Multiple sequence alignment - TraesCS3D01G432200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G432200 chr3D 100.000 6084 0 0 1 6084 545974378 545968295 0.000000e+00 11236.0
1 TraesCS3D01G432200 chr3B 90.816 3136 200 51 3 3098 722480897 722477810 0.000000e+00 4115.0
2 TraesCS3D01G432200 chr3B 86.023 787 74 23 4727 5483 722476190 722475410 0.000000e+00 811.0
3 TraesCS3D01G432200 chr3B 86.588 425 36 7 4285 4708 722476691 722476287 3.340000e-122 449.0
4 TraesCS3D01G432200 chr3B 86.154 195 20 4 5851 6045 722474883 722474696 2.870000e-48 204.0
5 TraesCS3D01G432200 chr3B 81.592 201 29 7 3911 4107 722476919 722476723 6.310000e-35 159.0
6 TraesCS3D01G432200 chr3B 90.179 112 7 3 4341 4449 722477747 722477857 6.360000e-30 143.0
7 TraesCS3D01G432200 chr3B 100.000 39 0 0 3100 3138 722477785 722477747 8.460000e-09 73.1
8 TraesCS3D01G432200 chr3B 97.297 37 1 0 88 124 252661492 252661456 5.090000e-06 63.9
9 TraesCS3D01G432200 chr3B 100.000 28 0 0 3069 3096 271822695 271822722 1.100000e-02 52.8
10 TraesCS3D01G432200 chr3A 91.721 1534 92 23 1666 3179 682364444 682362926 0.000000e+00 2097.0
11 TraesCS3D01G432200 chr3A 84.513 1879 163 55 4219 6026 682361774 682359953 0.000000e+00 1740.0
12 TraesCS3D01G432200 chr3A 91.265 893 44 13 778 1655 682365886 682365013 0.000000e+00 1186.0
13 TraesCS3D01G432200 chr3A 87.566 756 68 20 1 736 682366635 682365886 0.000000e+00 852.0
14 TraesCS3D01G432200 chr3A 100.000 30 0 0 734 763 682365900 682365871 8.520000e-04 56.5
15 TraesCS3D01G432200 chr7B 78.860 842 110 43 5225 6020 19783177 19783996 1.960000e-139 507.0
16 TraesCS3D01G432200 chr5D 80.537 149 21 4 4248 4396 174635949 174636089 2.320000e-19 108.0
17 TraesCS3D01G432200 chr5D 87.500 80 10 0 141 220 26787629 26787708 6.490000e-15 93.5
18 TraesCS3D01G432200 chr5D 91.045 67 2 3 4386 4449 174795084 174795149 3.020000e-13 87.9
19 TraesCS3D01G432200 chr5D 94.340 53 3 0 213 265 399940472 399940420 1.410000e-11 82.4
20 TraesCS3D01G432200 chr2A 80.916 131 19 3 141 265 27937104 27936974 1.400000e-16 99.0
21 TraesCS3D01G432200 chr2B 91.045 67 5 1 152 218 486088800 486088735 8.400000e-14 89.8
22 TraesCS3D01G432200 chr2B 80.172 116 18 5 144 257 774501752 774501864 1.410000e-11 82.4
23 TraesCS3D01G432200 chr2B 89.474 57 6 0 213 269 793322785 793322729 8.460000e-09 73.1
24 TraesCS3D01G432200 chr5B 93.443 61 0 3 4392 4449 182994755 182994696 3.020000e-13 87.9
25 TraesCS3D01G432200 chr5B 86.486 74 9 1 148 220 63243907 63243834 5.060000e-11 80.5
26 TraesCS3D01G432200 chr5B 87.143 70 6 3 152 219 676094963 676094895 6.540000e-10 76.8
27 TraesCS3D01G432200 chr5A 91.045 67 2 3 4386 4449 198648332 198648397 3.020000e-13 87.9
28 TraesCS3D01G432200 chr1B 90.000 60 6 0 213 272 172250357 172250298 1.820000e-10 78.7
29 TraesCS3D01G432200 chr6B 90.909 55 5 0 218 272 452164557 452164503 2.350000e-09 75.0
30 TraesCS3D01G432200 chr2D 81.188 101 11 7 163 260 630128790 630128885 2.350000e-09 75.0
31 TraesCS3D01G432200 chr7A 93.750 48 3 0 220 267 501033452 501033405 8.460000e-09 73.1
32 TraesCS3D01G432200 chr7D 91.304 46 4 0 3051 3096 633070964 633070919 5.090000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G432200 chr3D 545968295 545974378 6083 True 11236.000000 11236 100.000000 1 6084 1 chr3D.!!$R1 6083
1 TraesCS3D01G432200 chr3B 722474696 722480897 6201 True 968.516667 4115 88.528833 3 6045 6 chr3B.!!$R2 6042
2 TraesCS3D01G432200 chr3A 682359953 682366635 6682 True 1186.300000 2097 91.013000 1 6026 5 chr3A.!!$R1 6025
3 TraesCS3D01G432200 chr7B 19783177 19783996 819 False 507.000000 507 78.860000 5225 6020 1 chr7B.!!$F1 795

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
760 804 0.036010 AAGCCAATCCAGTCAGACGG 60.036 55.0 5.37 5.37 0.00 4.79 F
1566 1632 0.108186 CTAGCCGAACACCATGCTGA 60.108 55.0 0.00 0.00 35.34 4.26 F
3232 4141 0.036875 GTTTCCCTGTCCCTGTCCTG 59.963 60.0 0.00 0.00 0.00 3.86 F
4162 5357 0.035152 TTGTAGCCCTGCTGATGTGG 60.035 55.0 0.00 0.00 40.10 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2068 2696 0.395724 GGATGACTCGCCCCCATTTT 60.396 55.0 0.00 0.0 0.00 1.82 R
3283 4383 0.109873 CCGTTGAAGCTCGTAGACGT 60.110 55.0 1.46 0.0 40.80 4.34 R
4719 5997 0.036164 CATTCAAGACCACCGTCCCA 59.964 55.0 0.00 0.0 40.12 4.37 R
5971 7499 0.099259 ACACGATGGATTTGCATGCG 59.901 50.0 14.09 0.0 0.00 4.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 7.913789 AGGAATATATTGCGAACCAACCTATA 58.086 34.615 10.87 0.00 35.99 1.31
98 99 5.512942 TTGGATTGTTAGGAGGACAATGA 57.487 39.130 7.15 0.00 45.11 2.57
106 108 5.669904 TGTTAGGAGGACAATGATATCCCAA 59.330 40.000 0.00 0.00 35.38 4.12
130 132 4.003648 CCATCAGGGTTCAAGTTACAGAC 58.996 47.826 0.00 0.00 0.00 3.51
170 175 1.532523 TGGTGCTCGCATTTTCATGA 58.467 45.000 0.00 0.00 31.07 3.07
176 181 5.230726 GGTGCTCGCATTTTCATGAATTTAG 59.769 40.000 9.40 1.42 31.07 1.85
183 188 8.243426 TCGCATTTTCATGAATTTAGTTTAGCT 58.757 29.630 9.40 0.00 31.07 3.32
218 223 0.680061 GTTCAGTGGGAGGAGACGTT 59.320 55.000 0.00 0.00 0.00 3.99
224 229 0.761323 TGGGAGGAGACGTTTGTGGA 60.761 55.000 0.00 0.00 0.00 4.02
245 250 5.936372 TGGAGACTTTGTCAATCTCAAGATG 59.064 40.000 15.03 0.00 40.61 2.90
251 256 6.713903 ACTTTGTCAATCTCAAGATGATGTGT 59.286 34.615 0.00 0.00 34.49 3.72
259 264 1.931841 CAAGATGATGTGTCGGCTCAG 59.068 52.381 0.00 0.00 0.00 3.35
260 265 0.179089 AGATGATGTGTCGGCTCAGC 60.179 55.000 0.00 0.00 0.00 4.26
283 288 4.932200 CCTCTTGAAAGTATGAGCGTCTTT 59.068 41.667 0.00 0.00 34.68 2.52
286 291 6.452242 TCTTGAAAGTATGAGCGTCTTTGTA 58.548 36.000 0.00 0.00 32.59 2.41
367 382 2.355756 CGCAATCATGTGAAACCCCTAG 59.644 50.000 0.00 0.00 39.48 3.02
398 413 4.213694 TGCTCTATCCGTCTCTATCGAAAC 59.786 45.833 0.00 0.00 0.00 2.78
414 431 5.216566 TCGAAACAAGGATAAATTGCTCG 57.783 39.130 0.00 0.00 37.51 5.03
462 482 6.846350 AGAAAACCATCTAAAAGCAGATTCG 58.154 36.000 0.00 0.00 32.83 3.34
521 541 2.659757 TCGCTGAAAATTACACGACGAG 59.340 45.455 0.00 0.00 0.00 4.18
534 554 3.805422 ACACGACGAGCAAGTTTGATTAA 59.195 39.130 0.00 0.00 0.00 1.40
593 622 1.901591 ACTCGACGAGACTTTGGGTA 58.098 50.000 30.56 0.00 33.32 3.69
664 694 2.582052 TCAGTTTCGGTTGAAGGCAAT 58.418 42.857 0.00 0.00 36.22 3.56
700 730 0.321564 CAACCGAGGCCTCAATGTCA 60.322 55.000 31.67 0.00 0.00 3.58
717 761 4.357918 TGTCAGGAGGAAAGAAAGGAAG 57.642 45.455 0.00 0.00 0.00 3.46
736 780 1.830477 AGACACAAAGCCAAAGCCAAA 59.170 42.857 0.00 0.00 41.25 3.28
737 781 2.159057 AGACACAAAGCCAAAGCCAAAG 60.159 45.455 0.00 0.00 41.25 2.77
738 782 0.939419 CACAAAGCCAAAGCCAAAGC 59.061 50.000 0.00 0.00 41.25 3.51
739 783 0.179048 ACAAAGCCAAAGCCAAAGCC 60.179 50.000 0.00 0.00 41.25 4.35
741 785 0.545646 AAAGCCAAAGCCAAAGCCAA 59.454 45.000 0.00 0.00 41.25 4.52
742 786 0.545646 AAGCCAAAGCCAAAGCCAAA 59.454 45.000 0.00 0.00 41.25 3.28
743 787 0.107268 AGCCAAAGCCAAAGCCAAAG 59.893 50.000 0.00 0.00 41.25 2.77
744 788 1.509644 GCCAAAGCCAAAGCCAAAGC 61.510 55.000 0.00 0.00 41.25 3.51
745 789 0.886043 CCAAAGCCAAAGCCAAAGCC 60.886 55.000 0.00 0.00 41.25 4.35
746 790 0.179051 CAAAGCCAAAGCCAAAGCCA 60.179 50.000 0.00 0.00 41.25 4.75
747 791 0.545646 AAAGCCAAAGCCAAAGCCAA 59.454 45.000 0.00 0.00 41.25 4.52
748 792 0.766752 AAGCCAAAGCCAAAGCCAAT 59.233 45.000 0.00 0.00 41.25 3.16
749 793 0.322648 AGCCAAAGCCAAAGCCAATC 59.677 50.000 0.00 0.00 41.25 2.67
750 794 0.674581 GCCAAAGCCAAAGCCAATCC 60.675 55.000 0.00 0.00 41.25 3.01
751 795 0.686224 CCAAAGCCAAAGCCAATCCA 59.314 50.000 0.00 0.00 41.25 3.41
752 796 1.338389 CCAAAGCCAAAGCCAATCCAG 60.338 52.381 0.00 0.00 41.25 3.86
753 797 1.345415 CAAAGCCAAAGCCAATCCAGT 59.655 47.619 0.00 0.00 41.25 4.00
754 798 1.260544 AAGCCAAAGCCAATCCAGTC 58.739 50.000 0.00 0.00 41.25 3.51
755 799 0.112995 AGCCAAAGCCAATCCAGTCA 59.887 50.000 0.00 0.00 41.25 3.41
756 800 0.529378 GCCAAAGCCAATCCAGTCAG 59.471 55.000 0.00 0.00 0.00 3.51
757 801 1.887956 GCCAAAGCCAATCCAGTCAGA 60.888 52.381 0.00 0.00 0.00 3.27
758 802 1.815003 CCAAAGCCAATCCAGTCAGAC 59.185 52.381 0.00 0.00 0.00 3.51
759 803 1.466167 CAAAGCCAATCCAGTCAGACG 59.534 52.381 0.00 0.00 0.00 4.18
760 804 0.036010 AAGCCAATCCAGTCAGACGG 60.036 55.000 5.37 5.37 0.00 4.79
761 805 0.904865 AGCCAATCCAGTCAGACGGA 60.905 55.000 14.15 14.15 35.27 4.69
762 806 0.179000 GCCAATCCAGTCAGACGGAT 59.821 55.000 16.69 16.69 44.09 4.18
763 807 1.412710 GCCAATCCAGTCAGACGGATA 59.587 52.381 20.52 3.55 41.28 2.59
764 808 2.037772 GCCAATCCAGTCAGACGGATAT 59.962 50.000 20.52 12.00 41.28 1.63
765 809 3.495100 GCCAATCCAGTCAGACGGATATT 60.495 47.826 20.52 10.00 41.28 1.28
766 810 4.708177 CCAATCCAGTCAGACGGATATTT 58.292 43.478 20.52 9.04 41.28 1.40
767 811 5.126067 CCAATCCAGTCAGACGGATATTTT 58.874 41.667 20.52 8.78 41.28 1.82
768 812 5.590259 CCAATCCAGTCAGACGGATATTTTT 59.410 40.000 20.52 8.51 41.28 1.94
808 852 8.029522 GTCAGACGGATTAATTAGCAGATGATA 58.970 37.037 0.00 0.00 0.00 2.15
974 1034 3.134792 GGGACAGCGAGCGAGAGA 61.135 66.667 0.00 0.00 0.00 3.10
1179 1240 2.335011 CGCATCGACATCCGCCTA 59.665 61.111 0.00 0.00 38.37 3.93
1199 1260 1.760086 CAGGTCTCGCCATCTCCCT 60.760 63.158 0.00 0.00 40.61 4.20
1326 1392 1.379527 GATCGGGCTAGGGTTTTGTG 58.620 55.000 0.00 0.00 0.00 3.33
1327 1393 0.679960 ATCGGGCTAGGGTTTTGTGC 60.680 55.000 0.00 0.00 0.00 4.57
1357 1423 1.268352 CCCTCGATCGATCTTCCAGAC 59.732 57.143 19.78 0.00 0.00 3.51
1366 1432 5.055265 TCGATCTTCCAGACTAGGATCTT 57.945 43.478 0.00 0.00 37.56 2.40
1428 1494 1.790090 TTGCGCCGACAGATTTGCAA 61.790 50.000 4.18 0.00 39.73 4.08
1454 1520 3.087031 AGGTTGGAATTCTGCAGATGTG 58.913 45.455 19.04 0.00 0.00 3.21
1468 1534 3.249320 GCAGATGTGTACATGCGATTCAT 59.751 43.478 0.00 0.00 36.57 2.57
1500 1566 7.581213 TTTTGTAATGTGAAGAGATTGTGGT 57.419 32.000 0.00 0.00 0.00 4.16
1517 1583 1.239296 GGTGTTGAGCAGCAGCATGA 61.239 55.000 3.17 0.00 45.49 3.07
1518 1584 0.168348 GTGTTGAGCAGCAGCATGAG 59.832 55.000 3.17 0.00 45.49 2.90
1528 1594 2.020131 CAGCATGAGAACATCCCGC 58.980 57.895 0.00 0.00 39.69 6.13
1529 1595 1.522355 AGCATGAGAACATCCCGCG 60.522 57.895 0.00 0.00 34.15 6.46
1532 1598 0.460109 CATGAGAACATCCCGCGTCA 60.460 55.000 4.92 0.00 34.15 4.35
1566 1632 0.108186 CTAGCCGAACACCATGCTGA 60.108 55.000 0.00 0.00 35.34 4.26
1598 1664 9.048446 CAAAAAGAATCATCTGTGTCCATTTTT 57.952 29.630 0.00 0.00 35.59 1.94
1662 2285 9.973450 ACTGTACATCACTTATAAGCTAATGAG 57.027 33.333 20.58 13.62 0.00 2.90
1663 2286 9.973450 CTGTACATCACTTATAAGCTAATGAGT 57.027 33.333 20.58 14.44 0.00 3.41
1677 2300 0.828762 ATGAGTGGCAGCCAAAGCAA 60.829 50.000 18.28 0.30 43.56 3.91
1678 2301 0.828762 TGAGTGGCAGCCAAAGCAAT 60.829 50.000 18.28 0.00 43.56 3.56
1808 2431 1.066143 CGGAAGCTTTCCTTCTGCCTA 60.066 52.381 0.00 0.00 46.73 3.93
1854 2477 2.113860 TCTGTATGCCTTGGTGAAGC 57.886 50.000 0.00 0.00 0.00 3.86
1904 2528 3.485394 TGCATTACTCTGAGCCAACAAA 58.515 40.909 4.19 0.00 0.00 2.83
1986 2614 5.944007 GGTCATTACCAGTAGGACATTGTTT 59.056 40.000 11.43 0.00 45.98 2.83
2018 2646 7.509141 TGAATGCAACAAGTAGAAAATCTGA 57.491 32.000 0.00 0.00 0.00 3.27
2045 2673 7.446931 TGTTTCAATGTTGGCATAGTCTTAAGA 59.553 33.333 0.00 0.00 34.39 2.10
2093 2721 1.048601 GGGGCGAGTCATCCAATCTA 58.951 55.000 0.00 0.00 0.00 1.98
2100 2728 5.758296 GGCGAGTCATCCAATCTACAAATAA 59.242 40.000 0.00 0.00 0.00 1.40
2142 2770 9.630098 ATTGTTCTTGTATTTGCAATGAGTTAG 57.370 29.630 0.00 0.00 0.00 2.34
2424 3055 7.033185 AGTTCCATGTTTTTAACACACAACTC 58.967 34.615 0.00 0.00 45.50 3.01
2507 3140 5.053145 GCGATCTTCTAACCATTGAGTCAT 58.947 41.667 0.00 0.00 0.00 3.06
2510 3143 7.224753 GCGATCTTCTAACCATTGAGTCATTTA 59.775 37.037 0.00 0.00 0.00 1.40
2578 3211 1.136565 CGTATGTTTTGCCTGGGCG 59.863 57.895 7.14 0.00 45.51 6.13
2648 3281 4.334552 ACATGTCAATCAATACACAGCCA 58.665 39.130 0.00 0.00 0.00 4.75
2730 3363 4.948847 TGCTCTATGTATAGTTGGTGCTG 58.051 43.478 0.00 0.00 0.00 4.41
2736 3369 4.835284 TGTATAGTTGGTGCTGGATGAA 57.165 40.909 0.00 0.00 0.00 2.57
2738 3371 5.754782 TGTATAGTTGGTGCTGGATGAAAT 58.245 37.500 0.00 0.00 0.00 2.17
2744 3377 2.575735 TGGTGCTGGATGAAATGGTAGA 59.424 45.455 0.00 0.00 0.00 2.59
2748 3381 3.519107 TGCTGGATGAAATGGTAGAGTGA 59.481 43.478 0.00 0.00 0.00 3.41
2866 3499 4.321718 TGTCTTCCAATCAGCTCTTCAAG 58.678 43.478 0.00 0.00 0.00 3.02
2885 3518 9.515226 TCTTCAAGTAAGGTGCAATATTTTACT 57.485 29.630 4.39 4.39 36.44 2.24
2958 3591 8.682710 GCTAATAAAAGAATTCCACATGGTGTA 58.317 33.333 0.65 0.00 36.34 2.90
2960 3593 8.650143 AATAAAAGAATTCCACATGGTGTACT 57.350 30.769 0.65 0.00 36.34 2.73
2991 3626 6.071728 CGAGTAAAAGTTAGGAGTAGTTGGGA 60.072 42.308 0.00 0.00 0.00 4.37
3057 3692 2.158449 CGTGTTTGCTGGATGAGAGAAC 59.842 50.000 0.00 0.00 0.00 3.01
3059 3694 4.569943 GTGTTTGCTGGATGAGAGAACTA 58.430 43.478 0.00 0.00 0.00 2.24
3067 3702 5.982516 GCTGGATGAGAGAACTACACATTAG 59.017 44.000 0.00 0.00 0.00 1.73
3098 3733 4.142038 ACTTGCCACTCGGTTTAAGAATT 58.858 39.130 0.00 0.00 33.28 2.17
3146 4015 2.174334 CAGGAATCAACCCTGCACG 58.826 57.895 0.00 0.00 43.93 5.34
3148 4017 1.971167 GGAATCAACCCTGCACGCA 60.971 57.895 0.00 0.00 0.00 5.24
3169 4038 1.748493 GTTTTGACCACACCTGAAGCA 59.252 47.619 0.00 0.00 0.00 3.91
3179 4048 2.301346 CACCTGAAGCAGTTTTGACCT 58.699 47.619 0.00 0.00 0.00 3.85
3225 4134 3.028130 CTCTCTCTAGTTTCCCTGTCCC 58.972 54.545 0.00 0.00 0.00 4.46
3226 4135 2.655407 TCTCTCTAGTTTCCCTGTCCCT 59.345 50.000 0.00 0.00 0.00 4.20
3227 4136 2.763448 CTCTCTAGTTTCCCTGTCCCTG 59.237 54.545 0.00 0.00 0.00 4.45
3228 4137 2.111972 TCTCTAGTTTCCCTGTCCCTGT 59.888 50.000 0.00 0.00 0.00 4.00
3231 4140 0.104409 AGTTTCCCTGTCCCTGTCCT 60.104 55.000 0.00 0.00 0.00 3.85
3232 4141 0.036875 GTTTCCCTGTCCCTGTCCTG 59.963 60.000 0.00 0.00 0.00 3.86
3274 4374 4.135153 CTGTGGCCCTCTCCGACG 62.135 72.222 0.00 0.00 0.00 5.12
3301 4428 0.975544 CACGTCTACGAGCTTCAACG 59.024 55.000 9.86 0.00 43.02 4.10
3304 4431 1.665161 CGTCTACGAGCTTCAACGGTT 60.665 52.381 0.00 0.00 43.02 4.44
3329 4456 2.348998 CCACCACCTCCACTGCTC 59.651 66.667 0.00 0.00 0.00 4.26
3330 4457 2.519622 CCACCACCTCCACTGCTCA 61.520 63.158 0.00 0.00 0.00 4.26
3331 4458 1.681666 CACCACCTCCACTGCTCAT 59.318 57.895 0.00 0.00 0.00 2.90
3339 4466 0.970427 TCCACTGCTCATAGCCGACA 60.970 55.000 0.00 0.00 41.51 4.35
3358 4485 2.504519 GGATCCGGTAGCCACCAC 59.495 66.667 0.00 0.00 46.14 4.16
3396 4523 2.267961 GTGGATCCGGTCACCACC 59.732 66.667 25.18 12.61 45.53 4.61
3417 4544 1.530771 GGTCTCCATCATGCTGCCT 59.469 57.895 0.00 0.00 0.00 4.75
3491 4618 1.475751 CGTCCCTCCCATCAATTCCAG 60.476 57.143 0.00 0.00 0.00 3.86
3502 4629 0.957395 CAATTCCAGCCGTGAGTGCT 60.957 55.000 0.00 0.00 37.98 4.40
3504 4631 4.687215 TCCAGCCGTGAGTGCTGC 62.687 66.667 6.73 0.00 46.86 5.25
3526 4653 1.583477 GAAGCAAAGCAGAGGCACC 59.417 57.895 0.00 0.00 44.61 5.01
3528 4655 2.598394 GCAAAGCAGAGGCACCCA 60.598 61.111 0.00 0.00 44.61 4.51
3579 4709 4.335647 CCGGGGAGCAGCAACAGT 62.336 66.667 0.00 0.00 0.00 3.55
3580 4710 2.743928 CGGGGAGCAGCAACAGTC 60.744 66.667 0.00 0.00 0.00 3.51
3581 4711 2.753029 GGGGAGCAGCAACAGTCT 59.247 61.111 0.00 0.00 0.00 3.24
3582 4712 1.073897 GGGGAGCAGCAACAGTCTT 59.926 57.895 0.00 0.00 0.00 3.01
3584 4714 0.957888 GGGAGCAGCAACAGTCTTCC 60.958 60.000 0.00 0.00 0.00 3.46
3585 4715 0.036022 GGAGCAGCAACAGTCTTCCT 59.964 55.000 0.00 0.00 0.00 3.36
3663 4825 0.892063 GACCAGTTCTCGCTTCCTCT 59.108 55.000 0.00 0.00 0.00 3.69
3678 4840 3.445518 CTCTGCGCTGCCCCGATTA 62.446 63.158 9.73 0.00 0.00 1.75
3682 4844 4.524318 CGCTGCCCCGATTACCGT 62.524 66.667 0.00 0.00 36.31 4.83
3691 4853 2.273557 CCCGATTACCGTCGTGATTTT 58.726 47.619 0.00 0.00 39.89 1.82
3694 4856 3.241868 CCGATTACCGTCGTGATTTTGTC 60.242 47.826 0.00 0.00 39.89 3.18
3715 4877 0.244178 GAGCCGAGGAAGACGAGTTT 59.756 55.000 0.00 0.00 0.00 2.66
3716 4878 0.680061 AGCCGAGGAAGACGAGTTTT 59.320 50.000 0.00 0.00 0.00 2.43
3717 4879 1.891150 AGCCGAGGAAGACGAGTTTTA 59.109 47.619 0.00 0.00 0.00 1.52
3720 4882 3.251571 CCGAGGAAGACGAGTTTTAAGG 58.748 50.000 0.00 0.00 0.00 2.69
3721 4883 3.057033 CCGAGGAAGACGAGTTTTAAGGA 60.057 47.826 0.00 0.00 0.00 3.36
3722 4884 4.381718 CCGAGGAAGACGAGTTTTAAGGAT 60.382 45.833 0.00 0.00 0.00 3.24
3723 4885 4.563184 CGAGGAAGACGAGTTTTAAGGATG 59.437 45.833 0.00 0.00 0.00 3.51
3725 4887 3.374367 GGAAGACGAGTTTTAAGGATGCC 59.626 47.826 0.00 0.00 0.00 4.40
3726 4888 3.983044 AGACGAGTTTTAAGGATGCCT 57.017 42.857 0.00 0.00 33.87 4.75
3727 4889 3.600388 AGACGAGTTTTAAGGATGCCTG 58.400 45.455 0.00 0.00 32.13 4.85
3728 4890 2.084546 ACGAGTTTTAAGGATGCCTGC 58.915 47.619 0.00 0.00 32.13 4.85
3770 4932 3.058160 GTGCTCCGCCAACATGCT 61.058 61.111 0.00 0.00 0.00 3.79
3773 4935 2.749044 CTCCGCCAACATGCTGCT 60.749 61.111 0.00 0.00 0.00 4.24
3774 4936 3.047718 CTCCGCCAACATGCTGCTG 62.048 63.158 0.00 0.00 0.00 4.41
3776 4938 2.126618 CGCCAACATGCTGCTGTG 60.127 61.111 0.00 2.56 0.00 3.66
3777 4939 2.431942 GCCAACATGCTGCTGTGC 60.432 61.111 0.00 0.66 0.00 4.57
3778 4940 2.126618 CCAACATGCTGCTGTGCG 60.127 61.111 0.00 0.00 35.36 5.34
3779 4941 2.640989 CAACATGCTGCTGTGCGT 59.359 55.556 0.00 0.00 35.36 5.24
3780 4942 1.441515 CAACATGCTGCTGTGCGTC 60.442 57.895 0.00 0.00 35.36 5.19
3781 4943 2.958204 AACATGCTGCTGTGCGTCG 61.958 57.895 0.00 0.00 35.36 5.12
3782 4944 4.806481 CATGCTGCTGTGCGTCGC 62.806 66.667 11.10 11.10 35.36 5.19
3806 4968 1.748122 CATTGCCAAGCTCGCCTCT 60.748 57.895 3.48 0.00 0.00 3.69
3860 5023 1.199615 GCAGGGGAGAAGAGCTTACT 58.800 55.000 0.00 0.00 0.00 2.24
3878 5041 1.416813 CTGCGTCTCTGCGATCCAAC 61.417 60.000 0.00 0.00 37.81 3.77
3883 5046 1.203523 GTCTCTGCGATCCAACAGTCT 59.796 52.381 5.29 0.00 35.37 3.24
3884 5047 1.474478 TCTCTGCGATCCAACAGTCTC 59.526 52.381 5.29 0.00 35.37 3.36
3885 5048 0.532573 TCTGCGATCCAACAGTCTCC 59.467 55.000 5.29 0.00 35.37 3.71
3886 5049 0.534412 CTGCGATCCAACAGTCTCCT 59.466 55.000 0.00 0.00 0.00 3.69
3887 5050 0.247460 TGCGATCCAACAGTCTCCTG 59.753 55.000 0.00 0.00 44.68 3.86
3888 5051 0.460987 GCGATCCAACAGTCTCCTGG 60.461 60.000 0.00 0.00 43.36 4.45
3889 5052 0.460987 CGATCCAACAGTCTCCTGGC 60.461 60.000 0.00 0.00 43.36 4.85
3890 5053 0.908198 GATCCAACAGTCTCCTGGCT 59.092 55.000 0.00 0.00 43.36 4.75
3891 5054 0.908198 ATCCAACAGTCTCCTGGCTC 59.092 55.000 0.00 0.00 43.36 4.70
3892 5055 1.194781 TCCAACAGTCTCCTGGCTCC 61.195 60.000 0.00 0.00 43.36 4.70
3893 5056 1.079543 CAACAGTCTCCTGGCTCCG 60.080 63.158 0.00 0.00 43.36 4.63
3894 5057 2.286523 AACAGTCTCCTGGCTCCGG 61.287 63.158 0.00 0.00 43.36 5.14
3916 5079 1.214589 CGAACGAGTCGGGGTCATT 59.785 57.895 18.30 0.00 46.45 2.57
3924 5087 3.158648 CGGGGTCATTAGGGGCGA 61.159 66.667 0.00 0.00 0.00 5.54
3929 5092 1.673808 GGTCATTAGGGGCGACGTCT 61.674 60.000 14.70 0.00 0.00 4.18
3961 5154 1.225168 AGGAGAGGATGTGATGGGGAT 59.775 52.381 0.00 0.00 0.00 3.85
4067 5262 3.123620 GCAGAAGCTCGGGCACAG 61.124 66.667 11.40 0.66 41.70 3.66
4071 5266 3.672295 GAAGCTCGGGCACAGGAGG 62.672 68.421 11.40 0.00 41.70 4.30
4079 5274 4.106925 GCACAGGAGGCAGGGAGG 62.107 72.222 0.00 0.00 0.00 4.30
4084 5279 4.095400 GGAGGCAGGGAGGGAGGA 62.095 72.222 0.00 0.00 0.00 3.71
4085 5280 2.288643 GAGGCAGGGAGGGAGGAT 59.711 66.667 0.00 0.00 0.00 3.24
4089 5284 1.074926 GCAGGGAGGGAGGATGAGA 60.075 63.158 0.00 0.00 0.00 3.27
4102 5297 0.856982 GATGAGAGAGAGGGAGGGGA 59.143 60.000 0.00 0.00 0.00 4.81
4107 5302 2.040359 GAGAGGGAGGGGAAGGGG 60.040 72.222 0.00 0.00 0.00 4.79
4135 5330 3.243336 CTTTCCCTAACTCAACGACTCG 58.757 50.000 0.00 0.00 0.00 4.18
4141 5336 3.058432 CCTAACTCAACGACTCGTCTCAA 60.058 47.826 4.17 0.00 39.99 3.02
4144 5339 2.358267 ACTCAACGACTCGTCTCAACTT 59.642 45.455 4.17 0.00 39.99 2.66
4145 5340 2.721603 CTCAACGACTCGTCTCAACTTG 59.278 50.000 4.17 0.00 39.99 3.16
4146 5341 2.098607 TCAACGACTCGTCTCAACTTGT 59.901 45.455 4.17 0.00 39.99 3.16
4147 5342 3.313249 TCAACGACTCGTCTCAACTTGTA 59.687 43.478 4.17 0.00 39.99 2.41
4148 5343 3.539431 ACGACTCGTCTCAACTTGTAG 57.461 47.619 0.00 0.00 33.69 2.74
4149 5344 2.243407 CGACTCGTCTCAACTTGTAGC 58.757 52.381 0.00 0.00 0.00 3.58
4150 5345 2.597520 GACTCGTCTCAACTTGTAGCC 58.402 52.381 0.00 0.00 0.00 3.93
4151 5346 1.272769 ACTCGTCTCAACTTGTAGCCC 59.727 52.381 0.00 0.00 0.00 5.19
4152 5347 1.546476 CTCGTCTCAACTTGTAGCCCT 59.454 52.381 0.00 0.00 0.00 5.19
4153 5348 1.272490 TCGTCTCAACTTGTAGCCCTG 59.728 52.381 0.00 0.00 0.00 4.45
4154 5349 1.443802 GTCTCAACTTGTAGCCCTGC 58.556 55.000 0.00 0.00 0.00 4.85
4155 5350 1.002544 GTCTCAACTTGTAGCCCTGCT 59.997 52.381 0.00 0.00 43.41 4.24
4156 5351 1.002430 TCTCAACTTGTAGCCCTGCTG 59.998 52.381 0.00 0.00 40.10 4.41
4157 5352 1.002430 CTCAACTTGTAGCCCTGCTGA 59.998 52.381 0.00 0.00 40.10 4.26
4158 5353 1.630369 TCAACTTGTAGCCCTGCTGAT 59.370 47.619 0.00 0.00 40.10 2.90
4159 5354 1.741706 CAACTTGTAGCCCTGCTGATG 59.258 52.381 0.00 0.00 40.10 3.07
4160 5355 0.987294 ACTTGTAGCCCTGCTGATGT 59.013 50.000 0.00 0.00 40.10 3.06
4161 5356 1.339438 ACTTGTAGCCCTGCTGATGTG 60.339 52.381 0.00 0.00 40.10 3.21
4162 5357 0.035152 TTGTAGCCCTGCTGATGTGG 60.035 55.000 0.00 0.00 40.10 4.17
4163 5358 1.821332 GTAGCCCTGCTGATGTGGC 60.821 63.158 0.00 0.00 44.35 5.01
4164 5359 2.300197 TAGCCCTGCTGATGTGGCA 61.300 57.895 10.38 0.00 46.45 4.92
4165 5360 2.541547 TAGCCCTGCTGATGTGGCAC 62.542 60.000 11.55 11.55 46.45 5.01
4166 5361 2.353958 CCCTGCTGATGTGGCACT 59.646 61.111 19.83 4.13 35.71 4.40
4167 5362 2.044555 CCCTGCTGATGTGGCACTG 61.045 63.158 19.83 7.57 35.71 3.66
4168 5363 2.697761 CCTGCTGATGTGGCACTGC 61.698 63.158 19.83 16.76 35.71 4.40
4178 5373 2.670934 GGCACTGCCCAGTCACAG 60.671 66.667 9.13 0.00 44.06 3.66
4179 5374 2.670934 GCACTGCCCAGTCACAGG 60.671 66.667 0.00 0.00 40.20 4.00
4186 5381 3.072476 CCAGTCACAGGGAGGGTG 58.928 66.667 0.00 0.00 37.60 4.61
4187 5382 1.536418 CCAGTCACAGGGAGGGTGA 60.536 63.158 0.00 0.00 42.62 4.02
4188 5383 1.548357 CCAGTCACAGGGAGGGTGAG 61.548 65.000 0.00 0.00 45.21 3.51
4189 5384 0.542938 CAGTCACAGGGAGGGTGAGA 60.543 60.000 0.00 0.00 45.21 3.27
4190 5385 0.252012 AGTCACAGGGAGGGTGAGAG 60.252 60.000 0.00 0.00 45.21 3.20
4191 5386 0.251832 GTCACAGGGAGGGTGAGAGA 60.252 60.000 0.00 0.00 45.21 3.10
4192 5387 0.040351 TCACAGGGAGGGTGAGAGAG 59.960 60.000 0.00 0.00 40.16 3.20
4193 5388 0.040351 CACAGGGAGGGTGAGAGAGA 59.960 60.000 0.00 0.00 38.54 3.10
4194 5389 0.334676 ACAGGGAGGGTGAGAGAGAG 59.665 60.000 0.00 0.00 0.00 3.20
4195 5390 0.396974 CAGGGAGGGTGAGAGAGAGG 60.397 65.000 0.00 0.00 0.00 3.69
4196 5391 1.075600 GGGAGGGTGAGAGAGAGGG 60.076 68.421 0.00 0.00 0.00 4.30
4197 5392 1.585651 GGGAGGGTGAGAGAGAGGGA 61.586 65.000 0.00 0.00 0.00 4.20
4198 5393 0.106217 GGAGGGTGAGAGAGAGGGAG 60.106 65.000 0.00 0.00 0.00 4.30
4199 5394 0.106217 GAGGGTGAGAGAGAGGGAGG 60.106 65.000 0.00 0.00 0.00 4.30
4200 5395 1.075600 GGGTGAGAGAGAGGGAGGG 60.076 68.421 0.00 0.00 0.00 4.30
4201 5396 1.075600 GGTGAGAGAGAGGGAGGGG 60.076 68.421 0.00 0.00 0.00 4.79
4202 5397 1.075600 GTGAGAGAGAGGGAGGGGG 60.076 68.421 0.00 0.00 0.00 5.40
4203 5398 1.230650 TGAGAGAGAGGGAGGGGGA 60.231 63.158 0.00 0.00 0.00 4.81
4204 5399 1.292941 TGAGAGAGAGGGAGGGGGAG 61.293 65.000 0.00 0.00 0.00 4.30
4205 5400 2.018086 AGAGAGAGGGAGGGGGAGG 61.018 68.421 0.00 0.00 0.00 4.30
4206 5401 3.039526 AGAGAGGGAGGGGGAGGG 61.040 72.222 0.00 0.00 0.00 4.30
4207 5402 4.179599 GAGAGGGAGGGGGAGGGG 62.180 77.778 0.00 0.00 0.00 4.79
4218 5413 3.462501 GGAGGGGGAGGGGGAGAT 61.463 72.222 0.00 0.00 0.00 2.75
4219 5414 2.122189 GAGGGGGAGGGGGAGATG 60.122 72.222 0.00 0.00 0.00 2.90
4220 5415 4.523282 AGGGGGAGGGGGAGATGC 62.523 72.222 0.00 0.00 0.00 3.91
4221 5416 4.523282 GGGGGAGGGGGAGATGCT 62.523 72.222 0.00 0.00 0.00 3.79
4222 5417 2.368878 GGGGAGGGGGAGATGCTT 60.369 66.667 0.00 0.00 0.00 3.91
4223 5418 2.009302 GGGGAGGGGGAGATGCTTT 61.009 63.158 0.00 0.00 0.00 3.51
4224 5419 1.534203 GGGAGGGGGAGATGCTTTC 59.466 63.158 0.00 0.00 0.00 2.62
4225 5420 1.534203 GGAGGGGGAGATGCTTTCC 59.466 63.158 0.00 0.00 0.00 3.13
4233 5428 3.914426 GGAGATGCTTTCCCTAACTCA 57.086 47.619 0.00 0.00 0.00 3.41
4234 5429 4.222124 GGAGATGCTTTCCCTAACTCAA 57.778 45.455 0.00 0.00 0.00 3.02
4235 5430 3.942115 GGAGATGCTTTCCCTAACTCAAC 59.058 47.826 0.00 0.00 0.00 3.18
4236 5431 3.600388 AGATGCTTTCCCTAACTCAACG 58.400 45.455 0.00 0.00 0.00 4.10
4237 5432 3.260884 AGATGCTTTCCCTAACTCAACGA 59.739 43.478 0.00 0.00 0.00 3.85
4238 5433 2.762745 TGCTTTCCCTAACTCAACGAC 58.237 47.619 0.00 0.00 0.00 4.34
4239 5434 2.367567 TGCTTTCCCTAACTCAACGACT 59.632 45.455 0.00 0.00 0.00 4.18
4240 5435 3.181458 TGCTTTCCCTAACTCAACGACTT 60.181 43.478 0.00 0.00 0.00 3.01
4241 5436 3.186613 GCTTTCCCTAACTCAACGACTTG 59.813 47.826 0.00 0.00 0.00 3.16
4242 5437 4.377897 CTTTCCCTAACTCAACGACTTGT 58.622 43.478 0.00 0.00 0.00 3.16
4243 5438 3.655276 TCCCTAACTCAACGACTTGTC 57.345 47.619 0.00 0.00 0.00 3.18
4244 5439 3.228453 TCCCTAACTCAACGACTTGTCT 58.772 45.455 0.00 0.00 0.00 3.41
4245 5440 3.255149 TCCCTAACTCAACGACTTGTCTC 59.745 47.826 0.00 0.00 0.00 3.36
4246 5441 3.005472 CCCTAACTCAACGACTTGTCTCA 59.995 47.826 0.00 0.00 0.00 3.27
4247 5442 4.500887 CCCTAACTCAACGACTTGTCTCAA 60.501 45.833 0.00 0.00 0.00 3.02
4248 5443 4.444720 CCTAACTCAACGACTTGTCTCAAC 59.555 45.833 0.00 0.00 0.00 3.18
4249 5444 3.802948 ACTCAACGACTTGTCTCAACT 57.197 42.857 0.00 0.00 0.00 3.16
4250 5445 4.124851 ACTCAACGACTTGTCTCAACTT 57.875 40.909 0.00 0.00 0.00 2.66
4251 5446 3.865745 ACTCAACGACTTGTCTCAACTTG 59.134 43.478 0.00 0.00 0.00 3.16
4252 5447 3.857052 TCAACGACTTGTCTCAACTTGT 58.143 40.909 0.00 0.00 0.00 3.16
4253 5448 5.001237 TCAACGACTTGTCTCAACTTGTA 57.999 39.130 0.00 0.00 0.00 2.41
4254 5449 5.041287 TCAACGACTTGTCTCAACTTGTAG 58.959 41.667 0.00 0.00 0.00 2.74
4255 5450 3.381949 ACGACTTGTCTCAACTTGTAGC 58.618 45.455 0.00 0.00 0.00 3.58
4256 5451 2.731976 CGACTTGTCTCAACTTGTAGCC 59.268 50.000 0.00 0.00 0.00 3.93
4257 5452 3.067833 GACTTGTCTCAACTTGTAGCCC 58.932 50.000 0.00 0.00 0.00 5.19
4291 5486 2.348998 CCCAGTCAGGCAGTCACC 59.651 66.667 0.00 0.00 35.39 4.02
4301 5496 2.029073 CAGTCACCGGTCAACGCT 59.971 61.111 2.59 0.00 42.52 5.07
4323 5518 2.095718 GTCAAAACCGCTTCATCTGGTC 60.096 50.000 0.00 0.00 34.11 4.02
4324 5519 1.135972 CAAAACCGCTTCATCTGGTCG 60.136 52.381 0.00 0.00 34.11 4.79
4328 5523 0.721718 CCGCTTCATCTGGTCGAAAC 59.278 55.000 0.00 0.00 0.00 2.78
4369 5565 2.067013 GAACCTGGTCGTTAGTTCAGC 58.933 52.381 0.00 0.00 38.74 4.26
4377 5573 3.044986 GTCGTTAGTTCAGCGTGTGTTA 58.955 45.455 0.00 0.00 31.98 2.41
4436 5636 2.949644 AGTGGCAAGTTCAGGTTGTAAC 59.050 45.455 0.00 0.00 0.00 2.50
4451 5651 5.011227 AGGTTGTAACTGGACTTCTCTCTTC 59.989 44.000 0.00 0.00 0.00 2.87
4458 5658 2.894126 TGGACTTCTCTCTTCACTGGAC 59.106 50.000 0.00 0.00 0.00 4.02
4478 5678 7.015877 ACTGGACAATTACTTGGTTAGTCAGTA 59.984 37.037 0.00 0.00 38.33 2.74
4500 5700 7.120579 CAGTATAGGCAGGTTCATAGTCTAGAG 59.879 44.444 0.00 0.00 0.00 2.43
4536 5736 0.102663 GTTAGTCGGTCTAGGCAGGC 59.897 60.000 0.00 0.00 0.00 4.85
4558 5758 2.696707 CCACAATTGGCTATGCTCCATT 59.303 45.455 10.83 0.00 35.56 3.16
4571 5771 0.464013 CTCCATTGCTGGCCTGAGAG 60.464 60.000 14.77 6.72 42.80 3.20
4572 5772 0.911045 TCCATTGCTGGCCTGAGAGA 60.911 55.000 14.77 0.00 42.80 3.10
4573 5773 0.747283 CCATTGCTGGCCTGAGAGAC 60.747 60.000 14.77 0.00 35.23 3.36
4574 5774 0.747283 CATTGCTGGCCTGAGAGACC 60.747 60.000 14.77 0.00 0.00 3.85
4575 5775 0.913451 ATTGCTGGCCTGAGAGACCT 60.913 55.000 14.77 0.00 0.00 3.85
4577 5777 1.986757 GCTGGCCTGAGAGACCTGA 60.987 63.158 14.77 0.00 0.00 3.86
4581 5781 1.612395 GGCCTGAGAGACCTGAGTGG 61.612 65.000 0.00 0.00 42.93 4.00
4585 5785 0.902048 TGAGAGACCTGAGTGGCCTG 60.902 60.000 3.32 0.00 40.22 4.85
4586 5786 0.613292 GAGAGACCTGAGTGGCCTGA 60.613 60.000 3.32 0.00 40.22 3.86
4587 5787 0.178921 AGAGACCTGAGTGGCCTGAA 60.179 55.000 3.32 0.00 40.22 3.02
4588 5788 0.248843 GAGACCTGAGTGGCCTGAAG 59.751 60.000 3.32 0.00 40.22 3.02
4589 5789 0.472734 AGACCTGAGTGGCCTGAAGT 60.473 55.000 3.32 0.00 40.22 3.01
4590 5790 0.398318 GACCTGAGTGGCCTGAAGTT 59.602 55.000 3.32 0.00 40.22 2.66
4591 5791 0.846693 ACCTGAGTGGCCTGAAGTTT 59.153 50.000 3.32 0.00 40.22 2.66
4592 5792 1.202818 ACCTGAGTGGCCTGAAGTTTC 60.203 52.381 3.32 0.00 40.22 2.78
4593 5793 1.202806 CCTGAGTGGCCTGAAGTTTCA 60.203 52.381 3.32 0.00 35.57 2.69
4594 5794 2.553904 CCTGAGTGGCCTGAAGTTTCAT 60.554 50.000 3.32 0.00 36.46 2.57
4595 5795 2.486982 CTGAGTGGCCTGAAGTTTCATG 59.513 50.000 3.32 0.00 36.46 3.07
4596 5796 1.815003 GAGTGGCCTGAAGTTTCATGG 59.185 52.381 3.32 1.43 36.46 3.66
4597 5797 0.890683 GTGGCCTGAAGTTTCATGGG 59.109 55.000 3.32 4.83 36.46 4.00
4598 5798 0.482446 TGGCCTGAAGTTTCATGGGT 59.518 50.000 3.32 0.00 36.46 4.51
4599 5799 0.890683 GGCCTGAAGTTTCATGGGTG 59.109 55.000 0.00 0.00 36.46 4.61
4600 5800 0.244721 GCCTGAAGTTTCATGGGTGC 59.755 55.000 0.00 0.00 36.46 5.01
4601 5801 1.619654 CCTGAAGTTTCATGGGTGCA 58.380 50.000 0.00 0.00 36.46 4.57
4661 5861 4.009675 CACAAGCATAGTAAGGCCTGAAA 58.990 43.478 5.69 0.00 31.05 2.69
4684 5884 5.678132 TTTCGCTATGATGGTCATTCATG 57.322 39.130 0.00 0.00 38.26 3.07
4685 5885 4.605640 TCGCTATGATGGTCATTCATGA 57.394 40.909 0.00 0.00 38.26 3.07
4713 5990 3.821033 ACAACAGACCTGGAAATGCTTAC 59.179 43.478 0.00 0.00 34.19 2.34
4719 5997 5.010282 AGACCTGGAAATGCTTACGATTTT 58.990 37.500 0.00 0.00 0.00 1.82
4721 5999 4.082245 ACCTGGAAATGCTTACGATTTTGG 60.082 41.667 0.00 0.00 0.00 3.28
4725 6003 3.757745 AATGCTTACGATTTTGGGACG 57.242 42.857 0.00 0.00 0.00 4.79
4752 6030 6.070021 TGGTCTTGAATGTCAGGTTATCAGAT 60.070 38.462 0.00 0.00 0.00 2.90
4757 6035 2.809446 TGTCAGGTTATCAGATTCGCG 58.191 47.619 0.00 0.00 0.00 5.87
4774 6052 1.937223 CGCGGTTGCATTCCACTAATA 59.063 47.619 0.00 0.00 42.97 0.98
4780 6058 6.019881 GCGGTTGCATTCCACTAATAATTTTC 60.020 38.462 8.76 0.00 42.15 2.29
4781 6059 7.257722 CGGTTGCATTCCACTAATAATTTTCT 58.742 34.615 8.76 0.00 0.00 2.52
4785 6063 9.651913 TTGCATTCCACTAATAATTTTCTTTCC 57.348 29.630 0.00 0.00 0.00 3.13
4786 6064 8.811017 TGCATTCCACTAATAATTTTCTTTCCA 58.189 29.630 0.00 0.00 0.00 3.53
4787 6065 9.822185 GCATTCCACTAATAATTTTCTTTCCAT 57.178 29.630 0.00 0.00 0.00 3.41
4838 6117 3.994392 CCACATTTGTTAGTACTGCTCGT 59.006 43.478 5.39 0.00 0.00 4.18
4841 6120 6.400727 CCACATTTGTTAGTACTGCTCGTTAC 60.401 42.308 5.39 0.00 0.00 2.50
4856 6135 1.653151 GTTACTGGACCGAGGCATTC 58.347 55.000 0.00 0.00 0.00 2.67
4900 6179 5.448632 GCATGGAAGAAAAGGTACGGTTATG 60.449 44.000 0.00 0.00 0.00 1.90
4923 6202 7.114866 TGAAACCGTATATCATGTACAGGAA 57.885 36.000 15.00 4.71 0.00 3.36
4929 6208 6.447162 CGTATATCATGTACAGGAAAGCTGA 58.553 40.000 15.00 4.89 0.00 4.26
4944 6223 5.447818 GGAAAGCTGACTATTTGGATGAACG 60.448 44.000 0.00 0.00 0.00 3.95
4950 6229 5.483811 TGACTATTTGGATGAACGTTAGCA 58.516 37.500 0.00 0.00 0.00 3.49
4958 6237 4.819630 TGGATGAACGTTAGCAAATATCCC 59.180 41.667 0.00 0.00 33.58 3.85
4967 6246 2.446435 AGCAAATATCCCGTTTGTGCT 58.554 42.857 0.00 0.00 38.49 4.40
4968 6247 2.164219 AGCAAATATCCCGTTTGTGCTG 59.836 45.455 0.00 0.00 38.49 4.41
4969 6248 2.735126 GCAAATATCCCGTTTGTGCTGG 60.735 50.000 0.00 0.00 38.49 4.85
5030 6309 3.984193 ATGGTGAGAAGCGCCCTGC 62.984 63.158 2.29 0.00 46.97 4.85
5118 6397 5.295787 TGGCCTATAAGAAGTGTAAATTGCG 59.704 40.000 3.32 0.00 0.00 4.85
5119 6398 5.526111 GGCCTATAAGAAGTGTAAATTGCGA 59.474 40.000 0.00 0.00 0.00 5.10
5189 6468 1.882308 TCCGGTTTGGCCTATAGGAA 58.118 50.000 23.61 5.87 37.80 3.36
5191 6470 1.210967 CCGGTTTGGCCTATAGGAACA 59.789 52.381 23.61 16.70 37.39 3.18
5252 6537 5.950758 AGAGTGCCTATCATAACTAGACG 57.049 43.478 0.00 0.00 0.00 4.18
5289 6574 5.013495 TGTCTTCTCATTCTCATGGTTCCTT 59.987 40.000 0.00 0.00 0.00 3.36
5294 6579 3.200825 TCATTCTCATGGTTCCTTCCCTC 59.799 47.826 0.00 0.00 0.00 4.30
5295 6580 1.584724 TCTCATGGTTCCTTCCCTCC 58.415 55.000 0.00 0.00 0.00 4.30
5337 6622 0.953960 GCAGGGTCGTGTCGGATTTT 60.954 55.000 0.00 0.00 0.00 1.82
5341 6626 1.231958 GGTCGTGTCGGATTTTGCCA 61.232 55.000 0.00 0.00 0.00 4.92
5348 6633 2.031857 TGTCGGATTTTGCCACGTTTAC 60.032 45.455 0.00 0.00 0.00 2.01
5400 6713 7.390027 GCCATATATCAGGTAGAGTTGTGATT 58.610 38.462 0.00 0.00 32.01 2.57
5411 6724 3.003689 AGAGTTGTGATTTTGGCTGTTCG 59.996 43.478 0.00 0.00 0.00 3.95
5436 6749 1.071471 CGGGAAAGCCTGTGTGTCT 59.929 57.895 0.00 0.00 35.70 3.41
5449 6762 1.949525 GTGTGTCTGGTGATTGTGCTT 59.050 47.619 0.00 0.00 0.00 3.91
5464 6777 4.799564 TGTGCTTTGAGTTTCTTGGTTT 57.200 36.364 0.00 0.00 0.00 3.27
5469 6782 0.383949 TGAGTTTCTTGGTTTGGCGC 59.616 50.000 0.00 0.00 0.00 6.53
5491 6812 2.393768 CGCTTGACGCCATGAAGCT 61.394 57.895 12.60 0.00 40.00 3.74
5493 6814 0.242017 GCTTGACGCCATGAAGCTTT 59.758 50.000 0.00 0.00 39.24 3.51
5515 6836 5.818136 TTTTCTGTCTGAAAACCACTCAG 57.182 39.130 12.19 0.00 46.20 3.35
5516 6837 4.753516 TTCTGTCTGAAAACCACTCAGA 57.246 40.909 0.00 0.00 45.50 3.27
5521 6842 3.914312 TCTGAAAACCACTCAGACGATC 58.086 45.455 0.00 0.00 43.41 3.69
5533 6854 2.428171 TCAGACGATCATGAGTGCATCA 59.572 45.455 0.09 0.00 43.70 3.07
5541 6862 0.037046 ATGAGTGCATCACGTCTGCA 60.037 50.000 16.24 16.24 46.82 4.41
5551 6872 3.190849 CGTCTGCATGCCGGAGTG 61.191 66.667 16.68 3.38 34.03 3.51
5556 6877 3.503363 GCATGCCGGAGTGCTGAC 61.503 66.667 20.33 0.00 38.30 3.51
5576 6915 2.025321 ACCTTGGTTGTTTCTGTGTCCT 60.025 45.455 0.00 0.00 0.00 3.85
5586 6925 2.462456 TCTGTGTCCTGTGAGATTGC 57.538 50.000 0.00 0.00 0.00 3.56
5597 6936 0.390340 TGAGATTGCGCTTTCGAGCT 60.390 50.000 9.73 0.00 36.84 4.09
5603 6942 0.235665 TGCGCTTTCGAGCTTCTTTG 59.764 50.000 9.73 0.00 36.84 2.77
5624 6966 2.161855 CCATGCAGCTTGTTCCTGTTA 58.838 47.619 7.47 0.00 32.93 2.41
5655 6997 2.945008 TGCTGACTGAAAACCACTCAAG 59.055 45.455 0.00 0.00 0.00 3.02
5675 7017 2.789203 GACAGAATGGTCGCGTCGC 61.789 63.158 7.29 7.29 43.62 5.19
5726 7068 0.704076 TACAGGAAATGGCTGGGCTT 59.296 50.000 0.00 0.00 0.00 4.35
5750 7092 0.460284 CACCGCATCCTACACTGACC 60.460 60.000 0.00 0.00 0.00 4.02
5763 7105 1.376424 CTGACCAGTGCAGCCGAAT 60.376 57.895 0.00 0.00 0.00 3.34
5774 7116 2.419673 TGCAGCCGAATACACAAAGATG 59.580 45.455 0.00 0.00 0.00 2.90
5775 7117 2.223340 GCAGCCGAATACACAAAGATGG 60.223 50.000 0.00 0.00 0.00 3.51
5832 7175 6.489361 GGGATTCAGCTTGATGATTAAGACAT 59.511 38.462 0.68 0.00 0.00 3.06
5833 7176 7.308469 GGGATTCAGCTTGATGATTAAGACATC 60.308 40.741 14.56 14.56 42.81 3.06
5834 7177 6.594284 TTCAGCTTGATGATTAAGACATCG 57.406 37.500 15.67 7.77 44.64 3.84
5835 7178 4.509230 TCAGCTTGATGATTAAGACATCGC 59.491 41.667 15.67 14.07 44.64 4.58
5836 7179 4.271776 CAGCTTGATGATTAAGACATCGCA 59.728 41.667 17.92 9.97 44.64 5.10
5837 7180 4.877823 AGCTTGATGATTAAGACATCGCAA 59.122 37.500 17.92 10.62 44.64 4.85
5838 7181 5.530171 AGCTTGATGATTAAGACATCGCAAT 59.470 36.000 17.92 7.20 44.64 3.56
5839 7182 6.039047 AGCTTGATGATTAAGACATCGCAATT 59.961 34.615 17.92 6.13 44.64 2.32
5920 7448 7.576856 GCAATGATTGAGCCATCATTATCATCA 60.577 37.037 9.76 3.81 43.36 3.07
5921 7449 6.812879 TGATTGAGCCATCATTATCATCAC 57.187 37.500 0.00 0.00 30.96 3.06
5943 7471 0.036952 CTTGCGTGACCTCCATCTGT 60.037 55.000 0.00 0.00 0.00 3.41
5970 7498 5.221130 GTCTGCGATAATAACAGGGAGTAC 58.779 45.833 0.00 0.00 32.19 2.73
5971 7499 4.280174 TCTGCGATAATAACAGGGAGTACC 59.720 45.833 0.00 0.00 40.67 3.34
6014 7548 0.040067 GCACCAAGAAACAAGGAGCG 60.040 55.000 0.00 0.00 29.78 5.03
6045 7579 2.202557 TGGTGACGAGCGCATACG 60.203 61.111 11.47 15.05 44.07 3.06
6046 7580 2.202570 GGTGACGAGCGCATACGT 60.203 61.111 22.35 22.35 45.32 3.57
6047 7581 2.505498 GGTGACGAGCGCATACGTG 61.505 63.158 25.77 5.67 42.74 4.49
6059 7593 1.750193 CATACGTGCATTGAAGGGGT 58.250 50.000 0.00 0.00 0.00 4.95
6060 7594 2.091541 CATACGTGCATTGAAGGGGTT 58.908 47.619 0.00 0.00 0.00 4.11
6061 7595 1.816074 TACGTGCATTGAAGGGGTTC 58.184 50.000 0.00 0.00 0.00 3.62
6062 7596 0.110486 ACGTGCATTGAAGGGGTTCT 59.890 50.000 0.00 0.00 0.00 3.01
6063 7597 1.349688 ACGTGCATTGAAGGGGTTCTA 59.650 47.619 0.00 0.00 0.00 2.10
6064 7598 1.737793 CGTGCATTGAAGGGGTTCTAC 59.262 52.381 0.00 0.00 0.00 2.59
6065 7599 1.737793 GTGCATTGAAGGGGTTCTACG 59.262 52.381 0.00 0.00 0.00 3.51
6066 7600 1.349688 TGCATTGAAGGGGTTCTACGT 59.650 47.619 0.00 0.00 0.00 3.57
6067 7601 2.568062 TGCATTGAAGGGGTTCTACGTA 59.432 45.455 0.00 0.00 0.00 3.57
6068 7602 2.934553 GCATTGAAGGGGTTCTACGTAC 59.065 50.000 0.00 0.00 0.00 3.67
6069 7603 3.369157 GCATTGAAGGGGTTCTACGTACT 60.369 47.826 0.00 0.00 0.00 2.73
6070 7604 4.430908 CATTGAAGGGGTTCTACGTACTC 58.569 47.826 0.00 0.00 0.00 2.59
6071 7605 2.450476 TGAAGGGGTTCTACGTACTCC 58.550 52.381 0.00 0.00 36.33 3.85
6073 7607 2.140839 AGGGGTTCTACGTACTCCTG 57.859 55.000 7.60 0.00 44.86 3.86
6074 7608 0.459078 GGGGTTCTACGTACTCCTGC 59.541 60.000 0.00 0.00 33.14 4.85
6075 7609 0.459078 GGGTTCTACGTACTCCTGCC 59.541 60.000 0.00 0.00 0.00 4.85
6076 7610 0.100146 GGTTCTACGTACTCCTGCCG 59.900 60.000 0.00 0.00 0.00 5.69
6077 7611 0.525029 GTTCTACGTACTCCTGCCGC 60.525 60.000 0.00 0.00 0.00 6.53
6078 7612 1.660560 TTCTACGTACTCCTGCCGCC 61.661 60.000 0.00 0.00 0.00 6.13
6079 7613 2.361483 TACGTACTCCTGCCGCCA 60.361 61.111 0.00 0.00 0.00 5.69
6080 7614 1.940883 CTACGTACTCCTGCCGCCAA 61.941 60.000 0.00 0.00 0.00 4.52
6081 7615 1.940883 TACGTACTCCTGCCGCCAAG 61.941 60.000 0.00 0.00 0.00 3.61
6082 7616 2.978824 GTACTCCTGCCGCCAAGA 59.021 61.111 0.00 0.00 0.00 3.02
6083 7617 1.295423 GTACTCCTGCCGCCAAGAA 59.705 57.895 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 5.197451 TCCAATTATAGGTTGGTTCGCAAT 58.803 37.500 14.91 0.00 45.05 3.56
74 75 6.493166 TCATTGTCCTCCTAACAATCCAATT 58.507 36.000 0.00 0.00 43.62 2.32
82 83 5.223655 TGGGATATCATTGTCCTCCTAACA 58.776 41.667 4.83 0.00 33.77 2.41
150 154 2.093890 TCATGAAAATGCGAGCACCAT 58.906 42.857 0.00 0.00 0.00 3.55
170 175 5.717119 TCGTCGGAAGAGCTAAACTAAATT 58.283 37.500 0.00 0.00 43.49 1.82
176 181 2.599082 CACATCGTCGGAAGAGCTAAAC 59.401 50.000 0.00 0.00 43.49 2.01
183 188 1.338655 TGAACACACATCGTCGGAAGA 59.661 47.619 0.00 0.00 38.16 2.87
218 223 5.034852 TGAGATTGACAAAGTCTCCACAA 57.965 39.130 13.70 0.00 38.04 3.33
224 229 7.119407 CACATCATCTTGAGATTGACAAAGTCT 59.881 37.037 0.00 0.00 30.78 3.24
259 264 2.605366 GACGCTCATACTTTCAAGAGGC 59.395 50.000 0.00 0.00 0.00 4.70
260 265 4.116747 AGACGCTCATACTTTCAAGAGG 57.883 45.455 0.00 0.00 0.00 3.69
265 270 9.459640 GTATATACAAAGACGCTCATACTTTCA 57.540 33.333 8.05 0.00 32.59 2.69
367 382 6.995511 AGAGACGGATAGAGCATAAGATAC 57.004 41.667 0.00 0.00 0.00 2.24
398 413 4.293415 GCCAATCGAGCAATTTATCCTTG 58.707 43.478 0.00 0.00 0.00 3.61
414 431 0.589223 TTCGTTGACGTTGGCCAATC 59.411 50.000 23.66 16.80 40.80 2.67
462 482 2.669364 ACAAAGTGACGTCGTGGTATC 58.331 47.619 11.62 0.00 0.00 2.24
569 598 3.381949 CCAAAGTCTCGTCGAGTTCTTT 58.618 45.455 26.07 26.07 36.41 2.52
664 694 0.821301 TTGCCACGCCAACATTCTCA 60.821 50.000 0.00 0.00 0.00 3.27
700 730 3.716872 TGTGTCTTCCTTTCTTTCCTCCT 59.283 43.478 0.00 0.00 0.00 3.69
717 761 2.204237 CTTTGGCTTTGGCTTTGTGTC 58.796 47.619 0.00 0.00 38.73 3.67
736 780 0.112995 TGACTGGATTGGCTTTGGCT 59.887 50.000 0.00 0.00 38.73 4.75
737 781 0.529378 CTGACTGGATTGGCTTTGGC 59.471 55.000 0.00 0.00 37.82 4.52
738 782 1.815003 GTCTGACTGGATTGGCTTTGG 59.185 52.381 0.00 0.00 0.00 3.28
739 783 1.466167 CGTCTGACTGGATTGGCTTTG 59.534 52.381 6.21 0.00 0.00 2.77
741 785 0.036010 CCGTCTGACTGGATTGGCTT 60.036 55.000 11.57 0.00 0.00 4.35
742 786 0.904865 TCCGTCTGACTGGATTGGCT 60.905 55.000 14.47 0.00 0.00 4.75
743 787 0.179000 ATCCGTCTGACTGGATTGGC 59.821 55.000 20.76 0.00 42.31 4.52
744 788 4.342862 AATATCCGTCTGACTGGATTGG 57.657 45.455 26.93 12.97 42.31 3.16
745 789 6.683974 AAAAATATCCGTCTGACTGGATTG 57.316 37.500 26.93 5.59 42.31 2.67
767 811 4.482386 CGTCTGACTGGATCGTCTAAAAA 58.518 43.478 6.21 0.00 35.00 1.94
768 812 3.119602 CCGTCTGACTGGATCGTCTAAAA 60.120 47.826 11.57 0.00 35.00 1.52
769 813 2.422479 CCGTCTGACTGGATCGTCTAAA 59.578 50.000 11.57 0.00 35.00 1.85
858 902 2.026822 AGCTGTATGTAGTGCTGCCTTT 60.027 45.455 0.00 0.00 37.96 3.11
861 905 1.576356 GAGCTGTATGTAGTGCTGCC 58.424 55.000 0.00 0.00 37.96 4.85
991 1051 0.611062 ACGTCCACCATCTTCTCCGA 60.611 55.000 0.00 0.00 0.00 4.55
1179 1240 2.060980 GGAGATGGCGAGACCTGGT 61.061 63.158 0.00 0.00 40.22 4.00
1199 1260 2.598467 GCGGAGAGGAGAGAGGGA 59.402 66.667 0.00 0.00 0.00 4.20
1265 1331 4.502087 CGACATCCCAATCTAGCAGAATCA 60.502 45.833 0.00 0.00 0.00 2.57
1357 1423 2.027385 GCCTGCCCAAAAAGATCCTAG 58.973 52.381 0.00 0.00 0.00 3.02
1366 1432 4.572571 ACGGACGCCTGCCCAAAA 62.573 61.111 0.00 0.00 0.00 2.44
1428 1494 3.152341 CTGCAGAATTCCAACCTGAAGT 58.848 45.455 8.42 0.00 30.67 3.01
1468 1534 5.641709 TCTTCACATTACAAAAACGCAACA 58.358 33.333 0.00 0.00 0.00 3.33
1473 1539 7.113404 CCACAATCTCTTCACATTACAAAAACG 59.887 37.037 0.00 0.00 0.00 3.60
1500 1566 0.035739 TCTCATGCTGCTGCTCAACA 59.964 50.000 17.00 0.00 40.48 3.33
1517 1583 0.389391 CCTATGACGCGGGATGTTCT 59.611 55.000 12.47 0.00 0.00 3.01
1518 1584 0.600255 CCCTATGACGCGGGATGTTC 60.600 60.000 12.47 0.00 43.44 3.18
1528 1594 2.605094 CAATCCGTGCCCTATGACG 58.395 57.895 0.00 0.00 35.31 4.35
1566 1632 5.776716 ACACAGATGATTCTTTTTGGTCCAT 59.223 36.000 0.00 0.00 0.00 3.41
1660 2283 1.133790 CTATTGCTTTGGCTGCCACTC 59.866 52.381 23.30 13.54 39.59 3.51
1662 2285 0.459063 GCTATTGCTTTGGCTGCCAC 60.459 55.000 23.30 11.07 39.59 5.01
1663 2286 1.892338 GCTATTGCTTTGGCTGCCA 59.108 52.632 19.30 19.30 39.59 4.92
1677 2300 7.056635 ACAATAGTAGCATTTTCCACAGCTAT 58.943 34.615 0.00 0.00 41.14 2.97
1678 2301 6.414732 ACAATAGTAGCATTTTCCACAGCTA 58.585 36.000 0.00 0.00 38.47 3.32
1790 2413 2.948315 CCATAGGCAGAAGGAAAGCTTC 59.052 50.000 0.00 0.00 0.00 3.86
1804 2427 5.867174 GGAATACAAACAACAAACCATAGGC 59.133 40.000 0.00 0.00 0.00 3.93
1808 2431 6.326323 AGAAGGGAATACAAACAACAAACCAT 59.674 34.615 0.00 0.00 0.00 3.55
1854 2477 5.243981 ACAGACAAGAACATTCAGATCCTG 58.756 41.667 0.00 0.00 0.00 3.86
2018 2646 6.594788 AAGACTATGCCAACATTGAAACAT 57.405 33.333 0.00 0.00 37.74 2.71
2068 2696 0.395724 GGATGACTCGCCCCCATTTT 60.396 55.000 0.00 0.00 0.00 1.82
2115 2743 8.891671 AACTCATTGCAAATACAAGAACAATT 57.108 26.923 1.71 0.00 31.96 2.32
2117 2745 7.594758 GCTAACTCATTGCAAATACAAGAACAA 59.405 33.333 1.71 0.00 31.96 2.83
2142 2770 1.004080 TCAGTCAGGAAGCAGCAGC 60.004 57.895 0.00 0.00 42.56 5.25
2462 3095 3.643792 CCCGAGGAATAGGAAATCTCAGT 59.356 47.826 0.00 0.00 0.00 3.41
2507 3140 6.306987 AGGAGAAAGAAATGCCTGAGTTAAA 58.693 36.000 0.00 0.00 0.00 1.52
2510 3143 4.379302 AGGAGAAAGAAATGCCTGAGTT 57.621 40.909 0.00 0.00 0.00 3.01
2578 3211 3.073274 AGGGGTGTTAAATGCTCAGTC 57.927 47.619 0.00 0.00 0.00 3.51
2730 3363 3.871594 CCGTTCACTCTACCATTTCATCC 59.128 47.826 0.00 0.00 0.00 3.51
2736 3369 5.069501 GAACTACCGTTCACTCTACCATT 57.930 43.478 0.68 0.00 46.88 3.16
2748 3381 4.281688 TGCTAACTAACCAGAACTACCGTT 59.718 41.667 0.00 0.00 35.68 4.44
2797 3430 6.908870 TCAATTACATGACATACACAGAGC 57.091 37.500 0.00 0.00 0.00 4.09
2885 3518 8.142485 ACCTGCTTAGGTTAGTAAACAATCTA 57.858 34.615 0.00 0.00 39.57 1.98
2905 3538 0.181350 ATCCTCCATTTCCGACCTGC 59.819 55.000 0.00 0.00 0.00 4.85
2960 3593 6.830873 ACTCCTAACTTTTACTCGCTAAGA 57.169 37.500 0.00 0.00 0.00 2.10
2991 3626 5.126061 CCCAGCTGAGTTTGTTGCTTATATT 59.874 40.000 17.39 0.00 33.03 1.28
3057 3692 5.122396 GCAAGTTCAGGGTTCTAATGTGTAG 59.878 44.000 0.00 0.00 0.00 2.74
3059 3694 3.821033 GCAAGTTCAGGGTTCTAATGTGT 59.179 43.478 0.00 0.00 0.00 3.72
3067 3702 1.239347 GAGTGGCAAGTTCAGGGTTC 58.761 55.000 0.00 0.00 0.00 3.62
3098 3733 3.118702 TCGTTAGTTCAGGGTGTGTTTCA 60.119 43.478 0.00 0.00 0.00 2.69
3146 4015 1.388547 TCAGGTGTGGTCAAAACTGC 58.611 50.000 1.41 0.00 0.00 4.40
3148 4017 2.024414 GCTTCAGGTGTGGTCAAAACT 58.976 47.619 0.00 0.00 0.00 2.66
3169 4038 2.441750 TGCCCTACTTGAGGTCAAAACT 59.558 45.455 0.00 0.00 45.03 2.66
3179 4048 1.297689 CAGCTGCTGCCCTACTTGA 59.702 57.895 17.73 0.00 40.80 3.02
3225 4134 3.086600 GGGGAGGGCTCAGGACAG 61.087 72.222 0.00 0.00 0.00 3.51
3226 4135 4.741239 GGGGGAGGGCTCAGGACA 62.741 72.222 0.00 0.00 0.00 4.02
3227 4136 4.741239 TGGGGGAGGGCTCAGGAC 62.741 72.222 0.00 0.00 0.00 3.85
3228 4137 4.741239 GTGGGGGAGGGCTCAGGA 62.741 72.222 0.00 0.00 0.00 3.86
3276 4376 2.276493 CTCGTAGACGTGTCGCGG 60.276 66.667 6.13 0.00 46.52 6.46
3278 4378 1.126996 GAAGCTCGTAGACGTGTCGC 61.127 60.000 0.00 1.86 40.80 5.19
3280 4380 1.977412 GTTGAAGCTCGTAGACGTGTC 59.023 52.381 0.00 0.00 40.80 3.67
3282 4382 0.975544 CGTTGAAGCTCGTAGACGTG 59.024 55.000 0.00 0.67 40.80 4.49
3283 4383 0.109873 CCGTTGAAGCTCGTAGACGT 60.110 55.000 1.46 0.00 40.80 4.34
3284 4384 0.109873 ACCGTTGAAGCTCGTAGACG 60.110 55.000 0.00 0.00 41.45 4.18
3323 4450 1.139734 CGTGTCGGCTATGAGCAGT 59.860 57.895 0.21 0.00 44.75 4.40
3339 4466 3.152400 GGTGGCTACCGGATCCGT 61.152 66.667 31.22 21.20 37.19 4.69
3376 4503 3.771160 GGTGACCGGATCCACGCT 61.771 66.667 9.46 0.00 34.30 5.07
3396 4523 2.107750 AGCATGATGGAGACCGCG 59.892 61.111 0.00 0.00 0.00 6.46
3398 4525 1.890979 GGCAGCATGATGGAGACCG 60.891 63.158 13.73 0.00 39.69 4.79
3399 4526 0.818445 CAGGCAGCATGATGGAGACC 60.818 60.000 13.73 5.13 39.69 3.85
3402 4529 3.008141 CTCAGGCAGCATGATGGAG 57.992 57.895 10.80 7.18 39.69 3.86
3473 4600 0.552848 GCTGGAATTGATGGGAGGGA 59.447 55.000 0.00 0.00 0.00 4.20
3502 4629 4.029186 CTGCTTTGCTTCGGCGCA 62.029 61.111 10.83 0.00 45.37 6.09
3504 4631 2.477845 CTCTGCTTTGCTTCGGCG 59.522 61.111 0.00 0.00 45.37 6.46
3528 4655 3.760035 CTGCGCTACTCCACCGGT 61.760 66.667 9.73 0.00 0.00 5.28
3567 4697 1.437625 GAGGAAGACTGTTGCTGCTC 58.562 55.000 0.00 0.00 0.00 4.26
3577 4707 1.882989 GCTGGACAGCGAGGAAGACT 61.883 60.000 8.72 0.00 45.29 3.24
3578 4708 1.446966 GCTGGACAGCGAGGAAGAC 60.447 63.158 8.72 0.00 45.29 3.01
3579 4709 2.973899 GCTGGACAGCGAGGAAGA 59.026 61.111 8.72 0.00 45.29 2.87
3596 4757 0.175302 CTGCTGCTACTCTCCCACAG 59.825 60.000 0.00 0.00 0.00 3.66
3599 4760 1.610379 TGCTGCTGCTACTCTCCCA 60.610 57.895 17.00 0.00 40.48 4.37
3663 4825 4.849310 GGTAATCGGGGCAGCGCA 62.849 66.667 11.47 0.00 0.00 6.09
3678 4840 0.032403 TCCGACAAAATCACGACGGT 59.968 50.000 0.00 0.00 40.56 4.83
3682 4844 1.011968 CGGCTCCGACAAAATCACGA 61.012 55.000 1.35 0.00 42.83 4.35
3691 4853 2.035155 TCTTCCTCGGCTCCGACA 59.965 61.111 6.95 0.00 44.01 4.35
3694 4856 3.114647 CTCGTCTTCCTCGGCTCCG 62.115 68.421 1.14 1.14 41.35 4.63
3764 4926 3.417224 CGACGCACAGCAGCATGT 61.417 61.111 0.00 0.00 39.31 3.21
3780 4942 4.817063 CTTGGCAATGTCGCGGCG 62.817 66.667 17.70 17.70 0.00 6.46
3782 4944 3.386867 GAGCTTGGCAATGTCGCGG 62.387 63.158 6.13 0.00 0.00 6.46
3783 4945 2.099062 GAGCTTGGCAATGTCGCG 59.901 61.111 0.00 0.00 0.00 5.87
3784 4946 2.099062 CGAGCTTGGCAATGTCGC 59.901 61.111 15.62 9.29 0.00 5.19
3785 4947 2.099062 GCGAGCTTGGCAATGTCG 59.901 61.111 20.88 20.88 0.00 4.35
3790 4952 2.359107 CAGAGGCGAGCTTGGCAA 60.359 61.111 27.85 0.00 36.77 4.52
3791 4953 4.399395 CCAGAGGCGAGCTTGGCA 62.399 66.667 27.85 0.00 36.77 4.92
3824 4986 4.169696 CCCCGTCCCGCTTGCATA 62.170 66.667 0.00 0.00 0.00 3.14
3835 4998 3.787001 CTTCTCCCCTGCCCCGTC 61.787 72.222 0.00 0.00 0.00 4.79
3836 4999 4.332543 TCTTCTCCCCTGCCCCGT 62.333 66.667 0.00 0.00 0.00 5.28
3845 5008 0.533032 ACGCAGTAAGCTCTTCTCCC 59.467 55.000 0.00 0.00 41.94 4.30
3860 5023 1.446099 GTTGGATCGCAGAGACGCA 60.446 57.895 0.00 0.00 43.63 5.24
3866 5029 0.532573 GGAGACTGTTGGATCGCAGA 59.467 55.000 14.69 0.00 45.75 4.26
3899 5062 1.202382 CCTAATGACCCCGACTCGTTC 60.202 57.143 0.00 0.00 0.00 3.95
3908 5071 2.509422 GTCGCCCCTAATGACCCC 59.491 66.667 0.00 0.00 0.00 4.95
3909 5072 2.108362 CGTCGCCCCTAATGACCC 59.892 66.667 0.00 0.00 0.00 4.46
3914 5077 3.090219 GCCAGACGTCGCCCCTAAT 62.090 63.158 10.46 0.00 0.00 1.73
4039 5232 2.674380 CTTCTGCCCACAGCCACC 60.674 66.667 0.00 0.00 44.10 4.61
4051 5246 2.435586 CCTGTGCCCGAGCTTCTG 60.436 66.667 0.00 0.00 40.80 3.02
4053 5248 2.125350 CTCCTGTGCCCGAGCTTC 60.125 66.667 0.00 0.00 40.80 3.86
4065 5260 2.767496 CTCCCTCCCTGCCTCCTG 60.767 72.222 0.00 0.00 0.00 3.86
4067 5262 3.418623 ATCCTCCCTCCCTGCCTCC 62.419 68.421 0.00 0.00 0.00 4.30
4071 5266 1.074926 TCTCATCCTCCCTCCCTGC 60.075 63.158 0.00 0.00 0.00 4.85
4072 5267 0.560193 TCTCTCATCCTCCCTCCCTG 59.440 60.000 0.00 0.00 0.00 4.45
4075 5270 1.203050 CCTCTCTCTCATCCTCCCTCC 60.203 61.905 0.00 0.00 0.00 4.30
4079 5274 1.203050 CCTCCCTCTCTCTCATCCTCC 60.203 61.905 0.00 0.00 0.00 4.30
4084 5279 1.220236 CTTCCCCTCCCTCTCTCTCAT 59.780 57.143 0.00 0.00 0.00 2.90
4085 5280 0.633921 CTTCCCCTCCCTCTCTCTCA 59.366 60.000 0.00 0.00 0.00 3.27
4089 5284 2.652113 CCCCTTCCCCTCCCTCTCT 61.652 68.421 0.00 0.00 0.00 3.10
4102 5297 2.010900 GGGAAAGCATCTCCCCCTT 58.989 57.895 6.53 0.00 46.18 3.95
4107 5302 3.914426 TGAGTTAGGGAAAGCATCTCC 57.086 47.619 0.00 0.00 0.00 3.71
4135 5330 1.002544 AGCAGGGCTACAAGTTGAGAC 59.997 52.381 10.54 4.79 36.99 3.36
4141 5336 0.987294 ACATCAGCAGGGCTACAAGT 59.013 50.000 0.00 0.00 36.40 3.16
4144 5339 1.603842 CCACATCAGCAGGGCTACA 59.396 57.895 0.00 0.00 36.40 2.74
4145 5340 1.821332 GCCACATCAGCAGGGCTAC 60.821 63.158 0.00 0.00 43.09 3.58
4146 5341 2.300197 TGCCACATCAGCAGGGCTA 61.300 57.895 0.00 0.00 46.53 3.93
4147 5342 3.654143 TGCCACATCAGCAGGGCT 61.654 61.111 0.00 0.00 46.53 5.19
4148 5343 3.446570 GTGCCACATCAGCAGGGC 61.447 66.667 0.00 0.00 46.58 5.19
4149 5344 2.044555 CAGTGCCACATCAGCAGGG 61.045 63.158 0.00 0.00 41.87 4.45
4150 5345 2.697761 GCAGTGCCACATCAGCAGG 61.698 63.158 2.85 0.00 41.87 4.85
4151 5346 2.875485 GCAGTGCCACATCAGCAG 59.125 61.111 2.85 0.00 41.87 4.24
4162 5357 2.670934 CCTGTGACTGGGCAGTGC 60.671 66.667 6.55 6.55 42.66 4.40
4163 5358 2.033141 CCCTGTGACTGGGCAGTG 59.967 66.667 14.87 0.00 42.66 3.66
4164 5359 2.122413 TCCCTGTGACTGGGCAGT 60.122 61.111 21.46 0.00 45.84 4.40
4165 5360 2.667418 CTCCCTGTGACTGGGCAG 59.333 66.667 21.46 15.31 41.59 4.85
4166 5361 2.930019 CCTCCCTGTGACTGGGCA 60.930 66.667 21.46 10.34 41.59 5.36
4167 5362 3.721706 CCCTCCCTGTGACTGGGC 61.722 72.222 21.46 0.00 41.59 5.36
4168 5363 2.203998 ACCCTCCCTGTGACTGGG 60.204 66.667 20.39 20.39 42.93 4.45
4169 5364 1.536418 TCACCCTCCCTGTGACTGG 60.536 63.158 0.96 0.96 37.80 4.00
4170 5365 0.542938 TCTCACCCTCCCTGTGACTG 60.543 60.000 0.00 0.00 37.80 3.51
4171 5366 0.252012 CTCTCACCCTCCCTGTGACT 60.252 60.000 0.00 0.00 37.80 3.41
4172 5367 0.251832 TCTCTCACCCTCCCTGTGAC 60.252 60.000 0.00 0.00 37.80 3.67
4173 5368 0.040351 CTCTCTCACCCTCCCTGTGA 59.960 60.000 0.00 0.00 40.28 3.58
4174 5369 0.040351 TCTCTCTCACCCTCCCTGTG 59.960 60.000 0.00 0.00 35.01 3.66
4175 5370 0.334676 CTCTCTCTCACCCTCCCTGT 59.665 60.000 0.00 0.00 0.00 4.00
4176 5371 0.396974 CCTCTCTCTCACCCTCCCTG 60.397 65.000 0.00 0.00 0.00 4.45
4177 5372 1.589399 CCCTCTCTCTCACCCTCCCT 61.589 65.000 0.00 0.00 0.00 4.20
4178 5373 1.075600 CCCTCTCTCTCACCCTCCC 60.076 68.421 0.00 0.00 0.00 4.30
4179 5374 0.106217 CTCCCTCTCTCTCACCCTCC 60.106 65.000 0.00 0.00 0.00 4.30
4180 5375 0.106217 CCTCCCTCTCTCTCACCCTC 60.106 65.000 0.00 0.00 0.00 4.30
4181 5376 1.589399 CCCTCCCTCTCTCTCACCCT 61.589 65.000 0.00 0.00 0.00 4.34
4182 5377 1.075600 CCCTCCCTCTCTCTCACCC 60.076 68.421 0.00 0.00 0.00 4.61
4183 5378 1.075600 CCCCTCCCTCTCTCTCACC 60.076 68.421 0.00 0.00 0.00 4.02
4184 5379 1.075600 CCCCCTCCCTCTCTCTCAC 60.076 68.421 0.00 0.00 0.00 3.51
4185 5380 1.230650 TCCCCCTCCCTCTCTCTCA 60.231 63.158 0.00 0.00 0.00 3.27
4186 5381 1.541672 CTCCCCCTCCCTCTCTCTC 59.458 68.421 0.00 0.00 0.00 3.20
4187 5382 2.018086 CCTCCCCCTCCCTCTCTCT 61.018 68.421 0.00 0.00 0.00 3.10
4188 5383 2.612251 CCTCCCCCTCCCTCTCTC 59.388 72.222 0.00 0.00 0.00 3.20
4189 5384 3.039526 CCCTCCCCCTCCCTCTCT 61.040 72.222 0.00 0.00 0.00 3.10
4190 5385 4.179599 CCCCTCCCCCTCCCTCTC 62.180 77.778 0.00 0.00 0.00 3.20
4201 5396 3.462501 ATCTCCCCCTCCCCCTCC 61.463 72.222 0.00 0.00 0.00 4.30
4202 5397 2.122189 CATCTCCCCCTCCCCCTC 60.122 72.222 0.00 0.00 0.00 4.30
4203 5398 4.523282 GCATCTCCCCCTCCCCCT 62.523 72.222 0.00 0.00 0.00 4.79
4204 5399 4.523282 AGCATCTCCCCCTCCCCC 62.523 72.222 0.00 0.00 0.00 5.40
4205 5400 2.000825 GAAAGCATCTCCCCCTCCCC 62.001 65.000 0.00 0.00 0.00 4.81
4206 5401 1.534203 GAAAGCATCTCCCCCTCCC 59.466 63.158 0.00 0.00 0.00 4.30
4207 5402 1.534203 GGAAAGCATCTCCCCCTCC 59.466 63.158 0.00 0.00 0.00 4.30
4208 5403 1.534203 GGGAAAGCATCTCCCCCTC 59.466 63.158 6.53 0.00 46.18 4.30
4209 5404 3.761182 GGGAAAGCATCTCCCCCT 58.239 61.111 6.53 0.00 46.18 4.79
4213 5408 3.914426 TGAGTTAGGGAAAGCATCTCC 57.086 47.619 0.00 0.00 0.00 3.71
4214 5409 3.619038 CGTTGAGTTAGGGAAAGCATCTC 59.381 47.826 0.00 0.00 0.00 2.75
4215 5410 3.260884 TCGTTGAGTTAGGGAAAGCATCT 59.739 43.478 0.00 0.00 0.00 2.90
4216 5411 3.371285 GTCGTTGAGTTAGGGAAAGCATC 59.629 47.826 0.00 0.00 0.00 3.91
4217 5412 3.008049 AGTCGTTGAGTTAGGGAAAGCAT 59.992 43.478 0.00 0.00 0.00 3.79
4218 5413 2.367567 AGTCGTTGAGTTAGGGAAAGCA 59.632 45.455 0.00 0.00 0.00 3.91
4219 5414 3.041508 AGTCGTTGAGTTAGGGAAAGC 57.958 47.619 0.00 0.00 0.00 3.51
4220 5415 4.377897 ACAAGTCGTTGAGTTAGGGAAAG 58.622 43.478 0.00 0.00 37.10 2.62
4221 5416 4.100498 AGACAAGTCGTTGAGTTAGGGAAA 59.900 41.667 0.00 0.00 37.10 3.13
4222 5417 3.640029 AGACAAGTCGTTGAGTTAGGGAA 59.360 43.478 0.00 0.00 37.10 3.97
4223 5418 3.228453 AGACAAGTCGTTGAGTTAGGGA 58.772 45.455 0.00 0.00 37.10 4.20
4224 5419 3.005472 TGAGACAAGTCGTTGAGTTAGGG 59.995 47.826 0.00 0.00 37.10 3.53
4225 5420 4.238761 TGAGACAAGTCGTTGAGTTAGG 57.761 45.455 0.00 0.00 37.10 2.69
4226 5421 5.282510 AGTTGAGACAAGTCGTTGAGTTAG 58.717 41.667 0.00 0.00 37.10 2.34
4227 5422 5.258456 AGTTGAGACAAGTCGTTGAGTTA 57.742 39.130 0.00 0.00 37.10 2.24
4228 5423 4.124851 AGTTGAGACAAGTCGTTGAGTT 57.875 40.909 0.00 0.00 37.10 3.01
4229 5424 3.802948 AGTTGAGACAAGTCGTTGAGT 57.197 42.857 0.00 0.00 37.10 3.41
4230 5425 3.865745 ACAAGTTGAGACAAGTCGTTGAG 59.134 43.478 10.54 0.00 37.10 3.02
4231 5426 3.857052 ACAAGTTGAGACAAGTCGTTGA 58.143 40.909 10.54 0.00 37.10 3.18
4232 5427 4.318121 GCTACAAGTTGAGACAAGTCGTTG 60.318 45.833 10.54 0.00 39.82 4.10
4233 5428 3.802685 GCTACAAGTTGAGACAAGTCGTT 59.197 43.478 10.54 0.00 34.09 3.85
4234 5429 3.381949 GCTACAAGTTGAGACAAGTCGT 58.618 45.455 10.54 0.00 34.09 4.34
4235 5430 2.731976 GGCTACAAGTTGAGACAAGTCG 59.268 50.000 10.54 0.00 34.09 4.18
4236 5431 3.067833 GGGCTACAAGTTGAGACAAGTC 58.932 50.000 10.54 0.49 0.00 3.01
4237 5432 2.706190 AGGGCTACAAGTTGAGACAAGT 59.294 45.455 10.54 0.00 0.00 3.16
4238 5433 3.070018 CAGGGCTACAAGTTGAGACAAG 58.930 50.000 10.54 0.31 0.00 3.16
4239 5434 2.810400 GCAGGGCTACAAGTTGAGACAA 60.810 50.000 10.54 0.00 0.00 3.18
4240 5435 1.270839 GCAGGGCTACAAGTTGAGACA 60.271 52.381 10.54 0.00 0.00 3.41
4241 5436 1.002544 AGCAGGGCTACAAGTTGAGAC 59.997 52.381 10.54 4.79 36.99 3.36
4242 5437 1.002430 CAGCAGGGCTACAAGTTGAGA 59.998 52.381 10.54 0.00 36.40 3.27
4243 5438 1.002430 TCAGCAGGGCTACAAGTTGAG 59.998 52.381 10.54 4.03 36.40 3.02
4244 5439 1.055849 TCAGCAGGGCTACAAGTTGA 58.944 50.000 10.54 0.00 36.40 3.18
4245 5440 1.160137 GTCAGCAGGGCTACAAGTTG 58.840 55.000 0.00 0.00 36.40 3.16
4246 5441 0.320771 CGTCAGCAGGGCTACAAGTT 60.321 55.000 0.00 0.00 36.40 2.66
4247 5442 1.293498 CGTCAGCAGGGCTACAAGT 59.707 57.895 0.00 0.00 36.40 3.16
4248 5443 1.016130 CACGTCAGCAGGGCTACAAG 61.016 60.000 0.00 0.00 36.40 3.16
4249 5444 1.005037 CACGTCAGCAGGGCTACAA 60.005 57.895 0.00 0.00 36.40 2.41
4250 5445 2.656646 CACGTCAGCAGGGCTACA 59.343 61.111 0.00 0.00 36.40 2.74
4251 5446 2.125512 CCACGTCAGCAGGGCTAC 60.126 66.667 0.00 0.00 36.40 3.58
4252 5447 4.082523 GCCACGTCAGCAGGGCTA 62.083 66.667 5.15 0.00 43.09 3.93
4255 5450 4.320456 AGTGCCACGTCAGCAGGG 62.320 66.667 9.95 0.00 41.87 4.45
4256 5451 3.046087 CAGTGCCACGTCAGCAGG 61.046 66.667 9.95 0.00 41.87 4.85
4257 5452 3.720193 GCAGTGCCACGTCAGCAG 61.720 66.667 9.95 1.59 41.87 4.24
4282 5477 3.041940 CGTTGACCGGTGACTGCC 61.042 66.667 14.63 0.00 0.00 4.85
4283 5478 3.712881 GCGTTGACCGGTGACTGC 61.713 66.667 14.63 14.24 36.94 4.40
4290 5485 0.316689 GTTTTGACAGCGTTGACCGG 60.317 55.000 6.16 0.00 36.94 5.28
4291 5486 0.316689 GGTTTTGACAGCGTTGACCG 60.317 55.000 6.16 0.00 40.40 4.79
4301 5496 1.879380 CCAGATGAAGCGGTTTTGACA 59.121 47.619 0.00 0.00 0.00 3.58
4323 5518 1.597027 AACCCTGCACTCGGTTTCG 60.597 57.895 2.86 0.00 39.36 3.46
4324 5519 0.534203 TCAACCCTGCACTCGGTTTC 60.534 55.000 5.54 0.00 40.44 2.78
4328 5523 0.804989 GAAATCAACCCTGCACTCGG 59.195 55.000 0.00 0.00 0.00 4.63
4377 5573 3.005367 CCCTAAACTGCAAAACCAATCGT 59.995 43.478 0.00 0.00 0.00 3.73
4436 5636 3.056891 GTCCAGTGAAGAGAGAAGTCCAG 60.057 52.174 0.00 0.00 0.00 3.86
4451 5651 5.995282 TGACTAACCAAGTAATTGTCCAGTG 59.005 40.000 1.80 0.00 39.07 3.66
4458 5658 7.985184 TGCCTATACTGACTAACCAAGTAATTG 59.015 37.037 0.00 0.00 39.07 2.32
4478 5678 5.162925 ACCTCTAGACTATGAACCTGCCTAT 60.163 44.000 0.00 0.00 0.00 2.57
4536 5736 1.035139 GGAGCATAGCCAATTGTGGG 58.965 55.000 4.43 0.00 46.09 4.61
4558 5758 2.121385 AGGTCTCTCAGGCCAGCA 59.879 61.111 5.01 0.00 44.17 4.41
4571 5771 0.398318 AACTTCAGGCCACTCAGGTC 59.602 55.000 5.01 0.00 44.66 3.85
4572 5772 0.846693 AAACTTCAGGCCACTCAGGT 59.153 50.000 5.01 0.00 40.61 4.00
4573 5773 1.202806 TGAAACTTCAGGCCACTCAGG 60.203 52.381 5.01 0.00 34.85 3.86
4574 5774 2.260844 TGAAACTTCAGGCCACTCAG 57.739 50.000 5.01 0.00 32.50 3.35
4575 5775 2.507484 CATGAAACTTCAGGCCACTCA 58.493 47.619 5.01 0.00 41.08 3.41
4577 5777 1.548582 CCCATGAAACTTCAGGCCACT 60.549 52.381 5.01 0.00 41.08 4.00
4581 5781 0.244721 GCACCCATGAAACTTCAGGC 59.755 55.000 0.00 0.00 41.08 4.85
4585 5785 3.256631 ACAGAATGCACCCATGAAACTTC 59.743 43.478 0.00 0.00 42.53 3.01
4586 5786 3.233507 ACAGAATGCACCCATGAAACTT 58.766 40.909 0.00 0.00 42.53 2.66
4587 5787 2.880443 ACAGAATGCACCCATGAAACT 58.120 42.857 0.00 0.00 42.53 2.66
4588 5788 3.243839 ACAACAGAATGCACCCATGAAAC 60.244 43.478 0.00 0.00 42.53 2.78
4589 5789 2.964464 ACAACAGAATGCACCCATGAAA 59.036 40.909 0.00 0.00 42.53 2.69
4590 5790 2.596346 ACAACAGAATGCACCCATGAA 58.404 42.857 0.00 0.00 42.53 2.57
4591 5791 2.291209 ACAACAGAATGCACCCATGA 57.709 45.000 0.00 0.00 42.53 3.07
4592 5792 3.061322 CAAACAACAGAATGCACCCATG 58.939 45.455 0.00 0.00 42.53 3.66
4593 5793 2.037511 CCAAACAACAGAATGCACCCAT 59.962 45.455 0.00 0.00 42.53 4.00
4594 5794 1.411977 CCAAACAACAGAATGCACCCA 59.588 47.619 0.00 0.00 42.53 4.51
4595 5795 1.412343 ACCAAACAACAGAATGCACCC 59.588 47.619 0.00 0.00 42.53 4.61
4596 5796 2.888834 ACCAAACAACAGAATGCACC 57.111 45.000 0.00 0.00 42.53 5.01
4597 5797 4.202010 ACAGTACCAAACAACAGAATGCAC 60.202 41.667 0.00 0.00 42.53 4.57
4598 5798 3.951037 ACAGTACCAAACAACAGAATGCA 59.049 39.130 0.00 0.00 42.53 3.96
4599 5799 4.036262 TGACAGTACCAAACAACAGAATGC 59.964 41.667 0.00 0.00 42.53 3.56
4600 5800 5.749596 TGACAGTACCAAACAACAGAATG 57.250 39.130 0.00 0.00 46.00 2.67
4601 5801 6.545666 TGAATGACAGTACCAAACAACAGAAT 59.454 34.615 0.00 0.00 0.00 2.40
4661 5861 5.999600 TCATGAATGACCATCATAGCGAAAT 59.000 36.000 0.00 0.00 35.76 2.17
4684 5884 1.202486 TCCAGGTCTGTTGTGTTCGTC 60.202 52.381 0.00 0.00 0.00 4.20
4685 5885 0.828022 TCCAGGTCTGTTGTGTTCGT 59.172 50.000 0.00 0.00 0.00 3.85
4686 5886 1.948104 TTCCAGGTCTGTTGTGTTCG 58.052 50.000 0.00 0.00 0.00 3.95
4713 5990 0.321298 AGACCACCGTCCCAAAATCG 60.321 55.000 0.00 0.00 40.12 3.34
4719 5997 0.036164 CATTCAAGACCACCGTCCCA 59.964 55.000 0.00 0.00 40.12 4.37
4721 5999 1.270625 TGACATTCAAGACCACCGTCC 60.271 52.381 0.00 0.00 40.12 4.79
4725 6003 2.568623 ACCTGACATTCAAGACCACC 57.431 50.000 0.00 0.00 0.00 4.61
4752 6030 0.320858 TAGTGGAATGCAACCGCGAA 60.321 50.000 8.23 9.71 42.97 4.70
4757 6035 9.435688 AAAGAAAATTATTAGTGGAATGCAACC 57.564 29.630 6.38 6.38 0.00 3.77
4774 6052 6.347696 TGCAAACACAGATGGAAAGAAAATT 58.652 32.000 0.00 0.00 0.00 1.82
4780 6058 3.996150 ACTGCAAACACAGATGGAAAG 57.004 42.857 0.00 0.00 40.25 2.62
4781 6059 5.181811 CAGATACTGCAAACACAGATGGAAA 59.818 40.000 0.00 0.00 40.25 3.13
4784 6062 4.611310 CAGATACTGCAAACACAGATGG 57.389 45.455 0.00 0.00 40.25 3.51
4838 6117 0.174845 CGAATGCCTCGGTCCAGTAA 59.825 55.000 0.00 0.00 44.20 2.24
4900 6179 7.307219 GCTTTCCTGTACATGATATACGGTTTC 60.307 40.741 0.00 0.00 0.00 2.78
4905 6184 6.363626 GTCAGCTTTCCTGTACATGATATACG 59.636 42.308 0.00 0.00 42.38 3.06
4923 6202 4.579869 ACGTTCATCCAAATAGTCAGCTT 58.420 39.130 0.00 0.00 0.00 3.74
4929 6208 6.811253 TTTGCTAACGTTCATCCAAATAGT 57.189 33.333 2.82 0.00 0.00 2.12
4944 6223 4.102649 GCACAAACGGGATATTTGCTAAC 58.897 43.478 0.00 0.00 40.10 2.34
4950 6229 2.099405 CCCAGCACAAACGGGATATTT 58.901 47.619 0.00 0.00 43.21 1.40
5011 6290 2.110967 CAGGGCGCTTCTCACCATG 61.111 63.158 7.64 0.00 0.00 3.66
5030 6309 0.388520 TCGTCGCCATTCACACTCAG 60.389 55.000 0.00 0.00 0.00 3.35
5252 6537 4.632153 TGAGAAGACAAGCTAGACAAACC 58.368 43.478 0.00 0.00 0.00 3.27
5289 6574 1.928567 GGGTCATGGTTGGGAGGGA 60.929 63.158 0.00 0.00 0.00 4.20
5294 6579 0.405585 AGTTCAGGGTCATGGTTGGG 59.594 55.000 0.00 0.00 0.00 4.12
5295 6580 2.305927 ACTAGTTCAGGGTCATGGTTGG 59.694 50.000 0.00 0.00 0.00 3.77
5348 6633 1.078759 GTCCGGAAGCACATCAGACG 61.079 60.000 5.23 0.00 0.00 4.18
5411 6724 4.660938 AGGCTTTCCCGGGCACAC 62.661 66.667 18.49 5.09 39.21 3.82
5419 6732 0.890996 CCAGACACACAGGCTTTCCC 60.891 60.000 0.00 0.00 27.44 3.97
5436 6749 3.953612 AGAAACTCAAAGCACAATCACCA 59.046 39.130 0.00 0.00 0.00 4.17
5449 6762 1.202359 GCGCCAAACCAAGAAACTCAA 60.202 47.619 0.00 0.00 0.00 3.02
5501 6822 3.653344 TGATCGTCTGAGTGGTTTTCAG 58.347 45.455 0.00 0.00 42.68 3.02
5502 6823 3.744238 TGATCGTCTGAGTGGTTTTCA 57.256 42.857 0.00 0.00 0.00 2.69
5503 6824 4.245660 TCATGATCGTCTGAGTGGTTTTC 58.754 43.478 0.00 0.00 0.00 2.29
5506 6827 3.516981 CTCATGATCGTCTGAGTGGTT 57.483 47.619 0.00 0.00 35.28 3.67
5511 6832 2.573941 TGCACTCATGATCGTCTGAG 57.426 50.000 14.72 14.72 43.62 3.35
5512 6833 2.428171 TGATGCACTCATGATCGTCTGA 59.572 45.455 0.00 0.00 31.96 3.27
5513 6834 2.538861 GTGATGCACTCATGATCGTCTG 59.461 50.000 0.00 0.00 35.97 3.51
5515 6836 1.520174 CGTGATGCACTCATGATCGTC 59.480 52.381 10.92 0.70 42.57 4.20
5516 6837 1.134995 ACGTGATGCACTCATGATCGT 60.135 47.619 18.99 12.72 42.57 3.73
5521 6842 0.372679 GCAGACGTGATGCACTCATG 59.627 55.000 15.55 13.49 44.99 3.07
5541 6862 2.596851 AAGGTCAGCACTCCGGCAT 61.597 57.895 0.00 0.00 35.83 4.40
5551 6872 2.024414 ACAGAAACAACCAAGGTCAGC 58.976 47.619 0.00 0.00 0.00 4.26
5556 6877 2.358898 CAGGACACAGAAACAACCAAGG 59.641 50.000 0.00 0.00 0.00 3.61
5576 6915 1.070821 CTCGAAAGCGCAATCTCACA 58.929 50.000 11.47 0.00 37.46 3.58
5597 6936 1.042229 ACAAGCTGCATGGCAAAGAA 58.958 45.000 9.85 0.00 38.41 2.52
5603 6942 1.214589 CAGGAACAAGCTGCATGGC 59.785 57.895 9.85 0.99 0.00 4.40
5624 6966 0.323957 TCAGTCAGCAGAGCAGCAAT 59.676 50.000 0.00 0.00 36.85 3.56
5655 6997 1.674611 CGACGCGACCATTCTGTCAC 61.675 60.000 15.93 0.00 34.88 3.67
5683 7025 3.356639 GACACTGATGCTCCGGCGA 62.357 63.158 9.30 0.00 42.25 5.54
5726 7068 0.744874 GTGTAGGATGCGGTGCTCTA 59.255 55.000 0.00 0.00 0.00 2.43
5750 7092 1.155889 TTGTGTATTCGGCTGCACTG 58.844 50.000 0.50 0.00 33.48 3.66
5763 7105 4.019411 TGAATCTGCTCCCATCTTTGTGTA 60.019 41.667 0.00 0.00 0.00 2.90
5818 7161 5.972973 GCAAATTGCGATGTCTTAATCATCA 59.027 36.000 0.90 3.34 40.92 3.07
5834 7177 9.858247 CATCATTTTAGTATCATTGCAAATTGC 57.142 29.630 11.58 11.58 45.29 3.56
5835 7178 9.858247 GCATCATTTTAGTATCATTGCAAATTG 57.142 29.630 1.71 0.00 0.00 2.32
5836 7179 9.048446 GGCATCATTTTAGTATCATTGCAAATT 57.952 29.630 1.71 0.00 0.00 1.82
5837 7180 8.426489 AGGCATCATTTTAGTATCATTGCAAAT 58.574 29.630 1.71 0.00 0.00 2.32
5838 7181 7.784037 AGGCATCATTTTAGTATCATTGCAAA 58.216 30.769 1.71 0.00 0.00 3.68
5839 7182 7.350744 AGGCATCATTTTAGTATCATTGCAA 57.649 32.000 0.00 0.00 0.00 4.08
5943 7471 5.492895 TCCCTGTTATTATCGCAGACAAAA 58.507 37.500 0.00 0.00 42.51 2.44
5970 7498 0.593008 CACGATGGATTTGCATGCGG 60.593 55.000 14.09 0.00 0.00 5.69
5971 7499 0.099259 ACACGATGGATTTGCATGCG 59.901 50.000 14.09 0.00 0.00 4.73
6014 7548 1.604278 GTCACCAGTTTTGACCAGAGC 59.396 52.381 0.00 0.00 37.93 4.09
6026 7560 1.153823 GTATGCGCTCGTCACCAGT 60.154 57.895 9.73 0.00 0.00 4.00
6045 7579 1.737793 CGTAGAACCCCTTCAATGCAC 59.262 52.381 0.00 0.00 0.00 4.57
6046 7580 1.349688 ACGTAGAACCCCTTCAATGCA 59.650 47.619 0.00 0.00 0.00 3.96
6047 7581 2.109425 ACGTAGAACCCCTTCAATGC 57.891 50.000 0.00 0.00 0.00 3.56
6048 7582 4.430908 GAGTACGTAGAACCCCTTCAATG 58.569 47.826 0.00 0.00 0.00 2.82
6049 7583 3.450096 GGAGTACGTAGAACCCCTTCAAT 59.550 47.826 0.00 0.00 0.00 2.57
6050 7584 2.827921 GGAGTACGTAGAACCCCTTCAA 59.172 50.000 0.00 0.00 0.00 2.69
6051 7585 2.042162 AGGAGTACGTAGAACCCCTTCA 59.958 50.000 0.00 0.00 0.00 3.02
6052 7586 2.426381 CAGGAGTACGTAGAACCCCTTC 59.574 54.545 0.00 0.00 0.00 3.46
6053 7587 2.454538 CAGGAGTACGTAGAACCCCTT 58.545 52.381 0.00 0.00 0.00 3.95
6054 7588 1.959028 GCAGGAGTACGTAGAACCCCT 60.959 57.143 0.00 0.00 0.00 4.79
6055 7589 0.459078 GCAGGAGTACGTAGAACCCC 59.541 60.000 0.00 0.00 0.00 4.95
6056 7590 0.459078 GGCAGGAGTACGTAGAACCC 59.541 60.000 0.00 0.00 0.00 4.11
6057 7591 0.100146 CGGCAGGAGTACGTAGAACC 59.900 60.000 0.00 0.00 0.00 3.62
6058 7592 0.525029 GCGGCAGGAGTACGTAGAAC 60.525 60.000 0.00 0.00 0.00 3.01
6059 7593 1.660560 GGCGGCAGGAGTACGTAGAA 61.661 60.000 3.07 0.00 0.00 2.10
6060 7594 2.117156 GGCGGCAGGAGTACGTAGA 61.117 63.158 3.07 0.00 0.00 2.59
6061 7595 1.940883 TTGGCGGCAGGAGTACGTAG 61.941 60.000 12.87 0.00 0.00 3.51
6062 7596 1.940883 CTTGGCGGCAGGAGTACGTA 61.941 60.000 16.59 0.00 0.00 3.57
6063 7597 3.296709 CTTGGCGGCAGGAGTACGT 62.297 63.158 16.59 0.00 0.00 3.57
6064 7598 2.501223 TTCTTGGCGGCAGGAGTACG 62.501 60.000 22.56 2.68 0.00 3.67
6065 7599 1.295423 TTCTTGGCGGCAGGAGTAC 59.705 57.895 22.56 0.00 0.00 2.73
6066 7600 3.800188 TTCTTGGCGGCAGGAGTA 58.200 55.556 22.56 7.63 0.00 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.