Multiple sequence alignment - TraesCS3D01G430400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G430400 chr3D 100.000 3889 0 0 1 3889 544770599 544774487 0.000000e+00 7182.0
1 TraesCS3D01G430400 chr3D 91.262 927 54 13 997 1921 544444795 544445696 0.000000e+00 1238.0
2 TraesCS3D01G430400 chr3D 82.169 830 96 35 2292 3078 544446053 544446873 0.000000e+00 665.0
3 TraesCS3D01G430400 chr3D 89.831 295 28 2 2573 2866 544791178 544791471 1.020000e-100 377.0
4 TraesCS3D01G430400 chr3D 84.688 320 35 5 1960 2279 544786187 544786492 1.360000e-79 307.0
5 TraesCS3D01G430400 chr3D 85.663 279 35 4 2286 2564 544786538 544786811 4.920000e-74 289.0
6 TraesCS3D01G430400 chr3D 76.098 569 97 18 2956 3512 544795883 544796424 1.070000e-65 261.0
7 TraesCS3D01G430400 chr3D 84.571 175 24 3 4 176 289104647 289104474 1.860000e-38 171.0
8 TraesCS3D01G430400 chr3D 100.000 29 0 0 2311 2339 544772517 544772545 2.000000e-03 54.7
9 TraesCS3D01G430400 chr3D 100.000 29 0 0 1919 1947 544772909 544772937 2.000000e-03 54.7
10 TraesCS3D01G430400 chr3A 94.553 1175 47 7 749 1921 681446739 681447898 0.000000e+00 1799.0
11 TraesCS3D01G430400 chr3A 89.483 1084 66 10 864 1921 681398961 681400022 0.000000e+00 1327.0
12 TraesCS3D01G430400 chr3A 81.754 992 117 39 2292 3228 681400396 681401378 0.000000e+00 771.0
13 TraesCS3D01G430400 chr3A 81.818 847 101 34 2292 3100 681448365 681449196 0.000000e+00 662.0
14 TraesCS3D01G430400 chr3A 94.778 383 17 1 44 426 681445454 681445833 9.300000e-166 593.0
15 TraesCS3D01G430400 chr3A 94.737 209 8 3 420 625 681446532 681446740 4.850000e-84 322.0
16 TraesCS3D01G430400 chr3A 80.347 346 32 17 1960 2285 681447898 681448227 3.020000e-56 230.0
17 TraesCS3D01G430400 chr3A 88.591 149 14 3 3285 3433 681401569 681401714 1.110000e-40 178.0
18 TraesCS3D01G430400 chr3B 89.368 950 53 13 801 1711 720265508 720266448 0.000000e+00 1151.0
19 TraesCS3D01G430400 chr3B 81.887 922 111 35 2283 3159 720266940 720267850 0.000000e+00 726.0
20 TraesCS3D01G430400 chr3B 84.579 214 23 6 3212 3417 720267849 720268060 1.830000e-48 204.0
21 TraesCS3D01G430400 chr3B 87.826 115 12 2 3560 3673 720268188 720268301 2.440000e-27 134.0
22 TraesCS3D01G430400 chr3B 94.915 59 2 1 1861 1918 720975637 720975695 1.490000e-14 91.6
23 TraesCS3D01G430400 chr3B 83.529 85 8 5 1838 1921 720266513 720266592 1.500000e-09 75.0
24 TraesCS3D01G430400 chr2B 79.804 510 75 22 1 490 398710179 398710680 2.880000e-91 346.0
25 TraesCS3D01G430400 chr2B 94.074 135 8 0 624 758 231667541 231667407 5.090000e-49 206.0
26 TraesCS3D01G430400 chr2B 84.783 92 10 2 3242 3329 548622336 548622427 5.350000e-14 89.8
27 TraesCS3D01G430400 chr6A 80.625 480 64 15 12 470 521860474 521860003 1.030000e-90 344.0
28 TraesCS3D01G430400 chr6A 78.834 463 65 16 17 463 119785406 119784961 8.230000e-72 281.0
29 TraesCS3D01G430400 chr1B 78.837 430 69 12 72 485 667430490 667430067 1.780000e-68 270.0
30 TraesCS3D01G430400 chr2A 77.576 495 71 24 1 462 437674929 437675416 2.980000e-66 263.0
31 TraesCS3D01G430400 chr2A 92.754 138 9 1 613 750 321155669 321155533 8.520000e-47 198.0
32 TraesCS3D01G430400 chr1A 93.382 136 9 0 624 759 538050305 538050440 6.590000e-48 202.0
33 TraesCS3D01G430400 chr1A 87.857 140 16 1 36 174 575588865 575588726 3.110000e-36 163.0
34 TraesCS3D01G430400 chr1A 90.909 66 6 0 3257 3322 8336542 8336607 5.350000e-14 89.8
35 TraesCS3D01G430400 chr5B 93.985 133 7 1 621 752 56559874 56559742 2.370000e-47 200.0
36 TraesCS3D01G430400 chrUn 93.284 134 9 0 624 757 211981016 211980883 8.520000e-47 198.0
37 TraesCS3D01G430400 chrUn 93.284 134 9 0 624 757 313296286 313296419 8.520000e-47 198.0
38 TraesCS3D01G430400 chr6D 93.284 134 9 0 624 757 296563612 296563479 8.520000e-47 198.0
39 TraesCS3D01G430400 chr7B 92.086 139 11 0 617 755 723178516 723178378 3.070000e-46 196.0
40 TraesCS3D01G430400 chr7B 92.086 139 11 0 617 755 723351991 723351853 3.070000e-46 196.0
41 TraesCS3D01G430400 chr7D 82.166 157 24 4 19 172 586743676 586743521 8.770000e-27 132.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G430400 chr3D 544770599 544774487 3888 False 2430.466667 7182 100.000000 1 3889 3 chr3D.!!$F4 3888
1 TraesCS3D01G430400 chr3D 544444795 544446873 2078 False 951.500000 1238 86.715500 997 3078 2 chr3D.!!$F3 2081
2 TraesCS3D01G430400 chr3D 544786187 544786811 624 False 298.000000 307 85.175500 1960 2564 2 chr3D.!!$F5 604
3 TraesCS3D01G430400 chr3D 544795883 544796424 541 False 261.000000 261 76.098000 2956 3512 1 chr3D.!!$F2 556
4 TraesCS3D01G430400 chr3A 681398961 681401714 2753 False 758.666667 1327 86.609333 864 3433 3 chr3A.!!$F1 2569
5 TraesCS3D01G430400 chr3A 681445454 681449196 3742 False 721.200000 1799 89.246600 44 3100 5 chr3A.!!$F2 3056
6 TraesCS3D01G430400 chr3B 720265508 720268301 2793 False 458.000000 1151 85.437800 801 3673 5 chr3B.!!$F2 2872
7 TraesCS3D01G430400 chr2B 398710179 398710680 501 False 346.000000 346 79.804000 1 490 1 chr2B.!!$F1 489

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
27 28 0.040157 CAACATGTGTGGTGCCTTCG 60.040 55.0 0.00 0.0 36.02 3.79 F
1674 2469 0.107897 ATGCCGGTGTTGCGAAGATA 60.108 50.0 1.90 0.0 0.00 1.98 F
2636 3647 0.602562 TGCATGCCACCTTTTGCTAC 59.397 50.0 16.68 0.0 36.10 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1723 2518 0.173708 GAGTACAGAACAGAGGCGGG 59.826 60.0 0.0 0.0 0.0 6.13 R
2792 3823 0.319555 TTCCTGAGTTCCAAGTCGCG 60.320 55.0 0.0 0.0 0.0 5.87 R
3683 4972 0.036022 GCTCTGTCTTGGGAAGTGCT 59.964 55.0 0.0 0.0 0.0 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 3.871775 CAACATGTGTGGTGCCTTC 57.128 52.632 0.00 0.00 36.02 3.46
27 28 0.040157 CAACATGTGTGGTGCCTTCG 60.040 55.000 0.00 0.00 36.02 3.79
28 29 1.172180 AACATGTGTGGTGCCTTCGG 61.172 55.000 0.00 0.00 0.00 4.30
29 30 1.600636 CATGTGTGGTGCCTTCGGT 60.601 57.895 0.00 0.00 0.00 4.69
30 31 1.600636 ATGTGTGGTGCCTTCGGTG 60.601 57.895 0.00 0.00 0.00 4.94
31 32 2.978010 GTGTGGTGCCTTCGGTGG 60.978 66.667 0.00 0.00 0.00 4.61
51 52 2.137523 GCAACATTGAAGGTGCCTTTG 58.862 47.619 4.83 2.61 36.26 2.77
104 126 0.252696 TGAGTGGCATAGGAGGTGGT 60.253 55.000 0.00 0.00 0.00 4.16
183 206 1.255667 GGTGCTTCCGGTAGAGGTGA 61.256 60.000 12.94 0.00 0.00 4.02
390 428 9.884465 GCATTATGACTATCTTTGGTATGAAAC 57.116 33.333 0.00 0.00 0.00 2.78
400 438 7.496529 TCTTTGGTATGAAACTTGAGTTCAG 57.503 36.000 0.00 0.00 37.25 3.02
479 1223 0.741574 TGCGGCTATACAACGGTTGG 60.742 55.000 23.51 7.98 34.12 3.77
482 1226 1.296727 GGCTATACAACGGTTGGAGC 58.703 55.000 24.59 24.59 35.52 4.70
517 1261 2.279582 ATGTACATCGGCTATAGCGC 57.720 50.000 18.30 0.00 43.26 5.92
519 1263 0.167470 GTACATCGGCTATAGCGCGA 59.833 55.000 28.39 28.39 43.68 5.87
632 1379 8.519799 TTTTGATGATGTAAATTACTCCCTCC 57.480 34.615 4.67 0.00 0.00 4.30
633 1380 6.823286 TGATGATGTAAATTACTCCCTCCA 57.177 37.500 4.67 0.00 0.00 3.86
634 1381 7.392766 TGATGATGTAAATTACTCCCTCCAT 57.607 36.000 4.67 0.05 0.00 3.41
635 1382 7.453393 TGATGATGTAAATTACTCCCTCCATC 58.547 38.462 4.67 8.20 0.00 3.51
636 1383 6.187727 TGATGTAAATTACTCCCTCCATCC 57.812 41.667 4.67 0.00 0.00 3.51
637 1384 4.682778 TGTAAATTACTCCCTCCATCCG 57.317 45.455 4.67 0.00 0.00 4.18
638 1385 4.291792 TGTAAATTACTCCCTCCATCCGA 58.708 43.478 4.67 0.00 0.00 4.55
639 1386 4.717778 TGTAAATTACTCCCTCCATCCGAA 59.282 41.667 4.67 0.00 0.00 4.30
640 1387 4.855298 AAATTACTCCCTCCATCCGAAA 57.145 40.909 0.00 0.00 0.00 3.46
641 1388 4.855298 AATTACTCCCTCCATCCGAAAA 57.145 40.909 0.00 0.00 0.00 2.29
642 1389 5.388599 AATTACTCCCTCCATCCGAAAAT 57.611 39.130 0.00 0.00 0.00 1.82
643 1390 6.509523 AATTACTCCCTCCATCCGAAAATA 57.490 37.500 0.00 0.00 0.00 1.40
644 1391 3.840124 ACTCCCTCCATCCGAAAATAC 57.160 47.619 0.00 0.00 0.00 1.89
645 1392 3.385115 ACTCCCTCCATCCGAAAATACT 58.615 45.455 0.00 0.00 0.00 2.12
646 1393 3.780850 ACTCCCTCCATCCGAAAATACTT 59.219 43.478 0.00 0.00 0.00 2.24
647 1394 4.130118 CTCCCTCCATCCGAAAATACTTG 58.870 47.826 0.00 0.00 0.00 3.16
648 1395 3.521937 TCCCTCCATCCGAAAATACTTGT 59.478 43.478 0.00 0.00 0.00 3.16
649 1396 3.877508 CCCTCCATCCGAAAATACTTGTC 59.122 47.826 0.00 0.00 0.00 3.18
650 1397 4.513442 CCTCCATCCGAAAATACTTGTCA 58.487 43.478 0.00 0.00 0.00 3.58
651 1398 5.126067 CCTCCATCCGAAAATACTTGTCAT 58.874 41.667 0.00 0.00 0.00 3.06
652 1399 5.237344 CCTCCATCCGAAAATACTTGTCATC 59.763 44.000 0.00 0.00 0.00 2.92
653 1400 5.739959 TCCATCCGAAAATACTTGTCATCA 58.260 37.500 0.00 0.00 0.00 3.07
654 1401 6.176896 TCCATCCGAAAATACTTGTCATCAA 58.823 36.000 0.00 0.00 0.00 2.57
655 1402 6.657117 TCCATCCGAAAATACTTGTCATCAAA 59.343 34.615 0.00 0.00 32.87 2.69
656 1403 7.175816 TCCATCCGAAAATACTTGTCATCAAAA 59.824 33.333 0.00 0.00 32.87 2.44
657 1404 7.975616 CCATCCGAAAATACTTGTCATCAAAAT 59.024 33.333 0.00 0.00 32.87 1.82
660 1407 9.443323 TCCGAAAATACTTGTCATCAAAATAGA 57.557 29.630 0.00 0.00 32.87 1.98
736 1483 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
737 1484 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
738 1485 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
739 1486 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
740 1487 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
741 1488 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
742 1489 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
743 1490 2.498481 TGACAAGTATTTCCGGACGGAT 59.502 45.455 14.89 3.07 44.74 4.18
744 1491 2.864343 GACAAGTATTTCCGGACGGATG 59.136 50.000 14.89 10.86 44.74 3.51
745 1492 2.210116 CAAGTATTTCCGGACGGATGG 58.790 52.381 14.89 0.00 44.74 3.51
746 1493 1.784358 AGTATTTCCGGACGGATGGA 58.216 50.000 14.89 4.49 44.74 3.41
747 1494 1.687123 AGTATTTCCGGACGGATGGAG 59.313 52.381 14.89 0.00 44.74 3.86
748 1495 1.411612 GTATTTCCGGACGGATGGAGT 59.588 52.381 14.89 0.00 44.74 3.85
749 1496 1.784358 ATTTCCGGACGGATGGAGTA 58.216 50.000 14.89 0.00 44.74 2.59
861 1610 3.856521 CGAGCTGCTTATCTTATCCATCG 59.143 47.826 2.53 0.00 0.00 3.84
902 1665 8.773033 AGGATTAGCTTCATTTTTACCATGAT 57.227 30.769 0.00 0.00 30.63 2.45
903 1666 8.636213 AGGATTAGCTTCATTTTTACCATGATG 58.364 33.333 0.00 0.00 30.63 3.07
904 1667 8.632679 GGATTAGCTTCATTTTTACCATGATGA 58.367 33.333 0.00 0.00 30.63 2.92
906 1669 9.976511 ATTAGCTTCATTTTTACCATGATGATG 57.023 29.630 0.00 0.00 30.63 3.07
917 1680 4.600062 ACCATGATGATGATGATGATGGG 58.400 43.478 13.94 0.00 34.39 4.00
920 1683 5.480422 CCATGATGATGATGATGATGGGTTT 59.520 40.000 2.63 0.00 0.00 3.27
924 1687 6.837048 TGATGATGATGATGATGGGTTTCTTT 59.163 34.615 0.00 0.00 0.00 2.52
1062 1857 4.684134 GGCTTCAAGGCCCTGGCA 62.684 66.667 10.86 0.00 45.92 4.92
1463 2258 1.598183 CGACATACGCTACTGCTCCAG 60.598 57.143 0.00 0.00 36.97 3.86
1641 2436 0.684535 TCAGCAGGGTGTTCGATTCA 59.315 50.000 0.00 0.00 0.00 2.57
1674 2469 0.107897 ATGCCGGTGTTGCGAAGATA 60.108 50.000 1.90 0.00 0.00 1.98
1680 2475 1.398390 GGTGTTGCGAAGATAGCCAAG 59.602 52.381 0.00 0.00 0.00 3.61
1700 2495 5.994668 CCAAGGGTATAATTTCTCTCTGCTC 59.005 44.000 0.00 0.00 0.00 4.26
1703 2498 7.444703 AGGGTATAATTTCTCTCTGCTCTTT 57.555 36.000 0.00 0.00 0.00 2.52
1724 2519 2.869233 TTCTTTTCAGTGCTGTTGCC 57.131 45.000 0.00 0.00 38.71 4.52
1725 2520 1.032014 TCTTTTCAGTGCTGTTGCCC 58.968 50.000 0.00 0.00 38.71 5.36
1752 2547 7.548097 CCTCTGTTCTGTACTCTGCTAAAATA 58.452 38.462 0.00 0.00 0.00 1.40
1754 2549 8.932945 TCTGTTCTGTACTCTGCTAAAATATG 57.067 34.615 0.00 0.00 0.00 1.78
1815 2611 6.256053 AGGGATGTTACTTGGAATTTCACAT 58.744 36.000 0.00 0.00 0.00 3.21
1822 2618 7.390440 TGTTACTTGGAATTTCACATCCTACAG 59.610 37.037 0.00 0.00 36.64 2.74
1921 2740 1.763545 GGGTGTCTCTCTTGGGTATCC 59.236 57.143 0.00 0.00 0.00 2.59
1922 2741 2.467880 GGTGTCTCTCTTGGGTATCCA 58.532 52.381 0.00 0.00 42.25 3.41
1923 2742 3.041946 GGTGTCTCTCTTGGGTATCCAT 58.958 50.000 0.00 0.00 43.63 3.41
1924 2743 3.070302 GGTGTCTCTCTTGGGTATCCATC 59.930 52.174 0.00 0.00 43.63 3.51
1925 2744 3.706594 GTGTCTCTCTTGGGTATCCATCA 59.293 47.826 0.00 0.00 43.63 3.07
1926 2745 3.706594 TGTCTCTCTTGGGTATCCATCAC 59.293 47.826 0.00 0.00 43.63 3.06
1927 2746 3.964031 GTCTCTCTTGGGTATCCATCACT 59.036 47.826 0.00 0.00 43.63 3.41
1928 2747 4.038642 GTCTCTCTTGGGTATCCATCACTC 59.961 50.000 0.00 0.00 43.63 3.51
1929 2748 4.078922 TCTCTCTTGGGTATCCATCACTCT 60.079 45.833 0.00 0.00 43.63 3.24
1930 2749 4.624913 TCTCTTGGGTATCCATCACTCTT 58.375 43.478 0.00 0.00 43.63 2.85
1931 2750 4.651503 TCTCTTGGGTATCCATCACTCTTC 59.348 45.833 0.00 0.00 43.63 2.87
1932 2751 4.361783 TCTTGGGTATCCATCACTCTTCA 58.638 43.478 0.00 0.00 43.63 3.02
1933 2752 4.406972 TCTTGGGTATCCATCACTCTTCAG 59.593 45.833 0.00 0.00 43.63 3.02
1934 2753 3.994317 TGGGTATCCATCACTCTTCAGA 58.006 45.455 0.00 0.00 38.32 3.27
1935 2754 4.560739 TGGGTATCCATCACTCTTCAGAT 58.439 43.478 0.00 0.00 38.32 2.90
1936 2755 4.590647 TGGGTATCCATCACTCTTCAGATC 59.409 45.833 0.00 0.00 38.32 2.75
1937 2756 4.321601 GGGTATCCATCACTCTTCAGATCG 60.322 50.000 0.00 0.00 0.00 3.69
1938 2757 4.321601 GGTATCCATCACTCTTCAGATCGG 60.322 50.000 0.00 0.00 0.00 4.18
1939 2758 2.739943 TCCATCACTCTTCAGATCGGT 58.260 47.619 0.00 0.00 0.00 4.69
1940 2759 3.099905 TCCATCACTCTTCAGATCGGTT 58.900 45.455 0.00 0.00 0.00 4.44
1941 2760 3.118992 TCCATCACTCTTCAGATCGGTTG 60.119 47.826 0.00 0.00 0.00 3.77
1942 2761 2.370281 TCACTCTTCAGATCGGTTGC 57.630 50.000 0.00 0.00 0.00 4.17
1943 2762 1.618343 TCACTCTTCAGATCGGTTGCA 59.382 47.619 0.00 0.00 0.00 4.08
1944 2763 1.998315 CACTCTTCAGATCGGTTGCAG 59.002 52.381 0.00 0.00 0.00 4.41
1945 2764 1.895798 ACTCTTCAGATCGGTTGCAGA 59.104 47.619 0.00 0.00 0.00 4.26
1946 2765 2.094286 ACTCTTCAGATCGGTTGCAGAG 60.094 50.000 8.06 8.06 40.36 3.35
1947 2766 1.895798 TCTTCAGATCGGTTGCAGAGT 59.104 47.619 0.00 0.00 0.00 3.24
1948 2767 2.300152 TCTTCAGATCGGTTGCAGAGTT 59.700 45.455 0.00 0.00 0.00 3.01
1949 2768 2.084610 TCAGATCGGTTGCAGAGTTG 57.915 50.000 0.00 0.00 0.00 3.16
1950 2769 1.618343 TCAGATCGGTTGCAGAGTTGA 59.382 47.619 0.00 0.00 0.00 3.18
1951 2770 1.998315 CAGATCGGTTGCAGAGTTGAG 59.002 52.381 0.00 0.00 0.00 3.02
1952 2771 1.895798 AGATCGGTTGCAGAGTTGAGA 59.104 47.619 0.00 0.00 0.00 3.27
1953 2772 2.300152 AGATCGGTTGCAGAGTTGAGAA 59.700 45.455 0.00 0.00 0.00 2.87
1954 2773 1.865865 TCGGTTGCAGAGTTGAGAAC 58.134 50.000 0.00 0.00 0.00 3.01
1955 2774 1.138069 TCGGTTGCAGAGTTGAGAACA 59.862 47.619 0.00 0.00 0.00 3.18
1956 2775 1.939934 CGGTTGCAGAGTTGAGAACAA 59.060 47.619 0.00 0.00 0.00 2.83
1957 2776 2.354510 CGGTTGCAGAGTTGAGAACAAA 59.645 45.455 0.00 0.00 37.77 2.83
1958 2777 3.546815 CGGTTGCAGAGTTGAGAACAAAG 60.547 47.826 0.00 0.00 37.77 2.77
1959 2778 3.366719 GTTGCAGAGTTGAGAACAAAGC 58.633 45.455 0.00 0.00 37.77 3.51
2035 2854 4.098894 ACTGGAATTGGCAGATCCATTTT 58.901 39.130 19.66 8.16 46.04 1.82
2076 2897 5.999205 TTATGTTAGTAGAACCCGTTGGA 57.001 39.130 0.00 0.00 34.81 3.53
2077 2898 6.549433 TTATGTTAGTAGAACCCGTTGGAT 57.451 37.500 0.00 0.00 34.81 3.41
2078 2899 4.196626 TGTTAGTAGAACCCGTTGGATG 57.803 45.455 0.00 0.00 34.81 3.51
2079 2900 3.579586 TGTTAGTAGAACCCGTTGGATGT 59.420 43.478 0.00 0.00 34.81 3.06
2080 2901 4.040706 TGTTAGTAGAACCCGTTGGATGTT 59.959 41.667 0.00 0.00 34.81 2.71
2081 2902 3.053831 AGTAGAACCCGTTGGATGTTG 57.946 47.619 0.00 0.00 34.81 3.33
2082 2903 2.081462 GTAGAACCCGTTGGATGTTGG 58.919 52.381 0.00 0.00 34.81 3.77
2093 2914 4.378770 CGTTGGATGTTGGTTCTGATTCTG 60.379 45.833 0.00 0.00 0.00 3.02
2094 2915 4.639078 TGGATGTTGGTTCTGATTCTGA 57.361 40.909 0.00 0.00 0.00 3.27
2099 2920 6.865205 GGATGTTGGTTCTGATTCTGAAAAAG 59.135 38.462 7.47 0.00 0.00 2.27
2191 3016 7.973944 AGTGATTTGCCGGTATTTTAGAATTTC 59.026 33.333 1.90 0.00 0.00 2.17
2207 3053 9.736023 TTTAGAATTTCACAAGCTTTCTTTCTC 57.264 29.630 0.00 0.00 0.00 2.87
2236 3082 6.721318 TCCAACTCTACCAGCTTTCATAAAT 58.279 36.000 0.00 0.00 0.00 1.40
2288 3272 3.745975 TGTGAATTTGCTCTAGTGTTCCG 59.254 43.478 0.00 0.00 0.00 4.30
2324 3308 3.192001 GCAGCAAAATCCATCACTCTTCA 59.808 43.478 0.00 0.00 0.00 3.02
2359 3343 1.407989 GCAGGCTGCTCTATTTCCAGT 60.408 52.381 31.37 0.00 40.96 4.00
2411 3397 9.413048 GGATCATATAGTTAGTGCTGTTAGTTC 57.587 37.037 0.00 0.00 0.00 3.01
2416 3402 5.386958 AGTTAGTGCTGTTAGTTCGATGA 57.613 39.130 0.00 0.00 0.00 2.92
2473 3466 4.577834 TTTGAAGGGTTCGAAATTCACC 57.422 40.909 16.80 7.74 31.72 4.02
2503 3496 3.181467 CCCCTCTAATGAGTCAGAAGCAG 60.181 52.174 0.00 0.00 38.61 4.24
2505 3498 3.456280 CTCTAATGAGTCAGAAGCAGGC 58.544 50.000 0.00 0.00 35.67 4.85
2586 3597 3.002038 TCCATGTGCATGCATAAGACA 57.998 42.857 25.64 16.96 37.49 3.41
2599 3610 1.737838 TAAGACATCCCTGCGCAAAG 58.262 50.000 13.05 5.65 0.00 2.77
2612 3623 1.802508 GCGCAAAGCTGTTCCTTGTTT 60.803 47.619 0.30 0.00 44.04 2.83
2620 3631 4.651778 AGCTGTTCCTTGTTTACTATGCA 58.348 39.130 0.00 0.00 0.00 3.96
2622 3633 5.124457 AGCTGTTCCTTGTTTACTATGCATG 59.876 40.000 10.16 1.82 0.00 4.06
2628 3639 3.364460 TGTTTACTATGCATGCCACCT 57.636 42.857 16.68 0.00 0.00 4.00
2629 3640 3.696045 TGTTTACTATGCATGCCACCTT 58.304 40.909 16.68 0.00 0.00 3.50
2630 3641 4.085733 TGTTTACTATGCATGCCACCTTT 58.914 39.130 16.68 0.00 0.00 3.11
2631 3642 4.526262 TGTTTACTATGCATGCCACCTTTT 59.474 37.500 16.68 0.00 0.00 2.27
2632 3643 4.717233 TTACTATGCATGCCACCTTTTG 57.283 40.909 16.68 0.00 0.00 2.44
2633 3644 1.205417 ACTATGCATGCCACCTTTTGC 59.795 47.619 16.68 0.00 35.67 3.68
2634 3645 1.479323 CTATGCATGCCACCTTTTGCT 59.521 47.619 16.68 0.00 36.10 3.91
2635 3646 1.559368 ATGCATGCCACCTTTTGCTA 58.441 45.000 16.68 0.00 36.10 3.49
2636 3647 0.602562 TGCATGCCACCTTTTGCTAC 59.397 50.000 16.68 0.00 36.10 3.58
2637 3648 0.602562 GCATGCCACCTTTTGCTACA 59.397 50.000 6.36 0.00 32.41 2.74
2658 3669 6.655078 ACATTTTTCTCCAGCAACTATGTT 57.345 33.333 0.00 0.00 0.00 2.71
2663 3674 7.817418 TTTTCTCCAGCAACTATGTTAACTT 57.183 32.000 7.22 3.03 0.00 2.66
2666 3677 9.515226 TTTCTCCAGCAACTATGTTAACTTAAT 57.485 29.630 7.22 0.00 0.00 1.40
2673 3684 9.667107 AGCAACTATGTTAACTTAATAAGCTGA 57.333 29.630 7.22 0.00 0.00 4.26
2714 3745 9.730705 ATTGTTTCAGAAATATCAGAGAAGTCA 57.269 29.630 0.00 0.00 0.00 3.41
2720 3751 8.045507 TCAGAAATATCAGAGAAGTCAGCAAAT 58.954 33.333 0.00 0.00 0.00 2.32
2726 3757 3.999001 CAGAGAAGTCAGCAAATGCAGTA 59.001 43.478 8.28 0.00 45.16 2.74
2727 3758 4.634883 CAGAGAAGTCAGCAAATGCAGTAT 59.365 41.667 8.28 0.00 45.16 2.12
2741 3772 1.379527 CAGTATTGGGAACGAAGGCC 58.620 55.000 0.00 0.00 0.00 5.19
2792 3823 2.124403 CAGGGCCTGGAGCATGTC 60.124 66.667 26.34 0.00 46.50 3.06
2807 3838 0.317160 ATGTCGCGACTTGGAACTCA 59.683 50.000 36.27 16.15 0.00 3.41
2832 3863 5.454471 GGAATGCTGAGATCTAATGACCTGT 60.454 44.000 0.00 0.00 0.00 4.00
2930 3961 8.289618 GCGAAAATTTATATGTGAATCCTAGCA 58.710 33.333 0.00 0.00 0.00 3.49
2974 4006 7.889469 ACGGTAGAAAGTAGACAAGAAATACA 58.111 34.615 0.00 0.00 0.00 2.29
2998 4032 6.622833 ATTTCTGCAATTTGGAAAACAAGG 57.377 33.333 2.62 0.00 40.82 3.61
3005 4039 5.125356 CAATTTGGAAAACAAGGGCTCTTT 58.875 37.500 0.00 0.00 40.82 2.52
3023 4057 7.338449 GGGCTCTTTTTGGTTGTATCTTGTATA 59.662 37.037 0.00 0.00 0.00 1.47
3024 4058 8.903820 GGCTCTTTTTGGTTGTATCTTGTATAT 58.096 33.333 0.00 0.00 0.00 0.86
3069 4119 8.371571 AGGATTTTCTGAAATTTCCTTAGCAT 57.628 30.769 20.81 1.28 35.65 3.79
3090 4140 8.701908 AGCATTACTGATGTCCATATTGATTT 57.298 30.769 0.00 0.00 38.07 2.17
3100 4150 8.876275 ATGTCCATATTGATTTGTTGTTATGC 57.124 30.769 0.00 0.00 0.00 3.14
3103 4153 7.436080 GTCCATATTGATTTGTTGTTATGCTGG 59.564 37.037 0.00 0.00 0.00 4.85
3165 4222 2.589014 GCTTTTGCAGAGAATTGACGG 58.411 47.619 3.58 0.00 46.58 4.79
3191 4248 3.052455 ACAATAGGCGTGTGATTGACA 57.948 42.857 7.25 0.00 35.12 3.58
3196 4253 2.283298 AGGCGTGTGATTGACATGATC 58.717 47.619 0.00 0.00 43.44 2.92
3205 4262 3.135348 TGATTGACATGATCTGAGGGACC 59.865 47.826 0.00 0.00 0.00 4.46
3217 4274 0.108756 GAGGGACCGAGGAAAGTTCG 60.109 60.000 0.00 0.00 37.78 3.95
3243 4449 4.278310 AGCTTATATTTGGGTTGGGTGAC 58.722 43.478 0.00 0.00 0.00 3.67
3354 4569 3.632080 CGCACTACCACCACCCCA 61.632 66.667 0.00 0.00 0.00 4.96
3358 4573 1.825641 GCACTACCACCACCCCATTTT 60.826 52.381 0.00 0.00 0.00 1.82
3360 4575 0.894835 CTACCACCACCCCATTTTGC 59.105 55.000 0.00 0.00 0.00 3.68
3436 4652 8.341903 GCCAAATTTAGCTTACAACATTTGTTT 58.658 29.630 0.99 0.00 42.22 2.83
3437 4653 9.862585 CCAAATTTAGCTTACAACATTTGTTTC 57.137 29.630 0.00 0.00 42.22 2.78
3443 4659 9.809096 TTAGCTTACAACATTTGTTTCATTTCA 57.191 25.926 0.00 0.00 42.22 2.69
3447 4663 6.348621 ACAACATTTGTTTCATTTCAGTGC 57.651 33.333 0.00 0.00 42.22 4.40
3462 4679 3.256620 GTGCTCACACTTTGTTGGC 57.743 52.632 0.00 0.00 43.85 4.52
3464 4681 0.682532 TGCTCACACTTTGTTGGCCA 60.683 50.000 0.00 0.00 0.00 5.36
3465 4682 0.675633 GCTCACACTTTGTTGGCCAT 59.324 50.000 6.09 0.00 0.00 4.40
3480 4697 4.582701 TGGCCATTACTCTTTTGTGTTG 57.417 40.909 0.00 0.00 0.00 3.33
3486 4703 7.196331 GCCATTACTCTTTTGTGTTGATATCC 58.804 38.462 0.00 0.00 0.00 2.59
3489 4706 7.972832 TTACTCTTTTGTGTTGATATCCGTT 57.027 32.000 0.00 0.00 0.00 4.44
3490 4707 6.241207 ACTCTTTTGTGTTGATATCCGTTG 57.759 37.500 0.00 0.00 0.00 4.10
3491 4708 5.995282 ACTCTTTTGTGTTGATATCCGTTGA 59.005 36.000 0.00 0.00 0.00 3.18
3492 4709 6.485313 ACTCTTTTGTGTTGATATCCGTTGAA 59.515 34.615 0.00 0.00 0.00 2.69
3493 4710 7.012894 ACTCTTTTGTGTTGATATCCGTTGAAA 59.987 33.333 0.00 0.00 0.00 2.69
3496 4713 7.865875 TTTGTGTTGATATCCGTTGAAATTG 57.134 32.000 0.00 0.00 0.00 2.32
3502 4719 7.063191 TGTTGATATCCGTTGAAATTGCATTTG 59.937 33.333 0.00 0.00 31.47 2.32
3519 4736 9.701098 ATTGCATTTGTAATATATTTGAGCAGG 57.299 29.630 2.68 0.00 0.00 4.85
3532 4749 2.513753 TGAGCAGGTATTTGTGGGTTG 58.486 47.619 0.00 0.00 0.00 3.77
3535 4752 1.967779 GCAGGTATTTGTGGGTTGGTT 59.032 47.619 0.00 0.00 0.00 3.67
3537 4754 3.192633 GCAGGTATTTGTGGGTTGGTTAG 59.807 47.826 0.00 0.00 0.00 2.34
3538 4755 4.403734 CAGGTATTTGTGGGTTGGTTAGT 58.596 43.478 0.00 0.00 0.00 2.24
3539 4756 5.562635 CAGGTATTTGTGGGTTGGTTAGTA 58.437 41.667 0.00 0.00 0.00 1.82
3541 4758 6.661805 CAGGTATTTGTGGGTTGGTTAGTAAT 59.338 38.462 0.00 0.00 0.00 1.89
3542 4759 7.830201 CAGGTATTTGTGGGTTGGTTAGTAATA 59.170 37.037 0.00 0.00 0.00 0.98
3543 4760 8.050930 AGGTATTTGTGGGTTGGTTAGTAATAG 58.949 37.037 0.00 0.00 0.00 1.73
3544 4761 7.283807 GGTATTTGTGGGTTGGTTAGTAATAGG 59.716 40.741 0.00 0.00 0.00 2.57
3545 4762 6.451292 TTTGTGGGTTGGTTAGTAATAGGA 57.549 37.500 0.00 0.00 0.00 2.94
3546 4763 5.425196 TGTGGGTTGGTTAGTAATAGGAC 57.575 43.478 0.00 0.00 0.00 3.85
3547 4764 5.095809 TGTGGGTTGGTTAGTAATAGGACT 58.904 41.667 0.00 0.00 0.00 3.85
3548 4765 5.548836 TGTGGGTTGGTTAGTAATAGGACTT 59.451 40.000 0.00 0.00 0.00 3.01
3549 4766 6.044637 TGTGGGTTGGTTAGTAATAGGACTTT 59.955 38.462 0.00 0.00 0.00 2.66
3552 4769 8.667737 TGGGTTGGTTAGTAATAGGACTTTAAA 58.332 33.333 0.00 0.00 0.00 1.52
3588 4876 8.602424 TCAAAGATAACCCTTGAATAAGTGAGA 58.398 33.333 0.00 0.00 31.80 3.27
3589 4877 8.887717 CAAAGATAACCCTTGAATAAGTGAGAG 58.112 37.037 0.00 0.00 31.80 3.20
3646 4935 4.359971 TGAATCAATGATTGTTCAGGCG 57.640 40.909 13.82 0.00 34.73 5.52
3650 4939 5.587388 ATCAATGATTGTTCAGGCGATTT 57.413 34.783 4.93 0.00 34.73 2.17
3657 4946 5.123820 TGATTGTTCAGGCGATTTCCTTAAG 59.876 40.000 0.00 0.00 33.25 1.85
3667 4956 4.615223 GCGATTTCCTTAAGTGTTGGGTTC 60.615 45.833 0.97 0.00 0.00 3.62
3673 4962 6.947644 TCCTTAAGTGTTGGGTTCTTAAAC 57.052 37.500 0.97 0.00 34.64 2.01
3674 4963 6.424883 TCCTTAAGTGTTGGGTTCTTAAACA 58.575 36.000 0.97 0.00 37.10 2.83
3675 4964 6.544564 TCCTTAAGTGTTGGGTTCTTAAACAG 59.455 38.462 0.97 0.00 37.10 3.16
3676 4965 6.320418 CCTTAAGTGTTGGGTTCTTAAACAGT 59.680 38.462 0.97 0.00 38.73 3.55
3677 4966 5.830000 AAGTGTTGGGTTCTTAAACAGTC 57.170 39.130 0.00 0.00 36.66 3.51
3678 4967 5.112129 AGTGTTGGGTTCTTAAACAGTCT 57.888 39.130 0.00 0.00 33.27 3.24
3679 4968 4.881850 AGTGTTGGGTTCTTAAACAGTCTG 59.118 41.667 0.00 0.00 33.27 3.51
3680 4969 4.036380 GTGTTGGGTTCTTAAACAGTCTGG 59.964 45.833 4.53 0.00 37.10 3.86
3681 4970 4.204799 GTTGGGTTCTTAAACAGTCTGGT 58.795 43.478 4.53 0.00 37.10 4.00
3682 4971 4.513406 TGGGTTCTTAAACAGTCTGGTT 57.487 40.909 8.49 8.49 37.10 3.67
3683 4972 5.633655 TGGGTTCTTAAACAGTCTGGTTA 57.366 39.130 6.23 6.23 37.10 2.85
3684 4973 5.617252 TGGGTTCTTAAACAGTCTGGTTAG 58.383 41.667 10.20 5.79 37.10 2.34
3685 4974 4.454847 GGGTTCTTAAACAGTCTGGTTAGC 59.545 45.833 10.20 1.56 37.10 3.09
3686 4975 5.061179 GGTTCTTAAACAGTCTGGTTAGCA 58.939 41.667 10.20 0.00 37.10 3.49
3687 4976 5.049612 GGTTCTTAAACAGTCTGGTTAGCAC 60.050 44.000 10.20 8.40 37.10 4.40
3688 4977 5.546621 TCTTAAACAGTCTGGTTAGCACT 57.453 39.130 10.20 0.00 30.32 4.40
3689 4978 5.925509 TCTTAAACAGTCTGGTTAGCACTT 58.074 37.500 10.20 0.00 30.32 3.16
3690 4979 5.989777 TCTTAAACAGTCTGGTTAGCACTTC 59.010 40.000 10.20 0.00 30.32 3.01
3691 4980 2.841442 ACAGTCTGGTTAGCACTTCC 57.159 50.000 4.53 0.00 0.00 3.46
3692 4981 1.348036 ACAGTCTGGTTAGCACTTCCC 59.652 52.381 4.53 0.00 0.00 3.97
3693 4982 1.347707 CAGTCTGGTTAGCACTTCCCA 59.652 52.381 0.00 0.00 0.00 4.37
3694 4983 2.054799 AGTCTGGTTAGCACTTCCCAA 58.945 47.619 0.00 0.00 0.00 4.12
3695 4984 2.039084 AGTCTGGTTAGCACTTCCCAAG 59.961 50.000 0.00 0.00 0.00 3.61
3696 4985 2.038557 GTCTGGTTAGCACTTCCCAAGA 59.961 50.000 0.00 0.00 0.00 3.02
3697 4986 2.038557 TCTGGTTAGCACTTCCCAAGAC 59.961 50.000 0.00 0.00 0.00 3.01
3698 4987 1.771854 TGGTTAGCACTTCCCAAGACA 59.228 47.619 0.00 0.00 0.00 3.41
3699 4988 2.224523 TGGTTAGCACTTCCCAAGACAG 60.225 50.000 0.00 0.00 0.00 3.51
3700 4989 2.038557 GGTTAGCACTTCCCAAGACAGA 59.961 50.000 0.00 0.00 0.00 3.41
3701 4990 3.330267 GTTAGCACTTCCCAAGACAGAG 58.670 50.000 0.00 0.00 0.00 3.35
3702 4991 0.036022 AGCACTTCCCAAGACAGAGC 59.964 55.000 0.00 0.00 0.00 4.09
3703 4992 0.036022 GCACTTCCCAAGACAGAGCT 59.964 55.000 0.00 0.00 0.00 4.09
3704 4993 1.943507 GCACTTCCCAAGACAGAGCTC 60.944 57.143 5.27 5.27 0.00 4.09
3705 4994 1.345741 CACTTCCCAAGACAGAGCTCA 59.654 52.381 17.77 0.00 0.00 4.26
3706 4995 1.346068 ACTTCCCAAGACAGAGCTCAC 59.654 52.381 17.77 6.98 0.00 3.51
3707 4996 1.622811 CTTCCCAAGACAGAGCTCACT 59.377 52.381 17.77 9.29 0.00 3.41
3708 4997 2.604912 TCCCAAGACAGAGCTCACTA 57.395 50.000 17.77 0.00 0.00 2.74
3709 4998 2.889512 TCCCAAGACAGAGCTCACTAA 58.110 47.619 17.77 0.00 0.00 2.24
3710 4999 3.239449 TCCCAAGACAGAGCTCACTAAA 58.761 45.455 17.77 0.00 0.00 1.85
3711 5000 3.646162 TCCCAAGACAGAGCTCACTAAAA 59.354 43.478 17.77 0.00 0.00 1.52
3712 5001 4.287067 TCCCAAGACAGAGCTCACTAAAAT 59.713 41.667 17.77 0.00 0.00 1.82
3713 5002 5.006386 CCCAAGACAGAGCTCACTAAAATT 58.994 41.667 17.77 0.00 0.00 1.82
3714 5003 5.474876 CCCAAGACAGAGCTCACTAAAATTT 59.525 40.000 17.77 0.00 0.00 1.82
3715 5004 6.348868 CCCAAGACAGAGCTCACTAAAATTTC 60.349 42.308 17.77 0.00 0.00 2.17
3716 5005 6.348868 CCAAGACAGAGCTCACTAAAATTTCC 60.349 42.308 17.77 0.00 0.00 3.13
3717 5006 5.249420 AGACAGAGCTCACTAAAATTTCCC 58.751 41.667 17.77 0.00 0.00 3.97
3718 5007 5.013599 AGACAGAGCTCACTAAAATTTCCCT 59.986 40.000 17.77 0.00 0.00 4.20
3719 5008 5.635120 ACAGAGCTCACTAAAATTTCCCTT 58.365 37.500 17.77 0.00 0.00 3.95
3720 5009 5.474876 ACAGAGCTCACTAAAATTTCCCTTG 59.525 40.000 17.77 1.62 0.00 3.61
3721 5010 5.474876 CAGAGCTCACTAAAATTTCCCTTGT 59.525 40.000 17.77 0.00 0.00 3.16
3722 5011 6.655003 CAGAGCTCACTAAAATTTCCCTTGTA 59.345 38.462 17.77 0.00 0.00 2.41
3723 5012 7.174946 CAGAGCTCACTAAAATTTCCCTTGTAA 59.825 37.037 17.77 0.00 0.00 2.41
3724 5013 7.724061 AGAGCTCACTAAAATTTCCCTTGTAAA 59.276 33.333 17.77 0.00 0.00 2.01
3725 5014 7.658261 AGCTCACTAAAATTTCCCTTGTAAAC 58.342 34.615 0.00 0.00 0.00 2.01
3726 5015 7.505923 AGCTCACTAAAATTTCCCTTGTAAACT 59.494 33.333 0.00 0.00 0.00 2.66
3727 5016 7.808381 GCTCACTAAAATTTCCCTTGTAAACTC 59.192 37.037 0.00 0.00 0.00 3.01
3728 5017 7.867752 TCACTAAAATTTCCCTTGTAAACTCG 58.132 34.615 0.00 0.00 0.00 4.18
3729 5018 7.040961 TCACTAAAATTTCCCTTGTAAACTCGG 60.041 37.037 0.00 0.00 0.00 4.63
3730 5019 6.774170 ACTAAAATTTCCCTTGTAAACTCGGT 59.226 34.615 0.00 0.00 0.00 4.69
3731 5020 5.447624 AAATTTCCCTTGTAAACTCGGTG 57.552 39.130 0.00 0.00 0.00 4.94
3732 5021 3.842007 TTTCCCTTGTAAACTCGGTGA 57.158 42.857 0.00 0.00 0.00 4.02
3733 5022 4.360951 TTTCCCTTGTAAACTCGGTGAT 57.639 40.909 0.00 0.00 0.00 3.06
3734 5023 5.486735 TTTCCCTTGTAAACTCGGTGATA 57.513 39.130 0.00 0.00 0.00 2.15
3735 5024 4.730949 TCCCTTGTAAACTCGGTGATAG 57.269 45.455 0.00 0.00 0.00 2.08
3736 5025 3.118884 TCCCTTGTAAACTCGGTGATAGC 60.119 47.826 0.00 0.00 0.00 2.97
3737 5026 3.195661 CCTTGTAAACTCGGTGATAGCC 58.804 50.000 0.00 0.00 0.00 3.93
3738 5027 3.118738 CCTTGTAAACTCGGTGATAGCCT 60.119 47.826 0.00 0.00 0.00 4.58
3739 5028 3.520290 TGTAAACTCGGTGATAGCCTG 57.480 47.619 0.00 0.00 0.00 4.85
3740 5029 2.167693 TGTAAACTCGGTGATAGCCTGG 59.832 50.000 0.00 0.00 0.00 4.45
3741 5030 1.276622 AAACTCGGTGATAGCCTGGT 58.723 50.000 0.00 0.00 0.00 4.00
3742 5031 0.537188 AACTCGGTGATAGCCTGGTG 59.463 55.000 0.00 0.00 0.00 4.17
3743 5032 1.330655 ACTCGGTGATAGCCTGGTGG 61.331 60.000 0.00 0.00 0.00 4.61
3744 5033 1.305802 TCGGTGATAGCCTGGTGGT 60.306 57.895 0.00 0.00 35.27 4.16
3745 5034 0.907704 TCGGTGATAGCCTGGTGGTT 60.908 55.000 0.00 0.00 35.27 3.67
3746 5035 0.744414 CGGTGATAGCCTGGTGGTTG 60.744 60.000 0.00 0.00 35.27 3.77
3747 5036 0.618458 GGTGATAGCCTGGTGGTTGA 59.382 55.000 0.00 0.00 35.27 3.18
3748 5037 1.679032 GGTGATAGCCTGGTGGTTGAC 60.679 57.143 0.00 0.00 35.27 3.18
3749 5038 1.279271 GTGATAGCCTGGTGGTTGACT 59.721 52.381 0.00 0.00 35.27 3.41
3750 5039 1.985159 TGATAGCCTGGTGGTTGACTT 59.015 47.619 0.00 0.00 35.27 3.01
3751 5040 2.290260 TGATAGCCTGGTGGTTGACTTG 60.290 50.000 0.00 0.00 35.27 3.16
3752 5041 1.429930 TAGCCTGGTGGTTGACTTGA 58.570 50.000 0.00 0.00 35.27 3.02
3753 5042 0.550914 AGCCTGGTGGTTGACTTGAA 59.449 50.000 0.00 0.00 35.27 2.69
3754 5043 0.668535 GCCTGGTGGTTGACTTGAAC 59.331 55.000 0.00 0.00 35.27 3.18
3755 5044 2.021723 GCCTGGTGGTTGACTTGAACA 61.022 52.381 0.00 0.00 35.27 3.18
3756 5045 2.374184 CCTGGTGGTTGACTTGAACAA 58.626 47.619 0.00 0.00 0.00 2.83
3757 5046 2.358898 CCTGGTGGTTGACTTGAACAAG 59.641 50.000 12.22 12.22 43.79 3.16
3758 5047 1.748493 TGGTGGTTGACTTGAACAAGC 59.252 47.619 13.50 0.00 41.99 4.01
3759 5048 2.024414 GGTGGTTGACTTGAACAAGCT 58.976 47.619 13.50 2.69 43.30 3.74
3760 5049 2.427095 GGTGGTTGACTTGAACAAGCTT 59.573 45.455 13.50 0.00 43.30 3.74
3761 5050 3.489229 GGTGGTTGACTTGAACAAGCTTC 60.489 47.826 13.50 6.39 43.30 3.86
3762 5051 3.128589 GTGGTTGACTTGAACAAGCTTCA 59.871 43.478 13.50 8.62 43.30 3.02
3763 5052 3.953612 TGGTTGACTTGAACAAGCTTCAT 59.046 39.130 13.50 0.00 43.30 2.57
3764 5053 4.402155 TGGTTGACTTGAACAAGCTTCATT 59.598 37.500 13.50 0.00 43.30 2.57
3765 5054 4.978580 GGTTGACTTGAACAAGCTTCATTC 59.021 41.667 13.50 11.51 41.99 2.67
3766 5055 5.450412 GGTTGACTTGAACAAGCTTCATTCA 60.450 40.000 15.59 15.59 41.99 2.57
3767 5056 5.833406 TGACTTGAACAAGCTTCATTCAA 57.167 34.783 24.10 24.10 41.99 2.69
3768 5057 6.206395 TGACTTGAACAAGCTTCATTCAAA 57.794 33.333 25.00 14.60 40.74 2.69
3769 5058 6.267817 TGACTTGAACAAGCTTCATTCAAAG 58.732 36.000 25.00 21.40 40.74 2.77
3770 5059 6.127647 TGACTTGAACAAGCTTCATTCAAAGT 60.128 34.615 25.00 23.26 40.74 2.66
3771 5060 6.633856 ACTTGAACAAGCTTCATTCAAAGTT 58.366 32.000 25.00 13.22 40.74 2.66
3772 5061 6.753744 ACTTGAACAAGCTTCATTCAAAGTTC 59.246 34.615 25.00 19.27 40.74 3.01
3773 5062 6.455360 TGAACAAGCTTCATTCAAAGTTCT 57.545 33.333 16.74 0.00 36.15 3.01
3774 5063 6.498304 TGAACAAGCTTCATTCAAAGTTCTC 58.502 36.000 16.74 0.00 36.15 2.87
3775 5064 6.095300 TGAACAAGCTTCATTCAAAGTTCTCA 59.905 34.615 16.74 1.35 36.15 3.27
3776 5065 6.645790 ACAAGCTTCATTCAAAGTTCTCAT 57.354 33.333 0.00 0.00 0.00 2.90
3777 5066 6.675987 ACAAGCTTCATTCAAAGTTCTCATC 58.324 36.000 0.00 0.00 0.00 2.92
3778 5067 5.893897 AGCTTCATTCAAAGTTCTCATCC 57.106 39.130 0.00 0.00 0.00 3.51
3779 5068 5.319453 AGCTTCATTCAAAGTTCTCATCCA 58.681 37.500 0.00 0.00 0.00 3.41
3780 5069 5.950549 AGCTTCATTCAAAGTTCTCATCCAT 59.049 36.000 0.00 0.00 0.00 3.41
3781 5070 7.114754 AGCTTCATTCAAAGTTCTCATCCATA 58.885 34.615 0.00 0.00 0.00 2.74
3782 5071 7.066766 AGCTTCATTCAAAGTTCTCATCCATAC 59.933 37.037 0.00 0.00 0.00 2.39
3783 5072 7.066766 GCTTCATTCAAAGTTCTCATCCATACT 59.933 37.037 0.00 0.00 0.00 2.12
3784 5073 7.854557 TCATTCAAAGTTCTCATCCATACTG 57.145 36.000 0.00 0.00 0.00 2.74
3785 5074 7.397221 TCATTCAAAGTTCTCATCCATACTGT 58.603 34.615 0.00 0.00 0.00 3.55
3786 5075 7.335171 TCATTCAAAGTTCTCATCCATACTGTG 59.665 37.037 0.00 0.00 0.00 3.66
3787 5076 4.937620 TCAAAGTTCTCATCCATACTGTGC 59.062 41.667 0.00 0.00 0.00 4.57
3788 5077 4.833478 AAGTTCTCATCCATACTGTGCT 57.167 40.909 0.00 0.00 0.00 4.40
3789 5078 5.939764 AAGTTCTCATCCATACTGTGCTA 57.060 39.130 0.00 0.00 0.00 3.49
3790 5079 5.528043 AGTTCTCATCCATACTGTGCTAG 57.472 43.478 0.00 0.00 0.00 3.42
3791 5080 4.343526 AGTTCTCATCCATACTGTGCTAGG 59.656 45.833 0.00 0.00 0.00 3.02
3792 5081 3.234353 TCTCATCCATACTGTGCTAGGG 58.766 50.000 0.00 0.00 0.00 3.53
3793 5082 3.117131 TCTCATCCATACTGTGCTAGGGA 60.117 47.826 0.00 0.00 0.00 4.20
3794 5083 3.234353 TCATCCATACTGTGCTAGGGAG 58.766 50.000 0.00 0.00 0.00 4.30
3804 5093 3.663644 GCTAGGGAGCTCGTAAACC 57.336 57.895 7.83 2.45 45.98 3.27
3805 5094 0.104487 GCTAGGGAGCTCGTAAACCC 59.896 60.000 7.83 2.25 45.98 4.11
3806 5095 4.890207 AGGGAGCTCGTAAACCCT 57.110 55.556 7.83 4.98 46.64 4.34
3807 5096 4.934989 GGGAGCTCGTAAACCCTG 57.065 61.111 7.83 0.00 39.28 4.45
3808 5097 1.449778 GGGAGCTCGTAAACCCTGC 60.450 63.158 7.83 0.00 39.28 4.85
3809 5098 1.449778 GGAGCTCGTAAACCCTGCC 60.450 63.158 7.83 0.00 0.00 4.85
3810 5099 1.810030 GAGCTCGTAAACCCTGCCG 60.810 63.158 0.00 0.00 0.00 5.69
3811 5100 2.818274 GCTCGTAAACCCTGCCGG 60.818 66.667 0.00 0.00 37.81 6.13
3812 5101 2.818274 CTCGTAAACCCTGCCGGC 60.818 66.667 22.73 22.73 33.26 6.13
3813 5102 3.310860 CTCGTAAACCCTGCCGGCT 62.311 63.158 29.70 8.67 33.26 5.52
3814 5103 1.952102 CTCGTAAACCCTGCCGGCTA 61.952 60.000 29.70 13.31 33.26 3.93
3815 5104 1.520787 CGTAAACCCTGCCGGCTAG 60.521 63.158 29.70 21.88 33.26 3.42
3816 5105 1.818363 GTAAACCCTGCCGGCTAGC 60.818 63.158 29.70 6.04 33.26 3.42
3817 5106 2.294839 TAAACCCTGCCGGCTAGCA 61.295 57.895 29.70 5.90 41.46 3.49
3818 5107 2.530958 TAAACCCTGCCGGCTAGCAC 62.531 60.000 29.70 5.85 38.00 4.40
3820 5109 4.181010 CCCTGCCGGCTAGCACAT 62.181 66.667 29.70 0.00 38.00 3.21
3821 5110 2.898840 CCTGCCGGCTAGCACATG 60.899 66.667 29.70 6.37 38.00 3.21
3822 5111 2.898840 CTGCCGGCTAGCACATGG 60.899 66.667 29.70 13.11 38.00 3.66
3823 5112 3.687321 CTGCCGGCTAGCACATGGT 62.687 63.158 29.70 0.00 38.00 3.55
3824 5113 2.438434 GCCGGCTAGCACATGGTT 60.438 61.111 22.15 0.00 0.00 3.67
3825 5114 2.046285 GCCGGCTAGCACATGGTTT 61.046 57.895 22.15 0.00 0.00 3.27
3826 5115 1.595093 GCCGGCTAGCACATGGTTTT 61.595 55.000 22.15 0.00 0.00 2.43
3827 5116 0.887933 CCGGCTAGCACATGGTTTTT 59.112 50.000 18.24 0.00 0.00 1.94
3828 5117 2.088423 CCGGCTAGCACATGGTTTTTA 58.912 47.619 18.24 0.00 0.00 1.52
3829 5118 2.687935 CCGGCTAGCACATGGTTTTTAT 59.312 45.455 18.24 0.00 0.00 1.40
3830 5119 3.130340 CCGGCTAGCACATGGTTTTTATT 59.870 43.478 18.24 0.00 0.00 1.40
3831 5120 4.104776 CGGCTAGCACATGGTTTTTATTG 58.895 43.478 18.24 0.00 0.00 1.90
3832 5121 4.380444 CGGCTAGCACATGGTTTTTATTGT 60.380 41.667 18.24 0.00 0.00 2.71
3833 5122 5.478407 GGCTAGCACATGGTTTTTATTGTT 58.522 37.500 18.24 0.00 0.00 2.83
3834 5123 6.623986 CGGCTAGCACATGGTTTTTATTGTTA 60.624 38.462 18.24 0.00 0.00 2.41
3835 5124 6.530181 GGCTAGCACATGGTTTTTATTGTTAC 59.470 38.462 18.24 0.00 0.00 2.50
3836 5125 7.087639 GCTAGCACATGGTTTTTATTGTTACA 58.912 34.615 10.63 0.00 0.00 2.41
3837 5126 7.061789 GCTAGCACATGGTTTTTATTGTTACAC 59.938 37.037 10.63 0.00 0.00 2.90
3838 5127 7.049799 AGCACATGGTTTTTATTGTTACACT 57.950 32.000 0.00 0.00 0.00 3.55
3839 5128 6.922957 AGCACATGGTTTTTATTGTTACACTG 59.077 34.615 0.00 0.00 0.00 3.66
3840 5129 6.346518 GCACATGGTTTTTATTGTTACACTGC 60.347 38.462 0.00 0.00 0.00 4.40
3841 5130 6.145371 CACATGGTTTTTATTGTTACACTGCC 59.855 38.462 0.00 0.00 0.00 4.85
3842 5131 6.041523 ACATGGTTTTTATTGTTACACTGCCT 59.958 34.615 0.00 0.00 0.00 4.75
3843 5132 6.472686 TGGTTTTTATTGTTACACTGCCTT 57.527 33.333 0.00 0.00 0.00 4.35
3844 5133 6.276847 TGGTTTTTATTGTTACACTGCCTTG 58.723 36.000 0.00 0.00 0.00 3.61
3845 5134 6.127310 TGGTTTTTATTGTTACACTGCCTTGT 60.127 34.615 0.00 0.00 0.00 3.16
3846 5135 7.068348 TGGTTTTTATTGTTACACTGCCTTGTA 59.932 33.333 0.00 0.00 0.00 2.41
3847 5136 7.380333 GGTTTTTATTGTTACACTGCCTTGTAC 59.620 37.037 0.00 0.00 31.53 2.90
3848 5137 7.811117 TTTTATTGTTACACTGCCTTGTACT 57.189 32.000 0.00 0.00 31.53 2.73
3849 5138 8.905660 TTTTATTGTTACACTGCCTTGTACTA 57.094 30.769 0.00 0.00 31.53 1.82
3850 5139 7.894376 TTATTGTTACACTGCCTTGTACTAC 57.106 36.000 0.00 0.00 31.53 2.73
3851 5140 4.261578 TGTTACACTGCCTTGTACTACC 57.738 45.455 0.00 0.00 31.53 3.18
3852 5141 3.899360 TGTTACACTGCCTTGTACTACCT 59.101 43.478 0.00 0.00 31.53 3.08
3853 5142 4.021719 TGTTACACTGCCTTGTACTACCTC 60.022 45.833 0.00 0.00 31.53 3.85
3854 5143 2.890814 ACACTGCCTTGTACTACCTCT 58.109 47.619 0.00 0.00 0.00 3.69
3855 5144 2.563179 ACACTGCCTTGTACTACCTCTG 59.437 50.000 0.00 0.00 0.00 3.35
3856 5145 2.563179 CACTGCCTTGTACTACCTCTGT 59.437 50.000 0.00 0.00 0.00 3.41
3857 5146 3.762288 CACTGCCTTGTACTACCTCTGTA 59.238 47.826 0.00 0.00 0.00 2.74
3858 5147 3.762823 ACTGCCTTGTACTACCTCTGTAC 59.237 47.826 0.00 0.00 40.27 2.90
3859 5148 3.094572 TGCCTTGTACTACCTCTGTACC 58.905 50.000 0.00 0.00 39.42 3.34
3860 5149 3.094572 GCCTTGTACTACCTCTGTACCA 58.905 50.000 0.00 0.00 39.42 3.25
3861 5150 3.512724 GCCTTGTACTACCTCTGTACCAA 59.487 47.826 0.00 0.00 39.42 3.67
3862 5151 4.020839 GCCTTGTACTACCTCTGTACCAAA 60.021 45.833 0.00 0.00 39.42 3.28
3863 5152 5.511888 GCCTTGTACTACCTCTGTACCAAAA 60.512 44.000 0.00 0.00 39.42 2.44
3864 5153 6.527423 CCTTGTACTACCTCTGTACCAAAAA 58.473 40.000 0.00 0.00 39.42 1.94
3865 5154 7.166167 CCTTGTACTACCTCTGTACCAAAAAT 58.834 38.462 0.00 0.00 39.42 1.82
3866 5155 8.316214 CCTTGTACTACCTCTGTACCAAAAATA 58.684 37.037 0.00 0.00 39.42 1.40
3867 5156 9.715121 CTTGTACTACCTCTGTACCAAAAATAA 57.285 33.333 0.00 0.00 39.42 1.40
3868 5157 9.715121 TTGTACTACCTCTGTACCAAAAATAAG 57.285 33.333 0.00 0.00 39.42 1.73
3869 5158 9.092338 TGTACTACCTCTGTACCAAAAATAAGA 57.908 33.333 0.00 0.00 39.42 2.10
3870 5159 9.363763 GTACTACCTCTGTACCAAAAATAAGAC 57.636 37.037 0.00 0.00 35.52 3.01
3871 5160 7.970102 ACTACCTCTGTACCAAAAATAAGACA 58.030 34.615 0.00 0.00 0.00 3.41
3872 5161 8.603304 ACTACCTCTGTACCAAAAATAAGACAT 58.397 33.333 0.00 0.00 0.00 3.06
3873 5162 9.449719 CTACCTCTGTACCAAAAATAAGACATT 57.550 33.333 0.00 0.00 0.00 2.71
3874 5163 8.706322 ACCTCTGTACCAAAAATAAGACATTT 57.294 30.769 0.00 0.00 0.00 2.32
3875 5164 9.143155 ACCTCTGTACCAAAAATAAGACATTTT 57.857 29.630 0.00 0.00 33.12 1.82
3876 5165 9.981114 CCTCTGTACCAAAAATAAGACATTTTT 57.019 29.630 2.64 2.64 40.58 1.94
3884 5173 7.853524 CAAAAATAAGACATTTTTGCAGCTCA 58.146 30.769 17.40 0.00 45.71 4.26
3885 5174 8.336806 CAAAAATAAGACATTTTTGCAGCTCAA 58.663 29.630 17.40 0.00 45.71 3.02
3886 5175 8.611654 AAAATAAGACATTTTTGCAGCTCAAT 57.388 26.923 0.00 0.00 34.12 2.57
3887 5176 8.611654 AAATAAGACATTTTTGCAGCTCAATT 57.388 26.923 0.00 0.00 34.12 2.32
3888 5177 8.611654 AATAAGACATTTTTGCAGCTCAATTT 57.388 26.923 0.00 0.00 34.12 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 1.032014 GAAGGCACCACACATGTTGT 58.968 50.000 0.00 0.00 39.97 3.32
8 9 0.040157 CGAAGGCACCACACATGTTG 60.040 55.000 0.00 0.00 0.00 3.33
23 24 1.068333 CCTTCAATGTTGCCACCGAAG 60.068 52.381 0.00 0.00 34.34 3.79
24 25 0.958091 CCTTCAATGTTGCCACCGAA 59.042 50.000 0.00 0.00 0.00 4.30
25 26 0.179004 ACCTTCAATGTTGCCACCGA 60.179 50.000 0.00 0.00 0.00 4.69
26 27 0.039256 CACCTTCAATGTTGCCACCG 60.039 55.000 0.00 0.00 0.00 4.94
27 28 0.319813 GCACCTTCAATGTTGCCACC 60.320 55.000 0.00 0.00 0.00 4.61
28 29 0.319813 GGCACCTTCAATGTTGCCAC 60.320 55.000 6.58 0.00 41.63 5.01
29 30 0.469705 AGGCACCTTCAATGTTGCCA 60.470 50.000 13.63 0.00 44.18 4.92
30 31 0.681175 AAGGCACCTTCAATGTTGCC 59.319 50.000 3.16 3.16 42.27 4.52
31 32 2.137523 CAAAGGCACCTTCAATGTTGC 58.862 47.619 1.61 0.00 34.84 4.17
32 33 2.102925 ACCAAAGGCACCTTCAATGTTG 59.897 45.455 1.61 0.00 34.84 3.33
33 34 2.102925 CACCAAAGGCACCTTCAATGTT 59.897 45.455 1.61 0.00 34.84 2.71
34 35 1.688197 CACCAAAGGCACCTTCAATGT 59.312 47.619 1.61 0.00 34.84 2.71
35 36 1.001181 CCACCAAAGGCACCTTCAATG 59.999 52.381 1.61 0.00 34.84 2.82
36 37 1.341080 CCACCAAAGGCACCTTCAAT 58.659 50.000 1.61 0.00 34.84 2.57
37 38 2.819477 CCACCAAAGGCACCTTCAA 58.181 52.632 1.61 0.00 34.84 2.69
38 39 4.597032 CCACCAAAGGCACCTTCA 57.403 55.556 1.61 0.00 34.84 3.02
51 52 1.606885 CCACCATCCATGTTGCCACC 61.607 60.000 0.00 0.00 0.00 4.61
95 117 1.299976 GCCATCGAAACCACCTCCT 59.700 57.895 0.00 0.00 0.00 3.69
104 126 1.811965 CCACTCATGTTGCCATCGAAA 59.188 47.619 0.00 0.00 0.00 3.46
211 234 0.517316 AATGGCTTCTTTGTCGACGC 59.483 50.000 11.62 6.69 0.00 5.19
321 357 4.946478 TCAAACAAAATTCGGGTCCAAT 57.054 36.364 0.00 0.00 0.00 3.16
377 415 6.263168 ACCTGAACTCAAGTTTCATACCAAAG 59.737 38.462 0.00 0.00 38.56 2.77
479 1223 1.705337 TAAGCATTTCAGCCGCGCTC 61.705 55.000 5.56 0.00 36.40 5.03
482 1226 0.378257 ACATAAGCATTTCAGCCGCG 59.622 50.000 0.00 0.00 34.23 6.46
519 1263 5.669164 AATAATGTAAAACGGCCAATGGT 57.331 34.783 2.24 0.00 0.00 3.55
610 1357 6.823286 TGGAGGGAGTAATTTACATCATCA 57.177 37.500 9.15 0.00 0.00 3.07
625 1372 4.130118 CAAGTATTTTCGGATGGAGGGAG 58.870 47.826 0.00 0.00 0.00 4.30
626 1373 3.521937 ACAAGTATTTTCGGATGGAGGGA 59.478 43.478 0.00 0.00 0.00 4.20
627 1374 3.877508 GACAAGTATTTTCGGATGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
628 1375 4.513442 TGACAAGTATTTTCGGATGGAGG 58.487 43.478 0.00 0.00 0.00 4.30
629 1376 5.817296 TGATGACAAGTATTTTCGGATGGAG 59.183 40.000 0.00 0.00 0.00 3.86
630 1377 5.739959 TGATGACAAGTATTTTCGGATGGA 58.260 37.500 0.00 0.00 0.00 3.41
631 1378 6.435430 TTGATGACAAGTATTTTCGGATGG 57.565 37.500 0.00 0.00 0.00 3.51
632 1379 8.915871 ATTTTGATGACAAGTATTTTCGGATG 57.084 30.769 0.00 0.00 37.32 3.51
634 1381 9.443323 TCTATTTTGATGACAAGTATTTTCGGA 57.557 29.630 0.00 0.00 37.32 4.55
711 1458 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
712 1459 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
713 1460 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
714 1461 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
715 1462 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
716 1463 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
717 1464 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
718 1465 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
719 1466 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
720 1467 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
721 1468 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
722 1469 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
723 1470 2.660189 TCCGTCCGGAAATACTTGTC 57.340 50.000 5.23 0.00 42.05 3.18
734 1481 3.510360 AGATAAATACTCCATCCGTCCGG 59.490 47.826 0.00 0.00 0.00 5.14
735 1482 4.785511 AGATAAATACTCCATCCGTCCG 57.214 45.455 0.00 0.00 0.00 4.79
736 1483 7.122948 AGTGATAGATAAATACTCCATCCGTCC 59.877 40.741 0.00 0.00 0.00 4.79
737 1484 8.057536 AGTGATAGATAAATACTCCATCCGTC 57.942 38.462 0.00 0.00 0.00 4.79
738 1485 8.423906 AAGTGATAGATAAATACTCCATCCGT 57.576 34.615 0.00 0.00 0.00 4.69
739 1486 9.712305 AAAAGTGATAGATAAATACTCCATCCG 57.288 33.333 0.00 0.00 0.00 4.18
827 1576 3.334583 AGCAGCTCGAAATTTACCAGA 57.665 42.857 0.00 0.00 0.00 3.86
835 1584 5.858381 TGGATAAGATAAGCAGCTCGAAAT 58.142 37.500 0.00 0.00 0.00 2.17
861 1610 7.100409 AGCTAATCCTCTCTTGTTGTTCTTAC 58.900 38.462 0.00 0.00 0.00 2.34
902 1665 6.429151 AGAAAGAAACCCATCATCATCATCA 58.571 36.000 0.00 0.00 0.00 3.07
903 1666 6.956202 AGAAAGAAACCCATCATCATCATC 57.044 37.500 0.00 0.00 0.00 2.92
904 1667 6.039047 CGAAGAAAGAAACCCATCATCATCAT 59.961 38.462 0.00 0.00 0.00 2.45
905 1668 5.355071 CGAAGAAAGAAACCCATCATCATCA 59.645 40.000 0.00 0.00 0.00 3.07
906 1669 5.355350 ACGAAGAAAGAAACCCATCATCATC 59.645 40.000 0.00 0.00 0.00 2.92
917 1680 6.165659 TGCTGCTAATACGAAGAAAGAAAC 57.834 37.500 0.00 0.00 0.00 2.78
920 1683 3.865745 GCTGCTGCTAATACGAAGAAAGA 59.134 43.478 8.53 0.00 36.03 2.52
924 1687 2.814269 CTGCTGCTGCTAATACGAAGA 58.186 47.619 17.00 0.00 40.48 2.87
1674 2469 5.688766 GCAGAGAGAAATTATACCCTTGGCT 60.689 44.000 0.00 0.00 0.00 4.75
1680 2475 8.512966 AAAAAGAGCAGAGAGAAATTATACCC 57.487 34.615 0.00 0.00 0.00 3.69
1703 2498 3.520569 GGCAACAGCACTGAAAAGAAAA 58.479 40.909 4.31 0.00 0.00 2.29
1722 2517 1.448013 GTACAGAACAGAGGCGGGC 60.448 63.158 0.00 0.00 0.00 6.13
1723 2518 0.173708 GAGTACAGAACAGAGGCGGG 59.826 60.000 0.00 0.00 0.00 6.13
1724 2519 1.135257 CAGAGTACAGAACAGAGGCGG 60.135 57.143 0.00 0.00 0.00 6.13
1725 2520 1.734047 GCAGAGTACAGAACAGAGGCG 60.734 57.143 0.00 0.00 0.00 5.52
1802 2598 6.778821 TCTTCTGTAGGATGTGAAATTCCAA 58.221 36.000 0.00 0.00 34.27 3.53
1815 2611 4.040461 CCAAACAAGGACTCTTCTGTAGGA 59.960 45.833 0.00 0.00 0.00 2.94
1822 2618 4.451900 TCAACTCCAAACAAGGACTCTTC 58.548 43.478 0.00 0.00 33.19 2.87
1921 2740 2.606725 GCAACCGATCTGAAGAGTGATG 59.393 50.000 0.00 0.00 0.00 3.07
1922 2741 2.234661 TGCAACCGATCTGAAGAGTGAT 59.765 45.455 0.00 0.00 0.00 3.06
1923 2742 1.618343 TGCAACCGATCTGAAGAGTGA 59.382 47.619 0.00 0.00 0.00 3.41
1924 2743 1.998315 CTGCAACCGATCTGAAGAGTG 59.002 52.381 0.00 0.00 0.00 3.51
1925 2744 1.895798 TCTGCAACCGATCTGAAGAGT 59.104 47.619 0.00 0.00 0.00 3.24
1926 2745 2.538437 CTCTGCAACCGATCTGAAGAG 58.462 52.381 4.48 4.48 39.65 2.85
1927 2746 1.895798 ACTCTGCAACCGATCTGAAGA 59.104 47.619 0.00 0.00 0.00 2.87
1928 2747 2.376808 ACTCTGCAACCGATCTGAAG 57.623 50.000 0.00 0.00 0.00 3.02
1929 2748 2.037121 TCAACTCTGCAACCGATCTGAA 59.963 45.455 0.00 0.00 0.00 3.02
1930 2749 1.618343 TCAACTCTGCAACCGATCTGA 59.382 47.619 0.00 0.00 0.00 3.27
1931 2750 1.998315 CTCAACTCTGCAACCGATCTG 59.002 52.381 0.00 0.00 0.00 2.90
1932 2751 1.895798 TCTCAACTCTGCAACCGATCT 59.104 47.619 0.00 0.00 0.00 2.75
1933 2752 2.370281 TCTCAACTCTGCAACCGATC 57.630 50.000 0.00 0.00 0.00 3.69
1934 2753 2.224281 TGTTCTCAACTCTGCAACCGAT 60.224 45.455 0.00 0.00 0.00 4.18
1935 2754 1.138069 TGTTCTCAACTCTGCAACCGA 59.862 47.619 0.00 0.00 0.00 4.69
1936 2755 1.581934 TGTTCTCAACTCTGCAACCG 58.418 50.000 0.00 0.00 0.00 4.44
1937 2756 3.793465 GCTTTGTTCTCAACTCTGCAACC 60.793 47.826 0.00 0.00 32.93 3.77
1938 2757 3.065925 AGCTTTGTTCTCAACTCTGCAAC 59.934 43.478 0.00 0.00 32.93 4.17
1939 2758 3.065786 CAGCTTTGTTCTCAACTCTGCAA 59.934 43.478 0.00 0.00 32.93 4.08
1940 2759 2.615447 CAGCTTTGTTCTCAACTCTGCA 59.385 45.455 0.00 0.00 32.93 4.41
1941 2760 2.615912 ACAGCTTTGTTCTCAACTCTGC 59.384 45.455 0.00 0.00 37.00 4.26
1942 2761 5.053145 ACTACAGCTTTGTTCTCAACTCTG 58.947 41.667 0.00 0.00 38.23 3.35
1943 2762 5.283457 ACTACAGCTTTGTTCTCAACTCT 57.717 39.130 0.00 0.00 32.93 3.24
1944 2763 8.812329 CATATACTACAGCTTTGTTCTCAACTC 58.188 37.037 0.00 0.00 32.93 3.01
1945 2764 7.278868 GCATATACTACAGCTTTGTTCTCAACT 59.721 37.037 0.00 0.00 32.93 3.16
1946 2765 7.278868 AGCATATACTACAGCTTTGTTCTCAAC 59.721 37.037 0.00 0.00 32.52 3.18
1947 2766 7.278646 CAGCATATACTACAGCTTTGTTCTCAA 59.721 37.037 0.00 0.00 34.61 3.02
1948 2767 6.758416 CAGCATATACTACAGCTTTGTTCTCA 59.242 38.462 0.00 0.00 34.61 3.27
1949 2768 6.758886 ACAGCATATACTACAGCTTTGTTCTC 59.241 38.462 0.00 0.00 34.61 2.87
1950 2769 6.644347 ACAGCATATACTACAGCTTTGTTCT 58.356 36.000 0.00 0.00 34.61 3.01
1951 2770 6.535150 TGACAGCATATACTACAGCTTTGTTC 59.465 38.462 0.00 0.00 34.61 3.18
1952 2771 6.406370 TGACAGCATATACTACAGCTTTGTT 58.594 36.000 0.00 0.00 34.61 2.83
1953 2772 5.977635 TGACAGCATATACTACAGCTTTGT 58.022 37.500 0.00 0.00 34.61 2.83
1954 2773 6.908870 TTGACAGCATATACTACAGCTTTG 57.091 37.500 0.00 0.00 34.61 2.77
1955 2774 9.613428 TTTATTGACAGCATATACTACAGCTTT 57.387 29.630 0.00 0.00 34.61 3.51
1956 2775 9.784531 ATTTATTGACAGCATATACTACAGCTT 57.215 29.630 0.00 0.00 34.61 3.74
1957 2776 9.429359 GATTTATTGACAGCATATACTACAGCT 57.571 33.333 0.00 0.00 37.95 4.24
1958 2777 9.429359 AGATTTATTGACAGCATATACTACAGC 57.571 33.333 0.00 0.00 0.00 4.40
2076 2897 7.503566 TCTCTTTTTCAGAATCAGAACCAACAT 59.496 33.333 0.00 0.00 0.00 2.71
2077 2898 6.828273 TCTCTTTTTCAGAATCAGAACCAACA 59.172 34.615 0.00 0.00 0.00 3.33
2078 2899 7.227512 TCTCTCTTTTTCAGAATCAGAACCAAC 59.772 37.037 0.00 0.00 0.00 3.77
2079 2900 7.282585 TCTCTCTTTTTCAGAATCAGAACCAA 58.717 34.615 0.00 0.00 0.00 3.67
2080 2901 6.830912 TCTCTCTTTTTCAGAATCAGAACCA 58.169 36.000 0.00 0.00 0.00 3.67
2081 2902 6.371271 CCTCTCTCTTTTTCAGAATCAGAACC 59.629 42.308 0.00 0.00 0.00 3.62
2082 2903 6.934083 ACCTCTCTCTTTTTCAGAATCAGAAC 59.066 38.462 0.00 0.00 0.00 3.01
2093 2914 9.274206 ACATGTAGTTTAACCTCTCTCTTTTTC 57.726 33.333 0.00 0.00 0.00 2.29
2094 2915 9.628500 AACATGTAGTTTAACCTCTCTCTTTTT 57.372 29.630 0.00 0.00 37.03 1.94
2165 2986 7.404671 AATTCTAAAATACCGGCAAATCACT 57.595 32.000 0.00 0.00 0.00 3.41
2191 3016 5.149977 GGAATTCGAGAAAGAAAGCTTGTG 58.850 41.667 0.00 0.00 33.79 3.33
2207 3053 3.252974 AGCTGGTAGAGTTGGAATTCG 57.747 47.619 0.00 0.00 0.00 3.34
2236 3082 8.647796 ACCACGGAATGAGAACATAGATAAATA 58.352 33.333 0.00 0.00 35.50 1.40
2288 3272 6.967199 GGATTTTGCTGCTTAATGTAGTACAC 59.033 38.462 4.80 0.00 0.00 2.90
2324 3308 3.392228 TGCCTCTGCAACCGATCT 58.608 55.556 0.00 0.00 46.66 2.75
2342 3326 2.284190 GACACTGGAAATAGAGCAGCC 58.716 52.381 0.00 0.00 0.00 4.85
2343 3327 2.977914 TGACACTGGAAATAGAGCAGC 58.022 47.619 0.00 0.00 0.00 5.25
2359 3343 5.690865 ACTTTCCAGTTTACTTCCATGACA 58.309 37.500 0.00 0.00 0.00 3.58
2411 3397 7.245604 TCATTTGATTGATTCAAGTGTCATCG 58.754 34.615 5.21 0.00 46.58 3.84
2416 3402 6.751157 TGCTTCATTTGATTGATTCAAGTGT 58.249 32.000 5.21 0.00 46.58 3.55
2451 3443 4.586841 TGGTGAATTTCGAACCCTTCAAAT 59.413 37.500 14.94 0.00 32.70 2.32
2455 3448 3.058224 CACTGGTGAATTTCGAACCCTTC 60.058 47.826 0.00 2.38 32.70 3.46
2564 3557 3.129113 TGTCTTATGCATGCACATGGAAC 59.871 43.478 25.37 16.30 42.36 3.62
2566 3559 3.002038 TGTCTTATGCATGCACATGGA 57.998 42.857 25.37 15.61 43.22 3.41
2567 3560 3.305131 GGATGTCTTATGCATGCACATGG 60.305 47.826 25.37 13.48 39.16 3.66
2568 3561 3.305131 GGGATGTCTTATGCATGCACATG 60.305 47.826 25.37 14.58 41.60 3.21
2570 3563 2.092267 AGGGATGTCTTATGCATGCACA 60.092 45.455 25.37 16.64 36.58 4.57
2572 3565 2.578786 CAGGGATGTCTTATGCATGCA 58.421 47.619 25.04 25.04 36.58 3.96
2573 3566 1.268899 GCAGGGATGTCTTATGCATGC 59.731 52.381 11.82 11.82 39.63 4.06
2586 3597 1.589716 GAACAGCTTTGCGCAGGGAT 61.590 55.000 11.31 3.01 42.61 3.85
2599 3610 5.335127 CATGCATAGTAAACAAGGAACAGC 58.665 41.667 0.00 0.00 0.00 4.40
2601 3612 4.157656 GGCATGCATAGTAAACAAGGAACA 59.842 41.667 21.36 0.00 0.00 3.18
2605 3616 3.181487 GGTGGCATGCATAGTAAACAAGG 60.181 47.826 21.36 0.00 0.00 3.61
2612 3623 2.426738 GCAAAAGGTGGCATGCATAGTA 59.573 45.455 21.36 0.00 38.63 1.82
2620 3631 4.622260 AAAATGTAGCAAAAGGTGGCAT 57.378 36.364 0.00 0.00 0.00 4.40
2622 3633 4.631131 AGAAAAATGTAGCAAAAGGTGGC 58.369 39.130 0.00 0.00 0.00 5.01
2628 3639 5.528043 TGCTGGAGAAAAATGTAGCAAAA 57.472 34.783 0.00 0.00 38.12 2.44
2629 3640 5.528043 TTGCTGGAGAAAAATGTAGCAAA 57.472 34.783 6.96 0.00 45.00 3.68
2630 3641 4.584325 AGTTGCTGGAGAAAAATGTAGCAA 59.416 37.500 0.00 0.00 45.55 3.91
2631 3642 4.144297 AGTTGCTGGAGAAAAATGTAGCA 58.856 39.130 0.00 0.00 39.17 3.49
2632 3643 4.773323 AGTTGCTGGAGAAAAATGTAGC 57.227 40.909 0.00 0.00 0.00 3.58
2633 3644 7.383102 ACATAGTTGCTGGAGAAAAATGTAG 57.617 36.000 0.00 0.00 0.00 2.74
2634 3645 7.759489 AACATAGTTGCTGGAGAAAAATGTA 57.241 32.000 0.00 0.00 0.00 2.29
2635 3646 6.655078 AACATAGTTGCTGGAGAAAAATGT 57.345 33.333 0.00 0.00 0.00 2.71
2636 3647 8.299570 AGTTAACATAGTTGCTGGAGAAAAATG 58.700 33.333 8.61 0.00 0.00 2.32
2637 3648 8.409358 AGTTAACATAGTTGCTGGAGAAAAAT 57.591 30.769 8.61 0.00 0.00 1.82
2666 3677 8.629158 ACAATTACACAAATTTGTCTCAGCTTA 58.371 29.630 20.85 2.08 39.91 3.09
2673 3684 9.868277 TTCTGAAACAATTACACAAATTTGTCT 57.132 25.926 20.85 12.41 39.91 3.41
2714 3745 2.164219 CGTTCCCAATACTGCATTTGCT 59.836 45.455 3.94 0.00 42.66 3.91
2720 3751 1.948611 GCCTTCGTTCCCAATACTGCA 60.949 52.381 0.00 0.00 0.00 4.41
2765 3796 1.557269 CCAGGCCCTGCTCTACTGTT 61.557 60.000 4.81 0.00 0.00 3.16
2792 3823 0.319555 TTCCTGAGTTCCAAGTCGCG 60.320 55.000 0.00 0.00 0.00 5.87
2807 3838 4.906664 AGGTCATTAGATCTCAGCATTCCT 59.093 41.667 0.00 0.00 24.93 3.36
2832 3863 1.895131 GAAAGCTTTGATGGCCTCCAA 59.105 47.619 18.30 5.19 36.95 3.53
2930 3961 8.755977 TCTACCGTCTCATTTTATTCTTAGGTT 58.244 33.333 0.00 0.00 0.00 3.50
2974 4006 6.039605 CCCTTGTTTTCCAAATTGCAGAAATT 59.960 34.615 0.00 0.00 40.32 1.82
2977 4009 4.450053 CCCTTGTTTTCCAAATTGCAGAA 58.550 39.130 0.00 0.00 31.20 3.02
2998 4032 5.453567 ACAAGATACAACCAAAAAGAGCC 57.546 39.130 0.00 0.00 0.00 4.70
3055 4105 7.615365 TGGACATCAGTAATGCTAAGGAAATTT 59.385 33.333 0.00 0.00 39.12 1.82
3069 4119 9.241919 ACAACAAATCAATATGGACATCAGTAA 57.758 29.630 0.00 0.00 0.00 2.24
3090 4140 1.005805 AGGCATCCCAGCATAACAACA 59.994 47.619 0.00 0.00 35.83 3.33
3093 4143 0.625316 ACAGGCATCCCAGCATAACA 59.375 50.000 0.00 0.00 35.83 2.41
3100 4150 2.486191 GGTCAATCTACAGGCATCCCAG 60.486 54.545 0.00 0.00 0.00 4.45
3103 4153 3.498774 ATGGTCAATCTACAGGCATCC 57.501 47.619 0.00 0.00 0.00 3.51
3142 4199 0.979811 CAATTCTCTGCAAAAGCGCG 59.020 50.000 0.00 0.00 33.35 6.86
3179 4236 3.554731 CCTCAGATCATGTCAATCACACG 59.445 47.826 0.00 0.00 38.04 4.49
3191 4248 0.558220 TCCTCGGTCCCTCAGATCAT 59.442 55.000 0.00 0.00 0.00 2.45
3196 4253 0.977395 AACTTTCCTCGGTCCCTCAG 59.023 55.000 0.00 0.00 0.00 3.35
3205 4262 0.389166 AGCTCAGCGAACTTTCCTCG 60.389 55.000 0.00 0.00 39.33 4.63
3217 4274 3.319122 CCCAACCCAAATATAAGCTCAGC 59.681 47.826 0.00 0.00 0.00 4.26
3243 4449 2.608988 AGGCTCACTGGACCAGGG 60.609 66.667 25.34 22.17 36.00 4.45
3334 4546 1.670083 GGGTGGTGGTAGTGCGAAC 60.670 63.158 0.00 0.00 0.00 3.95
3348 4560 2.178580 ACATGGTAGCAAAATGGGGTG 58.821 47.619 0.00 0.00 0.00 4.61
3394 4609 9.862585 CTAAATTTGGCAAACTTAAAACACATC 57.137 29.630 16.00 0.00 0.00 3.06
3447 4663 3.569701 AGTAATGGCCAACAAAGTGTGAG 59.430 43.478 10.96 0.00 0.00 3.51
3460 4677 4.846779 TCAACACAAAAGAGTAATGGCC 57.153 40.909 0.00 0.00 0.00 5.36
3462 4679 7.065803 ACGGATATCAACACAAAAGAGTAATGG 59.934 37.037 4.83 0.00 0.00 3.16
3464 4681 8.450964 CAACGGATATCAACACAAAAGAGTAAT 58.549 33.333 4.83 0.00 0.00 1.89
3465 4682 7.658167 TCAACGGATATCAACACAAAAGAGTAA 59.342 33.333 4.83 0.00 0.00 2.24
3480 4697 8.627487 TTACAAATGCAATTTCAACGGATATC 57.373 30.769 0.00 0.00 44.81 1.63
3493 4710 9.701098 CCTGCTCAAATATATTACAAATGCAAT 57.299 29.630 0.00 0.00 0.00 3.56
3512 4729 2.513753 CAACCCACAAATACCTGCTCA 58.486 47.619 0.00 0.00 0.00 4.26
3513 4730 1.818674 CCAACCCACAAATACCTGCTC 59.181 52.381 0.00 0.00 0.00 4.26
3519 4736 8.048514 TCCTATTACTAACCAACCCACAAATAC 58.951 37.037 0.00 0.00 0.00 1.89
3601 4890 9.589461 TCATGGTATTAACCTAAACCAGAAAAA 57.411 29.630 0.00 0.00 46.91 1.94
3602 4891 9.589461 TTCATGGTATTAACCTAAACCAGAAAA 57.411 29.630 0.00 0.00 46.91 2.29
3630 4919 4.107622 GGAAATCGCCTGAACAATCATTG 58.892 43.478 0.00 0.00 34.37 2.82
3631 4920 4.019174 AGGAAATCGCCTGAACAATCATT 58.981 39.130 0.00 0.00 36.76 2.57
3637 4926 3.751175 CACTTAAGGAAATCGCCTGAACA 59.249 43.478 7.53 0.00 38.58 3.18
3638 4927 3.751698 ACACTTAAGGAAATCGCCTGAAC 59.248 43.478 7.53 0.00 38.58 3.18
3646 4935 6.650427 AAGAACCCAACACTTAAGGAAATC 57.350 37.500 7.53 0.00 0.00 2.17
3650 4939 6.424883 TGTTTAAGAACCCAACACTTAAGGA 58.575 36.000 7.53 0.00 37.39 3.36
3657 4946 4.036380 CCAGACTGTTTAAGAACCCAACAC 59.964 45.833 0.93 0.00 34.80 3.32
3667 4956 5.179555 GGAAGTGCTAACCAGACTGTTTAAG 59.820 44.000 0.93 0.00 0.00 1.85
3673 4962 1.347707 TGGGAAGTGCTAACCAGACTG 59.652 52.381 0.00 0.00 0.00 3.51
3674 4963 1.729586 TGGGAAGTGCTAACCAGACT 58.270 50.000 0.00 0.00 0.00 3.24
3675 4964 2.038557 TCTTGGGAAGTGCTAACCAGAC 59.961 50.000 0.00 0.00 33.96 3.51
3676 4965 2.038557 GTCTTGGGAAGTGCTAACCAGA 59.961 50.000 0.00 0.00 33.96 3.86
3677 4966 2.224523 TGTCTTGGGAAGTGCTAACCAG 60.225 50.000 0.00 0.00 33.96 4.00
3678 4967 1.771854 TGTCTTGGGAAGTGCTAACCA 59.228 47.619 0.00 0.00 0.00 3.67
3679 4968 2.038557 TCTGTCTTGGGAAGTGCTAACC 59.961 50.000 0.00 0.00 0.00 2.85
3680 4969 3.330267 CTCTGTCTTGGGAAGTGCTAAC 58.670 50.000 0.00 0.00 0.00 2.34
3681 4970 2.289694 GCTCTGTCTTGGGAAGTGCTAA 60.290 50.000 0.00 0.00 0.00 3.09
3682 4971 1.276421 GCTCTGTCTTGGGAAGTGCTA 59.724 52.381 0.00 0.00 0.00 3.49
3683 4972 0.036022 GCTCTGTCTTGGGAAGTGCT 59.964 55.000 0.00 0.00 0.00 4.40
3684 4973 0.036022 AGCTCTGTCTTGGGAAGTGC 59.964 55.000 0.00 0.00 0.00 4.40
3685 4974 1.345741 TGAGCTCTGTCTTGGGAAGTG 59.654 52.381 16.19 0.00 0.00 3.16
3686 4975 1.346068 GTGAGCTCTGTCTTGGGAAGT 59.654 52.381 16.19 0.00 0.00 3.01
3687 4976 1.622811 AGTGAGCTCTGTCTTGGGAAG 59.377 52.381 16.19 0.00 0.00 3.46
3688 4977 1.722034 AGTGAGCTCTGTCTTGGGAA 58.278 50.000 16.19 0.00 0.00 3.97
3689 4978 2.604912 TAGTGAGCTCTGTCTTGGGA 57.395 50.000 16.19 0.00 0.00 4.37
3690 4979 3.685139 TTTAGTGAGCTCTGTCTTGGG 57.315 47.619 16.19 0.00 0.00 4.12
3691 4980 6.348868 GGAAATTTTAGTGAGCTCTGTCTTGG 60.349 42.308 16.19 0.00 0.00 3.61
3692 4981 6.348868 GGGAAATTTTAGTGAGCTCTGTCTTG 60.349 42.308 16.19 0.00 0.00 3.02
3693 4982 5.707764 GGGAAATTTTAGTGAGCTCTGTCTT 59.292 40.000 16.19 0.00 0.00 3.01
3694 4983 5.013599 AGGGAAATTTTAGTGAGCTCTGTCT 59.986 40.000 16.19 12.66 0.00 3.41
3695 4984 5.249420 AGGGAAATTTTAGTGAGCTCTGTC 58.751 41.667 16.19 5.70 0.00 3.51
3696 4985 5.248380 AGGGAAATTTTAGTGAGCTCTGT 57.752 39.130 16.19 4.39 0.00 3.41
3697 4986 5.474876 ACAAGGGAAATTTTAGTGAGCTCTG 59.525 40.000 16.19 1.06 0.00 3.35
3698 4987 5.635120 ACAAGGGAAATTTTAGTGAGCTCT 58.365 37.500 16.19 0.00 0.00 4.09
3699 4988 5.966742 ACAAGGGAAATTTTAGTGAGCTC 57.033 39.130 6.82 6.82 0.00 4.09
3700 4989 7.505923 AGTTTACAAGGGAAATTTTAGTGAGCT 59.494 33.333 0.00 0.00 0.00 4.09
3701 4990 7.658261 AGTTTACAAGGGAAATTTTAGTGAGC 58.342 34.615 0.00 0.00 0.00 4.26
3702 4991 8.015658 CGAGTTTACAAGGGAAATTTTAGTGAG 58.984 37.037 0.00 0.00 0.00 3.51
3703 4992 7.040961 CCGAGTTTACAAGGGAAATTTTAGTGA 60.041 37.037 0.00 0.00 0.00 3.41
3704 4993 7.081976 CCGAGTTTACAAGGGAAATTTTAGTG 58.918 38.462 0.00 0.00 0.00 2.74
3705 4994 6.774170 ACCGAGTTTACAAGGGAAATTTTAGT 59.226 34.615 0.00 0.00 0.00 2.24
3706 4995 7.040961 TCACCGAGTTTACAAGGGAAATTTTAG 60.041 37.037 0.00 0.00 0.00 1.85
3707 4996 6.771749 TCACCGAGTTTACAAGGGAAATTTTA 59.228 34.615 0.00 0.00 0.00 1.52
3708 4997 5.595133 TCACCGAGTTTACAAGGGAAATTTT 59.405 36.000 0.00 0.00 0.00 1.82
3709 4998 5.134661 TCACCGAGTTTACAAGGGAAATTT 58.865 37.500 0.00 0.00 0.00 1.82
3710 4999 4.721132 TCACCGAGTTTACAAGGGAAATT 58.279 39.130 0.00 0.00 0.00 1.82
3711 5000 4.360951 TCACCGAGTTTACAAGGGAAAT 57.639 40.909 0.00 0.00 0.00 2.17
3712 5001 3.842007 TCACCGAGTTTACAAGGGAAA 57.158 42.857 0.00 0.00 0.00 3.13
3713 5002 4.622220 GCTATCACCGAGTTTACAAGGGAA 60.622 45.833 0.00 0.00 0.00 3.97
3714 5003 3.118884 GCTATCACCGAGTTTACAAGGGA 60.119 47.826 0.00 0.00 0.00 4.20
3715 5004 3.195661 GCTATCACCGAGTTTACAAGGG 58.804 50.000 0.00 0.00 0.00 3.95
3716 5005 3.118738 AGGCTATCACCGAGTTTACAAGG 60.119 47.826 0.00 0.00 33.69 3.61
3717 5006 3.865745 CAGGCTATCACCGAGTTTACAAG 59.134 47.826 0.00 0.00 33.69 3.16
3718 5007 3.369052 CCAGGCTATCACCGAGTTTACAA 60.369 47.826 0.00 0.00 33.69 2.41
3719 5008 2.167693 CCAGGCTATCACCGAGTTTACA 59.832 50.000 0.00 0.00 33.69 2.41
3720 5009 2.167900 ACCAGGCTATCACCGAGTTTAC 59.832 50.000 0.00 0.00 33.69 2.01
3721 5010 2.167693 CACCAGGCTATCACCGAGTTTA 59.832 50.000 0.00 0.00 33.69 2.01
3722 5011 1.066143 CACCAGGCTATCACCGAGTTT 60.066 52.381 0.00 0.00 33.69 2.66
3723 5012 0.537188 CACCAGGCTATCACCGAGTT 59.463 55.000 0.00 0.00 33.69 3.01
3724 5013 1.330655 CCACCAGGCTATCACCGAGT 61.331 60.000 0.00 0.00 33.69 4.18
3725 5014 1.330655 ACCACCAGGCTATCACCGAG 61.331 60.000 0.00 0.00 39.06 4.63
3726 5015 0.907704 AACCACCAGGCTATCACCGA 60.908 55.000 0.00 0.00 39.06 4.69
3727 5016 0.744414 CAACCACCAGGCTATCACCG 60.744 60.000 0.00 0.00 39.06 4.94
3728 5017 0.618458 TCAACCACCAGGCTATCACC 59.382 55.000 0.00 0.00 39.06 4.02
3729 5018 1.279271 AGTCAACCACCAGGCTATCAC 59.721 52.381 0.00 0.00 39.06 3.06
3730 5019 1.656587 AGTCAACCACCAGGCTATCA 58.343 50.000 0.00 0.00 39.06 2.15
3731 5020 2.027192 TCAAGTCAACCACCAGGCTATC 60.027 50.000 0.00 0.00 39.06 2.08
3732 5021 1.985159 TCAAGTCAACCACCAGGCTAT 59.015 47.619 0.00 0.00 39.06 2.97
3733 5022 1.429930 TCAAGTCAACCACCAGGCTA 58.570 50.000 0.00 0.00 39.06 3.93
3734 5023 0.550914 TTCAAGTCAACCACCAGGCT 59.449 50.000 0.00 0.00 39.06 4.58
3735 5024 0.668535 GTTCAAGTCAACCACCAGGC 59.331 55.000 0.00 0.00 39.06 4.85
3736 5025 2.051334 TGTTCAAGTCAACCACCAGG 57.949 50.000 0.00 0.00 42.21 4.45
3737 5026 2.223572 GCTTGTTCAAGTCAACCACCAG 60.224 50.000 13.04 0.00 0.00 4.00
3738 5027 1.748493 GCTTGTTCAAGTCAACCACCA 59.252 47.619 13.04 0.00 0.00 4.17
3739 5028 2.024414 AGCTTGTTCAAGTCAACCACC 58.976 47.619 13.04 0.00 0.00 4.61
3740 5029 3.128589 TGAAGCTTGTTCAAGTCAACCAC 59.871 43.478 2.10 0.00 0.00 4.16
3741 5030 3.351740 TGAAGCTTGTTCAAGTCAACCA 58.648 40.909 2.10 0.00 0.00 3.67
3742 5031 4.574599 ATGAAGCTTGTTCAAGTCAACC 57.425 40.909 2.10 0.00 31.55 3.77
3743 5032 5.581605 TGAATGAAGCTTGTTCAAGTCAAC 58.418 37.500 17.17 9.19 31.55 3.18
3744 5033 5.833406 TGAATGAAGCTTGTTCAAGTCAA 57.167 34.783 17.17 0.00 31.55 3.18
3745 5034 5.833406 TTGAATGAAGCTTGTTCAAGTCA 57.167 34.783 22.95 12.98 37.05 3.41
3746 5035 6.268566 ACTTTGAATGAAGCTTGTTCAAGTC 58.731 36.000 24.31 12.35 41.31 3.01
3747 5036 6.212888 ACTTTGAATGAAGCTTGTTCAAGT 57.787 33.333 24.31 21.63 41.31 3.16
3748 5037 6.976925 AGAACTTTGAATGAAGCTTGTTCAAG 59.023 34.615 24.31 21.23 41.31 3.02
3749 5038 6.866480 AGAACTTTGAATGAAGCTTGTTCAA 58.134 32.000 22.95 22.95 39.36 2.69
3750 5039 6.095300 TGAGAACTTTGAATGAAGCTTGTTCA 59.905 34.615 18.56 17.37 36.15 3.18
3751 5040 6.498304 TGAGAACTTTGAATGAAGCTTGTTC 58.502 36.000 2.10 8.78 34.55 3.18
3752 5041 6.455360 TGAGAACTTTGAATGAAGCTTGTT 57.545 33.333 2.10 0.00 0.00 2.83
3753 5042 6.294397 GGATGAGAACTTTGAATGAAGCTTGT 60.294 38.462 2.10 0.00 0.00 3.16
3754 5043 6.091437 GGATGAGAACTTTGAATGAAGCTTG 58.909 40.000 2.10 0.00 0.00 4.01
3755 5044 5.771666 TGGATGAGAACTTTGAATGAAGCTT 59.228 36.000 0.00 0.00 0.00 3.74
3756 5045 5.319453 TGGATGAGAACTTTGAATGAAGCT 58.681 37.500 0.00 0.00 0.00 3.74
3757 5046 5.633830 TGGATGAGAACTTTGAATGAAGC 57.366 39.130 0.00 0.00 0.00 3.86
3758 5047 8.396390 CAGTATGGATGAGAACTTTGAATGAAG 58.604 37.037 0.00 0.00 0.00 3.02
3759 5048 7.884877 ACAGTATGGATGAGAACTTTGAATGAA 59.115 33.333 0.00 0.00 43.62 2.57
3760 5049 7.335171 CACAGTATGGATGAGAACTTTGAATGA 59.665 37.037 0.00 0.00 43.62 2.57
3761 5050 7.470079 CACAGTATGGATGAGAACTTTGAATG 58.530 38.462 0.00 0.00 43.62 2.67
3762 5051 6.094603 GCACAGTATGGATGAGAACTTTGAAT 59.905 38.462 0.00 0.00 43.62 2.57
3763 5052 5.412594 GCACAGTATGGATGAGAACTTTGAA 59.587 40.000 0.00 0.00 43.62 2.69
3764 5053 4.937620 GCACAGTATGGATGAGAACTTTGA 59.062 41.667 0.00 0.00 43.62 2.69
3765 5054 4.940046 AGCACAGTATGGATGAGAACTTTG 59.060 41.667 0.00 0.00 43.62 2.77
3766 5055 5.171339 AGCACAGTATGGATGAGAACTTT 57.829 39.130 0.00 0.00 43.62 2.66
3767 5056 4.833478 AGCACAGTATGGATGAGAACTT 57.167 40.909 0.00 0.00 43.62 2.66
3768 5057 4.343526 CCTAGCACAGTATGGATGAGAACT 59.656 45.833 0.00 0.00 43.62 3.01
3769 5058 4.502259 CCCTAGCACAGTATGGATGAGAAC 60.502 50.000 0.00 0.00 43.62 3.01
3770 5059 3.643320 CCCTAGCACAGTATGGATGAGAA 59.357 47.826 0.00 0.00 43.62 2.87
3771 5060 3.117131 TCCCTAGCACAGTATGGATGAGA 60.117 47.826 0.00 0.00 43.62 3.27
3772 5061 3.234353 TCCCTAGCACAGTATGGATGAG 58.766 50.000 0.00 0.00 43.62 2.90
3773 5062 3.234353 CTCCCTAGCACAGTATGGATGA 58.766 50.000 0.00 0.00 43.62 2.92
3774 5063 3.674528 CTCCCTAGCACAGTATGGATG 57.325 52.381 0.00 0.00 43.62 3.51
3789 5078 4.890207 AGGGTTTACGAGCTCCCT 57.110 55.556 8.47 5.24 44.62 4.20
3790 5079 1.449778 GCAGGGTTTACGAGCTCCC 60.450 63.158 8.47 2.49 40.16 4.30
3791 5080 1.449778 GGCAGGGTTTACGAGCTCC 60.450 63.158 8.47 0.00 0.00 4.70
3792 5081 1.810030 CGGCAGGGTTTACGAGCTC 60.810 63.158 2.73 2.73 0.00 4.09
3793 5082 2.264794 CGGCAGGGTTTACGAGCT 59.735 61.111 0.00 0.00 0.00 4.09
3794 5083 2.818274 CCGGCAGGGTTTACGAGC 60.818 66.667 0.00 0.00 0.00 5.03
3795 5084 2.818274 GCCGGCAGGGTTTACGAG 60.818 66.667 24.80 0.00 38.44 4.18
3803 5092 4.181010 ATGTGCTAGCCGGCAGGG 62.181 66.667 31.54 18.60 43.25 4.45
3804 5093 2.898840 CATGTGCTAGCCGGCAGG 60.899 66.667 31.54 21.31 43.25 4.85
3805 5094 2.898840 CCATGTGCTAGCCGGCAG 60.899 66.667 31.54 23.68 43.25 4.85
3806 5095 2.762969 AAACCATGTGCTAGCCGGCA 62.763 55.000 31.54 14.00 40.15 5.69
3807 5096 1.595093 AAAACCATGTGCTAGCCGGC 61.595 55.000 21.89 21.89 0.00 6.13
3808 5097 0.887933 AAAAACCATGTGCTAGCCGG 59.112 50.000 13.29 10.00 0.00 6.13
3809 5098 4.104776 CAATAAAAACCATGTGCTAGCCG 58.895 43.478 13.29 0.00 0.00 5.52
3810 5099 5.072040 ACAATAAAAACCATGTGCTAGCC 57.928 39.130 13.29 4.15 0.00 3.93
3811 5100 7.061789 GTGTAACAATAAAAACCATGTGCTAGC 59.938 37.037 8.10 8.10 36.32 3.42
3812 5101 8.296713 AGTGTAACAATAAAAACCATGTGCTAG 58.703 33.333 0.00 0.00 41.43 3.42
3813 5102 8.079203 CAGTGTAACAATAAAAACCATGTGCTA 58.921 33.333 0.00 0.00 41.43 3.49
3814 5103 6.922957 CAGTGTAACAATAAAAACCATGTGCT 59.077 34.615 0.00 0.00 41.43 4.40
3815 5104 6.346518 GCAGTGTAACAATAAAAACCATGTGC 60.347 38.462 0.00 0.00 41.43 4.57
3816 5105 6.145371 GGCAGTGTAACAATAAAAACCATGTG 59.855 38.462 0.00 0.00 41.43 3.21
3817 5106 6.041523 AGGCAGTGTAACAATAAAAACCATGT 59.958 34.615 0.00 0.00 41.43 3.21
3818 5107 6.454795 AGGCAGTGTAACAATAAAAACCATG 58.545 36.000 0.00 0.00 41.43 3.66
3819 5108 6.664428 AGGCAGTGTAACAATAAAAACCAT 57.336 33.333 0.00 0.00 41.43 3.55
3820 5109 6.127310 ACAAGGCAGTGTAACAATAAAAACCA 60.127 34.615 0.00 0.00 41.43 3.67
3821 5110 6.277605 ACAAGGCAGTGTAACAATAAAAACC 58.722 36.000 0.00 0.00 41.43 3.27
3822 5111 8.132995 AGTACAAGGCAGTGTAACAATAAAAAC 58.867 33.333 0.00 0.00 41.43 2.43
3823 5112 8.228035 AGTACAAGGCAGTGTAACAATAAAAA 57.772 30.769 0.00 0.00 41.43 1.94
3824 5113 7.811117 AGTACAAGGCAGTGTAACAATAAAA 57.189 32.000 0.00 0.00 41.43 1.52
3825 5114 7.388500 GGTAGTACAAGGCAGTGTAACAATAAA 59.612 37.037 2.06 0.00 41.43 1.40
3826 5115 6.875195 GGTAGTACAAGGCAGTGTAACAATAA 59.125 38.462 2.06 0.00 41.43 1.40
3827 5116 6.211986 AGGTAGTACAAGGCAGTGTAACAATA 59.788 38.462 2.06 0.00 41.43 1.90
3828 5117 5.012768 AGGTAGTACAAGGCAGTGTAACAAT 59.987 40.000 2.06 0.00 41.43 2.71
3829 5118 4.345837 AGGTAGTACAAGGCAGTGTAACAA 59.654 41.667 2.06 0.00 41.43 2.83
3830 5119 3.899360 AGGTAGTACAAGGCAGTGTAACA 59.101 43.478 2.06 0.00 41.43 2.41
3831 5120 4.220163 AGAGGTAGTACAAGGCAGTGTAAC 59.780 45.833 2.06 0.18 35.79 2.50
3832 5121 4.219944 CAGAGGTAGTACAAGGCAGTGTAA 59.780 45.833 2.06 0.00 35.79 2.41
3833 5122 3.762288 CAGAGGTAGTACAAGGCAGTGTA 59.238 47.826 2.06 0.00 32.75 2.90
3834 5123 2.563179 CAGAGGTAGTACAAGGCAGTGT 59.437 50.000 2.06 0.00 35.43 3.55
3835 5124 2.563179 ACAGAGGTAGTACAAGGCAGTG 59.437 50.000 2.06 0.00 0.00 3.66
3836 5125 2.890814 ACAGAGGTAGTACAAGGCAGT 58.109 47.619 2.06 0.00 0.00 4.40
3837 5126 3.130693 GGTACAGAGGTAGTACAAGGCAG 59.869 52.174 2.06 0.00 42.73 4.85
3838 5127 3.094572 GGTACAGAGGTAGTACAAGGCA 58.905 50.000 2.06 0.00 42.73 4.75
3839 5128 3.094572 TGGTACAGAGGTAGTACAAGGC 58.905 50.000 2.06 0.00 42.73 4.35
3840 5129 5.733620 TTTGGTACAGAGGTAGTACAAGG 57.266 43.478 2.06 0.00 42.73 3.61
3841 5130 9.715121 TTATTTTTGGTACAGAGGTAGTACAAG 57.285 33.333 2.06 0.00 42.73 3.16
3842 5131 9.715121 CTTATTTTTGGTACAGAGGTAGTACAA 57.285 33.333 2.06 0.00 42.73 2.41
3843 5132 9.092338 TCTTATTTTTGGTACAGAGGTAGTACA 57.908 33.333 2.06 0.00 42.73 2.90
3844 5133 9.363763 GTCTTATTTTTGGTACAGAGGTAGTAC 57.636 37.037 0.00 0.00 42.39 2.73
3845 5134 9.092338 TGTCTTATTTTTGGTACAGAGGTAGTA 57.908 33.333 0.00 0.00 42.39 1.82
3846 5135 7.970102 TGTCTTATTTTTGGTACAGAGGTAGT 58.030 34.615 0.00 0.00 42.39 2.73
3847 5136 9.449719 AATGTCTTATTTTTGGTACAGAGGTAG 57.550 33.333 0.00 0.00 42.39 3.18
3848 5137 9.802039 AAATGTCTTATTTTTGGTACAGAGGTA 57.198 29.630 0.00 0.00 42.39 3.08
3849 5138 8.706322 AAATGTCTTATTTTTGGTACAGAGGT 57.294 30.769 0.00 0.00 42.39 3.85
3850 5139 9.981114 AAAAATGTCTTATTTTTGGTACAGAGG 57.019 29.630 8.94 0.00 42.39 3.69
3860 5149 8.436046 TTGAGCTGCAAAAATGTCTTATTTTT 57.564 26.923 1.02 4.92 40.58 1.94
3861 5150 8.611654 ATTGAGCTGCAAAAATGTCTTATTTT 57.388 26.923 1.02 0.00 40.48 1.82
3862 5151 8.611654 AATTGAGCTGCAAAAATGTCTTATTT 57.388 26.923 1.02 0.00 40.48 1.40
3863 5152 8.611654 AAATTGAGCTGCAAAAATGTCTTATT 57.388 26.923 1.02 0.00 40.48 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.