Multiple sequence alignment - TraesCS3D01G434200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G434200 chr3D 100.000 3412 0 0 1 3412 546711667 546708256 0.000000e+00 6301.0
1 TraesCS3D01G434200 chr3D 82.196 337 14 17 387 693 103232541 103232221 7.310000e-62 248.0
2 TraesCS3D01G434200 chr3D 87.500 184 22 1 3118 3301 301995761 301995579 9.590000e-51 211.0
3 TraesCS3D01G434200 chr3D 85.714 140 8 2 148 287 103232797 103232670 1.650000e-28 137.0
4 TraesCS3D01G434200 chr3A 95.758 1485 57 2 944 2423 683450190 683448707 0.000000e+00 2388.0
5 TraesCS3D01G434200 chr3A 92.444 225 13 2 136 360 683452767 683452547 5.490000e-83 318.0
6 TraesCS3D01G434200 chr3A 83.483 333 46 8 2974 3301 683446753 683446425 5.530000e-78 302.0
7 TraesCS3D01G434200 chr3A 82.792 308 21 10 2631 2921 683448700 683448408 2.630000e-61 246.0
8 TraesCS3D01G434200 chr3A 88.679 212 8 4 482 693 552803854 552804049 9.460000e-61 244.0
9 TraesCS3D01G434200 chr3A 85.326 184 25 1 3123 3304 636389010 636388827 4.490000e-44 189.0
10 TraesCS3D01G434200 chr3A 90.476 126 8 1 429 554 683452458 683452337 2.720000e-36 163.0
11 TraesCS3D01G434200 chr3A 85.821 134 13 2 837 965 683450443 683450311 1.650000e-28 137.0
12 TraesCS3D01G434200 chr3A 92.941 85 6 0 191 275 552803504 552803588 1.290000e-24 124.0
13 TraesCS3D01G434200 chr7A 89.021 1430 131 15 981 2402 458835358 458836769 0.000000e+00 1748.0
14 TraesCS3D01G434200 chr7A 85.041 1464 189 17 887 2345 458773548 458774986 0.000000e+00 1463.0
15 TraesCS3D01G434200 chr7D 88.733 1429 129 20 981 2402 401067976 401069379 0.000000e+00 1718.0
16 TraesCS3D01G434200 chr7D 83.501 497 73 3 1500 1996 400938360 400938847 4.010000e-124 455.0
17 TraesCS3D01G434200 chr7D 85.714 175 25 0 3127 3301 572019667 572019841 5.810000e-43 185.0
18 TraesCS3D01G434200 chr7B 88.157 1427 130 22 988 2402 410022684 410024083 0.000000e+00 1663.0
19 TraesCS3D01G434200 chr7B 86.265 1296 159 9 1050 2345 409890904 409892180 0.000000e+00 1389.0
20 TraesCS3D01G434200 chr7B 86.264 182 25 0 3120 3301 538214827 538215008 7.470000e-47 198.0
21 TraesCS3D01G434200 chr2A 92.593 189 10 3 2419 2604 470645829 470645642 5.610000e-68 268.0
22 TraesCS3D01G434200 chr5D 92.432 185 12 1 2425 2607 552066041 552066225 2.610000e-66 263.0
23 TraesCS3D01G434200 chr6B 91.146 192 15 1 2417 2606 525106233 525106424 3.380000e-65 259.0
24 TraesCS3D01G434200 chr5A 91.935 186 13 1 2424 2607 25118902 25118717 3.380000e-65 259.0
25 TraesCS3D01G434200 chr5A 90.206 194 17 1 2416 2607 444086661 444086854 5.650000e-63 252.0
26 TraesCS3D01G434200 chr1A 90.863 197 13 4 2414 2605 133163549 133163745 3.380000e-65 259.0
27 TraesCS3D01G434200 chr4D 91.053 190 15 1 2420 2607 10250152 10249963 4.370000e-64 255.0
28 TraesCS3D01G434200 chr4D 74.138 290 51 15 406 690 489236450 489236720 7.790000e-17 99.0
29 TraesCS3D01G434200 chr3B 90.769 195 12 5 2416 2606 60139774 60139966 4.370000e-64 255.0
30 TraesCS3D01G434200 chr3B 88.679 212 8 6 482 693 153809224 153809029 9.460000e-61 244.0
31 TraesCS3D01G434200 chr3B 85.463 227 15 7 144 360 153809636 153809418 1.590000e-53 220.0
32 TraesCS3D01G434200 chr1D 91.099 191 13 3 2421 2608 465527014 465526825 4.370000e-64 255.0
33 TraesCS3D01G434200 chr1D 87.151 179 23 0 3123 3301 492402444 492402266 1.610000e-48 204.0
34 TraesCS3D01G434200 chr2B 86.034 179 25 0 3123 3301 84975535 84975713 3.470000e-45 193.0
35 TraesCS3D01G434200 chr6D 85.955 178 25 0 3124 3301 27144948 27144771 1.250000e-44 191.0
36 TraesCS3D01G434200 chr2D 85.106 188 27 1 3117 3304 592290229 592290043 1.250000e-44 191.0
37 TraesCS3D01G434200 chr2D 86.179 123 14 3 1 121 503662728 503662607 2.760000e-26 130.0
38 TraesCS3D01G434200 chr4B 79.612 206 26 7 482 687 52968668 52968857 2.140000e-27 134.0
39 TraesCS3D01G434200 chr6A 86.364 66 5 3 2746 2810 499650500 499650438 6.110000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G434200 chr3D 546708256 546711667 3411 True 6301.000000 6301 100.000000 1 3412 1 chr3D.!!$R2 3411
1 TraesCS3D01G434200 chr3A 683446425 683452767 6342 True 592.333333 2388 88.462333 136 3301 6 chr3A.!!$R2 3165
2 TraesCS3D01G434200 chr7A 458835358 458836769 1411 False 1748.000000 1748 89.021000 981 2402 1 chr7A.!!$F2 1421
3 TraesCS3D01G434200 chr7A 458773548 458774986 1438 False 1463.000000 1463 85.041000 887 2345 1 chr7A.!!$F1 1458
4 TraesCS3D01G434200 chr7D 401067976 401069379 1403 False 1718.000000 1718 88.733000 981 2402 1 chr7D.!!$F2 1421
5 TraesCS3D01G434200 chr7B 410022684 410024083 1399 False 1663.000000 1663 88.157000 988 2402 1 chr7B.!!$F2 1414
6 TraesCS3D01G434200 chr7B 409890904 409892180 1276 False 1389.000000 1389 86.265000 1050 2345 1 chr7B.!!$F1 1295
7 TraesCS3D01G434200 chr3B 153809029 153809636 607 True 232.000000 244 87.071000 144 693 2 chr3B.!!$R1 549

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
610 700 0.105593 CCGATCTCCACCACATCCAG 59.894 60.0 0.0 0.0 0.0 3.86 F
840 2699 0.250124 CCACAACGCAGGGAGTACAA 60.250 55.0 0.0 0.0 0.0 2.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2350 4379 1.31473 GACCAAGAAACGGGAAGCAA 58.685 50.0 0.0 0.0 0.00 3.91 R
2691 4720 0.73315 GCCAGAATTTACCGTCAGGC 59.267 55.0 0.0 0.0 42.76 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.464452 GTCTGGGAACGACCTATGGG 59.536 60.000 0.00 0.00 38.98 4.00
20 21 1.146263 CTGGGAACGACCTATGGGC 59.854 63.158 0.00 0.00 38.98 5.36
21 22 2.108362 GGGAACGACCTATGGGCG 59.892 66.667 10.60 10.60 38.98 6.13
22 23 2.428925 GGGAACGACCTATGGGCGA 61.429 63.158 19.38 0.00 38.98 5.54
23 24 1.746517 GGAACGACCTATGGGCGAT 59.253 57.895 19.38 6.59 36.50 4.58
24 25 0.600255 GGAACGACCTATGGGCGATG 60.600 60.000 19.38 0.00 36.50 3.84
25 26 0.600255 GAACGACCTATGGGCGATGG 60.600 60.000 19.38 0.00 36.50 3.51
26 27 2.357517 CGACCTATGGGCGATGGC 60.358 66.667 5.87 0.00 35.33 4.40
27 28 2.872388 CGACCTATGGGCGATGGCT 61.872 63.158 5.87 0.00 39.81 4.75
28 29 1.302033 GACCTATGGGCGATGGCTG 60.302 63.158 0.00 0.00 39.81 4.85
29 30 2.033141 CCTATGGGCGATGGCTGG 59.967 66.667 0.00 0.00 39.81 4.85
30 31 2.519622 CCTATGGGCGATGGCTGGA 61.520 63.158 0.00 0.00 39.81 3.86
31 32 1.451504 CTATGGGCGATGGCTGGAA 59.548 57.895 0.00 0.00 39.81 3.53
32 33 0.886490 CTATGGGCGATGGCTGGAAC 60.886 60.000 0.00 0.00 39.81 3.62
33 34 2.337879 TATGGGCGATGGCTGGAACC 62.338 60.000 0.00 0.00 39.81 3.62
35 36 4.424711 GGCGATGGCTGGAACCCA 62.425 66.667 0.00 0.00 39.81 4.51
36 37 2.361104 GCGATGGCTGGAACCCAA 60.361 61.111 0.00 0.00 35.67 4.12
37 38 1.754234 GCGATGGCTGGAACCCAAT 60.754 57.895 0.00 0.00 35.67 3.16
38 39 1.728490 GCGATGGCTGGAACCCAATC 61.728 60.000 0.00 0.00 35.67 2.67
39 40 1.439353 CGATGGCTGGAACCCAATCG 61.439 60.000 4.74 4.74 35.67 3.34
40 41 1.076777 ATGGCTGGAACCCAATCGG 60.077 57.895 0.00 0.00 35.67 4.18
41 42 3.140814 GGCTGGAACCCAATCGGC 61.141 66.667 0.00 0.00 30.80 5.54
42 43 3.140814 GCTGGAACCCAATCGGCC 61.141 66.667 0.00 0.00 30.80 6.13
43 44 2.440247 CTGGAACCCAATCGGCCC 60.440 66.667 0.00 0.00 30.80 5.80
44 45 4.055227 TGGAACCCAATCGGCCCC 62.055 66.667 0.00 0.00 33.26 5.80
45 46 4.055227 GGAACCCAATCGGCCCCA 62.055 66.667 0.00 0.00 33.26 4.96
46 47 2.754254 GAACCCAATCGGCCCCAC 60.754 66.667 0.00 0.00 33.26 4.61
47 48 4.733542 AACCCAATCGGCCCCACG 62.734 66.667 0.00 0.00 33.26 4.94
59 60 1.650825 GCCCCACGCCAAAATTATTG 58.349 50.000 0.00 0.00 0.00 1.90
60 61 1.650825 CCCCACGCCAAAATTATTGC 58.349 50.000 0.00 0.00 0.00 3.56
61 62 1.650825 CCCACGCCAAAATTATTGCC 58.349 50.000 0.00 0.00 0.00 4.52
62 63 1.276415 CCACGCCAAAATTATTGCCG 58.724 50.000 3.43 3.43 0.00 5.69
63 64 1.276415 CACGCCAAAATTATTGCCGG 58.724 50.000 0.00 0.00 0.00 6.13
64 65 0.892063 ACGCCAAAATTATTGCCGGT 59.108 45.000 1.90 0.00 0.00 5.28
65 66 1.273886 ACGCCAAAATTATTGCCGGTT 59.726 42.857 1.90 0.00 0.00 4.44
66 67 1.923864 CGCCAAAATTATTGCCGGTTC 59.076 47.619 1.90 0.00 0.00 3.62
67 68 2.672478 CGCCAAAATTATTGCCGGTTCA 60.672 45.455 1.90 0.00 0.00 3.18
68 69 3.530535 GCCAAAATTATTGCCGGTTCAT 58.469 40.909 1.90 0.00 0.00 2.57
69 70 3.555547 GCCAAAATTATTGCCGGTTCATC 59.444 43.478 1.90 0.00 0.00 2.92
70 71 4.119136 CCAAAATTATTGCCGGTTCATCC 58.881 43.478 1.90 0.00 0.00 3.51
71 72 4.119136 CAAAATTATTGCCGGTTCATCCC 58.881 43.478 1.90 0.00 0.00 3.85
72 73 2.746279 ATTATTGCCGGTTCATCCCA 57.254 45.000 1.90 0.00 0.00 4.37
73 74 2.051334 TTATTGCCGGTTCATCCCAG 57.949 50.000 1.90 0.00 0.00 4.45
74 75 1.208706 TATTGCCGGTTCATCCCAGA 58.791 50.000 1.90 0.00 0.00 3.86
75 76 0.394352 ATTGCCGGTTCATCCCAGAC 60.394 55.000 1.90 0.00 0.00 3.51
76 77 2.511600 GCCGGTTCATCCCAGACG 60.512 66.667 1.90 0.00 0.00 4.18
77 78 2.186903 CCGGTTCATCCCAGACGG 59.813 66.667 0.00 0.00 35.01 4.79
78 79 2.511600 CGGTTCATCCCAGACGGC 60.512 66.667 0.00 0.00 0.00 5.68
79 80 2.668632 GGTTCATCCCAGACGGCA 59.331 61.111 0.00 0.00 0.00 5.69
80 81 1.745489 GGTTCATCCCAGACGGCAC 60.745 63.158 0.00 0.00 0.00 5.01
81 82 1.296715 GTTCATCCCAGACGGCACT 59.703 57.895 0.00 0.00 0.00 4.40
82 83 0.535335 GTTCATCCCAGACGGCACTA 59.465 55.000 0.00 0.00 0.00 2.74
83 84 1.139058 GTTCATCCCAGACGGCACTAT 59.861 52.381 0.00 0.00 0.00 2.12
84 85 1.496060 TCATCCCAGACGGCACTATT 58.504 50.000 0.00 0.00 0.00 1.73
85 86 1.837439 TCATCCCAGACGGCACTATTT 59.163 47.619 0.00 0.00 0.00 1.40
86 87 2.158957 TCATCCCAGACGGCACTATTTC 60.159 50.000 0.00 0.00 0.00 2.17
87 88 1.271856 TCCCAGACGGCACTATTTCA 58.728 50.000 0.00 0.00 0.00 2.69
88 89 1.626321 TCCCAGACGGCACTATTTCAA 59.374 47.619 0.00 0.00 0.00 2.69
89 90 2.009774 CCCAGACGGCACTATTTCAAG 58.990 52.381 0.00 0.00 0.00 3.02
90 91 1.398390 CCAGACGGCACTATTTCAAGC 59.602 52.381 0.00 0.00 0.00 4.01
91 92 2.350522 CAGACGGCACTATTTCAAGCT 58.649 47.619 0.00 0.00 0.00 3.74
92 93 2.349886 CAGACGGCACTATTTCAAGCTC 59.650 50.000 0.00 0.00 0.00 4.09
93 94 2.028112 AGACGGCACTATTTCAAGCTCA 60.028 45.455 0.00 0.00 0.00 4.26
94 95 2.939103 GACGGCACTATTTCAAGCTCAT 59.061 45.455 0.00 0.00 0.00 2.90
95 96 2.679837 ACGGCACTATTTCAAGCTCATG 59.320 45.455 0.00 0.00 0.00 3.07
96 97 2.032550 CGGCACTATTTCAAGCTCATGG 59.967 50.000 0.00 0.00 0.00 3.66
97 98 2.360165 GGCACTATTTCAAGCTCATGGG 59.640 50.000 0.00 0.00 0.00 4.00
98 99 3.282021 GCACTATTTCAAGCTCATGGGA 58.718 45.455 0.00 0.00 0.00 4.37
99 100 3.314635 GCACTATTTCAAGCTCATGGGAG 59.685 47.826 0.00 0.00 44.33 4.30
107 108 2.202932 CTCATGGGAGCCGAACGG 60.203 66.667 9.00 9.00 33.67 4.44
117 118 3.093278 CCGAACGGCTGAAGATGC 58.907 61.111 0.00 0.00 0.00 3.91
118 119 1.448540 CCGAACGGCTGAAGATGCT 60.449 57.895 0.00 0.00 0.00 3.79
119 120 1.424493 CCGAACGGCTGAAGATGCTC 61.424 60.000 0.00 0.00 0.00 4.26
120 121 0.459237 CGAACGGCTGAAGATGCTCT 60.459 55.000 0.00 0.00 0.00 4.09
121 122 1.731720 GAACGGCTGAAGATGCTCTT 58.268 50.000 0.00 0.00 39.87 2.85
122 123 2.735444 CGAACGGCTGAAGATGCTCTTA 60.735 50.000 0.00 0.00 36.73 2.10
123 124 2.593346 ACGGCTGAAGATGCTCTTAG 57.407 50.000 0.00 0.77 36.73 2.18
124 125 1.216122 CGGCTGAAGATGCTCTTAGC 58.784 55.000 0.00 12.94 36.73 3.09
125 126 1.202510 CGGCTGAAGATGCTCTTAGCT 60.203 52.381 16.68 0.00 42.97 3.32
126 127 2.741228 CGGCTGAAGATGCTCTTAGCTT 60.741 50.000 0.00 0.00 42.97 3.74
127 128 3.277715 GGCTGAAGATGCTCTTAGCTTT 58.722 45.455 0.00 0.00 42.97 3.51
128 129 3.065095 GGCTGAAGATGCTCTTAGCTTTG 59.935 47.826 0.00 0.00 42.97 2.77
129 130 3.937706 GCTGAAGATGCTCTTAGCTTTGA 59.062 43.478 0.00 0.00 42.97 2.69
130 131 4.201802 GCTGAAGATGCTCTTAGCTTTGAC 60.202 45.833 0.00 0.00 42.97 3.18
131 132 4.898320 TGAAGATGCTCTTAGCTTTGACA 58.102 39.130 0.00 0.00 42.97 3.58
132 133 4.692625 TGAAGATGCTCTTAGCTTTGACAC 59.307 41.667 0.00 0.00 42.97 3.67
133 134 3.257393 AGATGCTCTTAGCTTTGACACG 58.743 45.455 0.00 0.00 42.97 4.49
134 135 2.812358 TGCTCTTAGCTTTGACACGA 57.188 45.000 0.00 0.00 42.97 4.35
135 136 3.319137 TGCTCTTAGCTTTGACACGAT 57.681 42.857 0.00 0.00 42.97 3.73
136 137 4.450082 TGCTCTTAGCTTTGACACGATA 57.550 40.909 0.00 0.00 42.97 2.92
137 138 5.011090 TGCTCTTAGCTTTGACACGATAT 57.989 39.130 0.00 0.00 42.97 1.63
138 139 6.144078 TGCTCTTAGCTTTGACACGATATA 57.856 37.500 0.00 0.00 42.97 0.86
139 140 6.749139 TGCTCTTAGCTTTGACACGATATAT 58.251 36.000 0.00 0.00 42.97 0.86
140 141 6.863645 TGCTCTTAGCTTTGACACGATATATC 59.136 38.462 2.34 2.34 42.97 1.63
141 142 7.087639 GCTCTTAGCTTTGACACGATATATCT 58.912 38.462 10.93 0.00 38.45 1.98
142 143 7.061673 GCTCTTAGCTTTGACACGATATATCTG 59.938 40.741 10.93 10.02 38.45 2.90
218 223 0.109458 TGCACGTATTCTCGACGCTT 60.109 50.000 0.00 0.00 44.14 4.68
295 306 0.621082 CTCTTCCTTCTTCCCCACCC 59.379 60.000 0.00 0.00 0.00 4.61
314 325 2.363038 CCCCCGGCGATCGATATTTATA 59.637 50.000 21.57 0.00 42.43 0.98
335 346 2.435059 GAGCTGGAACTGACGGCC 60.435 66.667 0.00 0.00 41.10 6.13
336 347 3.959991 GAGCTGGAACTGACGGCCC 62.960 68.421 0.00 0.00 41.10 5.80
387 445 1.611491 CCGAGGCTAGGACATCTTCTC 59.389 57.143 8.08 0.00 0.00 2.87
388 446 2.582052 CGAGGCTAGGACATCTTCTCT 58.418 52.381 0.00 0.00 0.00 3.10
389 447 2.955660 CGAGGCTAGGACATCTTCTCTT 59.044 50.000 0.00 0.00 0.00 2.85
391 449 4.215109 GAGGCTAGGACATCTTCTCTTCT 58.785 47.826 0.00 0.00 0.00 2.85
392 450 5.381757 GAGGCTAGGACATCTTCTCTTCTA 58.618 45.833 0.00 0.00 0.00 2.10
394 452 4.023536 GGCTAGGACATCTTCTCTTCTACG 60.024 50.000 0.00 0.00 0.00 3.51
395 453 4.555906 GCTAGGACATCTTCTCTTCTACGC 60.556 50.000 0.00 0.00 0.00 4.42
433 493 4.430423 CGACGGCGTTCAAGCTGC 62.430 66.667 16.19 0.00 46.91 5.25
541 631 1.448013 GGCTACTTCCAGACGGTGC 60.448 63.158 0.00 0.00 0.00 5.01
564 654 4.922026 AACGCGCCGAGGTTGGTT 62.922 61.111 5.73 0.00 0.00 3.67
593 683 3.870606 GTGACCAACCACGATCCG 58.129 61.111 0.00 0.00 0.00 4.18
594 684 1.290955 GTGACCAACCACGATCCGA 59.709 57.895 0.00 0.00 0.00 4.55
595 685 0.108329 GTGACCAACCACGATCCGAT 60.108 55.000 0.00 0.00 0.00 4.18
608 698 1.001406 GATCCGATCTCCACCACATCC 59.999 57.143 0.75 0.00 0.00 3.51
609 699 0.325203 TCCGATCTCCACCACATCCA 60.325 55.000 0.00 0.00 0.00 3.41
610 700 0.105593 CCGATCTCCACCACATCCAG 59.894 60.000 0.00 0.00 0.00 3.86
611 701 0.826715 CGATCTCCACCACATCCAGT 59.173 55.000 0.00 0.00 0.00 4.00
623 713 2.603473 TCCAGTGGGAGTGGGACG 60.603 66.667 9.92 0.00 39.21 4.79
624 714 2.923035 CCAGTGGGAGTGGGACGT 60.923 66.667 0.00 0.00 35.02 4.34
625 715 2.343758 CAGTGGGAGTGGGACGTG 59.656 66.667 0.00 0.00 0.00 4.49
626 716 3.626924 AGTGGGAGTGGGACGTGC 61.627 66.667 0.00 0.00 0.00 5.34
627 717 4.699522 GTGGGAGTGGGACGTGCC 62.700 72.222 20.69 20.69 0.00 5.01
665 755 4.124351 CGCTTACGCTCGGGGACA 62.124 66.667 0.00 0.00 0.00 4.02
666 756 2.499685 GCTTACGCTCGGGGACAT 59.500 61.111 0.00 0.00 0.00 3.06
667 757 1.883084 GCTTACGCTCGGGGACATG 60.883 63.158 0.00 0.00 0.00 3.21
668 758 1.227263 CTTACGCTCGGGGACATGG 60.227 63.158 0.00 0.00 0.00 3.66
669 759 2.644555 CTTACGCTCGGGGACATGGG 62.645 65.000 0.00 0.00 0.00 4.00
772 865 4.809496 AAGGCTGCTGCGGGGATG 62.809 66.667 10.99 0.00 40.82 3.51
775 868 3.064324 GCTGCTGCGGGGATGTTT 61.064 61.111 10.99 0.00 0.00 2.83
777 870 1.675310 CTGCTGCGGGGATGTTTGA 60.675 57.895 0.00 0.00 0.00 2.69
779 872 1.212751 GCTGCGGGGATGTTTGAAC 59.787 57.895 0.00 0.00 0.00 3.18
780 873 1.501741 CTGCGGGGATGTTTGAACG 59.498 57.895 0.00 0.00 0.00 3.95
781 874 2.178273 GCGGGGATGTTTGAACGC 59.822 61.111 0.00 0.00 40.19 4.84
782 875 2.622011 GCGGGGATGTTTGAACGCA 61.622 57.895 0.00 0.00 45.57 5.24
783 876 1.501741 CGGGGATGTTTGAACGCAG 59.498 57.895 0.00 0.00 0.00 5.18
784 877 1.883021 GGGGATGTTTGAACGCAGG 59.117 57.895 0.00 0.00 0.00 4.85
786 879 0.608035 GGGATGTTTGAACGCAGGGA 60.608 55.000 0.00 0.00 0.00 4.20
787 880 0.804989 GGATGTTTGAACGCAGGGAG 59.195 55.000 0.00 0.00 0.00 4.30
788 881 1.523758 GATGTTTGAACGCAGGGAGT 58.476 50.000 0.00 0.00 0.00 3.85
789 882 2.614481 GGATGTTTGAACGCAGGGAGTA 60.614 50.000 0.00 0.00 0.00 2.59
791 884 1.270625 TGTTTGAACGCAGGGAGTAGG 60.271 52.381 0.00 0.00 0.00 3.18
793 886 2.180159 TTGAACGCAGGGAGTAGGCC 62.180 60.000 0.00 0.00 0.00 5.19
794 887 2.606519 AACGCAGGGAGTAGGCCA 60.607 61.111 5.01 0.00 0.00 5.36
795 888 2.180159 GAACGCAGGGAGTAGGCCAA 62.180 60.000 5.01 0.00 0.00 4.52
797 890 1.224592 CGCAGGGAGTAGGCCAAAT 59.775 57.895 5.01 0.00 0.00 2.32
798 891 0.815615 CGCAGGGAGTAGGCCAAATC 60.816 60.000 5.01 0.00 0.00 2.17
800 893 1.133668 GCAGGGAGTAGGCCAAATCAT 60.134 52.381 5.01 0.00 0.00 2.45
801 894 2.579873 CAGGGAGTAGGCCAAATCATG 58.420 52.381 5.01 0.00 0.00 3.07
812 2671 4.946157 AGGCCAAATCATGTTAGTCTTCTG 59.054 41.667 5.01 0.00 0.00 3.02
822 2681 9.606631 ATCATGTTAGTCTTCTGAAAATACTCC 57.393 33.333 0.00 0.00 0.00 3.85
823 2682 8.593679 TCATGTTAGTCTTCTGAAAATACTCCA 58.406 33.333 0.00 3.84 0.00 3.86
824 2683 8.660373 CATGTTAGTCTTCTGAAAATACTCCAC 58.340 37.037 3.76 4.07 0.00 4.02
825 2684 7.732025 TGTTAGTCTTCTGAAAATACTCCACA 58.268 34.615 3.76 5.90 0.00 4.17
826 2685 8.208224 TGTTAGTCTTCTGAAAATACTCCACAA 58.792 33.333 3.76 0.00 0.00 3.33
827 2686 8.496751 GTTAGTCTTCTGAAAATACTCCACAAC 58.503 37.037 3.76 1.35 0.00 3.32
829 2688 4.451096 TCTTCTGAAAATACTCCACAACGC 59.549 41.667 0.00 0.00 0.00 4.84
830 2689 3.734463 TCTGAAAATACTCCACAACGCA 58.266 40.909 0.00 0.00 0.00 5.24
831 2690 3.745975 TCTGAAAATACTCCACAACGCAG 59.254 43.478 0.00 0.00 0.00 5.18
832 2691 2.811431 TGAAAATACTCCACAACGCAGG 59.189 45.455 0.00 0.00 0.00 4.85
833 2692 1.821216 AAATACTCCACAACGCAGGG 58.179 50.000 0.00 0.00 0.00 4.45
834 2693 0.981183 AATACTCCACAACGCAGGGA 59.019 50.000 0.00 0.00 0.00 4.20
836 2695 2.743718 CTCCACAACGCAGGGAGT 59.256 61.111 0.00 0.00 42.60 3.85
837 2696 1.972198 CTCCACAACGCAGGGAGTA 59.028 57.895 0.00 0.00 42.60 2.59
838 2697 0.389948 CTCCACAACGCAGGGAGTAC 60.390 60.000 0.00 0.00 42.60 2.73
839 2698 1.116536 TCCACAACGCAGGGAGTACA 61.117 55.000 0.00 0.00 0.00 2.90
840 2699 0.250124 CCACAACGCAGGGAGTACAA 60.250 55.000 0.00 0.00 0.00 2.41
841 2700 1.588674 CACAACGCAGGGAGTACAAA 58.411 50.000 0.00 0.00 0.00 2.83
842 2701 1.531149 CACAACGCAGGGAGTACAAAG 59.469 52.381 0.00 0.00 0.00 2.77
843 2702 1.414919 ACAACGCAGGGAGTACAAAGA 59.585 47.619 0.00 0.00 0.00 2.52
844 2703 2.038557 ACAACGCAGGGAGTACAAAGAT 59.961 45.455 0.00 0.00 0.00 2.40
845 2704 2.386661 ACGCAGGGAGTACAAAGATG 57.613 50.000 0.00 0.00 0.00 2.90
846 2705 1.623811 ACGCAGGGAGTACAAAGATGT 59.376 47.619 0.00 0.00 43.74 3.06
847 2706 2.002586 CGCAGGGAGTACAAAGATGTG 58.997 52.381 0.00 0.00 40.84 3.21
848 2707 2.353704 CGCAGGGAGTACAAAGATGTGA 60.354 50.000 0.00 0.00 40.84 3.58
849 2708 3.679917 CGCAGGGAGTACAAAGATGTGAT 60.680 47.826 0.00 0.00 40.84 3.06
1011 3022 3.343421 AACGACGACGCTTTGCCC 61.343 61.111 7.30 0.00 43.96 5.36
1056 3077 1.892819 ATGACCAGCAGTAGCACGCT 61.893 55.000 0.00 0.00 45.49 5.07
1060 3081 1.080230 CAGCAGTAGCACGCTCACT 60.080 57.895 0.00 0.00 45.49 3.41
1069 3090 0.941542 GCACGCTCACTGTTACCAAA 59.058 50.000 0.00 0.00 0.00 3.28
1189 3210 2.311841 CCTTATCCAGGTGTTTTCCCCT 59.688 50.000 0.00 0.00 37.99 4.79
1297 3318 4.682334 TACCCAGTGGCCGGACGA 62.682 66.667 5.05 0.00 33.59 4.20
1421 3442 2.825836 CGCTTCCCATCCCACAGC 60.826 66.667 0.00 0.00 0.00 4.40
1579 3600 2.668280 GCAGTTTCTGACGGCGGTC 61.668 63.158 16.90 16.90 39.58 4.79
1615 3636 2.967397 CTCAAGGCACCGTCGGTA 59.033 61.111 18.38 0.00 32.11 4.02
1651 3672 2.202756 GACACGATCCCAGACGCC 60.203 66.667 0.00 0.00 0.00 5.68
1780 3801 3.782443 GCATCGACGGGGGAGGTT 61.782 66.667 0.00 0.00 0.00 3.50
2249 4270 4.065281 ACTACGTCAGGCCGCCAC 62.065 66.667 13.15 0.38 0.00 5.01
2350 4379 4.384056 CCAAGTTCGCCTAGATGATCATT 58.616 43.478 10.14 2.85 0.00 2.57
2368 4397 1.770294 TTTGCTTCCCGTTTCTTGGT 58.230 45.000 0.00 0.00 0.00 3.67
2419 4448 2.419324 AGTTGCGTTTCACGGTGTTTTA 59.581 40.909 8.17 0.00 42.82 1.52
2423 4452 5.165911 TGCGTTTCACGGTGTTTTAATAA 57.834 34.783 8.17 0.00 42.82 1.40
2425 4454 5.681982 TGCGTTTCACGGTGTTTTAATAAAG 59.318 36.000 8.17 0.00 42.82 1.85
2426 4455 5.115923 GCGTTTCACGGTGTTTTAATAAAGG 59.884 40.000 8.17 6.34 42.82 3.11
2428 4457 6.513066 CGTTTCACGGTGTTTTAATAAAGGGA 60.513 38.462 8.17 0.00 38.08 4.20
2429 4458 6.563222 TTCACGGTGTTTTAATAAAGGGAG 57.437 37.500 8.17 0.00 0.00 4.30
2430 4459 5.623169 TCACGGTGTTTTAATAAAGGGAGT 58.377 37.500 8.17 0.00 0.00 3.85
2431 4460 6.767456 TCACGGTGTTTTAATAAAGGGAGTA 58.233 36.000 8.17 0.00 0.00 2.59
2432 4461 6.650390 TCACGGTGTTTTAATAAAGGGAGTAC 59.350 38.462 8.17 0.00 0.00 2.73
2433 4462 5.939883 ACGGTGTTTTAATAAAGGGAGTACC 59.060 40.000 0.00 0.00 40.67 3.34
2466 4495 9.072375 TCATCTAGATGAGACGTAATTTGATCT 57.928 33.333 27.93 0.00 42.42 2.75
2467 4496 9.340695 CATCTAGATGAGACGTAATTTGATCTC 57.659 37.037 25.78 5.87 41.20 2.75
2473 4502 7.525688 TGAGACGTAATTTGATCTCATTCAC 57.474 36.000 9.83 0.00 41.99 3.18
2474 4503 6.253512 TGAGACGTAATTTGATCTCATTCACG 59.746 38.462 9.83 6.21 41.99 4.35
2475 4504 6.100004 AGACGTAATTTGATCTCATTCACGT 58.900 36.000 15.85 15.85 0.00 4.49
2476 4505 6.035005 AGACGTAATTTGATCTCATTCACGTG 59.965 38.462 9.94 9.94 0.00 4.49
2477 4506 5.063438 ACGTAATTTGATCTCATTCACGTGG 59.937 40.000 17.00 0.00 0.00 4.94
2478 4507 5.290885 CGTAATTTGATCTCATTCACGTGGA 59.709 40.000 17.00 7.58 0.00 4.02
2479 4508 6.183360 CGTAATTTGATCTCATTCACGTGGAA 60.183 38.462 17.00 9.21 40.46 3.53
2480 4509 6.573664 AATTTGATCTCATTCACGTGGAAA 57.426 33.333 17.00 3.61 39.39 3.13
2481 4510 6.573664 ATTTGATCTCATTCACGTGGAAAA 57.426 33.333 17.00 2.78 39.39 2.29
2482 4511 5.356882 TTGATCTCATTCACGTGGAAAAC 57.643 39.130 17.00 1.30 39.39 2.43
2483 4512 4.384940 TGATCTCATTCACGTGGAAAACA 58.615 39.130 17.00 3.87 39.39 2.83
2484 4513 4.819088 TGATCTCATTCACGTGGAAAACAA 59.181 37.500 17.00 1.11 39.39 2.83
2485 4514 4.811555 TCTCATTCACGTGGAAAACAAG 57.188 40.909 17.00 4.44 39.39 3.16
2486 4515 4.447290 TCTCATTCACGTGGAAAACAAGA 58.553 39.130 17.00 6.62 39.39 3.02
2487 4516 5.063204 TCTCATTCACGTGGAAAACAAGAT 58.937 37.500 17.00 0.00 39.39 2.40
2488 4517 5.179368 TCTCATTCACGTGGAAAACAAGATC 59.821 40.000 17.00 0.00 39.39 2.75
2489 4518 3.870723 TTCACGTGGAAAACAAGATCG 57.129 42.857 17.00 0.00 30.98 3.69
2490 4519 2.139917 TCACGTGGAAAACAAGATCGG 58.860 47.619 17.00 0.00 32.54 4.18
2491 4520 2.139917 CACGTGGAAAACAAGATCGGA 58.860 47.619 7.95 0.00 32.54 4.55
2492 4521 2.742053 CACGTGGAAAACAAGATCGGAT 59.258 45.455 7.95 0.00 32.54 4.18
2493 4522 3.930229 CACGTGGAAAACAAGATCGGATA 59.070 43.478 7.95 0.00 32.54 2.59
2494 4523 3.930848 ACGTGGAAAACAAGATCGGATAC 59.069 43.478 0.00 0.00 32.54 2.24
2495 4524 3.930229 CGTGGAAAACAAGATCGGATACA 59.070 43.478 0.00 0.00 0.00 2.29
2496 4525 4.390603 CGTGGAAAACAAGATCGGATACAA 59.609 41.667 0.00 0.00 0.00 2.41
2497 4526 5.628134 GTGGAAAACAAGATCGGATACAAC 58.372 41.667 0.00 0.00 0.00 3.32
2498 4527 4.698304 TGGAAAACAAGATCGGATACAACC 59.302 41.667 0.00 0.00 0.00 3.77
2499 4528 4.095932 GGAAAACAAGATCGGATACAACCC 59.904 45.833 0.00 0.00 0.00 4.11
2500 4529 3.992943 AACAAGATCGGATACAACCCA 57.007 42.857 0.00 0.00 0.00 4.51
2501 4530 4.503714 AACAAGATCGGATACAACCCAT 57.496 40.909 0.00 0.00 0.00 4.00
2502 4531 3.808728 ACAAGATCGGATACAACCCATG 58.191 45.455 0.00 0.00 0.00 3.66
2503 4532 3.199946 ACAAGATCGGATACAACCCATGT 59.800 43.478 0.00 0.00 46.36 3.21
2504 4533 4.199310 CAAGATCGGATACAACCCATGTT 58.801 43.478 0.00 0.00 43.63 2.71
2505 4534 5.104693 ACAAGATCGGATACAACCCATGTTA 60.105 40.000 0.00 0.00 43.63 2.41
2506 4535 5.215252 AGATCGGATACAACCCATGTTAG 57.785 43.478 0.00 0.00 43.63 2.34
2507 4536 3.188159 TCGGATACAACCCATGTTAGC 57.812 47.619 0.00 0.00 43.63 3.09
2508 4537 2.502130 TCGGATACAACCCATGTTAGCA 59.498 45.455 0.00 0.00 43.63 3.49
2509 4538 2.612212 CGGATACAACCCATGTTAGCAC 59.388 50.000 0.00 0.00 43.63 4.40
2510 4539 3.616219 GGATACAACCCATGTTAGCACA 58.384 45.455 0.00 0.00 43.63 4.57
2511 4540 3.377172 GGATACAACCCATGTTAGCACAC 59.623 47.826 0.00 0.00 43.63 3.82
2512 4541 2.356665 ACAACCCATGTTAGCACACA 57.643 45.000 0.00 0.00 40.06 3.72
2513 4542 2.875296 ACAACCCATGTTAGCACACAT 58.125 42.857 0.00 0.00 40.06 3.21
2514 4543 4.027674 ACAACCCATGTTAGCACACATA 57.972 40.909 0.76 0.00 40.06 2.29
2515 4544 4.599041 ACAACCCATGTTAGCACACATAT 58.401 39.130 0.76 0.00 40.06 1.78
2516 4545 4.640201 ACAACCCATGTTAGCACACATATC 59.360 41.667 0.76 0.00 40.06 1.63
2517 4546 4.778213 ACCCATGTTAGCACACATATCT 57.222 40.909 0.76 0.00 35.51 1.98
2518 4547 5.116084 ACCCATGTTAGCACACATATCTT 57.884 39.130 0.76 0.00 35.51 2.40
2519 4548 6.247229 ACCCATGTTAGCACACATATCTTA 57.753 37.500 0.76 0.00 35.51 2.10
2520 4549 6.841601 ACCCATGTTAGCACACATATCTTAT 58.158 36.000 0.76 0.00 35.51 1.73
2521 4550 7.973402 ACCCATGTTAGCACACATATCTTATA 58.027 34.615 0.76 0.00 35.51 0.98
2522 4551 8.097038 ACCCATGTTAGCACACATATCTTATAG 58.903 37.037 0.76 0.00 35.51 1.31
2523 4552 7.065085 CCCATGTTAGCACACATATCTTATAGC 59.935 40.741 0.76 0.00 35.51 2.97
2524 4553 7.603784 CCATGTTAGCACACATATCTTATAGCA 59.396 37.037 0.76 0.00 35.51 3.49
2525 4554 9.159364 CATGTTAGCACACATATCTTATAGCAT 57.841 33.333 0.76 0.00 35.51 3.79
2526 4555 8.763049 TGTTAGCACACATATCTTATAGCATC 57.237 34.615 0.00 0.00 0.00 3.91
2527 4556 8.367156 TGTTAGCACACATATCTTATAGCATCA 58.633 33.333 0.00 0.00 0.00 3.07
2528 4557 8.651588 GTTAGCACACATATCTTATAGCATCAC 58.348 37.037 0.00 0.00 0.00 3.06
2529 4558 6.762333 AGCACACATATCTTATAGCATCACA 58.238 36.000 0.00 0.00 0.00 3.58
2530 4559 7.392418 AGCACACATATCTTATAGCATCACAT 58.608 34.615 0.00 0.00 0.00 3.21
2531 4560 7.548427 AGCACACATATCTTATAGCATCACATC 59.452 37.037 0.00 0.00 0.00 3.06
2532 4561 7.201591 GCACACATATCTTATAGCATCACATCC 60.202 40.741 0.00 0.00 0.00 3.51
2533 4562 7.820872 CACACATATCTTATAGCATCACATCCA 59.179 37.037 0.00 0.00 0.00 3.41
2534 4563 8.377799 ACACATATCTTATAGCATCACATCCAA 58.622 33.333 0.00 0.00 0.00 3.53
2535 4564 9.392259 CACATATCTTATAGCATCACATCCAAT 57.608 33.333 0.00 0.00 0.00 3.16
2536 4565 9.392259 ACATATCTTATAGCATCACATCCAATG 57.608 33.333 0.00 0.00 0.00 2.82
2537 4566 9.609346 CATATCTTATAGCATCACATCCAATGA 57.391 33.333 0.00 0.00 0.00 2.57
2538 4567 7.918536 ATCTTATAGCATCACATCCAATGAC 57.081 36.000 0.00 0.00 0.00 3.06
2539 4568 7.071069 TCTTATAGCATCACATCCAATGACT 57.929 36.000 0.00 0.00 0.00 3.41
2540 4569 8.193953 TCTTATAGCATCACATCCAATGACTA 57.806 34.615 0.00 0.00 0.00 2.59
2541 4570 8.819845 TCTTATAGCATCACATCCAATGACTAT 58.180 33.333 0.00 0.00 32.32 2.12
2545 4574 9.797642 ATAGCATCACATCCAATGACTATAAAA 57.202 29.630 0.00 0.00 0.00 1.52
2546 4575 8.162878 AGCATCACATCCAATGACTATAAAAG 57.837 34.615 0.00 0.00 0.00 2.27
2547 4576 7.230108 AGCATCACATCCAATGACTATAAAAGG 59.770 37.037 0.00 0.00 0.00 3.11
2548 4577 7.013655 GCATCACATCCAATGACTATAAAAGGT 59.986 37.037 0.00 0.00 0.00 3.50
2549 4578 7.864108 TCACATCCAATGACTATAAAAGGTG 57.136 36.000 0.00 0.00 0.00 4.00
2550 4579 7.629157 TCACATCCAATGACTATAAAAGGTGA 58.371 34.615 0.00 0.00 0.00 4.02
2551 4580 8.106462 TCACATCCAATGACTATAAAAGGTGAA 58.894 33.333 0.00 0.00 0.00 3.18
2552 4581 8.906867 CACATCCAATGACTATAAAAGGTGAAT 58.093 33.333 0.00 0.00 0.00 2.57
2553 4582 8.906867 ACATCCAATGACTATAAAAGGTGAATG 58.093 33.333 0.00 0.00 0.00 2.67
2554 4583 9.123902 CATCCAATGACTATAAAAGGTGAATGA 57.876 33.333 0.00 0.00 0.00 2.57
2555 4584 8.737168 TCCAATGACTATAAAAGGTGAATGAG 57.263 34.615 0.00 0.00 0.00 2.90
2556 4585 8.548025 TCCAATGACTATAAAAGGTGAATGAGA 58.452 33.333 0.00 0.00 0.00 3.27
2557 4586 8.616076 CCAATGACTATAAAAGGTGAATGAGAC 58.384 37.037 0.00 0.00 0.00 3.36
2558 4587 8.616076 CAATGACTATAAAAGGTGAATGAGACC 58.384 37.037 0.00 0.00 0.00 3.85
2559 4588 7.252612 TGACTATAAAAGGTGAATGAGACCA 57.747 36.000 0.00 0.00 35.76 4.02
2560 4589 7.685481 TGACTATAAAAGGTGAATGAGACCAA 58.315 34.615 0.00 0.00 35.76 3.67
2561 4590 8.160765 TGACTATAAAAGGTGAATGAGACCAAA 58.839 33.333 0.00 0.00 35.76 3.28
2562 4591 9.178758 GACTATAAAAGGTGAATGAGACCAAAT 57.821 33.333 0.00 0.00 35.76 2.32
2563 4592 9.533831 ACTATAAAAGGTGAATGAGACCAAATT 57.466 29.630 0.00 0.00 35.76 1.82
2568 4597 9.710900 AAAAGGTGAATGAGACCAAATTAAATC 57.289 29.630 0.00 0.00 35.76 2.17
2569 4598 8.655935 AAGGTGAATGAGACCAAATTAAATCT 57.344 30.769 0.00 0.00 35.76 2.40
2570 4599 8.286191 AGGTGAATGAGACCAAATTAAATCTC 57.714 34.615 0.00 6.03 38.46 2.75
2594 4623 8.846943 TCATCTAGATGAGTTTTAGCAAAACA 57.153 30.769 27.93 3.72 44.21 2.83
2595 4624 8.939929 TCATCTAGATGAGTTTTAGCAAAACAG 58.060 33.333 27.93 11.18 44.21 3.16
2613 4642 9.364110 GCAAAACAGTTTAATAAAATGGAAACG 57.636 29.630 16.05 3.72 40.51 3.60
2620 4649 9.915629 AGTTTAATAAAATGGAAACGTATTGCA 57.084 25.926 7.01 7.01 36.98 4.08
2625 4654 6.720012 AAAATGGAAACGTATTGCATTTCC 57.280 33.333 26.38 18.02 45.38 3.13
2629 4658 5.054390 GGAAACGTATTGCATTTCCTTCA 57.946 39.130 17.71 0.00 45.31 3.02
2665 4694 1.337118 AAACATGGCCCATTGAACGT 58.663 45.000 0.00 0.00 0.00 3.99
2691 4720 6.949578 TTTTAGGGTAAATTACGTGTCGAG 57.050 37.500 0.00 0.00 0.00 4.04
2692 4721 2.884827 AGGGTAAATTACGTGTCGAGC 58.115 47.619 0.00 0.00 0.00 5.03
2693 4722 1.929169 GGGTAAATTACGTGTCGAGCC 59.071 52.381 0.00 0.00 0.00 4.70
2694 4723 2.417787 GGGTAAATTACGTGTCGAGCCT 60.418 50.000 0.00 0.00 0.00 4.58
2695 4724 2.601763 GGTAAATTACGTGTCGAGCCTG 59.398 50.000 0.00 0.00 0.00 4.85
2696 4725 2.736144 AAATTACGTGTCGAGCCTGA 57.264 45.000 0.00 0.00 0.00 3.86
2697 4726 1.992170 AATTACGTGTCGAGCCTGAC 58.008 50.000 0.00 0.00 39.37 3.51
2698 4727 0.179171 ATTACGTGTCGAGCCTGACG 60.179 55.000 0.00 0.00 41.87 4.35
2699 4728 2.191354 TTACGTGTCGAGCCTGACGG 62.191 60.000 0.00 0.00 41.87 4.79
2700 4729 4.039357 CGTGTCGAGCCTGACGGT 62.039 66.667 0.00 0.00 41.87 4.83
2707 4736 1.822990 TCGAGCCTGACGGTAAATTCT 59.177 47.619 0.00 0.00 0.00 2.40
2760 4797 4.210120 GCTACTCGTAATTTGCCATCTGAG 59.790 45.833 0.00 0.00 0.00 3.35
2769 4806 3.333029 TTGCCATCTGAGAATGTTCGA 57.667 42.857 0.00 0.00 0.00 3.71
2778 4815 6.594284 TCTGAGAATGTTCGATTTGCTATG 57.406 37.500 0.00 0.00 0.00 2.23
2781 4818 5.007039 TGAGAATGTTCGATTTGCTATGCTC 59.993 40.000 0.00 0.00 0.00 4.26
2792 4830 6.748658 CGATTTGCTATGCTCAAAAATCTGAA 59.251 34.615 0.00 0.00 37.04 3.02
2795 4833 6.579666 TGCTATGCTCAAAAATCTGAAGTT 57.420 33.333 0.00 0.00 0.00 2.66
2796 4834 7.686438 TGCTATGCTCAAAAATCTGAAGTTA 57.314 32.000 0.00 0.00 0.00 2.24
2826 4868 9.665719 TTTTAGCATTGAGTACATATCTTGTGA 57.334 29.630 0.00 0.00 39.48 3.58
2844 4890 5.703978 TGTGAAAACCATACATTCAGTGG 57.296 39.130 0.00 0.00 38.96 4.00
2852 4898 4.706476 ACCATACATTCAGTGGAAACATGG 59.294 41.667 0.00 10.55 46.14 3.66
2866 4912 5.010922 TGGAAACATGGAAACTTCATCTTGG 59.989 40.000 0.00 0.00 33.40 3.61
2873 4919 3.058224 GGAAACTTCATCTTGGTCCGTTG 60.058 47.826 0.00 0.00 0.00 4.10
2878 4924 4.019681 ACTTCATCTTGGTCCGTTGGATAA 60.020 41.667 0.00 0.00 32.73 1.75
2887 4933 4.007659 GGTCCGTTGGATAAAGAATGTGT 58.992 43.478 0.00 0.00 32.73 3.72
2903 4949 3.713858 TGTGTGTTGCCTGATGAAAAG 57.286 42.857 0.00 0.00 0.00 2.27
2904 4950 2.223782 TGTGTGTTGCCTGATGAAAAGC 60.224 45.455 0.00 0.00 0.00 3.51
2921 4967 7.551035 TGAAAAGCTGTACAAATTGCAAATT 57.449 28.000 1.71 0.00 0.00 1.82
2922 4968 7.983307 TGAAAAGCTGTACAAATTGCAAATTT 58.017 26.923 1.71 2.09 0.00 1.82
2923 4969 7.909121 TGAAAAGCTGTACAAATTGCAAATTTG 59.091 29.630 22.07 22.07 42.81 2.32
2939 4985 6.232139 CAAATTTGCCCTCTGAAAATGTTC 57.768 37.500 5.01 0.00 0.00 3.18
2941 4987 2.559698 TGCCCTCTGAAAATGTTCGA 57.440 45.000 0.00 0.00 36.46 3.71
2942 4988 3.071874 TGCCCTCTGAAAATGTTCGAT 57.928 42.857 0.00 0.00 36.46 3.59
2943 4989 3.420893 TGCCCTCTGAAAATGTTCGATT 58.579 40.909 0.00 0.00 36.46 3.34
2945 4991 4.168760 GCCCTCTGAAAATGTTCGATTTG 58.831 43.478 0.00 0.00 36.46 2.32
2947 4993 4.321156 CCCTCTGAAAATGTTCGATTTGCA 60.321 41.667 0.00 0.00 36.46 4.08
2948 4994 5.221880 CCTCTGAAAATGTTCGATTTGCAA 58.778 37.500 0.00 0.00 36.46 4.08
2950 4996 6.183360 CCTCTGAAAATGTTCGATTTGCAATG 60.183 38.462 0.00 0.00 36.46 2.82
2951 4997 5.634439 TCTGAAAATGTTCGATTTGCAATGG 59.366 36.000 0.00 0.00 36.46 3.16
2952 4998 5.295950 TGAAAATGTTCGATTTGCAATGGT 58.704 33.333 0.00 0.00 36.46 3.55
2953 4999 5.757320 TGAAAATGTTCGATTTGCAATGGTT 59.243 32.000 0.00 0.00 36.46 3.67
2956 5002 7.721286 AAATGTTCGATTTGCAATGGTTAAA 57.279 28.000 0.00 0.00 0.00 1.52
2957 5003 6.949578 ATGTTCGATTTGCAATGGTTAAAG 57.050 33.333 0.00 0.00 0.00 1.85
2959 5005 6.507900 TGTTCGATTTGCAATGGTTAAAGAA 58.492 32.000 0.00 0.00 0.00 2.52
2960 5006 7.151308 TGTTCGATTTGCAATGGTTAAAGAAT 58.849 30.769 0.00 0.00 0.00 2.40
2962 5008 7.156876 TCGATTTGCAATGGTTAAAGAATCT 57.843 32.000 0.00 0.00 0.00 2.40
2965 5011 7.008628 CGATTTGCAATGGTTAAAGAATCTGAC 59.991 37.037 0.00 0.00 0.00 3.51
2967 5013 4.759693 TGCAATGGTTAAAGAATCTGACGT 59.240 37.500 0.00 0.00 0.00 4.34
2968 5014 5.106712 TGCAATGGTTAAAGAATCTGACGTC 60.107 40.000 9.11 9.11 0.00 4.34
2971 5017 3.256383 TGGTTAAAGAATCTGACGTCGGA 59.744 43.478 28.31 28.31 35.43 4.55
2980 5026 0.953471 CTGACGTCGGATTTTGGGCA 60.953 55.000 20.01 0.00 0.00 5.36
2985 6631 2.036604 ACGTCGGATTTTGGGCATTTTT 59.963 40.909 0.00 0.00 0.00 1.94
3036 6682 1.686587 TGAGACACGTGACCACATTCT 59.313 47.619 25.01 12.62 0.00 2.40
3037 6683 2.288213 TGAGACACGTGACCACATTCTC 60.288 50.000 25.01 20.78 33.84 2.87
3046 6692 1.929836 GACCACATTCTCTGTCGATGC 59.070 52.381 0.00 0.00 35.29 3.91
3047 6693 1.276138 ACCACATTCTCTGTCGATGCA 59.724 47.619 0.00 0.00 35.29 3.96
3048 6694 1.931841 CCACATTCTCTGTCGATGCAG 59.068 52.381 0.00 0.00 35.29 4.41
3049 6695 2.417787 CCACATTCTCTGTCGATGCAGA 60.418 50.000 5.69 5.69 42.56 4.26
3061 6709 2.011947 CGATGCAGAGGCTCAATTTCA 58.988 47.619 18.26 6.93 41.91 2.69
3085 6733 3.251729 CGAGAAGCAATTGGGGTATCATG 59.748 47.826 7.72 0.00 0.00 3.07
3095 6743 2.652348 TGGGGTATCATGGAAACCAACT 59.348 45.455 12.24 0.00 36.95 3.16
3105 6753 1.341209 GGAAACCAACTGGCTTTCTGG 59.659 52.381 16.46 0.00 39.32 3.86
3110 6758 4.112634 ACCAACTGGCTTTCTGGATTTA 57.887 40.909 0.00 0.00 39.32 1.40
3121 6769 6.259829 GGCTTTCTGGATTTACATTCTCTCTC 59.740 42.308 0.00 0.00 0.00 3.20
3123 6771 7.552330 GCTTTCTGGATTTACATTCTCTCTCTT 59.448 37.037 0.00 0.00 0.00 2.85
3188 6836 9.561069 AATCAAAGTACAAGTCATGTAAAGACT 57.439 29.630 0.00 0.00 45.81 3.24
3192 6840 7.050970 AGTACAAGTCATGTAAAGACTGACA 57.949 36.000 0.00 0.00 45.81 3.58
3194 6842 8.803235 AGTACAAGTCATGTAAAGACTGACATA 58.197 33.333 0.00 0.00 45.81 2.29
3203 6851 9.385902 CATGTAAAGACTGACATAACAAAACTG 57.614 33.333 3.55 0.00 34.52 3.16
3213 6861 9.282247 CTGACATAACAAAACTGAAATGATAGC 57.718 33.333 0.00 0.00 0.00 2.97
3239 6887 4.130118 ACATCTCTGAGTTTGACACCAAC 58.870 43.478 14.28 0.00 30.88 3.77
3241 6889 1.261619 CTCTGAGTTTGACACCAACGC 59.738 52.381 0.00 0.00 30.88 4.84
3242 6890 0.307760 CTGAGTTTGACACCAACGCC 59.692 55.000 0.00 0.00 30.88 5.68
3248 6896 2.358247 GACACCAACGCCCGTCAT 60.358 61.111 0.00 0.00 0.00 3.06
3249 6897 2.358247 ACACCAACGCCCGTCATC 60.358 61.111 0.00 0.00 0.00 2.92
3251 6899 1.216977 CACCAACGCCCGTCATCTA 59.783 57.895 0.00 0.00 0.00 1.98
3252 6900 0.179084 CACCAACGCCCGTCATCTAT 60.179 55.000 0.00 0.00 0.00 1.98
3253 6901 0.104304 ACCAACGCCCGTCATCTATC 59.896 55.000 0.00 0.00 0.00 2.08
3258 6906 1.235281 CGCCCGTCATCTATCTCCGA 61.235 60.000 0.00 0.00 0.00 4.55
3265 6913 2.952978 GTCATCTATCTCCGACACCACT 59.047 50.000 0.00 0.00 0.00 4.00
3272 6920 0.109086 CTCCGACACCACTACAGCAG 60.109 60.000 0.00 0.00 0.00 4.24
3280 6928 1.237285 CCACTACAGCAGCCACCAAC 61.237 60.000 0.00 0.00 0.00 3.77
3281 6929 1.301716 ACTACAGCAGCCACCAACG 60.302 57.895 0.00 0.00 0.00 4.10
3283 6931 1.005037 TACAGCAGCCACCAACGAG 60.005 57.895 0.00 0.00 0.00 4.18
3286 6934 1.148273 AGCAGCCACCAACGAGAAA 59.852 52.632 0.00 0.00 0.00 2.52
3289 6937 1.000274 GCAGCCACCAACGAGAAAAAT 60.000 47.619 0.00 0.00 0.00 1.82
3292 6940 4.226761 CAGCCACCAACGAGAAAAATAAC 58.773 43.478 0.00 0.00 0.00 1.89
3293 6941 3.058501 AGCCACCAACGAGAAAAATAACG 60.059 43.478 0.00 0.00 0.00 3.18
3296 6944 4.155280 CCACCAACGAGAAAAATAACGGAT 59.845 41.667 0.00 0.00 0.00 4.18
3297 6945 5.321516 CACCAACGAGAAAAATAACGGATC 58.678 41.667 0.00 0.00 0.00 3.36
3298 6946 4.998672 ACCAACGAGAAAAATAACGGATCA 59.001 37.500 0.00 0.00 0.00 2.92
3299 6947 5.106830 ACCAACGAGAAAAATAACGGATCAC 60.107 40.000 0.00 0.00 0.00 3.06
3301 6949 4.571919 ACGAGAAAAATAACGGATCACCA 58.428 39.130 0.00 0.00 35.59 4.17
3302 6950 5.183228 ACGAGAAAAATAACGGATCACCAT 58.817 37.500 0.00 0.00 35.59 3.55
3303 6951 5.293569 ACGAGAAAAATAACGGATCACCATC 59.706 40.000 0.00 0.00 35.59 3.51
3304 6952 5.556382 CGAGAAAAATAACGGATCACCATCG 60.556 44.000 0.00 0.00 35.59 3.84
3305 6953 3.963383 AAAATAACGGATCACCATCGC 57.037 42.857 0.00 0.00 35.59 4.58
3306 6954 2.910688 AATAACGGATCACCATCGCT 57.089 45.000 0.00 0.00 35.59 4.93
3307 6955 4.330944 AAATAACGGATCACCATCGCTA 57.669 40.909 0.00 0.00 35.59 4.26
3308 6956 4.330944 AATAACGGATCACCATCGCTAA 57.669 40.909 0.00 0.00 35.59 3.09
3309 6957 2.225068 AACGGATCACCATCGCTAAG 57.775 50.000 0.00 0.00 35.59 2.18
3310 6958 0.389391 ACGGATCACCATCGCTAAGG 59.611 55.000 0.00 0.00 35.59 2.69
3311 6959 0.946221 CGGATCACCATCGCTAAGGC 60.946 60.000 0.00 0.00 35.59 4.35
3332 6980 1.354040 ACGAGAGTACTGTACGACCG 58.646 55.000 19.22 19.22 46.88 4.79
3333 6981 0.026027 CGAGAGTACTGTACGACCGC 59.974 60.000 11.97 6.93 0.00 5.68
3334 6982 0.376502 GAGAGTACTGTACGACCGCC 59.623 60.000 11.97 0.31 0.00 6.13
3335 6983 0.035630 AGAGTACTGTACGACCGCCT 60.036 55.000 11.97 2.33 0.00 5.52
3336 6984 0.376502 GAGTACTGTACGACCGCCTC 59.623 60.000 11.97 0.00 0.00 4.70
3337 6985 1.028868 AGTACTGTACGACCGCCTCC 61.029 60.000 11.97 0.00 0.00 4.30
3338 6986 2.108514 TACTGTACGACCGCCTCCG 61.109 63.158 0.00 0.00 0.00 4.63
3339 6987 2.520465 TACTGTACGACCGCCTCCGA 62.520 60.000 0.00 0.00 36.29 4.55
3340 6988 3.392595 CTGTACGACCGCCTCCGAC 62.393 68.421 0.00 0.00 36.29 4.79
3341 6989 4.527157 GTACGACCGCCTCCGACG 62.527 72.222 0.00 0.00 38.89 5.12
3365 7013 3.330720 CCTCCTCCCTTGCCCGTT 61.331 66.667 0.00 0.00 0.00 4.44
3366 7014 2.045926 CTCCTCCCTTGCCCGTTG 60.046 66.667 0.00 0.00 0.00 4.10
3367 7015 4.344865 TCCTCCCTTGCCCGTTGC 62.345 66.667 0.00 0.00 41.77 4.17
3372 7020 2.978010 CCTTGCCCGTTGCGTCTT 60.978 61.111 0.00 0.00 45.60 3.01
3373 7021 2.252260 CTTGCCCGTTGCGTCTTG 59.748 61.111 0.00 0.00 45.60 3.02
3374 7022 3.879351 CTTGCCCGTTGCGTCTTGC 62.879 63.158 0.00 0.00 45.60 4.01
3401 7049 3.798650 CGCGCGCCTCCAATTCAA 61.799 61.111 27.72 0.00 0.00 2.69
3402 7050 2.100991 GCGCGCCTCCAATTCAAG 59.899 61.111 23.24 0.00 0.00 3.02
3403 7051 2.100991 CGCGCCTCCAATTCAAGC 59.899 61.111 0.00 0.00 0.00 4.01
3405 7053 3.578456 CGCCTCCAATTCAAGCGT 58.422 55.556 0.00 0.00 41.78 5.07
3406 7054 1.135315 CGCCTCCAATTCAAGCGTG 59.865 57.895 0.00 0.00 41.78 5.34
3407 7055 1.508088 GCCTCCAATTCAAGCGTGG 59.492 57.895 0.00 0.00 0.00 4.94
3408 7056 1.937546 GCCTCCAATTCAAGCGTGGG 61.938 60.000 0.00 0.00 32.95 4.61
3409 7057 1.508088 CTCCAATTCAAGCGTGGGC 59.492 57.895 0.00 0.00 40.37 5.36
3410 7058 2.179018 CCAATTCAAGCGTGGGCG 59.821 61.111 0.00 0.00 46.35 6.13
3411 7059 2.625823 CCAATTCAAGCGTGGGCGT 61.626 57.895 0.00 0.00 46.35 5.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.464452 CCCATAGGTCGTTCCCAGAC 59.536 60.000 0.00 0.00 36.75 3.51
1 2 1.335132 GCCCATAGGTCGTTCCCAGA 61.335 60.000 0.00 0.00 36.75 3.86
2 3 1.146263 GCCCATAGGTCGTTCCCAG 59.854 63.158 0.00 0.00 36.75 4.45
3 4 2.727392 CGCCCATAGGTCGTTCCCA 61.727 63.158 0.00 0.00 36.75 4.37
4 5 1.755393 ATCGCCCATAGGTCGTTCCC 61.755 60.000 0.00 0.00 36.75 3.97
5 6 0.600255 CATCGCCCATAGGTCGTTCC 60.600 60.000 0.00 0.00 35.18 3.62
6 7 0.600255 CCATCGCCCATAGGTCGTTC 60.600 60.000 0.00 0.00 35.18 3.95
8 9 3.138625 CCATCGCCCATAGGTCGT 58.861 61.111 0.00 0.00 35.18 4.34
9 10 2.357517 GCCATCGCCCATAGGTCG 60.358 66.667 0.00 0.00 35.01 4.79
10 11 1.302033 CAGCCATCGCCCATAGGTC 60.302 63.158 0.00 0.00 34.57 3.85
11 12 2.822637 CCAGCCATCGCCCATAGGT 61.823 63.158 0.00 0.00 34.57 3.08
12 13 2.033141 CCAGCCATCGCCCATAGG 59.967 66.667 0.00 0.00 34.57 2.57
13 14 0.886490 GTTCCAGCCATCGCCCATAG 60.886 60.000 0.00 0.00 34.57 2.23
14 15 1.148273 GTTCCAGCCATCGCCCATA 59.852 57.895 0.00 0.00 34.57 2.74
15 16 2.124151 GTTCCAGCCATCGCCCAT 60.124 61.111 0.00 0.00 34.57 4.00
16 17 4.424711 GGTTCCAGCCATCGCCCA 62.425 66.667 0.00 0.00 34.57 5.36
18 19 3.936772 TTGGGTTCCAGCCATCGCC 62.937 63.158 0.00 0.00 46.30 5.54
19 20 1.728490 GATTGGGTTCCAGCCATCGC 61.728 60.000 0.00 0.00 46.30 4.58
20 21 1.439353 CGATTGGGTTCCAGCCATCG 61.439 60.000 10.33 10.33 46.30 3.84
21 22 1.103398 CCGATTGGGTTCCAGCCATC 61.103 60.000 0.00 0.00 46.30 3.51
22 23 1.076777 CCGATTGGGTTCCAGCCAT 60.077 57.895 0.00 0.00 46.30 4.40
23 24 2.354729 CCGATTGGGTTCCAGCCA 59.645 61.111 0.00 0.00 45.25 4.75
24 25 3.140814 GCCGATTGGGTTCCAGCC 61.141 66.667 0.00 0.00 38.44 4.85
25 26 3.140814 GGCCGATTGGGTTCCAGC 61.141 66.667 0.00 0.00 38.44 4.85
26 27 2.440247 GGGCCGATTGGGTTCCAG 60.440 66.667 0.00 0.00 38.44 3.86
27 28 4.055227 GGGGCCGATTGGGTTCCA 62.055 66.667 0.00 0.00 38.44 3.53
28 29 4.055227 TGGGGCCGATTGGGTTCC 62.055 66.667 0.00 0.00 38.44 3.62
29 30 2.754254 GTGGGGCCGATTGGGTTC 60.754 66.667 0.00 0.00 38.44 3.62
30 31 4.733542 CGTGGGGCCGATTGGGTT 62.734 66.667 0.00 0.00 38.44 4.11
40 41 1.650825 CAATAATTTTGGCGTGGGGC 58.349 50.000 0.00 0.00 42.51 5.80
41 42 1.650825 GCAATAATTTTGGCGTGGGG 58.349 50.000 0.00 0.00 0.00 4.96
42 43 1.650825 GGCAATAATTTTGGCGTGGG 58.349 50.000 9.80 0.00 35.30 4.61
47 48 2.966050 TGAACCGGCAATAATTTTGGC 58.034 42.857 0.00 13.30 41.00 4.52
48 49 4.119136 GGATGAACCGGCAATAATTTTGG 58.881 43.478 0.00 0.00 0.00 3.28
49 50 4.119136 GGGATGAACCGGCAATAATTTTG 58.881 43.478 0.00 0.00 40.11 2.44
50 51 3.772025 TGGGATGAACCGGCAATAATTTT 59.228 39.130 0.00 0.00 40.11 1.82
51 52 3.370104 TGGGATGAACCGGCAATAATTT 58.630 40.909 0.00 0.00 40.11 1.82
52 53 2.958355 CTGGGATGAACCGGCAATAATT 59.042 45.455 0.00 0.00 40.11 1.40
53 54 2.174639 TCTGGGATGAACCGGCAATAAT 59.825 45.455 0.00 0.00 40.11 1.28
54 55 1.562008 TCTGGGATGAACCGGCAATAA 59.438 47.619 0.00 0.00 40.11 1.40
55 56 1.134220 GTCTGGGATGAACCGGCAATA 60.134 52.381 0.00 0.00 40.11 1.90
56 57 0.394352 GTCTGGGATGAACCGGCAAT 60.394 55.000 0.00 0.00 40.11 3.56
57 58 1.002624 GTCTGGGATGAACCGGCAA 60.003 57.895 0.00 0.00 40.11 4.52
58 59 2.668632 GTCTGGGATGAACCGGCA 59.331 61.111 0.00 0.00 40.11 5.69
59 60 2.511600 CGTCTGGGATGAACCGGC 60.512 66.667 0.00 0.00 40.11 6.13
60 61 2.186903 CCGTCTGGGATGAACCGG 59.813 66.667 0.00 0.00 40.11 5.28
61 62 2.511600 GCCGTCTGGGATGAACCG 60.512 66.667 0.00 0.00 40.11 4.44
62 63 1.745489 GTGCCGTCTGGGATGAACC 60.745 63.158 0.00 0.00 38.18 3.62
63 64 0.535335 TAGTGCCGTCTGGGATGAAC 59.465 55.000 0.00 0.00 38.18 3.18
64 65 1.496060 ATAGTGCCGTCTGGGATGAA 58.504 50.000 0.00 0.00 38.18 2.57
65 66 1.496060 AATAGTGCCGTCTGGGATGA 58.504 50.000 0.00 0.00 38.18 2.92
66 67 2.213499 GAAATAGTGCCGTCTGGGATG 58.787 52.381 0.00 0.00 38.18 3.51
67 68 1.837439 TGAAATAGTGCCGTCTGGGAT 59.163 47.619 0.00 0.00 38.18 3.85
68 69 1.271856 TGAAATAGTGCCGTCTGGGA 58.728 50.000 0.00 0.00 38.47 4.37
69 70 2.009774 CTTGAAATAGTGCCGTCTGGG 58.990 52.381 0.00 0.00 39.58 4.45
70 71 1.398390 GCTTGAAATAGTGCCGTCTGG 59.602 52.381 0.00 0.00 38.77 3.86
71 72 2.349886 GAGCTTGAAATAGTGCCGTCTG 59.650 50.000 0.00 0.00 0.00 3.51
72 73 2.028112 TGAGCTTGAAATAGTGCCGTCT 60.028 45.455 0.00 0.00 0.00 4.18
73 74 2.346803 TGAGCTTGAAATAGTGCCGTC 58.653 47.619 0.00 0.00 0.00 4.79
74 75 2.472695 TGAGCTTGAAATAGTGCCGT 57.527 45.000 0.00 0.00 0.00 5.68
75 76 2.032550 CCATGAGCTTGAAATAGTGCCG 59.967 50.000 0.00 0.00 0.00 5.69
76 77 2.360165 CCCATGAGCTTGAAATAGTGCC 59.640 50.000 0.00 0.00 0.00 5.01
77 78 3.282021 TCCCATGAGCTTGAAATAGTGC 58.718 45.455 0.00 0.00 0.00 4.40
90 91 2.202932 CCGTTCGGCTCCCATGAG 60.203 66.667 0.00 0.00 41.84 2.90
91 92 4.467084 GCCGTTCGGCTCCCATGA 62.467 66.667 25.91 0.00 46.99 3.07
100 101 1.424493 GAGCATCTTCAGCCGTTCGG 61.424 60.000 6.90 6.90 0.00 4.30
101 102 2.002127 GAGCATCTTCAGCCGTTCG 58.998 57.895 0.00 0.00 0.00 3.95
113 114 3.254060 TCGTGTCAAAGCTAAGAGCATC 58.746 45.455 0.64 0.00 45.56 3.91
114 115 3.319137 TCGTGTCAAAGCTAAGAGCAT 57.681 42.857 0.64 0.00 45.56 3.79
115 116 2.812358 TCGTGTCAAAGCTAAGAGCA 57.188 45.000 0.64 0.00 45.56 4.26
116 117 7.061673 CAGATATATCGTGTCAAAGCTAAGAGC 59.938 40.741 7.08 0.00 42.84 4.09
117 118 8.079203 ACAGATATATCGTGTCAAAGCTAAGAG 58.921 37.037 7.08 0.00 0.00 2.85
118 119 7.941919 ACAGATATATCGTGTCAAAGCTAAGA 58.058 34.615 7.08 0.00 0.00 2.10
119 120 8.079203 AGACAGATATATCGTGTCAAAGCTAAG 58.921 37.037 28.11 0.00 42.59 2.18
120 121 7.862873 CAGACAGATATATCGTGTCAAAGCTAA 59.137 37.037 28.11 0.00 42.59 3.09
121 122 7.013369 ACAGACAGATATATCGTGTCAAAGCTA 59.987 37.037 28.11 0.00 42.59 3.32
122 123 6.183360 ACAGACAGATATATCGTGTCAAAGCT 60.183 38.462 28.11 15.76 42.59 3.74
123 124 5.980116 ACAGACAGATATATCGTGTCAAAGC 59.020 40.000 28.11 14.39 42.59 3.51
124 125 6.638873 GGACAGACAGATATATCGTGTCAAAG 59.361 42.308 28.11 22.72 42.59 2.77
125 126 6.096282 TGGACAGACAGATATATCGTGTCAAA 59.904 38.462 28.11 18.69 42.59 2.69
126 127 5.592688 TGGACAGACAGATATATCGTGTCAA 59.407 40.000 28.11 20.31 42.59 3.18
127 128 5.130350 TGGACAGACAGATATATCGTGTCA 58.870 41.667 28.11 17.82 42.59 3.58
128 129 5.690997 TGGACAGACAGATATATCGTGTC 57.309 43.478 23.71 23.71 40.82 3.67
129 130 7.761038 TTATGGACAGACAGATATATCGTGT 57.239 36.000 14.05 14.05 0.00 4.49
130 131 7.641802 CGATTATGGACAGACAGATATATCGTG 59.358 40.741 12.78 11.00 0.00 4.35
131 132 7.553044 TCGATTATGGACAGACAGATATATCGT 59.447 37.037 7.08 8.24 0.00 3.73
132 133 7.920738 TCGATTATGGACAGACAGATATATCG 58.079 38.462 7.08 5.26 0.00 2.92
135 136 8.687242 GGATTCGATTATGGACAGACAGATATA 58.313 37.037 0.00 0.00 0.00 0.86
136 137 7.551585 GGATTCGATTATGGACAGACAGATAT 58.448 38.462 0.00 0.00 0.00 1.63
137 138 6.349363 CGGATTCGATTATGGACAGACAGATA 60.349 42.308 0.00 0.00 39.00 1.98
138 139 5.565637 CGGATTCGATTATGGACAGACAGAT 60.566 44.000 0.00 0.00 39.00 2.90
139 140 4.261614 CGGATTCGATTATGGACAGACAGA 60.262 45.833 0.00 0.00 39.00 3.41
140 141 3.983988 CGGATTCGATTATGGACAGACAG 59.016 47.826 0.00 0.00 39.00 3.51
141 142 3.798889 GCGGATTCGATTATGGACAGACA 60.799 47.826 0.00 0.00 39.00 3.41
142 143 2.731976 GCGGATTCGATTATGGACAGAC 59.268 50.000 0.00 0.00 39.00 3.51
218 223 2.976840 GAAGTTGGCATTGCGCGGA 61.977 57.895 8.83 0.00 43.84 5.54
227 232 0.250252 TGTGCTCGATGAAGTTGGCA 60.250 50.000 0.00 0.00 0.00 4.92
229 234 0.798776 GGTGTGCTCGATGAAGTTGG 59.201 55.000 0.00 0.00 0.00 3.77
295 306 6.617879 TCATATATAAATATCGATCGCCGGG 58.382 40.000 11.09 0.00 39.14 5.73
314 325 1.202580 GCCGTCAGTTCCAGCTCATAT 60.203 52.381 0.00 0.00 0.00 1.78
335 346 3.853330 CACAATCACTCGCCGCGG 61.853 66.667 24.05 24.05 0.00 6.46
336 347 3.853330 CCACAATCACTCGCCGCG 61.853 66.667 6.39 6.39 0.00 6.46
337 348 4.166011 GCCACAATCACTCGCCGC 62.166 66.667 0.00 0.00 0.00 6.53
338 349 2.108514 ATGCCACAATCACTCGCCG 61.109 57.895 0.00 0.00 0.00 6.46
387 445 2.202570 CGGGTGGACGCGTAGAAG 60.203 66.667 13.97 0.00 45.50 2.85
555 645 3.670377 GGGCACGCAACCAACCTC 61.670 66.667 0.00 0.00 0.00 3.85
556 646 4.514585 TGGGCACGCAACCAACCT 62.515 61.111 0.00 0.00 32.89 3.50
579 669 0.460311 GAGATCGGATCGTGGTTGGT 59.540 55.000 12.08 0.00 0.00 3.67
590 680 0.325203 TGGATGTGGTGGAGATCGGA 60.325 55.000 0.00 0.00 0.00 4.55
591 681 0.105593 CTGGATGTGGTGGAGATCGG 59.894 60.000 0.00 0.00 0.00 4.18
592 682 0.826715 ACTGGATGTGGTGGAGATCG 59.173 55.000 0.00 0.00 0.00 3.69
593 683 2.322355 CACTGGATGTGGTGGAGATC 57.678 55.000 0.00 0.00 42.68 2.75
608 698 2.343758 CACGTCCCACTCCCACTG 59.656 66.667 0.00 0.00 0.00 3.66
609 699 3.626924 GCACGTCCCACTCCCACT 61.627 66.667 0.00 0.00 0.00 4.00
610 700 4.699522 GGCACGTCCCACTCCCAC 62.700 72.222 0.00 0.00 0.00 4.61
650 740 1.227263 CCATGTCCCCGAGCGTAAG 60.227 63.158 0.00 0.00 43.44 2.34
651 741 2.727392 CCCATGTCCCCGAGCGTAA 61.727 63.158 0.00 0.00 0.00 3.18
652 742 3.151710 CCCATGTCCCCGAGCGTA 61.152 66.667 0.00 0.00 0.00 4.42
754 847 4.496336 ATCCCCGCAGCAGCCTTC 62.496 66.667 0.00 0.00 37.52 3.46
758 851 3.064324 AAACATCCCCGCAGCAGC 61.064 61.111 0.00 0.00 37.42 5.25
759 852 1.243342 TTCAAACATCCCCGCAGCAG 61.243 55.000 0.00 0.00 0.00 4.24
760 853 1.228398 TTCAAACATCCCCGCAGCA 60.228 52.632 0.00 0.00 0.00 4.41
763 856 2.622011 GCGTTCAAACATCCCCGCA 61.622 57.895 0.00 0.00 40.72 5.69
764 857 2.178273 GCGTTCAAACATCCCCGC 59.822 61.111 0.00 0.00 0.00 6.13
765 858 1.501741 CTGCGTTCAAACATCCCCG 59.498 57.895 0.00 0.00 0.00 5.73
766 859 1.595093 CCCTGCGTTCAAACATCCCC 61.595 60.000 0.00 0.00 0.00 4.81
767 860 0.608035 TCCCTGCGTTCAAACATCCC 60.608 55.000 0.00 0.00 0.00 3.85
768 861 0.804989 CTCCCTGCGTTCAAACATCC 59.195 55.000 0.00 0.00 0.00 3.51
769 862 1.523758 ACTCCCTGCGTTCAAACATC 58.476 50.000 0.00 0.00 0.00 3.06
770 863 2.615493 CCTACTCCCTGCGTTCAAACAT 60.615 50.000 0.00 0.00 0.00 2.71
772 865 1.439679 CCTACTCCCTGCGTTCAAAC 58.560 55.000 0.00 0.00 0.00 2.93
773 866 0.321298 GCCTACTCCCTGCGTTCAAA 60.321 55.000 0.00 0.00 0.00 2.69
774 867 1.295423 GCCTACTCCCTGCGTTCAA 59.705 57.895 0.00 0.00 0.00 2.69
775 868 2.656069 GGCCTACTCCCTGCGTTCA 61.656 63.158 0.00 0.00 0.00 3.18
777 870 1.774894 TTTGGCCTACTCCCTGCGTT 61.775 55.000 3.32 0.00 0.00 4.84
779 872 0.815615 GATTTGGCCTACTCCCTGCG 60.816 60.000 3.32 0.00 0.00 5.18
780 873 0.255890 TGATTTGGCCTACTCCCTGC 59.744 55.000 3.32 0.00 0.00 4.85
781 874 2.092212 ACATGATTTGGCCTACTCCCTG 60.092 50.000 3.32 3.67 0.00 4.45
782 875 2.208872 ACATGATTTGGCCTACTCCCT 58.791 47.619 3.32 0.00 0.00 4.20
783 876 2.736670 ACATGATTTGGCCTACTCCC 57.263 50.000 3.32 0.00 0.00 4.30
784 877 4.781934 ACTAACATGATTTGGCCTACTCC 58.218 43.478 3.32 0.00 0.00 3.85
786 879 5.700402 AGACTAACATGATTTGGCCTACT 57.300 39.130 3.32 0.00 0.00 2.57
787 880 6.037610 CAGAAGACTAACATGATTTGGCCTAC 59.962 42.308 3.32 0.00 0.00 3.18
788 881 6.070251 TCAGAAGACTAACATGATTTGGCCTA 60.070 38.462 3.32 0.00 0.00 3.93
789 882 4.946157 CAGAAGACTAACATGATTTGGCCT 59.054 41.667 3.32 0.00 0.00 5.19
791 884 6.500684 TTCAGAAGACTAACATGATTTGGC 57.499 37.500 0.00 0.00 0.00 4.52
797 890 8.593679 TGGAGTATTTTCAGAAGACTAACATGA 58.406 33.333 0.00 0.00 0.00 3.07
798 891 8.660373 GTGGAGTATTTTCAGAAGACTAACATG 58.340 37.037 0.00 0.00 0.00 3.21
800 893 7.732025 TGTGGAGTATTTTCAGAAGACTAACA 58.268 34.615 0.00 0.00 0.00 2.41
801 894 8.496751 GTTGTGGAGTATTTTCAGAAGACTAAC 58.503 37.037 0.00 0.00 0.00 2.34
812 2671 2.161609 CCCTGCGTTGTGGAGTATTTTC 59.838 50.000 0.00 0.00 33.44 2.29
820 2679 1.116536 TGTACTCCCTGCGTTGTGGA 61.117 55.000 0.00 0.00 0.00 4.02
821 2680 0.250124 TTGTACTCCCTGCGTTGTGG 60.250 55.000 0.00 0.00 0.00 4.17
822 2681 1.531149 CTTTGTACTCCCTGCGTTGTG 59.469 52.381 0.00 0.00 0.00 3.33
823 2682 1.414919 TCTTTGTACTCCCTGCGTTGT 59.585 47.619 0.00 0.00 0.00 3.32
824 2683 2.163818 TCTTTGTACTCCCTGCGTTG 57.836 50.000 0.00 0.00 0.00 4.10
825 2684 2.038557 ACATCTTTGTACTCCCTGCGTT 59.961 45.455 0.00 0.00 33.16 4.84
826 2685 1.623811 ACATCTTTGTACTCCCTGCGT 59.376 47.619 0.00 0.00 33.16 5.24
827 2686 2.002586 CACATCTTTGTACTCCCTGCG 58.997 52.381 0.00 0.00 33.76 5.18
829 2688 5.923114 CGATATCACATCTTTGTACTCCCTG 59.077 44.000 3.12 0.00 33.76 4.45
830 2689 5.833667 TCGATATCACATCTTTGTACTCCCT 59.166 40.000 3.12 0.00 33.76 4.20
831 2690 5.921408 GTCGATATCACATCTTTGTACTCCC 59.079 44.000 3.12 0.00 33.76 4.30
832 2691 5.625721 CGTCGATATCACATCTTTGTACTCC 59.374 44.000 3.12 0.00 33.76 3.85
833 2692 5.625721 CCGTCGATATCACATCTTTGTACTC 59.374 44.000 3.12 0.00 33.76 2.59
834 2693 5.507482 CCCGTCGATATCACATCTTTGTACT 60.507 44.000 3.12 0.00 33.76 2.73
835 2694 4.680110 CCCGTCGATATCACATCTTTGTAC 59.320 45.833 3.12 0.00 33.76 2.90
836 2695 4.581409 TCCCGTCGATATCACATCTTTGTA 59.419 41.667 3.12 0.00 33.76 2.41
837 2696 3.383505 TCCCGTCGATATCACATCTTTGT 59.616 43.478 3.12 0.00 36.15 2.83
838 2697 3.977427 TCCCGTCGATATCACATCTTTG 58.023 45.455 3.12 0.00 0.00 2.77
839 2698 4.873746 ATCCCGTCGATATCACATCTTT 57.126 40.909 3.12 0.00 0.00 2.52
840 2699 4.873746 AATCCCGTCGATATCACATCTT 57.126 40.909 3.12 0.00 0.00 2.40
841 2700 6.602009 TGTATAATCCCGTCGATATCACATCT 59.398 38.462 3.12 0.00 0.00 2.90
842 2701 6.792326 TGTATAATCCCGTCGATATCACATC 58.208 40.000 3.12 0.00 0.00 3.06
843 2702 6.680625 GCTGTATAATCCCGTCGATATCACAT 60.681 42.308 3.12 0.00 0.00 3.21
844 2703 5.392703 GCTGTATAATCCCGTCGATATCACA 60.393 44.000 3.12 0.00 0.00 3.58
845 2704 5.035443 GCTGTATAATCCCGTCGATATCAC 58.965 45.833 3.12 0.00 0.00 3.06
846 2705 4.097437 GGCTGTATAATCCCGTCGATATCA 59.903 45.833 3.12 0.00 0.00 2.15
847 2706 4.097437 TGGCTGTATAATCCCGTCGATATC 59.903 45.833 0.00 0.00 0.00 1.63
848 2707 4.021229 TGGCTGTATAATCCCGTCGATAT 58.979 43.478 0.00 0.00 0.00 1.63
849 2708 3.192001 GTGGCTGTATAATCCCGTCGATA 59.808 47.826 0.00 0.00 0.00 2.92
1011 3022 0.101759 CCGAGCAAATGAGCCAATGG 59.898 55.000 0.00 0.00 34.23 3.16
1121 3142 0.679960 TTGTCGATGGAGGAGAGCGA 60.680 55.000 0.00 0.00 0.00 4.93
1249 3270 2.108976 GCCCTCGCGAATCCATCA 59.891 61.111 11.33 0.00 0.00 3.07
1624 3645 3.426117 GATCGTGTCGCGGTCCCAT 62.426 63.158 6.13 0.00 44.46 4.00
1780 3801 2.357034 GCGTCGAAGGTGGAGCAA 60.357 61.111 0.00 0.00 0.00 3.91
2185 4206 1.740296 GTTGAGCGGGCACACGTAT 60.740 57.895 0.00 0.00 35.98 3.06
2193 4214 4.980805 TGTGGTCGTTGAGCGGGC 62.981 66.667 0.00 0.00 41.72 6.13
2210 4231 1.532868 GAGCTGCACGATGAAGTTGTT 59.467 47.619 1.02 0.00 0.00 2.83
2350 4379 1.314730 GACCAAGAAACGGGAAGCAA 58.685 50.000 0.00 0.00 0.00 3.91
2368 4397 4.188462 GTCACATTAATGGACGGACATGA 58.812 43.478 19.37 8.43 0.00 3.07
2404 4433 6.737118 TCCCTTTATTAAAACACCGTGAAAC 58.263 36.000 5.28 0.00 0.00 2.78
2405 4434 6.546772 ACTCCCTTTATTAAAACACCGTGAAA 59.453 34.615 5.28 0.00 0.00 2.69
2419 4448 8.068733 AGATGAGTTCTAGGTACTCCCTTTATT 58.931 37.037 17.72 1.66 42.73 1.40
2423 4452 5.475398 AGATGAGTTCTAGGTACTCCCTT 57.525 43.478 17.72 7.62 42.73 3.95
2425 4454 6.657541 CATCTAGATGAGTTCTAGGTACTCCC 59.342 46.154 25.78 12.05 44.99 4.30
2426 4455 7.455058 TCATCTAGATGAGTTCTAGGTACTCC 58.545 42.308 27.93 8.04 44.99 3.85
2440 4469 9.072375 AGATCAAATTACGTCTCATCTAGATGA 57.928 33.333 29.17 29.17 42.99 2.92
2441 4470 9.340695 GAGATCAAATTACGTCTCATCTAGATG 57.659 37.037 24.32 24.32 45.40 2.90
2442 4471 9.072375 TGAGATCAAATTACGTCTCATCTAGAT 57.928 33.333 0.00 0.00 41.40 1.98
2443 4472 8.451908 TGAGATCAAATTACGTCTCATCTAGA 57.548 34.615 10.72 0.00 41.40 2.43
2450 4479 6.253727 ACGTGAATGAGATCAAATTACGTCTC 59.746 38.462 12.80 6.85 37.38 3.36
2451 4480 6.035005 CACGTGAATGAGATCAAATTACGTCT 59.965 38.462 10.90 0.00 38.70 4.18
2452 4481 6.178507 CACGTGAATGAGATCAAATTACGTC 58.821 40.000 10.90 0.00 38.70 4.34
2453 4482 5.063438 CCACGTGAATGAGATCAAATTACGT 59.937 40.000 19.30 12.80 40.09 3.57
2454 4483 5.290885 TCCACGTGAATGAGATCAAATTACG 59.709 40.000 19.30 11.88 36.01 3.18
2455 4484 6.662414 TCCACGTGAATGAGATCAAATTAC 57.338 37.500 19.30 0.00 0.00 1.89
2456 4485 7.680442 TTTCCACGTGAATGAGATCAAATTA 57.320 32.000 19.30 0.00 31.67 1.40
2457 4486 6.573664 TTTCCACGTGAATGAGATCAAATT 57.426 33.333 19.30 0.00 31.67 1.82
2458 4487 6.016360 TGTTTTCCACGTGAATGAGATCAAAT 60.016 34.615 19.30 0.00 31.67 2.32
2459 4488 5.298026 TGTTTTCCACGTGAATGAGATCAAA 59.702 36.000 19.30 1.11 31.67 2.69
2460 4489 4.819088 TGTTTTCCACGTGAATGAGATCAA 59.181 37.500 19.30 0.00 31.67 2.57
2461 4490 4.384940 TGTTTTCCACGTGAATGAGATCA 58.615 39.130 19.30 4.01 31.67 2.92
2462 4491 5.179368 TCTTGTTTTCCACGTGAATGAGATC 59.821 40.000 19.30 1.38 31.67 2.75
2463 4492 5.063204 TCTTGTTTTCCACGTGAATGAGAT 58.937 37.500 19.30 0.00 31.67 2.75
2464 4493 4.447290 TCTTGTTTTCCACGTGAATGAGA 58.553 39.130 19.30 1.61 31.67 3.27
2465 4494 4.811555 TCTTGTTTTCCACGTGAATGAG 57.188 40.909 19.30 0.00 31.67 2.90
2466 4495 4.084066 CGATCTTGTTTTCCACGTGAATGA 60.084 41.667 19.30 2.48 31.67 2.57
2467 4496 4.151070 CGATCTTGTTTTCCACGTGAATG 58.849 43.478 19.30 0.00 31.67 2.67
2468 4497 3.188460 CCGATCTTGTTTTCCACGTGAAT 59.812 43.478 19.30 0.00 31.67 2.57
2469 4498 2.546368 CCGATCTTGTTTTCCACGTGAA 59.454 45.455 19.30 6.73 0.00 3.18
2470 4499 2.139917 CCGATCTTGTTTTCCACGTGA 58.860 47.619 19.30 0.00 0.00 4.35
2471 4500 2.139917 TCCGATCTTGTTTTCCACGTG 58.860 47.619 9.08 9.08 0.00 4.49
2472 4501 2.536761 TCCGATCTTGTTTTCCACGT 57.463 45.000 0.00 0.00 0.00 4.49
2473 4502 3.930229 TGTATCCGATCTTGTTTTCCACG 59.070 43.478 0.00 0.00 0.00 4.94
2474 4503 5.391629 GGTTGTATCCGATCTTGTTTTCCAC 60.392 44.000 0.00 0.00 0.00 4.02
2475 4504 4.698304 GGTTGTATCCGATCTTGTTTTCCA 59.302 41.667 0.00 0.00 0.00 3.53
2476 4505 4.095932 GGGTTGTATCCGATCTTGTTTTCC 59.904 45.833 0.00 0.00 0.00 3.13
2477 4506 4.698304 TGGGTTGTATCCGATCTTGTTTTC 59.302 41.667 0.00 0.00 0.00 2.29
2478 4507 4.658063 TGGGTTGTATCCGATCTTGTTTT 58.342 39.130 0.00 0.00 0.00 2.43
2479 4508 4.295141 TGGGTTGTATCCGATCTTGTTT 57.705 40.909 0.00 0.00 0.00 2.83
2480 4509 3.992943 TGGGTTGTATCCGATCTTGTT 57.007 42.857 0.00 0.00 0.00 2.83
2481 4510 3.199946 ACATGGGTTGTATCCGATCTTGT 59.800 43.478 0.00 0.00 36.57 3.16
2482 4511 3.808728 ACATGGGTTGTATCCGATCTTG 58.191 45.455 0.00 0.00 36.57 3.02
2483 4512 4.503714 AACATGGGTTGTATCCGATCTT 57.496 40.909 0.00 0.00 37.68 2.40
2484 4513 4.503296 GCTAACATGGGTTGTATCCGATCT 60.503 45.833 0.00 0.00 37.68 2.75
2485 4514 3.746492 GCTAACATGGGTTGTATCCGATC 59.254 47.826 0.00 0.00 37.68 3.69
2486 4515 3.135712 TGCTAACATGGGTTGTATCCGAT 59.864 43.478 0.00 0.00 37.68 4.18
2487 4516 2.502130 TGCTAACATGGGTTGTATCCGA 59.498 45.455 0.00 0.00 37.68 4.55
2488 4517 2.612212 GTGCTAACATGGGTTGTATCCG 59.388 50.000 0.00 0.00 37.68 4.18
2489 4518 3.377172 GTGTGCTAACATGGGTTGTATCC 59.623 47.826 0.00 0.00 37.68 2.59
2490 4519 4.006989 TGTGTGCTAACATGGGTTGTATC 58.993 43.478 0.00 0.00 37.68 2.24
2491 4520 4.027674 TGTGTGCTAACATGGGTTGTAT 57.972 40.909 0.00 0.00 37.68 2.29
2492 4521 3.493767 TGTGTGCTAACATGGGTTGTA 57.506 42.857 0.00 0.00 37.68 2.41
2493 4522 2.356665 TGTGTGCTAACATGGGTTGT 57.643 45.000 0.00 0.00 41.53 3.32
2494 4523 4.883585 AGATATGTGTGCTAACATGGGTTG 59.116 41.667 13.17 0.00 40.93 3.77
2495 4524 5.116084 AGATATGTGTGCTAACATGGGTT 57.884 39.130 13.17 0.00 40.93 4.11
2496 4525 4.778213 AGATATGTGTGCTAACATGGGT 57.222 40.909 13.17 2.25 40.93 4.51
2497 4526 7.065085 GCTATAAGATATGTGTGCTAACATGGG 59.935 40.741 13.17 0.00 40.93 4.00
2498 4527 7.603784 TGCTATAAGATATGTGTGCTAACATGG 59.396 37.037 13.17 0.00 40.93 3.66
2499 4528 8.538409 TGCTATAAGATATGTGTGCTAACATG 57.462 34.615 13.17 0.00 40.93 3.21
2500 4529 9.376075 GATGCTATAAGATATGTGTGCTAACAT 57.624 33.333 9.35 9.35 43.21 2.71
2501 4530 8.367156 TGATGCTATAAGATATGTGTGCTAACA 58.633 33.333 0.00 0.00 0.00 2.41
2502 4531 8.651588 GTGATGCTATAAGATATGTGTGCTAAC 58.348 37.037 0.00 0.00 0.00 2.34
2503 4532 8.367156 TGTGATGCTATAAGATATGTGTGCTAA 58.633 33.333 0.00 0.00 0.00 3.09
2504 4533 7.895759 TGTGATGCTATAAGATATGTGTGCTA 58.104 34.615 0.00 0.00 0.00 3.49
2505 4534 6.762333 TGTGATGCTATAAGATATGTGTGCT 58.238 36.000 0.00 0.00 0.00 4.40
2506 4535 7.201591 GGATGTGATGCTATAAGATATGTGTGC 60.202 40.741 0.00 0.00 0.00 4.57
2507 4536 7.820872 TGGATGTGATGCTATAAGATATGTGTG 59.179 37.037 0.00 0.00 0.00 3.82
2508 4537 7.910584 TGGATGTGATGCTATAAGATATGTGT 58.089 34.615 0.00 0.00 0.00 3.72
2509 4538 8.782339 TTGGATGTGATGCTATAAGATATGTG 57.218 34.615 0.00 0.00 0.00 3.21
2510 4539 9.392259 CATTGGATGTGATGCTATAAGATATGT 57.608 33.333 0.00 0.00 0.00 2.29
2511 4540 9.609346 TCATTGGATGTGATGCTATAAGATATG 57.391 33.333 0.00 0.00 0.00 1.78
2512 4541 9.610705 GTCATTGGATGTGATGCTATAAGATAT 57.389 33.333 0.00 0.00 0.00 1.63
2513 4542 8.819845 AGTCATTGGATGTGATGCTATAAGATA 58.180 33.333 0.00 0.00 0.00 1.98
2514 4543 7.687388 AGTCATTGGATGTGATGCTATAAGAT 58.313 34.615 0.00 0.00 0.00 2.40
2515 4544 7.071069 AGTCATTGGATGTGATGCTATAAGA 57.929 36.000 0.00 0.00 0.00 2.10
2519 4548 9.797642 TTTTATAGTCATTGGATGTGATGCTAT 57.202 29.630 0.00 0.00 32.56 2.97
2520 4549 9.276590 CTTTTATAGTCATTGGATGTGATGCTA 57.723 33.333 0.00 0.00 0.00 3.49
2521 4550 7.230108 CCTTTTATAGTCATTGGATGTGATGCT 59.770 37.037 0.00 0.00 0.00 3.79
2522 4551 7.013655 ACCTTTTATAGTCATTGGATGTGATGC 59.986 37.037 0.00 0.00 0.00 3.91
2523 4552 8.347771 CACCTTTTATAGTCATTGGATGTGATG 58.652 37.037 0.00 0.00 0.00 3.07
2524 4553 8.274322 TCACCTTTTATAGTCATTGGATGTGAT 58.726 33.333 0.00 0.00 0.00 3.06
2525 4554 7.629157 TCACCTTTTATAGTCATTGGATGTGA 58.371 34.615 0.00 0.00 0.00 3.58
2526 4555 7.864108 TCACCTTTTATAGTCATTGGATGTG 57.136 36.000 0.00 0.00 0.00 3.21
2527 4556 8.906867 CATTCACCTTTTATAGTCATTGGATGT 58.093 33.333 0.00 0.00 0.00 3.06
2528 4557 9.123902 TCATTCACCTTTTATAGTCATTGGATG 57.876 33.333 0.00 0.00 0.00 3.51
2529 4558 9.347240 CTCATTCACCTTTTATAGTCATTGGAT 57.653 33.333 0.00 0.00 0.00 3.41
2530 4559 8.548025 TCTCATTCACCTTTTATAGTCATTGGA 58.452 33.333 0.00 0.00 0.00 3.53
2531 4560 8.616076 GTCTCATTCACCTTTTATAGTCATTGG 58.384 37.037 0.00 0.00 0.00 3.16
2532 4561 8.616076 GGTCTCATTCACCTTTTATAGTCATTG 58.384 37.037 0.00 0.00 0.00 2.82
2533 4562 8.328758 TGGTCTCATTCACCTTTTATAGTCATT 58.671 33.333 0.00 0.00 34.66 2.57
2534 4563 7.861629 TGGTCTCATTCACCTTTTATAGTCAT 58.138 34.615 0.00 0.00 34.66 3.06
2535 4564 7.252612 TGGTCTCATTCACCTTTTATAGTCA 57.747 36.000 0.00 0.00 34.66 3.41
2536 4565 8.561738 TTTGGTCTCATTCACCTTTTATAGTC 57.438 34.615 0.00 0.00 34.66 2.59
2537 4566 9.533831 AATTTGGTCTCATTCACCTTTTATAGT 57.466 29.630 0.00 0.00 34.66 2.12
2542 4571 9.710900 GATTTAATTTGGTCTCATTCACCTTTT 57.289 29.630 0.00 0.00 34.66 2.27
2543 4572 9.093458 AGATTTAATTTGGTCTCATTCACCTTT 57.907 29.630 0.00 0.00 34.66 3.11
2544 4573 8.655935 AGATTTAATTTGGTCTCATTCACCTT 57.344 30.769 0.00 0.00 34.66 3.50
2545 4574 7.890127 TGAGATTTAATTTGGTCTCATTCACCT 59.110 33.333 10.50 0.00 41.40 4.00
2546 4575 8.055279 TGAGATTTAATTTGGTCTCATTCACC 57.945 34.615 10.50 0.00 41.40 4.02
2587 4616 9.364110 CGTTTCCATTTTATTAAACTGTTTTGC 57.636 29.630 11.48 0.00 31.25 3.68
2594 4623 9.915629 TGCAATACGTTTCCATTTTATTAAACT 57.084 25.926 0.00 0.00 31.25 2.66
2609 4638 7.778470 TTTTTGAAGGAAATGCAATACGTTT 57.222 28.000 0.00 0.00 40.26 3.60
2685 4714 0.892755 ATTTACCGTCAGGCTCGACA 59.107 50.000 14.48 0.00 42.76 4.35
2686 4715 1.925185 GAATTTACCGTCAGGCTCGAC 59.075 52.381 0.00 2.50 42.76 4.20
2687 4716 1.822990 AGAATTTACCGTCAGGCTCGA 59.177 47.619 0.00 0.00 42.76 4.04
2688 4717 1.927174 CAGAATTTACCGTCAGGCTCG 59.073 52.381 0.00 0.00 42.76 5.03
2689 4718 2.280628 CCAGAATTTACCGTCAGGCTC 58.719 52.381 0.00 0.00 42.76 4.70
2690 4719 1.679032 GCCAGAATTTACCGTCAGGCT 60.679 52.381 0.00 0.00 41.77 4.58
2691 4720 0.733150 GCCAGAATTTACCGTCAGGC 59.267 55.000 0.00 0.00 42.76 4.85
2692 4721 2.107950 TGCCAGAATTTACCGTCAGG 57.892 50.000 0.00 0.00 45.13 3.86
2693 4722 3.009723 ACATGCCAGAATTTACCGTCAG 58.990 45.455 0.00 0.00 0.00 3.51
2694 4723 3.066291 ACATGCCAGAATTTACCGTCA 57.934 42.857 0.00 0.00 0.00 4.35
2695 4724 4.434713 AAACATGCCAGAATTTACCGTC 57.565 40.909 0.00 0.00 0.00 4.79
2696 4725 5.007682 ACTAAACATGCCAGAATTTACCGT 58.992 37.500 0.00 0.00 0.00 4.83
2697 4726 5.560966 ACTAAACATGCCAGAATTTACCG 57.439 39.130 0.00 0.00 0.00 4.02
2698 4727 8.601845 AAAAACTAAACATGCCAGAATTTACC 57.398 30.769 0.00 0.00 0.00 2.85
2700 4729 9.699703 GGTAAAAACTAAACATGCCAGAATTTA 57.300 29.630 0.00 0.00 0.00 1.40
2707 4736 5.141182 TCCTGGTAAAAACTAAACATGCCA 58.859 37.500 0.00 0.00 0.00 4.92
2760 4797 5.160699 TGAGCATAGCAAATCGAACATTC 57.839 39.130 0.00 0.00 0.00 2.67
2769 4806 7.609056 ACTTCAGATTTTTGAGCATAGCAAAT 58.391 30.769 0.00 0.00 35.41 2.32
2803 4841 9.665719 TTTTCACAAGATATGTACTCAATGCTA 57.334 29.630 0.00 0.00 41.46 3.49
2822 4864 5.380900 TCCACTGAATGTATGGTTTTCACA 58.619 37.500 0.00 0.00 34.89 3.58
2826 4868 6.723298 TGTTTCCACTGAATGTATGGTTTT 57.277 33.333 0.00 0.00 34.89 2.43
2844 4890 6.089249 ACCAAGATGAAGTTTCCATGTTTC 57.911 37.500 0.00 0.00 0.00 2.78
2852 4898 3.058224 CCAACGGACCAAGATGAAGTTTC 60.058 47.826 0.00 0.00 0.00 2.78
2866 4912 4.454504 ACACACATTCTTTATCCAACGGAC 59.545 41.667 0.00 0.00 32.98 4.79
2873 4919 4.458989 TCAGGCAACACACATTCTTTATCC 59.541 41.667 0.00 0.00 41.41 2.59
2878 4924 3.489355 TCATCAGGCAACACACATTCTT 58.511 40.909 0.00 0.00 41.41 2.52
2887 4933 2.309613 ACAGCTTTTCATCAGGCAACA 58.690 42.857 0.00 0.00 41.41 3.33
2921 4967 2.857483 TCGAACATTTTCAGAGGGCAA 58.143 42.857 0.00 0.00 0.00 4.52
2922 4968 2.559698 TCGAACATTTTCAGAGGGCA 57.440 45.000 0.00 0.00 0.00 5.36
2923 4969 4.168760 CAAATCGAACATTTTCAGAGGGC 58.831 43.478 0.00 0.00 0.00 5.19
2924 4970 4.168760 GCAAATCGAACATTTTCAGAGGG 58.831 43.478 0.00 0.00 0.00 4.30
2927 4973 5.634439 CCATTGCAAATCGAACATTTTCAGA 59.366 36.000 1.71 0.00 0.00 3.27
2929 4975 5.295950 ACCATTGCAAATCGAACATTTTCA 58.704 33.333 1.71 0.00 0.00 2.69
2930 4976 5.844301 ACCATTGCAAATCGAACATTTTC 57.156 34.783 1.71 0.00 0.00 2.29
2933 4979 7.151308 TCTTTAACCATTGCAAATCGAACATT 58.849 30.769 1.71 0.00 0.00 2.71
2934 4980 6.686630 TCTTTAACCATTGCAAATCGAACAT 58.313 32.000 1.71 0.00 0.00 2.71
2935 4981 6.078202 TCTTTAACCATTGCAAATCGAACA 57.922 33.333 1.71 0.00 0.00 3.18
2936 4982 7.542130 AGATTCTTTAACCATTGCAAATCGAAC 59.458 33.333 1.71 0.00 0.00 3.95
2937 4983 7.541783 CAGATTCTTTAACCATTGCAAATCGAA 59.458 33.333 1.71 0.00 0.00 3.71
2938 4984 7.028962 CAGATTCTTTAACCATTGCAAATCGA 58.971 34.615 1.71 0.00 0.00 3.59
2939 4985 7.008628 GTCAGATTCTTTAACCATTGCAAATCG 59.991 37.037 1.71 0.00 0.00 3.34
2941 4987 6.808212 CGTCAGATTCTTTAACCATTGCAAAT 59.192 34.615 1.71 0.00 0.00 2.32
2942 4988 6.148948 CGTCAGATTCTTTAACCATTGCAAA 58.851 36.000 1.71 0.00 0.00 3.68
2943 4989 5.240623 ACGTCAGATTCTTTAACCATTGCAA 59.759 36.000 0.00 0.00 0.00 4.08
2945 4991 5.296813 ACGTCAGATTCTTTAACCATTGC 57.703 39.130 0.00 0.00 0.00 3.56
2947 4993 4.630069 CCGACGTCAGATTCTTTAACCATT 59.370 41.667 17.16 0.00 0.00 3.16
2948 4994 4.081862 TCCGACGTCAGATTCTTTAACCAT 60.082 41.667 17.16 0.00 0.00 3.55
2950 4996 3.841643 TCCGACGTCAGATTCTTTAACC 58.158 45.455 17.16 0.00 0.00 2.85
2951 4997 6.404712 AAATCCGACGTCAGATTCTTTAAC 57.595 37.500 23.56 0.00 31.54 2.01
2952 4998 6.128391 CCAAAATCCGACGTCAGATTCTTTAA 60.128 38.462 23.56 0.00 31.54 1.52
2953 4999 5.350365 CCAAAATCCGACGTCAGATTCTTTA 59.650 40.000 23.56 0.00 31.54 1.85
2956 5002 3.262420 CCAAAATCCGACGTCAGATTCT 58.738 45.455 23.56 10.60 31.54 2.40
2957 5003 2.351726 CCCAAAATCCGACGTCAGATTC 59.648 50.000 23.56 0.00 31.54 2.52
2959 5005 2.012051 GCCCAAAATCCGACGTCAGAT 61.012 52.381 17.16 12.71 0.00 2.90
2960 5006 0.672401 GCCCAAAATCCGACGTCAGA 60.672 55.000 17.16 10.57 0.00 3.27
2962 5008 0.322098 ATGCCCAAAATCCGACGTCA 60.322 50.000 17.16 0.00 0.00 4.35
2965 5011 2.362169 AAAATGCCCAAAATCCGACG 57.638 45.000 0.00 0.00 0.00 5.12
2985 6631 9.805966 CGCGCATCTGTTTCTAATTTATTATAA 57.194 29.630 8.75 0.00 0.00 0.98
2986 6632 8.984764 ACGCGCATCTGTTTCTAATTTATTATA 58.015 29.630 5.73 0.00 0.00 0.98
2996 6642 0.245266 TCCACGCGCATCTGTTTCTA 59.755 50.000 5.73 0.00 0.00 2.10
3002 6648 1.227060 TCTCATCCACGCGCATCTG 60.227 57.895 5.73 0.00 0.00 2.90
3036 6682 0.967380 TGAGCCTCTGCATCGACAGA 60.967 55.000 5.69 5.69 44.32 3.41
3037 6683 0.108472 TTGAGCCTCTGCATCGACAG 60.108 55.000 0.00 0.00 41.13 3.51
3046 6692 3.329386 TCTCGTTGAAATTGAGCCTCTG 58.671 45.455 0.00 0.00 0.00 3.35
3047 6693 3.685139 TCTCGTTGAAATTGAGCCTCT 57.315 42.857 0.00 0.00 0.00 3.69
3048 6694 3.425492 GCTTCTCGTTGAAATTGAGCCTC 60.425 47.826 0.00 0.00 33.79 4.70
3049 6695 2.485814 GCTTCTCGTTGAAATTGAGCCT 59.514 45.455 0.00 0.00 33.79 4.58
3061 6709 2.871096 TACCCCAATTGCTTCTCGTT 57.129 45.000 0.00 0.00 0.00 3.85
3095 6743 5.819991 AGAGAATGTAAATCCAGAAAGCCA 58.180 37.500 0.00 0.00 0.00 4.75
3127 6775 3.206964 TGAGACATGTTTTACCACGCAA 58.793 40.909 0.00 0.00 0.00 4.85
3128 6776 2.839975 TGAGACATGTTTTACCACGCA 58.160 42.857 0.00 0.00 0.00 5.24
3129 6777 4.419522 AATGAGACATGTTTTACCACGC 57.580 40.909 0.00 0.00 0.00 5.34
3130 6778 9.864034 GATATAAATGAGACATGTTTTACCACG 57.136 33.333 0.00 0.00 0.00 4.94
3172 6820 8.310406 TGTTATGTCAGTCTTTACATGACTTG 57.690 34.615 15.52 0.00 42.21 3.16
3177 6825 9.385902 CAGTTTTGTTATGTCAGTCTTTACATG 57.614 33.333 7.55 0.00 36.96 3.21
3187 6835 9.282247 GCTATCATTTCAGTTTTGTTATGTCAG 57.718 33.333 0.00 0.00 0.00 3.51
3188 6836 8.791675 TGCTATCATTTCAGTTTTGTTATGTCA 58.208 29.630 0.00 0.00 0.00 3.58
3192 6840 9.846248 GTTCTGCTATCATTTCAGTTTTGTTAT 57.154 29.630 0.00 0.00 0.00 1.89
3194 6842 7.715657 TGTTCTGCTATCATTTCAGTTTTGTT 58.284 30.769 0.00 0.00 0.00 2.83
3213 6861 9.313314 GTTGGTGTCAAACTCAGAGATGTTCTG 62.313 44.444 3.79 0.00 43.33 3.02
3225 6873 1.652563 GGGCGTTGGTGTCAAACTC 59.347 57.895 0.00 0.00 34.28 3.01
3228 6876 2.124653 ACGGGCGTTGGTGTCAAA 60.125 55.556 0.00 0.00 34.28 2.69
3231 6879 2.358247 ATGACGGGCGTTGGTGTC 60.358 61.111 0.00 0.00 0.00 3.67
3239 6887 1.210413 CGGAGATAGATGACGGGCG 59.790 63.158 0.00 0.00 0.00 6.13
3241 6889 1.267261 GTGTCGGAGATAGATGACGGG 59.733 57.143 0.00 0.00 40.67 5.28
3242 6890 1.267261 GGTGTCGGAGATAGATGACGG 59.733 57.143 0.00 0.00 40.67 4.79
3248 6896 3.542648 CTGTAGTGGTGTCGGAGATAGA 58.457 50.000 0.00 0.00 40.67 1.98
3249 6897 2.033550 GCTGTAGTGGTGTCGGAGATAG 59.966 54.545 0.00 0.00 40.67 2.08
3251 6899 0.818296 GCTGTAGTGGTGTCGGAGAT 59.182 55.000 0.00 0.00 40.67 2.75
3252 6900 0.538746 TGCTGTAGTGGTGTCGGAGA 60.539 55.000 0.00 0.00 0.00 3.71
3253 6901 0.109086 CTGCTGTAGTGGTGTCGGAG 60.109 60.000 0.00 0.00 0.00 4.63
3258 6906 1.071471 GTGGCTGCTGTAGTGGTGT 59.929 57.895 0.00 0.00 0.00 4.16
3265 6913 1.005037 CTCGTTGGTGGCTGCTGTA 60.005 57.895 0.00 0.00 0.00 2.74
3272 6920 3.231160 CGTTATTTTTCTCGTTGGTGGC 58.769 45.455 0.00 0.00 0.00 5.01
3280 6928 5.556382 CGATGGTGATCCGTTATTTTTCTCG 60.556 44.000 0.00 0.00 36.30 4.04
3281 6929 5.738370 CGATGGTGATCCGTTATTTTTCTC 58.262 41.667 0.00 0.00 36.30 2.87
3283 6931 4.035208 AGCGATGGTGATCCGTTATTTTTC 59.965 41.667 0.00 0.00 36.30 2.29
3286 6934 3.194005 AGCGATGGTGATCCGTTATTT 57.806 42.857 0.00 0.00 36.30 1.40
3289 6937 2.035449 CCTTAGCGATGGTGATCCGTTA 59.965 50.000 0.00 0.00 36.30 3.18
3292 6940 0.946221 GCCTTAGCGATGGTGATCCG 60.946 60.000 0.79 0.00 36.30 4.18
3293 6941 2.919971 GCCTTAGCGATGGTGATCC 58.080 57.895 0.79 0.00 0.00 3.36
3304 6952 1.015868 AGTACTCTCGTCGCCTTAGC 58.984 55.000 0.00 0.00 0.00 3.09
3305 6953 2.008329 ACAGTACTCTCGTCGCCTTAG 58.992 52.381 0.00 0.00 0.00 2.18
3306 6954 2.105006 ACAGTACTCTCGTCGCCTTA 57.895 50.000 0.00 0.00 0.00 2.69
3307 6955 1.736681 GTACAGTACTCTCGTCGCCTT 59.263 52.381 3.19 0.00 0.00 4.35
3308 6956 1.367659 GTACAGTACTCTCGTCGCCT 58.632 55.000 3.19 0.00 0.00 5.52
3309 6957 0.026027 CGTACAGTACTCTCGTCGCC 59.974 60.000 9.10 0.00 0.00 5.54
3310 6958 0.994995 TCGTACAGTACTCTCGTCGC 59.005 55.000 9.10 0.00 0.00 5.19
3311 6959 1.322936 GGTCGTACAGTACTCTCGTCG 59.677 57.143 9.10 0.00 0.00 5.12
3312 6960 1.322936 CGGTCGTACAGTACTCTCGTC 59.677 57.143 9.10 0.00 0.00 4.20
3313 6961 1.354040 CGGTCGTACAGTACTCTCGT 58.646 55.000 9.10 0.00 0.00 4.18
3314 6962 0.026027 GCGGTCGTACAGTACTCTCG 59.974 60.000 9.10 9.79 0.00 4.04
3315 6963 0.376502 GGCGGTCGTACAGTACTCTC 59.623 60.000 9.10 0.00 0.00 3.20
3316 6964 0.035630 AGGCGGTCGTACAGTACTCT 60.036 55.000 9.10 0.00 0.00 3.24
3317 6965 0.376502 GAGGCGGTCGTACAGTACTC 59.623 60.000 9.10 2.29 0.00 2.59
3318 6966 1.028868 GGAGGCGGTCGTACAGTACT 61.029 60.000 9.10 0.00 0.00 2.73
3319 6967 1.431036 GGAGGCGGTCGTACAGTAC 59.569 63.158 0.00 0.00 0.00 2.73
3320 6968 2.108514 CGGAGGCGGTCGTACAGTA 61.109 63.158 0.00 0.00 0.00 2.74
3321 6969 3.437795 CGGAGGCGGTCGTACAGT 61.438 66.667 0.00 0.00 0.00 3.55
3322 6970 3.129502 TCGGAGGCGGTCGTACAG 61.130 66.667 0.00 0.00 0.00 2.74
3323 6971 3.434319 GTCGGAGGCGGTCGTACA 61.434 66.667 0.00 0.00 0.00 2.90
3348 6996 3.330720 AACGGGCAAGGGAGGAGG 61.331 66.667 0.00 0.00 0.00 4.30
3349 6997 2.045926 CAACGGGCAAGGGAGGAG 60.046 66.667 0.00 0.00 0.00 3.69
3350 6998 4.344865 GCAACGGGCAAGGGAGGA 62.345 66.667 0.00 0.00 43.97 3.71
3355 7003 2.978010 AAGACGCAACGGGCAAGG 60.978 61.111 2.26 0.00 45.17 3.61
3356 7004 2.252260 CAAGACGCAACGGGCAAG 59.748 61.111 2.26 0.00 45.17 4.01
3357 7005 3.959975 GCAAGACGCAACGGGCAA 61.960 61.111 2.26 0.00 45.17 4.52
3384 7032 3.723364 CTTGAATTGGAGGCGCGCG 62.723 63.158 28.44 28.44 0.00 6.86
3385 7033 2.100991 CTTGAATTGGAGGCGCGC 59.899 61.111 25.94 25.94 0.00 6.86
3386 7034 2.100991 GCTTGAATTGGAGGCGCG 59.899 61.111 0.00 0.00 0.00 6.86
3387 7035 2.100991 CGCTTGAATTGGAGGCGC 59.899 61.111 0.00 0.00 39.42 6.53
3389 7037 1.508088 CCACGCTTGAATTGGAGGC 59.492 57.895 0.00 0.00 31.39 4.70
3390 7038 1.937546 GCCCACGCTTGAATTGGAGG 61.938 60.000 0.00 0.00 31.39 4.30
3391 7039 1.508088 GCCCACGCTTGAATTGGAG 59.492 57.895 0.00 0.00 31.39 3.86
3392 7040 2.331893 CGCCCACGCTTGAATTGGA 61.332 57.895 0.00 0.00 31.39 3.53
3393 7041 2.179018 CGCCCACGCTTGAATTGG 59.821 61.111 0.00 0.00 0.00 3.16
3394 7042 2.953821 ACGCCCACGCTTGAATTG 59.046 55.556 0.00 0.00 45.53 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.