.00 0.00 3.07
766 791 7.041721 GGACAGTACAATACATGAACTGATGA 58.958 38.462 0.00 0.00 0.00 2.92
767 792 7.549134 GGACAGTACAATACATGAACTGATGAA 59.451 37.037 0.00 0.00 0.00 2.57
768 793 8.256611 ACAGTACAATACATGAACTGATGAAC 57.743 34.615 0.00 0.00 0.00 3.18
769 794 7.877612 ACAGTACAATACATGAACTGATGAACA 59.122 33.333 0.00 0.00 0.00 3.18
770 795 8.720562 CAGTACAATACATGAACTGATGAACAA 58.279 33.333 0.00 0.00 0.00 2.83
771 796 9.283768 AGTACAATACATGAACTGATGAACAAA 57.716 29.630 0.00 0.00 0.00 2.83
772 797 9.329913 GTACAATACATGAACTGATGAACAAAC 57.670 33.333 0.00 0.00 0.00 2.93
773 798 7.939782 ACAATACATGAACTGATGAACAAACA 58.060 30.769 0.00 0.00 0.00 2.83
774 799 7.862372 ACAATACATGAACTGATGAACAAACAC 59.138 33.333 0.00 0.00 0.00 3.32
775 800 4.847633 ACATGAACTGATGAACAAACACG 58.152 39.130 0.00 0.00 0.00 4.49
776 801 4.335315 ACATGAACTGATGAACAAACACGT 59.665 37.500 0.00 0.00 0.00 4.49
777 802 5.525745 ACATGAACTGATGAACAAACACGTA 59.474 36.000 0.00 0.00 0.00 3.57
778 803 6.037720 ACATGAACTGATGAACAAACACGTAA 59.962 34.615 0.00 0.00 0.00 3.18
779 804 6.612247 TGAACTGATGAACAAACACGTAAT 57.388 33.333 0.00 0.00 0.00 1.89
780 805 7.022055 TGAACTGATGAACAAACACGTAATT 57.978 32.000 0.00 0.00 0.00 1.40
781 806 8.144155 TGAACTGATGAACAAACACGTAATTA 57.856 30.769 0.00 0.00 0.00 1.40
782 807 8.613482 TGAACTGATGAACAAACACGTAATTAA 58.387 29.630 0.00 0.00 0.00 1.40
783 808 9.103048 GAACTGATGAACAAACACGTAATTAAG 57.897 33.333 0.00 0.00 0.00 1.85
784 809 7.075741 ACTGATGAACAAACACGTAATTAAGC 58.924 34.615 0.00 0.00 0.00 3.09
785 810 6.960468 TGATGAACAAACACGTAATTAAGCA 58.040 32.000 0.00 0.00 0.00 3.91
786 811 7.589395 TGATGAACAAACACGTAATTAAGCAT 58.411 30.769 0.00 0.00 0.00 3.79
787 812 8.722394 TGATGAACAAACACGTAATTAAGCATA 58.278 29.630 0.00 0.00 0.00 3.14
788 813 9.716507 GATGAACAAACACGTAATTAAGCATAT 57.283 29.630 0.00 0.00 0.00 1.78
847 872 9.368416 TGATTGATAGGAAGTACTATGTAAGCT 57.632 33.333 0.00 0.00 33.95 3.74
849 874 9.988815 ATTGATAGGAAGTACTATGTAAGCTTG 57.011 33.333 9.86 0.00 33.95 4.01
850 875 8.534954 TGATAGGAAGTACTATGTAAGCTTGT 57.465 34.615 9.86 0.00 33.95 3.16
851 876 8.978472 TGATAGGAAGTACTATGTAAGCTTGTT 58.022 33.333 9.86 0.00 33.95 2.83
852 877 9.819267 GATAGGAAGTACTATGTAAGCTTGTTT 57.181 33.333 9.86 0.00 33.95 2.83
857 882 9.704098 GAAGTACTATGTAAGCTTGTTTTATGC 57.296 33.333 9.86 0.00 0.00 3.14
858 883 8.786826 AGTACTATGTAAGCTTGTTTTATGCA 57.213 30.769 9.86 0.00 32.18 3.96
859 884 9.226606 AGTACTATGTAAGCTTGTTTTATGCAA 57.773 29.630 9.86 0.00 32.18 4.08
860 885 9.834628 GTACTATGTAAGCTTGTTTTATGCAAA 57.165 29.630 9.86 0.00 32.18 3.68
873 898 7.985634 GTTTTATGCAAAACTGAGACTTGAA 57.014 32.000 6.73 0.00 46.61 2.69
874 899 8.579682 GTTTTATGCAAAACTGAGACTTGAAT 57.420 30.769 6.73 1.10 46.61 2.57
875 900 8.482429 GTTTTATGCAAAACTGAGACTTGAATG 58.518 33.333 6.73 0.00 46.61 2.67
876 901 7.509141 TTATGCAAAACTGAGACTTGAATGA 57.491 32.000 0.00 0.00 0.00 2.57
877 902 5.428496 TGCAAAACTGAGACTTGAATGAG 57.572 39.130 3.17 0.00 0.00 2.90
878 903 5.125356 TGCAAAACTGAGACTTGAATGAGA 58.875 37.500 3.17 0.00 0.00 3.27
879 904 5.589855 TGCAAAACTGAGACTTGAATGAGAA 59.410 36.000 3.17 0.00 0.00 2.87
880 905 6.263842 TGCAAAACTGAGACTTGAATGAGAAT 59.736 34.615 3.17 0.00 0.00 2.40
881 906 7.144000 GCAAAACTGAGACTTGAATGAGAATT 58.856 34.615 3.17 0.00 0.00 2.17
882 907 7.650903 GCAAAACTGAGACTTGAATGAGAATTT 59.349 33.333 3.17 0.00 0.00 1.82
883 908 9.525409 CAAAACTGAGACTTGAATGAGAATTTT 57.475 29.630 0.00 0.00 0.00 1.82
886 911 9.566432 AACTGAGACTTGAATGAGAATTTTAGT 57.434 29.630 0.00 0.00 0.00 2.24
887 912 8.997323 ACTGAGACTTGAATGAGAATTTTAGTG 58.003 33.333 0.00 0.00 0.00 2.74
888 913 8.908786 TGAGACTTGAATGAGAATTTTAGTGT 57.091 30.769 0.00 0.00 0.00 3.55
889 914 8.777413 TGAGACTTGAATGAGAATTTTAGTGTG 58.223 33.333 0.00 0.00 0.00 3.82
890 915 8.682936 AGACTTGAATGAGAATTTTAGTGTGT 57.317 30.769 0.00 0.00 0.00 3.72
891 916 9.125026 AGACTTGAATGAGAATTTTAGTGTGTT 57.875 29.630 0.00 0.00 0.00 3.32
892 917 9.736023 GACTTGAATGAGAATTTTAGTGTGTTT 57.264 29.630 0.00 0.00 0.00 2.83
893 918 9.520204 ACTTGAATGAGAATTTTAGTGTGTTTG 57.480 29.630 0.00 0.00 0.00 2.93
894 919 9.520204 CTTGAATGAGAATTTTAGTGTGTTTGT 57.480 29.630 0.00 0.00 0.00 2.83
900 925 8.617809 TGAGAATTTTAGTGTGTTTGTAAGACC 58.382 33.333 0.00 0.00 0.00 3.85
901 926 8.514330 AGAATTTTAGTGTGTTTGTAAGACCA 57.486 30.769 0.00 0.00 0.00 4.02
902 927 9.131791 AGAATTTTAGTGTGTTTGTAAGACCAT 57.868 29.630 0.00 0.00 0.00 3.55
907 932 9.562408 TTTAGTGTGTTTGTAAGACCATATTGA 57.438 29.630 0.00 0.00 0.00 2.57
908 933 9.733556 TTAGTGTGTTTGTAAGACCATATTGAT 57.266 29.630 0.00 0.00 0.00 2.57
909 934 8.268850 AGTGTGTTTGTAAGACCATATTGATC 57.731 34.615 0.00 0.00 0.00 2.92
910 935 8.103305 AGTGTGTTTGTAAGACCATATTGATCT 58.897 33.333 0.00 0.00 0.00 2.75
911 936 9.378551 GTGTGTTTGTAAGACCATATTGATCTA 57.621 33.333 0.00 0.00 0.00 1.98
920 945 8.915057 AAGACCATATTGATCTATTTCTGTGG 57.085 34.615 0.00 0.00 0.00 4.17
921 946 8.038862 AGACCATATTGATCTATTTCTGTGGT 57.961 34.615 0.00 0.00 38.81 4.16
922 947 9.159254 AGACCATATTGATCTATTTCTGTGGTA 57.841 33.333 0.00 0.00 36.45 3.25
923 948 9.950496 GACCATATTGATCTATTTCTGTGGTAT 57.050 33.333 0.00 0.00 36.45 2.73
928 953 7.936496 TTGATCTATTTCTGTGGTATTTGCA 57.064 32.000 0.00 0.00 0.00 4.08
929 954 7.936496 TGATCTATTTCTGTGGTATTTGCAA 57.064 32.000 0.00 0.00 0.00 4.08
930 955 8.523915 TGATCTATTTCTGTGGTATTTGCAAT 57.476 30.769 0.00 0.00 0.00 3.56
931 956 8.970020 TGATCTATTTCTGTGGTATTTGCAATT 58.030 29.630 0.00 0.00 0.00 2.32
934 959 9.461312 TCTATTTCTGTGGTATTTGCAATTAGT 57.539 29.630 0.00 0.00 0.00 2.24
942 967 9.988815 TGTGGTATTTGCAATTAGTTAAAATGT 57.011 25.926 0.00 0.00 0.00 2.71
985 1010 9.632807 TTGTCAAAAATAAATAAATGGAGACGG 57.367 29.630 0.00 0.00 0.00 4.79
986 1011 9.015367 TGTCAAAAATAAATAAATGGAGACGGA 57.985 29.630 0.00 0.00 0.00 4.69
987 1012 9.285770 GTCAAAAATAAATAAATGGAGACGGAC 57.714 33.333 0.00 0.00 0.00 4.79
988 1013 8.463607 TCAAAAATAAATAAATGGAGACGGACC 58.536 33.333 0.00 0.00 0.00 4.46
989 1014 7.948034 AAAATAAATAAATGGAGACGGACCA 57.052 32.000 0.00 0.00 41.83 4.02
990 1015 6.937436 AATAAATAAATGGAGACGGACCAC 57.063 37.500 0.00 0.00 40.36 4.16
991 1016 3.277142 AATAAATGGAGACGGACCACC 57.723 47.619 0.00 0.00 40.36 4.61
992 1017 0.906775 TAAATGGAGACGGACCACCC 59.093 55.000 0.00 0.00 40.36 4.61
993 1018 0.840722 AAATGGAGACGGACCACCCT 60.841 55.000 0.00 0.00 40.36 4.34
994 1019 1.553690 AATGGAGACGGACCACCCTG 61.554 60.000 0.00 0.00 40.36 4.45
995 1020 2.603776 GGAGACGGACCACCCTGT 60.604 66.667 0.00 0.00 0.00 4.00
996 1021 2.214920 GGAGACGGACCACCCTGTT 61.215 63.158 0.00 0.00 0.00 3.16
997 1022 0.901580 GGAGACGGACCACCCTGTTA 60.902 60.000 0.00 0.00 0.00 2.41
998 1023 1.192428 GAGACGGACCACCCTGTTAT 58.808 55.000 0.00 0.00 0.00 1.89
999 1024 1.136500 GAGACGGACCACCCTGTTATC 59.864 57.143 0.00 0.00 0.00 1.75
1000 1025 0.899720 GACGGACCACCCTGTTATCA 59.100 55.000 0.00 0.00 0.00 2.15
1001 1026 1.276989 GACGGACCACCCTGTTATCAA 59.723 52.381 0.00 0.00 0.00 2.57
1002 1027 1.700739 ACGGACCACCCTGTTATCAAA 59.299 47.619 0.00 0.00 0.00 2.69
1003 1028 2.307686 ACGGACCACCCTGTTATCAAAT 59.692 45.455 0.00 0.00 0.00 2.32
1004 1029 2.682856 CGGACCACCCTGTTATCAAATG 59.317 50.000 0.00 0.00 0.00 2.32
1005 1030 2.427095 GGACCACCCTGTTATCAAATGC 59.573 50.000 0.00 0.00 0.00 3.56
1006 1031 3.356290 GACCACCCTGTTATCAAATGCT 58.644 45.455 0.00 0.00 0.00 3.79
1007 1032 4.523083 GACCACCCTGTTATCAAATGCTA 58.477 43.478 0.00 0.00 0.00 3.49
1008 1033 4.526970 ACCACCCTGTTATCAAATGCTAG 58.473 43.478 0.00 0.00 0.00 3.42
1009 1034 3.316308 CCACCCTGTTATCAAATGCTAGC 59.684 47.826 8.10 8.10 0.00 3.42
1010 1035 4.202441 CACCCTGTTATCAAATGCTAGCT 58.798 43.478 17.23 0.00 0.00 3.32
1011 1036 4.274459 CACCCTGTTATCAAATGCTAGCTC 59.726 45.833 17.23 0.00 0.00 4.09
1012 1037 4.164988 ACCCTGTTATCAAATGCTAGCTCT 59.835 41.667 17.23 0.00 0.00 4.09
1013 1038 4.514441 CCCTGTTATCAAATGCTAGCTCTG 59.486 45.833 17.23 10.30 0.00 3.35
1016 1041 2.723322 ATCAAATGCTAGCTCTGCCA 57.277 45.000 17.23 0.00 0.00 4.92
1046 1071 1.621672 CCAACTCCCAGCCTCCTCTC 61.622 65.000 0.00 0.00 0.00 3.20
1048 1073 1.820866 AACTCCCAGCCTCCTCTCCT 61.821 60.000 0.00 0.00 0.00 3.69
1050 1075 2.235602 CTCCCAGCCTCCTCTCCTGA 62.236 65.000 0.00 0.00 0.00 3.86
1098 1124 0.704076 CTTGGTTGGGAGGATTGGGA 59.296 55.000 0.00 0.00 0.00 4.37
1269 1295 2.665603 GTCCAGGGCTTCTTCGCT 59.334 61.111 0.00 0.00 0.00 4.93
1275 1301 0.326264 AGGGCTTCTTCGCTGACAAT 59.674 50.000 0.00 0.00 0.00 2.71
1378 1404 8.727100 TCCTCTTAATCATCCTATTTAGCAGA 57.273 34.615 0.00 0.00 0.00 4.26
1465 1491 1.602605 CGCCTTTTTCCCGGGAAGT 60.603 57.895 33.64 0.00 35.38 3.01
1499 1525 2.101640 TGAGCTCCTGGTATGGCATA 57.898 50.000 12.15 2.32 0.00 3.14
1518 1544 2.206576 ACCACAGATTCTTTGGCCTC 57.793 50.000 17.05 0.00 33.25 4.70
1521 1547 0.693049 ACAGATTCTTTGGCCTCGGT 59.307 50.000 3.32 0.00 0.00 4.69
1522 1548 1.073923 ACAGATTCTTTGGCCTCGGTT 59.926 47.619 3.32 0.00 0.00 4.44
1524 1550 1.095600 GATTCTTTGGCCTCGGTTCC 58.904 55.000 3.32 0.00 0.00 3.62
1527 1553 1.377333 CTTTGGCCTCGGTTCCTCC 60.377 63.158 3.32 0.00 0.00 4.30
1534 1564 3.316573 CTCGGTTCCTCCACCTGCC 62.317 68.421 0.00 0.00 34.22 4.85
1535 1565 4.760047 CGGTTCCTCCACCTGCCG 62.760 72.222 0.00 0.00 34.22 5.69
1568 1598 2.412847 GGCGACTTTAACATGTGTGCTC 60.413 50.000 0.00 0.00 0.00 4.26
1569 1599 2.721797 GCGACTTTAACATGTGTGCTCG 60.722 50.000 0.00 4.05 0.00 5.03
1570 1600 2.475111 CGACTTTAACATGTGTGCTCGT 59.525 45.455 0.00 0.00 0.00 4.18
1571 1601 3.661678 CGACTTTAACATGTGTGCTCGTG 60.662 47.826 0.00 0.00 0.00 4.35
1591 1621 1.864082 GATTTTGTTTGGGTTGTGCCG 59.136 47.619 0.00 0.00 38.44 5.69
1630 1660 1.597742 GGTACTACGCGGATAGGTCA 58.402 55.000 12.47 0.00 0.00 4.02
1675 1705 2.752030 CACAGGAGAGGGATGGAGTTA 58.248 52.381 0.00 0.00 0.00 2.24
1775 1805 1.878975 GCTTCGGTAAGGCTCTCGC 60.879 63.158 0.00 0.00 32.98 5.03
1841 1874 5.326200 TCAGCTAAGTAAGAGGTTACTGC 57.674 43.478 0.00 0.19 46.88 4.40
1871 1904 4.447138 TTTGGTTGAGGTCACTGGTAAT 57.553 40.909 0.00 0.00 0.00 1.89
1878 1911 3.396276 TGAGGTCACTGGTAATGGGAAAA 59.604 43.478 0.00 0.00 0.00 2.29
1890 1923 8.305046 TGGTAATGGGAAAAGGAAATTGATAG 57.695 34.615 0.00 0.00 0.00 2.08
1930 1963 2.159000 TGCTGACATATGGACTCTGCAG 60.159 50.000 17.07 7.63 34.92 4.41
1973 2006 7.749570 GCATGCAGATTAAGCTATAACATCTTG 59.250 37.037 14.21 0.00 0.00 3.02
1983 2016 6.605119 AGCTATAACATCTTGGCCTTGTTAT 58.395 36.000 24.14 24.14 44.49 1.89
1991 2024 8.133024 ACATCTTGGCCTTGTTATATTGAAAA 57.867 30.769 3.32 0.00 0.00 2.29
1998 2031 6.378848 GGCCTTGTTATATTGAAAACTGGGTA 59.621 38.462 0.00 0.00 0.00 3.69
2008 2041 5.828299 TGAAAACTGGGTACTTCTTGTTG 57.172 39.130 0.00 0.00 0.00 3.33
2076 2109 6.482308 CCTTCTATATAAAAAGGGTGTGGTCG 59.518 42.308 12.75 0.00 36.68 4.79
2079 2112 8.253867 TCTATATAAAAAGGGTGTGGTCGTAT 57.746 34.615 0.00 0.00 0.00 3.06
2096 2136 9.903682 GTGGTCGTATTATACATACTACATTGT 57.096 33.333 12.87 0.00 30.89 2.71
2135 2175 3.915437 TTTTGGCTCCGAACTGAATTC 57.085 42.857 0.00 0.00 0.00 2.17
2212 2258 8.768397 TGATAACTATTCTCATGTTGGTACCTT 58.232 33.333 14.36 0.00 0.00 3.50
2214 2260 7.687941 AACTATTCTCATGTTGGTACCTTTG 57.312 36.000 14.36 5.61 0.00 2.77
2231 2277 7.225145 GGTACCTTTGGTTTAATTGTTGGTTTC 59.775 37.037 4.06 0.00 37.09 2.78
2233 2279 6.043411 CCTTTGGTTTAATTGTTGGTTTCGA 58.957 36.000 0.00 0.00 0.00 3.71
2240 2286 7.436970 GGTTTAATTGTTGGTTTCGATTCTGTT 59.563 33.333 0.00 0.00 0.00 3.16
2390 2436 8.494016 AGCTTTCGTTTATTTAGCTACTGATT 57.506 30.769 0.00 0.00 40.19 2.57
2397 2443 7.370836 CGTTTATTTAGCTACTGATTTTCTGCG 59.629 37.037 0.00 0.00 0.00 5.18
2405 2451 3.330267 ACTGATTTTCTGCGTCCTTCTC 58.670 45.455 0.00 0.00 0.00 2.87
2425 2471 5.371526 TCTCATCTTCAGAATGTATTGGCC 58.628 41.667 0.00 0.00 37.40 5.36
2437 2483 7.502226 CAGAATGTATTGGCCCTTTCTGTTATA 59.498 37.037 19.00 0.00 37.74 0.98
2448 2494 7.942894 GGCCCTTTCTGTTATATTAGTATGGTT 59.057 37.037 0.00 0.00 0.00 3.67
2449 2495 9.350951 GCCCTTTCTGTTATATTAGTATGGTTT 57.649 33.333 0.00 0.00 0.00 3.27
2485 2531 4.968259 TGTTGTAGTTGTATTGACAGGCT 58.032 39.130 0.00 0.00 36.76 4.58
2526 2573 6.780031 TCCTTGGGTTCAGATTCAAATTTACA 59.220 34.615 0.00 0.00 0.00 2.41
2593 2645 6.115446 TGAATTGGCAAGGTCTAGAGTAATG 58.885 40.000 5.96 0.00 0.00 1.90
2666 2722 7.709947 TGGCTGAGCATTATATCTTTTTCTTG 58.290 34.615 6.82 0.00 0.00 3.02
2718 2774 4.954875 AGGCTATCTTGTTATGCTGAGAC 58.045 43.478 0.00 0.00 0.00 3.36
2973 3111 4.366586 GACGATGAAGATGAAGATGCTGA 58.633 43.478 0.00 0.00 0.00 4.26
2998 3136 3.425162 AGTGAGGATGGTGAGGAAAAC 57.575 47.619 0.00 0.00 0.00 2.43
3016 3154 5.335113 GGAAAACGGGGACACATTAAGTTAC 60.335 44.000 0.00 0.00 0.00 2.50
3093 3231 0.804989 GACCAGCGTCAAGGAAATGG 59.195 55.000 0.00 0.00 38.99 3.16
3114 3252 2.095059 GCCAGGTATCTTTGTGCTTGTG 60.095 50.000 0.00 0.00 0.00 3.33
3135 3274 7.686438 TGTGTAGCTGACATGACATAATTTT 57.314 32.000 0.00 0.00 41.14 1.82
3290 3429 7.698130 CCGTAAGCTCATTATTCCTTTTTCAAG 59.302 37.037 0.00 0.00 0.00 3.02
3432 3571 6.808829 TCACTTAGAAAAGGTTAGTCGTGAA 58.191 36.000 0.00 0.00 37.01 3.18
3433 3572 6.698766 TCACTTAGAAAAGGTTAGTCGTGAAC 59.301 38.462 0.00 0.00 37.01 3.18
3434 3573 6.700520 CACTTAGAAAAGGTTAGTCGTGAACT 59.299 38.462 0.00 0.00 38.30 3.01
3435 3574 6.922407 ACTTAGAAAAGGTTAGTCGTGAACTC 59.078 38.462 0.00 0.00 36.91 3.01
3436 3575 4.296690 AGAAAAGGTTAGTCGTGAACTCG 58.703 43.478 0.00 0.00 39.55 4.18
3437 3576 3.722728 AAAGGTTAGTCGTGAACTCGT 57.277 42.857 0.00 0.00 39.55 4.18
3438 3577 2.701073 AGGTTAGTCGTGAACTCGTG 57.299 50.000 0.00 0.00 39.55 4.35
3439 3578 2.224606 AGGTTAGTCGTGAACTCGTGA 58.775 47.619 0.00 0.00 39.55 4.35
3482 3621 8.819845 ACCATACTGATGATGTGTACATGATAT 58.180 33.333 0.00 0.00 36.57 1.63
3542 3682 7.358683 GCTGCTTTTATTGTCATCTTGTTTGTC 60.359 37.037 0.00 0.00 0.00 3.18
3812 3955 4.841422 TGGCCCATTTTATTCCAACATTG 58.159 39.130 0.00 0.00 0.00 2.82
3839 3982 4.641541 TCATCATTCCTTGCCTGTGTAATG 59.358 41.667 0.00 0.00 0.00 1.90
3946 4098 4.584874 TGTCAGTCTTTTTGGTCACTGAA 58.415 39.130 2.29 0.00 45.23 3.02
4318 4470 8.709386 AGTTCTTCTGCATGTATTAGTAGTTG 57.291 34.615 0.00 0.00 0.00 3.16
4326 4478 8.402326 TGCATGTATTAGTAGTTGAAGTTACG 57.598 34.615 0.00 0.00 0.00 3.18
4406 4558 1.293062 ATCAGGCACCATTCTGGAGT 58.707 50.000 0.00 0.00 40.96 3.85
4567 4720 2.674796 AGGTCATTTGCTCGTACTCC 57.325 50.000 0.00 0.00 0.00 3.85
4601 4755 6.308766 GTGACATACACCTTTTGAATTGCATC 59.691 38.462 0.00 0.00 43.05 3.91
4614 4769 4.458989 TGAATTGCATCTCACCCTGTTTAC 59.541 41.667 0.00 0.00 0.00 2.01
4619 4774 0.971386 TCTCACCCTGTTTACGTCCC 59.029 55.000 0.00 0.00 0.00 4.46
4739 4894 3.574284 TTGAATCTTTCCATTGGCACG 57.426 42.857 0.00 0.00 0.00 5.34
4743 4898 0.109532 TCTTTCCATTGGCACGGTGA 59.890 50.000 13.29 0.00 0.00 4.02
4745 4900 1.523154 TTTCCATTGGCACGGTGAGC 61.523 55.000 13.29 0.00 0.00 4.26
4771 4926 8.005192 TGCGCATCTATATTTATCTGATCTCT 57.995 34.615 5.66 0.00 0.00 3.10
4820 4987 1.701847 TCTGCTTCTTCTTCAAGGCCT 59.298 47.619 0.00 0.00 0.00 5.19
4862 5029 0.617820 AGGGAGGGCGTTGAGTATGT 60.618 55.000 0.00 0.00 0.00 2.29
4866 5033 0.456221 AGGGCGTTGAGTATGTCTCG 59.544 55.000 0.00 0.00 45.46 4.04
4868 5035 1.546834 GGCGTTGAGTATGTCTCGTC 58.453 55.000 0.00 0.00 45.46 4.20
4886 5056 5.007430 TCTCGTCGACAATAGGATTACAGAC 59.993 44.000 17.16 0.00 0.00 3.51
4978 5156 2.203437 GCAGTTTGGACGGGGGTT 60.203 61.111 0.00 0.00 0.00 4.11
4993 5172 3.028130 GGGGGTTCTTTGAGTTTGTCAA 58.972 45.455 0.00 0.00 43.82 3.18
4998 5177 2.998772 TCTTTGAGTTTGTCAATGCGC 58.001 42.857 0.00 0.00 44.89 6.09
4999 5178 2.618241 TCTTTGAGTTTGTCAATGCGCT 59.382 40.909 9.73 0.00 44.89 5.92
5010 5189 1.074775 AATGCGCTGGGAAGGACAA 59.925 52.632 9.73 0.00 0.00 3.18
5026 5205 3.706086 AGGACAAAAGTGTTGGCATTCTT 59.294 39.130 0.15 0.00 38.41 2.52
5036 5215 5.418524 AGTGTTGGCATTCTTAATGTATGCA 59.581 36.000 14.61 0.00 46.81 3.96
5040 5219 5.893687 TGGCATTCTTAATGTATGCAACTG 58.106 37.500 14.61 0.00 46.81 3.16
5069 5248 4.352595 TCAACTTTGATCCTGGGTCCTTTA 59.647 41.667 4.13 0.00 31.01 1.85
5102 5281 0.458370 GGTGGAATGGTTTGATGCGC 60.458 55.000 0.00 0.00 0.00 6.09
5142 5321 6.034790 CACGCAATATGCTTAGAAATGCAAAA 59.965 34.615 0.00 0.00 42.25 2.44
5232 5412 9.990868 ATTGGTTAAATCTGGGACTAATTAAGT 57.009 29.630 0.00 0.00 42.80 2.24
5260 5443 8.792830 TTGTTAAGAGGTAGGAAATGAATCAG 57.207 34.615 0.00 0.00 0.00 2.90
5283 5466 7.971722 TCAGACGACTCGTTTGATTCATTATAA 59.028 33.333 18.18 0.00 43.90 0.98
5284 5467 8.755941 CAGACGACTCGTTTGATTCATTATAAT 58.244 33.333 15.26 0.00 43.11 1.28
5285 5468 8.969267 AGACGACTCGTTTGATTCATTATAATC 58.031 33.333 5.37 0.00 41.37 1.75
5286 5469 8.642908 ACGACTCGTTTGATTCATTATAATCA 57.357 30.769 0.00 0.00 39.00 2.57
5287 5470 8.755941 ACGACTCGTTTGATTCATTATAATCAG 58.244 33.333 0.00 0.00 37.60 2.90
5288 5471 8.217115 CGACTCGTTTGATTCATTATAATCAGG 58.783 37.037 0.00 0.00 44.43 3.86
5289 5472 8.964476 ACTCGTTTGATTCATTATAATCAGGT 57.036 30.769 0.00 0.00 44.43 4.00
5290 5473 9.046296 ACTCGTTTGATTCATTATAATCAGGTC 57.954 33.333 0.00 0.00 44.43 3.85
5291 5474 8.956533 TCGTTTGATTCATTATAATCAGGTCA 57.043 30.769 0.00 0.00 44.43 4.02
5292 5475 9.045223 TCGTTTGATTCATTATAATCAGGTCAG 57.955 33.333 0.00 0.00 44.43 3.51
5293 5476 9.045223 CGTTTGATTCATTATAATCAGGTCAGA 57.955 33.333 0.00 0.00 44.43 3.27
5321 5504 1.908299 GCCAGGAGGGGTTTGGTTG 60.908 63.158 0.00 0.00 37.04 3.77
5425 6931 1.043816 AGATGCGACCCCTCACATAG 58.956 55.000 0.00 0.00 0.00 2.23
5462 6968 4.407365 GAAGGGAGGAAAAGACCAATTCA 58.593 43.478 0.00 0.00 0.00 2.57
5482 6988 9.613428 CAATTCAAACAATAGACATACTCCCTA 57.387 33.333 0.00 0.00 0.00 3.53
5486 6992 9.832445 TCAAACAATAGACATACTCCCTAAATC 57.168 33.333 0.00 0.00 0.00 2.17
5487 6993 9.838339 CAAACAATAGACATACTCCCTAAATCT 57.162 33.333 0.00 0.00 0.00 2.40
5497 7003 9.884814 ACATACTCCCTAAATCTTATACTCACT 57.115 33.333 0.00 0.00 0.00 3.41
5575 7278 9.629649 TTTAGGAATGGAGGGAGTATTATGTAT 57.370 33.333 0.00 0.00 0.00 2.29
5621 7324 5.691305 GCTACACATGCTTTCACAATTCAAA 59.309 36.000 0.00 0.00 0.00 2.69
5698 7606 8.537016 ACTATGACAAGCCAAAAGTAGTATACA 58.463 33.333 5.50 0.00 46.26 2.29
5779 7687 2.013563 GCATGGAATCAACTGAGGCGA 61.014 52.381 0.00 0.00 0.00 5.54
5780 7688 2.358957 CATGGAATCAACTGAGGCGAA 58.641 47.619 0.00 0.00 0.00 4.70
5781 7689 2.099141 TGGAATCAACTGAGGCGAAG 57.901 50.000 0.00 0.00 0.00 3.79
5782 7690 1.339055 TGGAATCAACTGAGGCGAAGG 60.339 52.381 0.00 0.00 0.00 3.46
5787 7695 2.218603 TCAACTGAGGCGAAGGAAAAC 58.781 47.619 0.00 0.00 0.00 2.43
5813 7721 0.179062 CAGGCCAGAGACACATAGCC 60.179 60.000 5.01 0.00 40.79 3.93
5815 7723 1.884926 GCCAGAGACACATAGCCGC 60.885 63.158 0.00 0.00 0.00 6.53
5817 7725 0.249238 CCAGAGACACATAGCCGCTC 60.249 60.000 0.00 0.00 0.00 5.03
5818 7726 0.249238 CAGAGACACATAGCCGCTCC 60.249 60.000 0.00 0.00 0.00 4.70
5819 7727 1.068250 GAGACACATAGCCGCTCCC 59.932 63.158 0.00 0.00 0.00 4.30
5820 7728 1.381872 AGACACATAGCCGCTCCCT 60.382 57.895 0.00 0.00 0.00 4.20
5821 7729 0.978146 AGACACATAGCCGCTCCCTT 60.978 55.000 0.00 0.00 0.00 3.95
5822 7730 0.107654 GACACATAGCCGCTCCCTTT 60.108 55.000 0.00 0.00 0.00 3.11
5940 7848 4.066578 TGCCCATATAGATGCCTCTAGT 57.933 45.455 4.97 0.00 37.41 2.57
5943 7851 4.467795 GCCCATATAGATGCCTCTAGTTCA 59.532 45.833 4.97 0.00 37.41 3.18
5969 7878 6.287107 TGACATTTTCTTCAAGTCTCGAAC 57.713 37.500 0.00 0.00 0.00 3.95
5995 7904 6.040842 AGTTCAATTTCAGTGTACCTTTGCAT 59.959 34.615 0.00 0.00 0.00 3.96
6035 7947 8.887717 CCCATAATATATAAGAGTTCAGCTTGC 58.112 37.037 0.00 0.00 0.00 4.01
6043 7955 1.658409 GTTCAGCTTGCACAACGGC 60.658 57.895 0.00 0.00 0.00 5.68
6056 7968 4.069304 GCACAACGGCCTTATATTATGGA 58.931 43.478 0.00 0.00 0.00 3.41
6057 7969 4.154195 GCACAACGGCCTTATATTATGGAG 59.846 45.833 0.00 0.00 0.00 3.86
6058 7970 5.547465 CACAACGGCCTTATATTATGGAGA 58.453 41.667 0.00 0.00 0.00 3.71
6059 7971 5.995282 CACAACGGCCTTATATTATGGAGAA 59.005 40.000 0.00 0.00 0.00 2.87
6062 7974 7.724061 ACAACGGCCTTATATTATGGAGAAAAT 59.276 33.333 0.00 0.00 0.00 1.82
6063 7975 8.576442 CAACGGCCTTATATTATGGAGAAAATT 58.424 33.333 0.00 0.00 0.00 1.82
6080 10967 9.561069 GGAGAAAATTACATGATAGTACCACAT 57.439 33.333 0.00 0.00 0.00 3.21
6093 10980 2.439837 CCACATTTGGGGCAGTGTT 58.560 52.632 0.00 0.00 39.57 3.32
6094 10981 0.033781 CCACATTTGGGGCAGTGTTG 59.966 55.000 0.00 0.00 39.57 3.33
6105 10992 1.378531 GCAGTGTTGGCGGATTGATA 58.621 50.000 0.00 0.00 0.00 2.15
6106 10993 1.064060 GCAGTGTTGGCGGATTGATAC 59.936 52.381 0.00 0.00 0.00 2.24
6108 10995 1.280710 AGTGTTGGCGGATTGATACCA 59.719 47.619 0.00 0.00 0.00 3.25
6109 10996 1.670811 GTGTTGGCGGATTGATACCAG 59.329 52.381 0.00 0.00 32.79 4.00
6110 10997 1.280710 TGTTGGCGGATTGATACCAGT 59.719 47.619 0.00 0.00 32.79 4.00
6111 10998 2.290641 TGTTGGCGGATTGATACCAGTT 60.291 45.455 0.00 0.00 32.79 3.16
6112 10999 2.752903 GTTGGCGGATTGATACCAGTTT 59.247 45.455 0.00 0.00 32.79 2.66
6113 11000 3.080300 TGGCGGATTGATACCAGTTTT 57.920 42.857 0.00 0.00 0.00 2.43
6115 11002 2.031683 GGCGGATTGATACCAGTTTTCG 59.968 50.000 0.00 0.00 0.00 3.46
6120 11007 6.551736 CGGATTGATACCAGTTTTCGAAATT 58.448 36.000 12.12 0.26 0.00 1.82
6130 11017 6.469915 ACCAGTTTTCGAAATTTTTACGTGTC 59.530 34.615 12.12 0.00 0.00 3.67
6132 11019 7.305190 CCAGTTTTCGAAATTTTTACGTGTCAG 60.305 37.037 12.12 0.00 0.00 3.51
6133 11020 7.217447 CAGTTTTCGAAATTTTTACGTGTCAGT 59.783 33.333 12.12 0.00 0.00 3.41
6134 11021 8.389603 AGTTTTCGAAATTTTTACGTGTCAGTA 58.610 29.630 12.12 0.00 0.00 2.74
6137 11024 5.752472 TCGAAATTTTTACGTGTCAGTACCA 59.248 36.000 0.00 0.00 0.00 3.25
6138 11025 6.257411 TCGAAATTTTTACGTGTCAGTACCAA 59.743 34.615 0.00 0.00 0.00 3.67
6139 11026 6.572254 CGAAATTTTTACGTGTCAGTACCAAG 59.428 38.462 0.00 0.00 0.00 3.61
6142 11029 6.740411 TTTTTACGTGTCAGTACCAAGTTT 57.260 33.333 0.00 0.00 0.00 2.66
6143 11030 5.971895 TTTACGTGTCAGTACCAAGTTTC 57.028 39.130 0.00 0.00 0.00 2.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 3.888930 AGAATTTCACCGCTCAGGAAAAA 59.111 39.130 0.00 0.00 45.00 1.94
20 21 3.253188 CAGAATTTCACCGCTCAGGAAAA 59.747 43.478 0.00 0.00 45.00 2.29
21 22 2.813754 CAGAATTTCACCGCTCAGGAAA 59.186 45.455 0.00 0.00 45.00 3.13
22 23 2.038426 TCAGAATTTCACCGCTCAGGAA 59.962 45.455 0.00 0.00 45.00 3.36
23 24 1.623311 TCAGAATTTCACCGCTCAGGA 59.377 47.619 0.00 0.00 45.00 3.86
25 26 1.734465 GGTCAGAATTTCACCGCTCAG 59.266 52.381 0.00 0.00 0.00 3.35
26 27 1.808411 GGTCAGAATTTCACCGCTCA 58.192 50.000 0.00 0.00 0.00 4.26
27 28 0.721718 CGGTCAGAATTTCACCGCTC 59.278 55.000 13.39 0.00 46.08 5.03
28 29 2.840974 CGGTCAGAATTTCACCGCT 58.159 52.632 13.39 0.00 46.08 5.52
31 32 2.178912 TCACCGGTCAGAATTTCACC 57.821 50.000 2.59 0.00 0.00 4.02
32 33 4.475944 CAATTCACCGGTCAGAATTTCAC 58.524 43.478 23.40 0.00 41.20 3.18
33 34 3.057596 GCAATTCACCGGTCAGAATTTCA 60.058 43.478 23.40 0.00 41.20 2.69
34 35 3.501950 GCAATTCACCGGTCAGAATTTC 58.498 45.455 23.40 17.73 41.20 2.17
35 36 2.231235 GGCAATTCACCGGTCAGAATTT 59.769 45.455 23.40 11.24 41.20 1.82
36 37 1.818674 GGCAATTCACCGGTCAGAATT 59.181 47.619 21.30 21.30 43.23 2.17
37 38 1.004745 AGGCAATTCACCGGTCAGAAT 59.995 47.619 2.59 9.50 36.09 2.40
38 39 0.400213 AGGCAATTCACCGGTCAGAA 59.600 50.000 2.59 7.04 0.00 3.02
39 40 0.400213 AAGGCAATTCACCGGTCAGA 59.600 50.000 2.59 0.00 0.00 3.27
40 41 0.804989 GAAGGCAATTCACCGGTCAG 59.195 55.000 2.59 0.00 37.88 3.51
41 42 0.608035 GGAAGGCAATTCACCGGTCA 60.608 55.000 2.59 0.00 39.91 4.02
42 43 0.322546 AGGAAGGCAATTCACCGGTC 60.323 55.000 2.59 0.00 39.91 4.79
43 44 0.322546 GAGGAAGGCAATTCACCGGT 60.323 55.000 0.00 0.00 39.91 5.28
44 45 0.035056 AGAGGAAGGCAATTCACCGG 60.035 55.000 0.00 0.00 39.91 5.28
45 46 1.089920 CAGAGGAAGGCAATTCACCG 58.910 55.000 3.64 0.00 39.91 4.94
46 47 2.363683 CTCAGAGGAAGGCAATTCACC 58.636 52.381 3.64 0.00 39.91 4.02
47 48 1.742268 GCTCAGAGGAAGGCAATTCAC 59.258 52.381 0.00 0.00 39.91 3.18
48 49 1.352017 TGCTCAGAGGAAGGCAATTCA 59.648 47.619 0.00 0.00 39.91 2.57
49 50 2.119801 TGCTCAGAGGAAGGCAATTC 57.880 50.000 0.00 0.00 37.17 2.17
50 51 2.560105 GTTTGCTCAGAGGAAGGCAATT 59.440 45.455 4.36 0.00 42.86 2.32
51 52 2.165998 GTTTGCTCAGAGGAAGGCAAT 58.834 47.619 4.36 0.00 42.86 3.56
52 53 1.143684 AGTTTGCTCAGAGGAAGGCAA 59.856 47.619 4.36 0.00 41.90 4.52
53 54 0.767375 AGTTTGCTCAGAGGAAGGCA 59.233 50.000 4.36 0.00 0.00 4.75
54 55 2.027653 ACTAGTTTGCTCAGAGGAAGGC 60.028 50.000 4.36 2.81 0.00 4.35
55 56 3.971245 ACTAGTTTGCTCAGAGGAAGG 57.029 47.619 4.36 0.58 0.00 3.46
56 57 6.625873 AAAAACTAGTTTGCTCAGAGGAAG 57.374 37.500 21.22 0.00 32.36 3.46
78 79 8.788806 TGATTTTCTCAGAACCGCTAATAAAAA 58.211 29.630 0.00 0.00 0.00 1.94
79 80 8.330466 TGATTTTCTCAGAACCGCTAATAAAA 57.670 30.769 0.00 0.00 0.00 1.52
80 81 7.915293 TGATTTTCTCAGAACCGCTAATAAA 57.085 32.000 0.00 0.00 0.00 1.40
93 94 9.905071 ACCTTGTGGGCTATCTGATTTTCTCAG 62.905 44.444 0.00 0.00 45.03 3.35
94 95 4.842531 TGTGGGCTATCTGATTTTCTCA 57.157 40.909 0.00 0.00 0.00 3.27
95 96 4.578105 CCTTGTGGGCTATCTGATTTTCTC 59.422 45.833 0.00 0.00 0.00 2.87
96 97 4.018050 ACCTTGTGGGCTATCTGATTTTCT 60.018 41.667 0.00 0.00 39.10 2.52
97 98 4.273318 ACCTTGTGGGCTATCTGATTTTC 58.727 43.478 0.00 0.00 39.10 2.29
98 99 4.322057 ACCTTGTGGGCTATCTGATTTT 57.678 40.909 0.00 0.00 39.10 1.82
99 100 5.044846 AGTTACCTTGTGGGCTATCTGATTT 60.045 40.000 0.00 0.00 39.10 2.17
100 101 4.475016 AGTTACCTTGTGGGCTATCTGATT 59.525 41.667 0.00 0.00 39.10 2.57
101 102 4.040755 AGTTACCTTGTGGGCTATCTGAT 58.959 43.478 0.00 0.00 39.10 2.90
102 103 3.450904 AGTTACCTTGTGGGCTATCTGA 58.549 45.455 0.00 0.00 39.10 3.27
103 104 3.914426 AGTTACCTTGTGGGCTATCTG 57.086 47.619 0.00 0.00 39.10 2.90
104 105 3.844211 TGAAGTTACCTTGTGGGCTATCT 59.156 43.478 0.00 0.00 39.10 1.98
105 106 4.216411 TGAAGTTACCTTGTGGGCTATC 57.784 45.455 0.00 0.00 39.10 2.08
106 107 4.650972 TTGAAGTTACCTTGTGGGCTAT 57.349 40.909 0.00 0.00 39.10 2.97
107 108 4.440826 TTTGAAGTTACCTTGTGGGCTA 57.559 40.909 0.00 0.00 39.10 3.93
108 109 3.306472 TTTGAAGTTACCTTGTGGGCT 57.694 42.857 0.00 0.00 39.10 5.19
109 110 4.394439 TTTTTGAAGTTACCTTGTGGGC 57.606 40.909 0.00 0.00 39.10 5.36
132 133 2.101640 ACCTTGTGGGCCATCTTTTT 57.898 45.000 10.70 0.00 39.10 1.94
133 134 2.990740 TACCTTGTGGGCCATCTTTT 57.009 45.000 10.70 0.00 39.10 2.27
134 135 2.897326 GTTTACCTTGTGGGCCATCTTT 59.103 45.455 10.70 0.00 39.10 2.52
135 136 2.158385 TGTTTACCTTGTGGGCCATCTT 60.158 45.455 10.70 0.00 39.10 2.40
136 137 1.427368 TGTTTACCTTGTGGGCCATCT 59.573 47.619 10.70 0.00 39.10 2.90
137 138 1.544246 GTGTTTACCTTGTGGGCCATC 59.456 52.381 10.70 4.10 39.10 3.51
138 139 1.133325 TGTGTTTACCTTGTGGGCCAT 60.133 47.619 10.70 0.00 39.10 4.40
139 140 0.259065 TGTGTTTACCTTGTGGGCCA 59.741 50.000 0.00 0.00 39.10 5.36
140 141 0.671796 GTGTGTTTACCTTGTGGGCC 59.328 55.000 0.00 0.00 39.10 5.80
141 142 0.671796 GGTGTGTTTACCTTGTGGGC 59.328 55.000 0.00 0.00 37.74 5.36
149 150 2.876550 GGACTTGTCAGGTGTGTTTACC 59.123 50.000 0.00 0.00 41.17 2.85
150 151 2.876550 GGGACTTGTCAGGTGTGTTTAC 59.123 50.000 0.00 0.00 0.00 2.01
151 152 2.158726 GGGGACTTGTCAGGTGTGTTTA 60.159 50.000 0.00 0.00 0.00 2.01
152 153 1.409661 GGGGACTTGTCAGGTGTGTTT 60.410 52.381 0.00 0.00 0.00 2.83
153 154 0.182775 GGGGACTTGTCAGGTGTGTT 59.817 55.000 0.00 0.00 0.00 3.32
154 155 0.694444 AGGGGACTTGTCAGGTGTGT 60.694 55.000 0.00 0.00 37.44 3.72
155 156 1.002087 GTAGGGGACTTGTCAGGTGTG 59.998 57.143 0.00 0.00 43.67 3.82
156 157 1.132817 AGTAGGGGACTTGTCAGGTGT 60.133 52.381 0.00 0.00 43.67 4.16
157 158 1.645710 AGTAGGGGACTTGTCAGGTG 58.354 55.000 0.00 0.00 43.67 4.00
222 223 4.714308 AGGGGAACACATTTGTCTCAAAAA 59.286 37.500 0.00 0.00 33.55 1.94
223 224 4.285863 AGGGGAACACATTTGTCTCAAAA 58.714 39.130 0.00 0.00 33.55 2.44
224 225 3.909732 AGGGGAACACATTTGTCTCAAA 58.090 40.909 0.00 0.00 33.55 2.69
225 226 3.593442 AGGGGAACACATTTGTCTCAA 57.407 42.857 0.00 0.00 33.55 3.02
226 227 3.650942 AGTAGGGGAACACATTTGTCTCA 59.349 43.478 0.00 0.00 33.55 3.27
229 230 5.416271 TCTAGTAGGGGAACACATTTGTC 57.584 43.478 0.00 0.00 33.55 3.18
231 232 5.368989 GGATCTAGTAGGGGAACACATTTG 58.631 45.833 0.00 0.00 0.00 2.32
233 234 3.974642 GGGATCTAGTAGGGGAACACATT 59.025 47.826 0.00 0.00 0.00 2.71
236 237 2.327373 GGGGATCTAGTAGGGGAACAC 58.673 57.143 0.00 0.00 0.00 3.32
241 242 2.269940 CCAATGGGGATCTAGTAGGGG 58.730 57.143 0.00 0.00 40.01 4.79
248 249 2.126882 CACTGGACCAATGGGGATCTA 58.873 52.381 3.55 0.00 41.15 1.98
249 250 0.921896 CACTGGACCAATGGGGATCT 59.078 55.000 3.55 0.00 41.15 2.75
252 253 2.917897 GCCACTGGACCAATGGGGA 61.918 63.158 23.05 0.00 41.15 4.81
253 254 2.362889 GCCACTGGACCAATGGGG 60.363 66.667 23.05 10.84 44.81 4.96
289 290 3.818787 CCCAGAATGCGCAGTGGC 61.819 66.667 18.12 0.54 31.97 5.01
340 365 1.342174 GTCAACCCACTAGTCGTTCCA 59.658 52.381 0.00 0.00 0.00 3.53
357 382 0.898326 TCGTGAAGCTAGCTGGGTCA 60.898 55.000 20.16 15.77 0.00 4.02
363 388 2.885861 CGGGTCGTGAAGCTAGCT 59.114 61.111 12.68 12.68 0.00 3.32
364 389 2.886124 GCGGGTCGTGAAGCTAGC 60.886 66.667 6.62 6.62 0.00 3.42
365 390 1.517257 CAGCGGGTCGTGAAGCTAG 60.517 63.158 0.00 0.00 37.94 3.42
366 391 2.571757 CAGCGGGTCGTGAAGCTA 59.428 61.111 0.00 0.00 37.94 3.32
430 455 1.293498 GCAAAGGGTCTCGAGCAGA 59.707 57.895 7.81 0.00 0.00 4.26
431 456 1.743252 GGCAAAGGGTCTCGAGCAG 60.743 63.158 7.81 0.00 0.00 4.24
433 458 2.436824 GGGCAAAGGGTCTCGAGC 60.437 66.667 7.81 2.69 0.00 5.03
435 460 2.602267 TCGGGCAAAGGGTCTCGA 60.602 61.111 0.00 0.00 0.00 4.04
438 463 2.430367 GTGTCGGGCAAAGGGTCT 59.570 61.111 0.00 0.00 0.00 3.85
439 464 2.671963 GGTGTCGGGCAAAGGGTC 60.672 66.667 0.00 0.00 0.00 4.46
440 465 4.280019 GGGTGTCGGGCAAAGGGT 62.280 66.667 0.00 0.00 0.00 4.34
441 466 4.278513 TGGGTGTCGGGCAAAGGG 62.279 66.667 0.00 0.00 0.00 3.95
442 467 2.672996 CTGGGTGTCGGGCAAAGG 60.673 66.667 0.00 0.00 0.00 3.11
443 468 3.365265 GCTGGGTGTCGGGCAAAG 61.365 66.667 0.00 0.00 0.00 2.77
444 469 4.966787 GGCTGGGTGTCGGGCAAA 62.967 66.667 0.00 0.00 45.65 3.68
499 524 3.844090 GAGGCAGGAGCGGAGGAC 61.844 72.222 0.00 0.00 43.41 3.85
622 647 4.459089 GTGCGGACTGGGAGGCTC 62.459 72.222 5.78 5.78 0.00 4.70
624 649 4.459089 GAGTGCGGACTGGGAGGC 62.459 72.222 16.62 0.00 30.16 4.70
625 650 3.775654 GGAGTGCGGACTGGGAGG 61.776 72.222 16.62 0.00 30.16 4.30
626 651 4.135153 CGGAGTGCGGACTGGGAG 62.135 72.222 16.62 0.00 30.16 4.30
651 676 0.178068 TACCTCAAATCAGGCCGAGC 59.822 55.000 0.00 0.00 36.98 5.03
652 677 2.760374 GATACCTCAAATCAGGCCGAG 58.240 52.381 0.00 0.00 36.98 4.63
653 678 1.068588 CGATACCTCAAATCAGGCCGA 59.931 52.381 0.00 0.00 36.98 5.54
654 679 1.202533 ACGATACCTCAAATCAGGCCG 60.203 52.381 0.00 0.00 36.98 6.13
655 680 2.622064 ACGATACCTCAAATCAGGCC 57.378 50.000 0.00 0.00 36.98 5.19
656 681 2.540101 CGAACGATACCTCAAATCAGGC 59.460 50.000 0.00 0.00 36.98 4.85
657 682 3.782046 ACGAACGATACCTCAAATCAGG 58.218 45.455 0.14 0.00 39.80 3.86
658 683 3.797256 GGACGAACGATACCTCAAATCAG 59.203 47.826 0.14 0.00 0.00 2.90
659 684 3.193903 TGGACGAACGATACCTCAAATCA 59.806 43.478 0.14 0.00 0.00 2.57
660 685 3.777478 TGGACGAACGATACCTCAAATC 58.223 45.455 0.14 0.00 0.00 2.17
661 686 3.880047 TGGACGAACGATACCTCAAAT 57.120 42.857 0.14 0.00 0.00 2.32
662 687 3.880047 ATGGACGAACGATACCTCAAA 57.120 42.857 0.14 0.00 0.00 2.69
663 688 3.446161 AGAATGGACGAACGATACCTCAA 59.554 43.478 0.14 0.00 0.00 3.02
664 689 3.021695 AGAATGGACGAACGATACCTCA 58.978 45.455 0.14 0.00 0.00 3.86
665 690 3.550436 GGAGAATGGACGAACGATACCTC 60.550 52.174 0.14 0.00 0.00 3.85
666 691 2.361438 GGAGAATGGACGAACGATACCT 59.639 50.000 0.14 0.00 0.00 3.08
667 692 2.100252 TGGAGAATGGACGAACGATACC 59.900 50.000 0.14 2.62 0.00 2.73
668 693 3.431922 TGGAGAATGGACGAACGATAC 57.568 47.619 0.14 0.00 0.00 2.24
669 694 4.665833 ATTGGAGAATGGACGAACGATA 57.334 40.909 0.14 0.00 0.00 2.92
670 695 3.543680 ATTGGAGAATGGACGAACGAT 57.456 42.857 0.14 0.00 0.00 3.73
671 696 3.259064 GAATTGGAGAATGGACGAACGA 58.741 45.455 0.14 0.00 0.00 3.85
672 697 2.351726 GGAATTGGAGAATGGACGAACG 59.648 50.000 0.00 0.00 0.00 3.95
673 698 3.610911 AGGAATTGGAGAATGGACGAAC 58.389 45.455 0.00 0.00 0.00 3.95
674 699 3.263170 TGAGGAATTGGAGAATGGACGAA 59.737 43.478 0.00 0.00 0.00 3.85
675 700 2.837591 TGAGGAATTGGAGAATGGACGA 59.162 45.455 0.00 0.00 0.00 4.20
676 701 3.266510 TGAGGAATTGGAGAATGGACG 57.733 47.619 0.00 0.00 0.00 4.79
677 702 4.952335 ACATTGAGGAATTGGAGAATGGAC 59.048 41.667 0.00 0.00 0.00 4.02
678 703 5.197224 ACATTGAGGAATTGGAGAATGGA 57.803 39.130 0.00 0.00 0.00 3.41
679 704 5.927281 AACATTGAGGAATTGGAGAATGG 57.073 39.130 0.00 0.00 0.00 3.16
680 705 6.927416 TCAAACATTGAGGAATTGGAGAATG 58.073 36.000 0.00 0.00 34.08 2.67
681 706 7.618512 AGATCAAACATTGAGGAATTGGAGAAT 59.381 33.333 0.00 0.00 43.98 2.40
682 707 6.950041 AGATCAAACATTGAGGAATTGGAGAA 59.050 34.615 0.00 0.00 43.98 2.87
683 708 6.487828 AGATCAAACATTGAGGAATTGGAGA 58.512 36.000 0.00 0.00 43.98 3.71
684 709 6.770746 AGATCAAACATTGAGGAATTGGAG 57.229 37.500 0.00 0.00 43.98 3.86
685 710 6.830324 CCTAGATCAAACATTGAGGAATTGGA 59.170 38.462 0.00 0.00 43.98 3.53
686 711 6.040166 CCCTAGATCAAACATTGAGGAATTGG 59.960 42.308 0.00 0.00 43.98 3.16
687 712 6.604795 ACCCTAGATCAAACATTGAGGAATTG 59.395 38.462 0.00 0.00 43.98 2.32
688 713 6.735556 ACCCTAGATCAAACATTGAGGAATT 58.264 36.000 0.00 0.00 43.98 2.17
689 714 6.332976 ACCCTAGATCAAACATTGAGGAAT 57.667 37.500 0.00 0.00 43.98 3.01
690 715 5.779241 ACCCTAGATCAAACATTGAGGAA 57.221 39.130 0.00 0.00 43.98 3.36
691 716 5.779241 AACCCTAGATCAAACATTGAGGA 57.221 39.130 0.00 0.00 43.98 3.71
692 717 5.393461 GCAAACCCTAGATCAAACATTGAGG 60.393 44.000 0.00 0.00 43.98 3.86
693 718 5.644644 GCAAACCCTAGATCAAACATTGAG 58.355 41.667 0.00 0.00 43.98 3.02
694 719 4.155826 CGCAAACCCTAGATCAAACATTGA 59.844 41.667 0.00 0.00 45.01 2.57
695 720 4.082787 ACGCAAACCCTAGATCAAACATTG 60.083 41.667 0.00 0.00 0.00 2.82
696 721 4.079253 ACGCAAACCCTAGATCAAACATT 58.921 39.130 0.00 0.00 0.00 2.71
697 722 3.440173 CACGCAAACCCTAGATCAAACAT 59.560 43.478 0.00 0.00 0.00 2.71
698 723 2.811431 CACGCAAACCCTAGATCAAACA 59.189 45.455 0.00 0.00 0.00 2.83
699 724 2.414161 GCACGCAAACCCTAGATCAAAC 60.414 50.000 0.00 0.00 0.00 2.93
700 725 1.810151 GCACGCAAACCCTAGATCAAA 59.190 47.619 0.00 0.00 0.00 2.69
701 726 1.003118 AGCACGCAAACCCTAGATCAA 59.997 47.619 0.00 0.00 0.00 2.57
702 727 0.613260 AGCACGCAAACCCTAGATCA 59.387 50.000 0.00 0.00 0.00 2.92
703 728 2.596904 TAGCACGCAAACCCTAGATC 57.403 50.000 0.00 0.00 0.00 2.75
704 729 3.560636 AATAGCACGCAAACCCTAGAT 57.439 42.857 0.00 0.00 0.00 1.98
705 730 3.343941 AAATAGCACGCAAACCCTAGA 57.656 42.857 0.00 0.00 0.00 2.43
706 731 4.434713 AAAAATAGCACGCAAACCCTAG 57.565 40.909 0.00 0.00 0.00 3.02
729 754 2.998169 TGTACTGTCCAGTGCACAACAC 60.998 50.000 21.04 12.05 46.49 3.32
730 755 1.208293 TGTACTGTCCAGTGCACAACA 59.792 47.619 21.04 17.92 46.49 3.33
731 756 1.948104 TGTACTGTCCAGTGCACAAC 58.052 50.000 21.04 14.24 46.49 3.32
736 761 4.503910 TCATGTATTGTACTGTCCAGTGC 58.496 43.478 10.15 9.22 42.52 4.40
737 762 6.091305 CAGTTCATGTATTGTACTGTCCAGTG 59.909 42.308 10.15 0.00 44.39 3.66
738 763 6.166279 CAGTTCATGTATTGTACTGTCCAGT 58.834 40.000 5.15 5.15 44.39 4.00
739 764 6.653273 CAGTTCATGTATTGTACTGTCCAG 57.347 41.667 0.00 0.00 44.39 3.86
745 770 8.846943 TTGTTCATCAGTTCATGTATTGTACT 57.153 30.769 0.00 0.00 36.49 2.73
746 771 9.329913 GTTTGTTCATCAGTTCATGTATTGTAC 57.670 33.333 0.00 0.00 0.00 2.90
747 772 9.061435 TGTTTGTTCATCAGTTCATGTATTGTA 57.939 29.630 0.00 0.00 0.00 2.41
748 773 7.862372 GTGTTTGTTCATCAGTTCATGTATTGT 59.138 33.333 0.00 0.00 0.00 2.71
749 774 7.059831 CGTGTTTGTTCATCAGTTCATGTATTG 59.940 37.037 0.00 0.00 0.00 1.90
750 775 7.077605 CGTGTTTGTTCATCAGTTCATGTATT 58.922 34.615 0.00 0.00 0.00 1.89
751 776 6.204688 ACGTGTTTGTTCATCAGTTCATGTAT 59.795 34.615 0.00 0.00 0.00 2.29
752 777 5.525745 ACGTGTTTGTTCATCAGTTCATGTA 59.474 36.000 0.00 0.00 0.00 2.29
753 778 4.335315 ACGTGTTTGTTCATCAGTTCATGT 59.665 37.500 0.00 0.00 0.00 3.21
754 779 4.847633 ACGTGTTTGTTCATCAGTTCATG 58.152 39.130 0.00 0.00 0.00 3.07
755 780 6.612247 TTACGTGTTTGTTCATCAGTTCAT 57.388 33.333 0.00 0.00 0.00 2.57
756 781 6.612247 ATTACGTGTTTGTTCATCAGTTCA 57.388 33.333 0.00 0.00 0.00 3.18
757 782 8.996988 TTAATTACGTGTTTGTTCATCAGTTC 57.003 30.769 0.00 0.00 0.00 3.01
758 783 7.589954 GCTTAATTACGTGTTTGTTCATCAGTT 59.410 33.333 0.00 0.00 0.00 3.16
759 784 7.075741 GCTTAATTACGTGTTTGTTCATCAGT 58.924 34.615 0.00 0.00 0.00 3.41
760 785 7.075121 TGCTTAATTACGTGTTTGTTCATCAG 58.925 34.615 0.00 0.00 0.00 2.90
761 786 6.960468 TGCTTAATTACGTGTTTGTTCATCA 58.040 32.000 0.00 0.00 0.00 3.07
762 787 9.716507 ATATGCTTAATTACGTGTTTGTTCATC 57.283 29.630 0.00 0.00 0.00 2.92
821 846 9.368416 AGCTTACATAGTACTTCCTATCAATCA 57.632 33.333 0.00 0.00 0.00 2.57
823 848 9.988815 CAAGCTTACATAGTACTTCCTATCAAT 57.011 33.333 0.00 0.00 0.00 2.57
824 849 8.978472 ACAAGCTTACATAGTACTTCCTATCAA 58.022 33.333 0.00 0.00 0.00 2.57
825 850 8.534954 ACAAGCTTACATAGTACTTCCTATCA 57.465 34.615 0.00 0.00 0.00 2.15
826 851 9.819267 AAACAAGCTTACATAGTACTTCCTATC 57.181 33.333 0.00 0.00 0.00 2.08
831 856 9.704098 GCATAAAACAAGCTTACATAGTACTTC 57.296 33.333 0.00 0.00 0.00 3.01
832 857 9.226606 TGCATAAAACAAGCTTACATAGTACTT 57.773 29.630 0.00 0.00 0.00 2.24
833 858 8.786826 TGCATAAAACAAGCTTACATAGTACT 57.213 30.769 0.00 0.00 0.00 2.73
834 859 9.834628 TTTGCATAAAACAAGCTTACATAGTAC 57.165 29.630 0.00 0.00 0.00 2.73
850 875 8.412456 TCATTCAAGTCTCAGTTTTGCATAAAA 58.588 29.630 0.00 0.00 33.57 1.52
851 876 7.939782 TCATTCAAGTCTCAGTTTTGCATAAA 58.060 30.769 0.00 0.00 0.00 1.40
852 877 7.445096 TCTCATTCAAGTCTCAGTTTTGCATAA 59.555 33.333 0.00 0.00 0.00 1.90
853 878 6.936335 TCTCATTCAAGTCTCAGTTTTGCATA 59.064 34.615 0.00 0.00 0.00 3.14
854 879 5.766670 TCTCATTCAAGTCTCAGTTTTGCAT 59.233 36.000 0.00 0.00 0.00 3.96
855 880 5.125356 TCTCATTCAAGTCTCAGTTTTGCA 58.875 37.500 0.00 0.00 0.00 4.08
856 881 5.679734 TCTCATTCAAGTCTCAGTTTTGC 57.320 39.130 0.00 0.00 0.00 3.68
857 882 9.525409 AAAATTCTCATTCAAGTCTCAGTTTTG 57.475 29.630 0.00 0.00 0.00 2.44
860 885 9.566432 ACTAAAATTCTCATTCAAGTCTCAGTT 57.434 29.630 0.00 0.00 0.00 3.16
861 886 8.997323 CACTAAAATTCTCATTCAAGTCTCAGT 58.003 33.333 0.00 0.00 0.00 3.41
862 887 8.997323 ACACTAAAATTCTCATTCAAGTCTCAG 58.003 33.333 0.00 0.00 0.00 3.35
863 888 8.777413 CACACTAAAATTCTCATTCAAGTCTCA 58.223 33.333 0.00 0.00 0.00 3.27
864 889 8.778358 ACACACTAAAATTCTCATTCAAGTCTC 58.222 33.333 0.00 0.00 0.00 3.36
865 890 8.682936 ACACACTAAAATTCTCATTCAAGTCT 57.317 30.769 0.00 0.00 0.00 3.24
866 891 9.736023 AAACACACTAAAATTCTCATTCAAGTC 57.264 29.630 0.00 0.00 0.00 3.01
867 892 9.520204 CAAACACACTAAAATTCTCATTCAAGT 57.480 29.630 0.00 0.00 0.00 3.16
868 893 9.520204 ACAAACACACTAAAATTCTCATTCAAG 57.480 29.630 0.00 0.00 0.00 3.02
874 899 8.617809 GGTCTTACAAACACACTAAAATTCTCA 58.382 33.333 0.00 0.00 0.00 3.27
875 900 8.617809 TGGTCTTACAAACACACTAAAATTCTC 58.382 33.333 0.00 0.00 0.00 2.87
876 901 8.514330 TGGTCTTACAAACACACTAAAATTCT 57.486 30.769 0.00 0.00 0.00 2.40
881 906 9.562408 TCAATATGGTCTTACAAACACACTAAA 57.438 29.630 0.00 0.00 0.00 1.85
882 907 9.733556 ATCAATATGGTCTTACAAACACACTAA 57.266 29.630 0.00 0.00 0.00 2.24
883 908 9.378551 GATCAATATGGTCTTACAAACACACTA 57.621 33.333 0.00 0.00 0.00 2.74
884 909 8.103305 AGATCAATATGGTCTTACAAACACACT 58.897 33.333 0.00 0.00 33.15 3.55
885 910 8.268850 AGATCAATATGGTCTTACAAACACAC 57.731 34.615 0.00 0.00 33.15 3.82
895 920 8.497745 ACCACAGAAATAGATCAATATGGTCTT 58.502 33.333 0.00 0.00 38.97 3.01
896 921 8.038862 ACCACAGAAATAGATCAATATGGTCT 57.961 34.615 0.00 0.00 41.46 3.85
897 922 9.950496 ATACCACAGAAATAGATCAATATGGTC 57.050 33.333 0.00 0.00 37.81 4.02
902 927 9.625747 TGCAAATACCACAGAAATAGATCAATA 57.374 29.630 0.00 0.00 0.00 1.90
903 928 8.523915 TGCAAATACCACAGAAATAGATCAAT 57.476 30.769 0.00 0.00 0.00 2.57
904 929 7.936496 TGCAAATACCACAGAAATAGATCAA 57.064 32.000 0.00 0.00 0.00 2.57
905 930 7.936496 TTGCAAATACCACAGAAATAGATCA 57.064 32.000 0.00 0.00 0.00 2.92
908 933 9.461312 ACTAATTGCAAATACCACAGAAATAGA 57.539 29.630 1.71 0.00 0.00 1.98
916 941 9.988815 ACATTTTAACTAATTGCAAATACCACA 57.011 25.926 1.71 0.00 0.00 4.17
959 984 9.632807 CCGTCTCCATTTATTTATTTTTGACAA 57.367 29.630 0.00 0.00 0.00 3.18
960 985 9.015367 TCCGTCTCCATTTATTTATTTTTGACA 57.985 29.630 0.00 0.00 0.00 3.58
961 986 9.285770 GTCCGTCTCCATTTATTTATTTTTGAC 57.714 33.333 0.00 0.00 0.00 3.18
962 987 8.463607 GGTCCGTCTCCATTTATTTATTTTTGA 58.536 33.333 0.00 0.00 0.00 2.69
963 988 8.247562 TGGTCCGTCTCCATTTATTTATTTTTG 58.752 33.333 0.00 0.00 0.00 2.44
964 989 8.248253 GTGGTCCGTCTCCATTTATTTATTTTT 58.752 33.333 0.00 0.00 37.30 1.94
965 990 7.147966 GGTGGTCCGTCTCCATTTATTTATTTT 60.148 37.037 0.00 0.00 37.30 1.82
966 991 6.320418 GGTGGTCCGTCTCCATTTATTTATTT 59.680 38.462 0.00 0.00 37.30 1.40
967 992 5.826208 GGTGGTCCGTCTCCATTTATTTATT 59.174 40.000 0.00 0.00 37.30 1.40
968 993 5.374071 GGTGGTCCGTCTCCATTTATTTAT 58.626 41.667 0.00 0.00 37.30 1.40
969 994 4.384427 GGGTGGTCCGTCTCCATTTATTTA 60.384 45.833 0.00 0.00 37.30 1.40
970 995 3.617284 GGTGGTCCGTCTCCATTTATTT 58.383 45.455 0.00 0.00 37.30 1.40
971 996 2.092592 GGGTGGTCCGTCTCCATTTATT 60.093 50.000 0.00 0.00 37.30 1.40
972 997 1.489230 GGGTGGTCCGTCTCCATTTAT 59.511 52.381 0.00 0.00 37.30 1.40
973 998 0.906775 GGGTGGTCCGTCTCCATTTA 59.093 55.000 0.00 0.00 37.30 1.40
974 999 0.840722 AGGGTGGTCCGTCTCCATTT 60.841 55.000 0.00 0.00 41.52 2.32
975 1000 1.229529 AGGGTGGTCCGTCTCCATT 60.230 57.895 0.00 0.00 41.52 3.16
976 1001 1.990060 CAGGGTGGTCCGTCTCCAT 60.990 63.158 0.00 0.00 41.52 3.41
977 1002 2.603473 CAGGGTGGTCCGTCTCCA 60.603 66.667 0.00 0.00 41.52 3.86
978 1003 0.901580 TAACAGGGTGGTCCGTCTCC 60.902 60.000 0.00 0.00 41.52 3.71
979 1004 1.136500 GATAACAGGGTGGTCCGTCTC 59.864 57.143 0.00 0.00 41.52 3.36
980 1005 1.192428 GATAACAGGGTGGTCCGTCT 58.808 55.000 0.00 0.00 41.52 4.18
981 1006 0.899720 TGATAACAGGGTGGTCCGTC 59.100 55.000 0.00 0.00 41.52 4.79
982 1007 1.354101 TTGATAACAGGGTGGTCCGT 58.646 50.000 0.00 0.00 41.52 4.69
983 1008 2.483014 TTTGATAACAGGGTGGTCCG 57.517 50.000 0.00 0.00 41.52 4.79
984 1009 2.427095 GCATTTGATAACAGGGTGGTCC 59.573 50.000 0.00 0.00 0.00 4.46
985 1010 3.356290 AGCATTTGATAACAGGGTGGTC 58.644 45.455 0.00 0.00 0.00 4.02
986 1011 3.456380 AGCATTTGATAACAGGGTGGT 57.544 42.857 0.00 0.00 0.00 4.16
987 1012 3.316308 GCTAGCATTTGATAACAGGGTGG 59.684 47.826 10.63 0.00 0.00 4.61
988 1013 4.202441 AGCTAGCATTTGATAACAGGGTG 58.798 43.478 18.83 0.00 0.00 4.61
989 1014 4.164988 AGAGCTAGCATTTGATAACAGGGT 59.835 41.667 18.83 0.00 0.00 4.34
990 1015 4.514441 CAGAGCTAGCATTTGATAACAGGG 59.486 45.833 18.83 0.00 0.00 4.45
991 1016 4.024218 GCAGAGCTAGCATTTGATAACAGG 60.024 45.833 18.83 0.00 0.00 4.00
992 1017 4.024218 GGCAGAGCTAGCATTTGATAACAG 60.024 45.833 18.83 0.00 0.00 3.16
993 1018 3.879295 GGCAGAGCTAGCATTTGATAACA 59.121 43.478 18.83 0.00 0.00 2.41
994 1019 3.879295 TGGCAGAGCTAGCATTTGATAAC 59.121 43.478 18.83 4.56 0.00 1.89
995 1020 3.879295 GTGGCAGAGCTAGCATTTGATAA 59.121 43.478 18.83 0.00 0.00 1.75
996 1021 3.135348 AGTGGCAGAGCTAGCATTTGATA 59.865 43.478 18.83 2.18 0.00 2.15
997 1022 2.092538 AGTGGCAGAGCTAGCATTTGAT 60.093 45.455 18.83 0.00 0.00 2.57
998 1023 1.280133 AGTGGCAGAGCTAGCATTTGA 59.720 47.619 18.83 0.00 0.00 2.69
999 1024 1.400846 CAGTGGCAGAGCTAGCATTTG 59.599 52.381 18.83 12.64 0.00 2.32
1000 1025 1.004044 ACAGTGGCAGAGCTAGCATTT 59.996 47.619 18.83 0.00 0.00 2.32
1001 1026 0.617413 ACAGTGGCAGAGCTAGCATT 59.383 50.000 18.83 0.64 0.00 3.56
1002 1027 0.177604 GACAGTGGCAGAGCTAGCAT 59.822 55.000 18.83 1.39 0.00 3.79
1003 1028 1.187567 TGACAGTGGCAGAGCTAGCA 61.188 55.000 18.83 0.00 0.00 3.49
1004 1029 0.036952 TTGACAGTGGCAGAGCTAGC 60.037 55.000 6.62 6.62 0.00 3.42
1005 1030 1.001293 TGTTGACAGTGGCAGAGCTAG 59.999 52.381 0.00 0.00 0.00 3.42
1006 1031 1.047801 TGTTGACAGTGGCAGAGCTA 58.952 50.000 0.00 0.00 0.00 3.32
1007 1032 0.533755 GTGTTGACAGTGGCAGAGCT 60.534 55.000 0.00 0.00 0.00 4.09
1008 1033 1.510480 GGTGTTGACAGTGGCAGAGC 61.510 60.000 0.00 0.00 0.00 4.09
1009 1034 0.886490 GGGTGTTGACAGTGGCAGAG 60.886 60.000 0.00 0.00 0.00 3.35
1010 1035 1.148273 GGGTGTTGACAGTGGCAGA 59.852 57.895 0.00 0.00 0.00 4.26
1011 1036 0.751277 TTGGGTGTTGACAGTGGCAG 60.751 55.000 0.00 0.00 0.00 4.85
1012 1037 1.034838 GTTGGGTGTTGACAGTGGCA 61.035 55.000 0.00 0.00 0.00 4.92
1013 1038 0.751643 AGTTGGGTGTTGACAGTGGC 60.752 55.000 0.00 0.00 0.00 5.01
1016 1041 0.182775 GGGAGTTGGGTGTTGACAGT 59.817 55.000 0.00 0.00 0.00 3.55
1046 1071 2.048222 TGCGCCGAAGAAGTCAGG 60.048 61.111 4.18 0.00 0.00 3.86
1048 1073 1.372997 GTCTGCGCCGAAGAAGTCA 60.373 57.895 4.18 0.00 0.00 3.41
1050 1075 2.430921 CGTCTGCGCCGAAGAAGT 60.431 61.111 8.99 0.00 0.00 3.01
1098 1124 2.264166 GCGTTCTGCTCTGCTCCT 59.736 61.111 0.00 0.00 41.73 3.69
1134 1160 0.970937 CTGTCCCCTTCCTCGCTGTA 60.971 60.000 0.00 0.00 0.00 2.74
1137 1163 3.394836 GCTGTCCCCTTCCTCGCT 61.395 66.667 0.00 0.00 0.00 4.93
1269 1295 4.015406 ACGAGGGCGGCATTGTCA 62.015 61.111 11.15 0.00 43.17 3.58
1308 1334 1.118965 TTTGGTGGGAGAGCTCGTCA 61.119 55.000 8.37 5.35 0.00 4.35
1339 1365 3.322191 AAGAGGAGGTAGGGATGAGTC 57.678 52.381 0.00 0.00 0.00 3.36
1378 1404 3.180891 GGCTCGAGGCAAGTAACTATT 57.819 47.619 31.94 0.00 44.01 1.73
1465 1491 3.084039 GAGCTCATTGGTGTGGATCAAA 58.916 45.455 9.40 0.00 0.00 2.69
1499 1525 1.611673 CGAGGCCAAAGAATCTGTGGT 60.612 52.381 19.90 1.73 40.82 4.16
1518 1544 4.760047 CGGCAGGTGGAGGAACCG 62.760 72.222 0.00 0.00 45.53 4.44
1524 1550 4.722700 CAACCCCGGCAGGTGGAG 62.723 72.222 15.38 5.64 40.05 3.86
1538 1568 1.847890 TTAAAGTCGCCGGCAGCAAC 61.848 55.000 28.98 17.94 44.04 4.17
1547 1577 1.535462 AGCACACATGTTAAAGTCGCC 59.465 47.619 0.00 0.00 0.00 5.54
1554 1584 5.211454 CAAAATCACGAGCACACATGTTAA 58.789 37.500 0.00 0.00 0.00 2.01
1568 1598 2.283884 GCACAACCCAAACAAAATCACG 59.716 45.455 0.00 0.00 0.00 4.35
1569 1599 2.611751 GGCACAACCCAAACAAAATCAC 59.388 45.455 0.00 0.00 0.00 3.06
1570 1600 2.739932 CGGCACAACCCAAACAAAATCA 60.740 45.455 0.00 0.00 33.26 2.57
1571 1601 1.864082 CGGCACAACCCAAACAAAATC 59.136 47.619 0.00 0.00 33.26 2.17
1591 1621 1.408822 CCATCCCCAAGAAGCACCTAC 60.409 57.143 0.00 0.00 0.00 3.18
1603 1633 2.129146 CGCGTAGTACCCATCCCCA 61.129 63.158 0.00 0.00 0.00 4.96
1630 1660 3.329688 CTCGGTCGTCTGCTTCGCT 62.330 63.158 0.00 0.00 0.00 4.93
1675 1705 1.210204 TGGCCTCCATTTGAGCCTCT 61.210 55.000 3.32 0.00 39.98 3.69
1773 1803 3.124297 GTCTGAAGATTTCACAAGAGGCG 59.876 47.826 0.00 0.00 35.46 5.52
1775 1805 5.123502 CCATGTCTGAAGATTTCACAAGAGG 59.876 44.000 0.00 0.00 35.46 3.69
1841 1874 3.820467 TGACCTCAACCAAATTGCTACTG 59.180 43.478 0.00 0.00 38.29 2.74
1871 1904 8.434589 AATTCACTATCAATTTCCTTTTCCCA 57.565 30.769 0.00 0.00 0.00 4.37
1890 1923 7.759886 TGTCAGCATAAGTCTACTGTAATTCAC 59.240 37.037 0.00 0.00 0.00 3.18
1936 1969 7.980662 AGCTTAATCTGCATGCTATATGAGTAG 59.019 37.037 20.33 4.32 31.71 2.57
1956 1989 6.423182 ACAAGGCCAAGATGTTATAGCTTAA 58.577 36.000 5.01 0.00 32.18 1.85
1973 2006 5.186992 ACCCAGTTTTCAATATAACAAGGCC 59.813 40.000 0.00 0.00 0.00 5.19
1983 2016 7.469456 GCAACAAGAAGTACCCAGTTTTCAATA 60.469 37.037 0.00 0.00 0.00 1.90
1991 2024 4.141574 TGTTAGCAACAAGAAGTACCCAGT 60.142 41.667 0.00 0.00 38.72 4.00
1998 2031 6.207691 ACAAACATGTTAGCAACAAGAAGT 57.792 33.333 12.39 0.00 45.86 3.01
2008 2041 5.963586 GGCGTAGATTAACAAACATGTTAGC 59.036 40.000 12.39 0.00 35.91 3.09
2065 2098 6.073314 AGTATGTATAATACGACCACACCCT 58.927 40.000 0.00 0.00 0.00 4.34
2076 2109 9.483916 TGCACCACAATGTAGTATGTATAATAC 57.516 33.333 3.30 3.30 35.16 1.89
2079 2112 6.481976 GCTGCACCACAATGTAGTATGTATAA 59.518 38.462 0.00 0.00 35.00 0.98
2096 2136 5.477510 CAAAAAGGTTATATTGCTGCACCA 58.522 37.500 0.00 0.00 0.00 4.17
2135 2175 8.617290 TCAATGACAGATCAATCATATTGAGG 57.383 34.615 11.03 3.74 38.69 3.86
2208 2249 5.813157 CGAAACCAACAATTAAACCAAAGGT 59.187 36.000 0.00 0.00 37.65 3.50
2212 2258 7.436673 CAGAATCGAAACCAACAATTAAACCAA 59.563 33.333 0.00 0.00 0.00 3.67
2214 2260 6.921307 ACAGAATCGAAACCAACAATTAAACC 59.079 34.615 0.00 0.00 0.00 3.27
2240 2286 8.635765 AAGCATCCAGTTAGAAGTAATTTTGA 57.364 30.769 0.00 0.00 0.00 2.69
2337 2383 8.550376 CAAATGGTTACCTGTTTTTGATGAAAG 58.450 33.333 2.07 0.00 0.00 2.62
2357 2403 6.253512 GCTAAATAAACGAAAGCTCCAAATGG 59.746 38.462 0.00 0.00 0.00 3.16
2390 2436 3.006859 TGAAGATGAGAAGGACGCAGAAA 59.993 43.478 0.00 0.00 0.00 2.52
2397 2443 7.226325 CCAATACATTCTGAAGATGAGAAGGAC 59.774 40.741 0.00 0.00 35.33 3.85
2405 2451 4.467769 AGGGCCAATACATTCTGAAGATG 58.532 43.478 6.18 0.00 0.00 2.90
2476 2522 2.375174 ACAAGTGGGATAAGCCTGTCAA 59.625 45.455 0.00 0.00 36.66 3.18
2482 2528 2.633488 GACTCACAAGTGGGATAAGCC 58.367 52.381 7.15 0.00 35.28 4.35
2485 2531 3.009033 CCAAGGACTCACAAGTGGGATAA 59.991 47.826 7.15 0.00 35.28 1.75
2546 2598 9.671279 TTCAGCAATGATCAAGAAGTATAAGAA 57.329 29.630 0.00 0.00 0.00 2.52
2567 2619 2.941720 CTCTAGACCTTGCCAATTCAGC 59.058 50.000 0.00 0.00 0.00 4.26
2593 2645 4.253685 TCAATAGGTCTACTTGCTGCAAC 58.746 43.478 11.69 1.54 0.00 4.17
2698 2754 4.611943 TCGTCTCAGCATAACAAGATAGC 58.388 43.478 0.00 0.00 0.00 2.97
2709 2765 1.094073 GGCAGCAATCGTCTCAGCAT 61.094 55.000 0.00 0.00 0.00 3.79
2718 2774 2.925578 TCATTTCAAGGCAGCAATCG 57.074 45.000 0.00 0.00 0.00 3.34
2973 3111 2.711009 TCCTCACCATCCTCACTTGTTT 59.289 45.455 0.00 0.00 0.00 2.83
2998 3136 2.273557 CCGTAACTTAATGTGTCCCCG 58.726 52.381 0.00 0.00 0.00 5.73
3016 3154 1.133598 ACATTGTCATGCTCATTGCCG 59.866 47.619 10.33 0.00 42.00 5.69
3080 3218 0.609131 ACCTGGCCATTTCCTTGACG 60.609 55.000 5.51 0.00 0.00 4.35
3093 3231 2.095059 CACAAGCACAAAGATACCTGGC 60.095 50.000 0.00 0.00 0.00 4.85
3114 3252 7.530010 ACACAAAATTATGTCATGTCAGCTAC 58.470 34.615 0.00 0.00 0.00 3.58
3135 3274 8.855110 ACACATTGGTCAAATTAAGATTACACA 58.145 29.630 0.00 0.00 0.00 3.72
3290 3429 4.742438 TTCAGGCACAAAATAGAACGTC 57.258 40.909 0.00 0.00 0.00 4.34
3432 3571 1.134699 CCACATGCCAGTATCACGAGT 60.135 52.381 0.00 0.00 0.00 4.18
3433 3572 1.575244 CCACATGCCAGTATCACGAG 58.425 55.000 0.00 0.00 0.00 4.18
3434 3573 0.177836 CCCACATGCCAGTATCACGA 59.822 55.000 0.00 0.00 0.00 4.35
3435 3574 0.177836 TCCCACATGCCAGTATCACG 59.822 55.000 0.00 0.00 0.00 4.35
3436 3575 1.065491 TGTCCCACATGCCAGTATCAC 60.065 52.381 0.00 0.00 0.00 3.06
3437 3576 1.065491 GTGTCCCACATGCCAGTATCA 60.065 52.381 0.00 0.00 34.08 2.15
3438 3577 1.668419 GTGTCCCACATGCCAGTATC 58.332 55.000 0.00 0.00 34.08 2.24
3439 3578 0.255890 GGTGTCCCACATGCCAGTAT 59.744 55.000 0.00 0.00 35.86 2.12
3502 3641 8.558700 CAATAAAAGCAGCAAAACAATTAGGTT 58.441 29.630 0.00 0.00 0.00 3.50
3800 3943 7.124599 AGGAATGATGAAAGCAATGTTGGAATA 59.875 33.333 0.00 0.00 33.49 1.75
3812 3955 2.494870 ACAGGCAAGGAATGATGAAAGC 59.505 45.455 0.00 0.00 0.00 3.51
4318 4470 4.553323 TCTAGAAAGCACACCGTAACTTC 58.447 43.478 0.00 0.00 0.00 3.01
4326 4478 7.617041 ATTATGAACTTCTAGAAAGCACACC 57.383 36.000 6.63 0.00 0.00 4.16
4406 4558 6.558775 ACATTAGATAAACTGCATCCCTAGGA 59.441 38.462 11.48 0.00 35.55 2.94
4567 4720 7.704899 TCAAAAGGTGTATGTCACTATACATCG 59.295 37.037 0.00 0.00 45.17 3.84
4601 4755 0.974383 AGGGACGTAAACAGGGTGAG 59.026 55.000 0.00 0.00 0.00 3.51
4614 4769 1.376037 GAAAGCCTGGTGAGGGACG 60.376 63.158 0.00 0.00 40.19 4.79
4619 4774 1.672356 CCCGTGAAAGCCTGGTGAG 60.672 63.158 0.00 0.00 0.00 3.51
4745 4900 8.136800 AGAGATCAGATAAATATAGATGCGCAG 58.863 37.037 18.32 0.00 0.00 5.18
4820 4987 7.440198 CCTTCTGCATCTTGAATCTAGACATA 58.560 38.462 0.00 0.00 0.00 2.29
4862 5029 5.007430 GTCTGTAATCCTATTGTCGACGAGA 59.993 44.000 11.90 5.73 0.00 4.04
4866 5033 6.132791 TGAGTCTGTAATCCTATTGTCGAC 57.867 41.667 9.11 9.11 0.00 4.20
4868 5035 6.976088 AGATGAGTCTGTAATCCTATTGTCG 58.024 40.000 0.00 0.00 32.13 4.35
4873 5040 9.647918 TCAAAGTAGATGAGTCTGTAATCCTAT 57.352 33.333 0.00 0.00 35.87 2.57
4897 5067 2.033141 GCTCTTGCCAGCCACTCA 59.967 61.111 0.00 0.00 32.76 3.41
4926 5096 4.541779 CATGCCGTCTCTCATAGTACTTC 58.458 47.826 0.00 0.00 0.00 3.01
4964 5142 0.671796 CAAAGAACCCCCGTCCAAAC 59.328 55.000 0.00 0.00 0.00 2.93
4978 5156 2.618241 AGCGCATTGACAAACTCAAAGA 59.382 40.909 11.47 0.00 42.37 2.52
4993 5172 0.539438 TTTTGTCCTTCCCAGCGCAT 60.539 50.000 11.47 0.00 0.00 4.73
4998 5177 2.362077 CCAACACTTTTGTCCTTCCCAG 59.638 50.000 0.00 0.00 33.55 4.45
4999 5178 2.383855 CCAACACTTTTGTCCTTCCCA 58.616 47.619 0.00 0.00 33.55 4.37
5010 5189 6.813152 GCATACATTAAGAATGCCAACACTTT 59.187 34.615 7.79 0.00 42.69 2.66
5026 5205 5.159273 TGAGGTGACAGTTGCATACATTA 57.841 39.130 0.00 0.00 0.00 1.90
5036 5215 4.137543 GGATCAAAGTTGAGGTGACAGTT 58.862 43.478 0.00 0.00 41.08 3.16
5040 5219 3.077359 CCAGGATCAAAGTTGAGGTGAC 58.923 50.000 0.00 0.00 41.08 3.67
5147 5326 8.523658 GCCTCTGTTTCAATTCCTTATAAGTTT 58.476 33.333 11.50 0.07 0.00 2.66
5148 5327 7.890655 AGCCTCTGTTTCAATTCCTTATAAGTT 59.109 33.333 11.50 0.00 0.00 2.66
5149 5328 7.337942 CAGCCTCTGTTTCAATTCCTTATAAGT 59.662 37.037 11.50 0.00 0.00 2.24
5150 5329 7.554118 TCAGCCTCTGTTTCAATTCCTTATAAG 59.446 37.037 5.43 5.43 32.61 1.73
5153 5332 5.819991 TCAGCCTCTGTTTCAATTCCTTAT 58.180 37.500 0.00 0.00 32.61 1.73
5154 5333 5.241403 TCAGCCTCTGTTTCAATTCCTTA 57.759 39.130 0.00 0.00 32.61 2.69
5235 5415 8.602424 TCTGATTCATTTCCTACCTCTTAACAA 58.398 33.333 0.00 0.00 0.00 2.83
5260 5443 8.752254 TGATTATAATGAATCAAACGAGTCGTC 58.248 33.333 20.18 5.71 41.70 4.20
5283 5466 2.694628 GCTCTCTGATGTCTGACCTGAT 59.305 50.000 5.17 0.00 0.00 2.90
5284 5467 2.098614 GCTCTCTGATGTCTGACCTGA 58.901 52.381 5.17 0.03 0.00 3.86
5285 5468 1.136695 GGCTCTCTGATGTCTGACCTG 59.863 57.143 5.17 0.00 0.00 4.00
5286 5469 1.272928 TGGCTCTCTGATGTCTGACCT 60.273 52.381 5.17 0.00 0.00 3.85
5287 5470 1.136695 CTGGCTCTCTGATGTCTGACC 59.863 57.143 5.17 0.00 0.00 4.02
5288 5471 1.136695 CCTGGCTCTCTGATGTCTGAC 59.863 57.143 0.00 0.00 0.00 3.51
5289 5472 1.006400 TCCTGGCTCTCTGATGTCTGA 59.994 52.381 0.00 0.00 0.00 3.27
5290 5473 1.409790 CTCCTGGCTCTCTGATGTCTG 59.590 57.143 0.00 0.00 0.00 3.51
5291 5474 1.688942 CCTCCTGGCTCTCTGATGTCT 60.689 57.143 0.00 0.00 0.00 3.41
5292 5475 0.752054 CCTCCTGGCTCTCTGATGTC 59.248 60.000 0.00 0.00 0.00 3.06
5293 5476 0.690411 CCCTCCTGGCTCTCTGATGT 60.690 60.000 0.00 0.00 0.00 3.06
5294 5477 1.409251 CCCCTCCTGGCTCTCTGATG 61.409 65.000 0.00 0.00 0.00 3.07
5321 5504 6.313164 GTGTAGGAAACATTAGTTAGCTGGTC 59.687 42.308 0.00 0.00 41.10 4.02
5370 5553 2.037136 CCAAGCGAAGAGGTGCCAG 61.037 63.158 0.00 0.00 0.00 4.85
5394 6899 1.303236 CGCATCTGGTGGGGTTCAA 60.303 57.895 0.00 0.00 37.14 2.69
5425 6931 0.676151 CCTTCCTGCAGGTGAGAAGC 60.676 60.000 31.58 0.00 35.47 3.86
5491 6997 7.914346 CGTCTTATATTTAGGAACGAAGTGAGT 59.086 37.037 0.00 0.00 45.00 3.41
5492 6998 7.914346 ACGTCTTATATTTAGGAACGAAGTGAG 59.086 37.037 0.00 0.00 45.00 3.51
5493 6999 7.765307 ACGTCTTATATTTAGGAACGAAGTGA 58.235 34.615 0.00 0.00 45.00 3.41
5494 7000 7.982371 ACGTCTTATATTTAGGAACGAAGTG 57.018 36.000 0.00 0.00 45.00 3.16
5496 7002 9.685005 CAAAACGTCTTATATTTAGGAACGAAG 57.315 33.333 0.00 0.00 0.00 3.79
5497 7003 9.421806 TCAAAACGTCTTATATTTAGGAACGAA 57.578 29.630 0.00 0.00 0.00 3.85
5498 7004 8.984891 TCAAAACGTCTTATATTTAGGAACGA 57.015 30.769 0.00 0.00 0.00 3.85
5538 7044 8.002459 TCCCTCCATTCCTAAATATTTTGGTAC 58.998 37.037 22.68 0.00 35.11 3.34
5559 7065 6.820656 CCTGCATTGATACATAATACTCCCTC 59.179 42.308 0.00 0.00 0.00 4.30
5575 7278 1.452110 CCAACATCGACCTGCATTGA 58.548 50.000 0.00 0.00 0.00 2.57
5621 7324 5.357878 AGTTGCAACCAATCATCGAATATGT 59.642 36.000 25.62 0.00 32.75 2.29
5657 7565 7.172875 GCTTGTCATAGTACTATAGACTTCGGA 59.827 40.741 27.29 14.53 31.28 4.55
5698 7606 2.285818 TAACAGCCCGACCCCCAT 60.286 61.111 0.00 0.00 0.00 4.00
5779 7687 5.332743 TCTGGCCTGAATTATGTTTTCCTT 58.667 37.500 10.32 0.00 0.00 3.36
5780 7688 4.934356 TCTGGCCTGAATTATGTTTTCCT 58.066 39.130 10.32 0.00 0.00 3.36
5781 7689 4.949856 TCTCTGGCCTGAATTATGTTTTCC 59.050 41.667 13.89 0.00 0.00 3.13
5782 7690 5.415701 TGTCTCTGGCCTGAATTATGTTTTC 59.584 40.000 13.89 0.00 0.00 2.29
5787 7695 3.877559 TGTGTCTCTGGCCTGAATTATG 58.122 45.455 13.89 1.74 0.00 1.90
5813 7721 2.494059 TCAAGAGAAACAAAGGGAGCG 58.506 47.619 0.00 0.00 0.00 5.03
5815 7723 5.126067 TCTGTTCAAGAGAAACAAAGGGAG 58.874 41.667 0.00 0.00 35.08 4.30
5846 7754 5.449553 CATAGGCATAGGGAAGAAAGGTTT 58.550 41.667 0.00 0.00 0.00 3.27
5847 7755 4.141158 CCATAGGCATAGGGAAGAAAGGTT 60.141 45.833 2.21 0.00 34.65 3.50
5848 7756 3.395941 CCATAGGCATAGGGAAGAAAGGT 59.604 47.826 2.21 0.00 34.65 3.50
5940 7848 7.857389 CGAGACTTGAAGAAAATGTCAAATGAA 59.143 33.333 0.00 0.00 33.52 2.57
5943 7851 7.496529 TCGAGACTTGAAGAAAATGTCAAAT 57.503 32.000 0.00 0.00 33.52 2.32
5969 7878 5.687285 GCAAAGGTACACTGAAATTGAACTG 59.313 40.000 0.00 0.00 0.00 3.16
5995 7904 1.526315 TATGGGACGGAGGGAGTAGA 58.474 55.000 0.00 0.00 0.00 2.59
6035 7947 5.547465 TCTCCATAATATAAGGCCGTTGTG 58.453 41.667 0.00 0.00 0.00 3.33
6059 7971 8.912988 CCCAAATGTGGTACTATCATGTAATTT 58.087 33.333 0.00 0.00 44.30 1.82
6062 7974 6.361433 CCCCAAATGTGGTACTATCATGTAA 58.639 40.000 0.00 0.00 44.30 2.41
6063 7975 5.689031 GCCCCAAATGTGGTACTATCATGTA 60.689 44.000 0.00 0.00 44.30 2.29
6068 7980 3.214328 CTGCCCCAAATGTGGTACTATC 58.786 50.000 0.00 0.00 44.30 2.08
6069 7981 2.580783 ACTGCCCCAAATGTGGTACTAT 59.419 45.455 0.00 0.00 44.30 2.12
6071 7983 0.777446 ACTGCCCCAAATGTGGTACT 59.223 50.000 0.00 0.00 44.30 2.73
6072 7984 0.887933 CACTGCCCCAAATGTGGTAC 59.112 55.000 0.00 0.00 44.30 3.34
6074 7986 0.398381 AACACTGCCCCAAATGTGGT 60.398 50.000 0.00 0.00 44.30 4.16
6075 7987 0.033781 CAACACTGCCCCAAATGTGG 59.966 55.000 0.00 0.00 45.53 4.17
6076 7988 0.033781 CCAACACTGCCCCAAATGTG 59.966 55.000 0.00 0.00 36.59 3.21
6080 10967 3.222855 CGCCAACACTGCCCCAAA 61.223 61.111 0.00 0.00 0.00 3.28
6084 10971 2.676471 AATCCGCCAACACTGCCC 60.676 61.111 0.00 0.00 0.00 5.36
6088 10975 1.280710 TGGTATCAATCCGCCAACACT 59.719 47.619 0.00 0.00 0.00 3.55
6093 10980 2.799126 AAACTGGTATCAATCCGCCA 57.201 45.000 0.00 0.00 0.00 5.69
6094 10981 2.031683 CGAAAACTGGTATCAATCCGCC 59.968 50.000 0.00 0.00 0.00 6.13
6097 10984 8.757164 AAAATTTCGAAAACTGGTATCAATCC 57.243 30.769 15.66 0.00 0.00 3.01
6105 10992 6.324042 ACACGTAAAAATTTCGAAAACTGGT 58.676 32.000 15.66 6.06 0.00 4.00
6106 10993 6.469595 TGACACGTAAAAATTTCGAAAACTGG 59.530 34.615 15.66 5.49 0.00 4.00
6108 10995 7.245604 ACTGACACGTAAAAATTTCGAAAACT 58.754 30.769 15.66 2.16 0.00 2.66
6109 10996 7.427238 ACTGACACGTAAAAATTTCGAAAAC 57.573 32.000 15.66 7.12 0.00 2.43
6110 10997 7.639461 GGTACTGACACGTAAAAATTTCGAAAA 59.361 33.333 15.66 0.00 0.00 2.29
6111 10998 7.125113 GGTACTGACACGTAAAAATTTCGAAA 58.875 34.615 13.91 13.91 0.00 3.46
6112 10999 6.257411 TGGTACTGACACGTAAAAATTTCGAA 59.743 34.615 4.93 0.00 0.00 3.71
6113 11000 5.752472 TGGTACTGACACGTAAAAATTTCGA 59.248 36.000 4.93 0.00 0.00 3.71
6115 11002 7.412063 ACTTGGTACTGACACGTAAAAATTTC 58.588 34.615 0.00 0.00 0.00 2.17
6120 11007 5.873712 TGAAACTTGGTACTGACACGTAAAA 59.126 36.000 0.00 0.00 0.00 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.