Multiple sequence alignment - TraesCS3D01G423700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G423700 chr3D 100.000 4563 0 0 1 4563 536140775 536145337 0.000000e+00 8427.0
1 TraesCS3D01G423700 chr3D 77.646 756 140 23 2683 3431 536164230 536164963 2.520000e-117 433.0
2 TraesCS3D01G423700 chr3D 88.462 234 27 0 4330 4563 427228927 427229160 2.690000e-72 283.0
3 TraesCS3D01G423700 chr3D 78.333 360 67 9 2685 3041 536244007 536244358 5.940000e-54 222.0
4 TraesCS3D01G423700 chr3D 78.198 344 65 8 2683 3024 535650887 535650552 1.290000e-50 211.0
5 TraesCS3D01G423700 chr3D 77.626 219 45 3 2685 2901 535644715 535644499 3.700000e-26 130.0
6 TraesCS3D01G423700 chr3B 90.876 2477 169 28 1 2439 708364918 708362461 0.000000e+00 3269.0
7 TraesCS3D01G423700 chr3B 95.068 1176 47 6 2426 3591 708362443 708361269 0.000000e+00 1840.0
8 TraesCS3D01G423700 chr3B 77.586 754 144 17 2683 3431 708311127 708310394 2.520000e-117 433.0
9 TraesCS3D01G423700 chr3B 88.365 318 24 7 3856 4165 789761116 789760804 2.010000e-98 370.0
10 TraesCS3D01G423700 chr3B 77.616 344 67 8 2683 3024 707128667 707128332 2.780000e-47 200.0
11 TraesCS3D01G423700 chr3B 90.435 115 7 3 3750 3864 691264144 691264034 1.020000e-31 148.0
12 TraesCS3D01G423700 chr3B 90.741 108 10 0 3627 3734 691264338 691264231 1.320000e-30 145.0
13 TraesCS3D01G423700 chr3A 90.108 1941 133 25 1 1900 671680646 671678724 0.000000e+00 2466.0
14 TraesCS3D01G423700 chr3A 93.887 1096 41 9 2521 3592 671678729 671677636 0.000000e+00 1629.0
15 TraesCS3D01G423700 chr3A 77.968 758 137 23 2683 3431 671661127 671660391 9.000000e-122 448.0
16 TraesCS3D01G423700 chr3A 83.533 334 25 12 2226 2548 671660214 671659900 7.470000e-73 285.0
17 TraesCS3D01G423700 chr3A 91.710 193 15 1 2652 2844 671659873 671659682 2.710000e-67 267.0
18 TraesCS3D01G423700 chr3A 78.846 364 62 13 2683 3041 671722974 671723327 9.870000e-57 231.0
19 TraesCS3D01G423700 chr3A 77.035 344 69 8 2683 3024 670834572 670834237 6.030000e-44 189.0
20 TraesCS3D01G423700 chr1D 83.295 880 128 5 2683 3557 419999923 419999058 0.000000e+00 793.0
21 TraesCS3D01G423700 chr1D 90.031 321 30 2 3847 4165 97225754 97226074 9.130000e-112 414.0
22 TraesCS3D01G423700 chr1D 89.030 237 25 1 4327 4563 433297301 433297536 4.470000e-75 292.0
23 TraesCS3D01G423700 chr1D 94.444 162 8 1 4165 4326 97226123 97226283 9.800000e-62 248.0
24 TraesCS3D01G423700 chr1D 95.455 132 5 1 4195 4326 97226844 97226974 4.630000e-50 209.0
25 TraesCS3D01G423700 chr1D 84.404 109 17 0 3627 3735 99410858 99410750 1.740000e-19 108.0
26 TraesCS3D01G423700 chr1B 84.133 813 122 4 2683 3490 566983427 566982617 0.000000e+00 780.0
27 TraesCS3D01G423700 chr1B 83.486 109 17 1 3627 3735 152954035 152954142 2.900000e-17 100.0
28 TraesCS3D01G423700 chr1B 95.455 44 2 0 3514 3557 566982614 566982571 2.280000e-08 71.3
29 TraesCS3D01G423700 chr4A 91.022 323 26 3 3843 4165 737441156 737440837 2.520000e-117 433.0
30 TraesCS3D01G423700 chr4A 87.660 235 26 3 4330 4563 578388709 578388941 2.090000e-68 270.0
31 TraesCS3D01G423700 chr4A 73.529 476 110 13 2706 3173 621188845 621189312 2.820000e-37 167.0
32 TraesCS3D01G423700 chr4D 93.208 265 17 1 3857 4121 362756033 362756296 5.540000e-104 388.0
33 TraesCS3D01G423700 chr4D 89.496 238 23 2 4327 4563 396622110 396622346 2.670000e-77 300.0
34 TraesCS3D01G423700 chr4D 95.783 166 7 0 4165 4330 362756369 362756534 7.520000e-68 268.0
35 TraesCS3D01G423700 chr4D 88.889 108 10 2 3629 3735 429121574 429121680 1.030000e-26 132.0
36 TraesCS3D01G423700 chr5D 92.208 231 15 3 4333 4562 482289562 482289790 1.580000e-84 324.0
37 TraesCS3D01G423700 chr5D 88.696 230 25 1 4330 4558 44159624 44159853 3.480000e-71 279.0
38 TraesCS3D01G423700 chr5D 72.746 477 114 13 2705 3173 549656776 549656308 3.680000e-31 147.0
39 TraesCS3D01G423700 chr5D 79.070 215 41 2 2961 3173 549647938 549648150 1.320000e-30 145.0
40 TraesCS3D01G423700 chr2D 90.213 235 22 1 4330 4563 627586102 627585868 5.740000e-79 305.0
41 TraesCS3D01G423700 chr2D 88.889 108 10 2 3629 3735 648453019 648453125 1.030000e-26 132.0
42 TraesCS3D01G423700 chr7D 89.787 235 22 2 4330 4563 71621354 71621121 2.670000e-77 300.0
43 TraesCS3D01G423700 chr7D 90.654 107 10 0 3627 3733 175642857 175642963 4.760000e-30 143.0
44 TraesCS3D01G423700 chr7D 87.255 102 13 0 3627 3728 539482158 539482057 2.880000e-22 117.0
45 TraesCS3D01G423700 chr7D 86.408 103 14 0 3627 3729 561548484 561548586 3.730000e-21 113.0
46 TraesCS3D01G423700 chr6D 87.983 233 28 0 4331 4563 94749826 94749594 4.500000e-70 276.0
47 TraesCS3D01G423700 chr5B 73.573 473 109 13 2709 3173 701196314 701195850 2.820000e-37 167.0
48 TraesCS3D01G423700 chr5B 84.404 109 14 3 3749 3857 702128977 702129082 2.250000e-18 104.0
49 TraesCS3D01G423700 chr5B 83.486 109 15 3 3749 3857 702140732 702140837 1.040000e-16 99.0
50 TraesCS3D01G423700 chr5B 83.486 109 14 4 3749 3857 702181261 702181365 1.040000e-16 99.0
51 TraesCS3D01G423700 chr5B 93.023 43 2 1 3845 3887 119134653 119134612 1.370000e-05 62.1
52 TraesCS3D01G423700 chr2B 92.523 107 5 3 3752 3857 267467824 267467720 2.840000e-32 150.0
53 TraesCS3D01G423700 chr2B 86.290 124 14 2 3736 3859 182718659 182718779 1.030000e-26 132.0
54 TraesCS3D01G423700 chr7B 85.385 130 17 2 4201 4328 449503004 449502875 2.860000e-27 134.0
55 TraesCS3D01G423700 chr7B 95.161 62 3 0 3855 3916 449503496 449503435 1.040000e-16 99.0
56 TraesCS3D01G423700 chr7B 90.000 50 3 2 3846 3893 65349481 65349432 3.810000e-06 63.9
57 TraesCS3D01G423700 chr7B 100.000 32 0 0 3597 3628 18941482 18941513 4.930000e-05 60.2
58 TraesCS3D01G423700 chr1A 83.486 109 18 0 3627 3735 92612926 92613034 8.080000e-18 102.0
59 TraesCS3D01G423700 chrUn 83.486 109 15 3 3749 3857 247037194 247037299 1.040000e-16 99.0
60 TraesCS3D01G423700 chrUn 83.486 109 15 3 3749 3857 247046321 247046426 1.040000e-16 99.0
61 TraesCS3D01G423700 chrUn 83.486 109 15 3 3749 3857 377129106 377129211 1.040000e-16 99.0
62 TraesCS3D01G423700 chr6B 97.368 38 0 1 3857 3894 603331792 603331756 3.810000e-06 63.9
63 TraesCS3D01G423700 chr6B 97.368 38 0 1 3857 3894 694489319 694489283 3.810000e-06 63.9
64 TraesCS3D01G423700 chr6B 92.857 42 1 2 3845 3886 691754885 691754846 4.930000e-05 60.2
65 TraesCS3D01G423700 chr7A 100.000 29 0 0 3600 3628 15746601 15746573 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G423700 chr3D 536140775 536145337 4562 False 8427.000000 8427 100.000000 1 4563 1 chr3D.!!$F2 4562
1 TraesCS3D01G423700 chr3D 536164230 536164963 733 False 433.000000 433 77.646000 2683 3431 1 chr3D.!!$F3 748
2 TraesCS3D01G423700 chr3B 708361269 708364918 3649 True 2554.500000 3269 92.972000 1 3591 2 chr3B.!!$R5 3590
3 TraesCS3D01G423700 chr3B 708310394 708311127 733 True 433.000000 433 77.586000 2683 3431 1 chr3B.!!$R2 748
4 TraesCS3D01G423700 chr3A 671677636 671680646 3010 True 2047.500000 2466 91.997500 1 3592 2 chr3A.!!$R3 3591
5 TraesCS3D01G423700 chr3A 671659682 671661127 1445 True 333.333333 448 84.403667 2226 3431 3 chr3A.!!$R2 1205
6 TraesCS3D01G423700 chr1D 419999058 419999923 865 True 793.000000 793 83.295000 2683 3557 1 chr1D.!!$R2 874
7 TraesCS3D01G423700 chr1D 97225754 97226974 1220 False 290.333333 414 93.310000 3847 4326 3 chr1D.!!$F2 479
8 TraesCS3D01G423700 chr1B 566982571 566983427 856 True 425.650000 780 89.794000 2683 3557 2 chr1B.!!$R1 874
9 TraesCS3D01G423700 chr4D 362756033 362756534 501 False 328.000000 388 94.495500 3857 4330 2 chr4D.!!$F3 473

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
476 478 0.178876 TCACCCCTCACCCATCTTCA 60.179 55.0 0.00 0.0 0.00 3.02 F
1451 1464 1.089920 TACTCGCGGGTAGTCAAGTC 58.910 55.0 16.43 0.0 0.00 3.01 F
1862 1907 0.040067 GAAACGCAGGGAAGCTGTTG 60.040 55.0 0.00 0.0 33.76 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1841 1886 0.179018 ACAGCTTCCCTGCGTTTCTT 60.179 50.000 0.00 0.00 45.78 2.52 R
2328 2374 1.347707 TGATTCCGTTGAGGCAAGTCT 59.652 47.619 0.00 0.00 40.77 3.24 R
3596 3705 0.176219 ATTCCCGTTGCAATGCATGG 59.824 50.000 9.39 14.18 38.76 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 53 2.280797 GGGCTTGCGATGGCGATA 60.281 61.111 0.00 0.00 44.10 2.92
109 111 2.812011 GGTACTTTCATCAAGTTGCGGT 59.188 45.455 0.00 0.00 43.89 5.68
138 140 4.486529 ACCTCCCTTTCTATCCTCTTCCTA 59.513 45.833 0.00 0.00 0.00 2.94
153 155 5.163258 CCTCTTCCTATTAGTGCTCACCAAT 60.163 44.000 0.00 0.00 0.00 3.16
183 185 2.539476 TCACCGATTGACATGATGACG 58.461 47.619 0.00 0.00 0.00 4.35
320 322 4.097741 TCAAAATCTGGTGATTATTGCCGG 59.902 41.667 0.00 0.00 41.62 6.13
423 425 3.845781 ATTGTTGAGCATCGAGGGTAT 57.154 42.857 0.01 0.00 38.61 2.73
436 438 0.919289 AGGGTATGGGTTGGTGGAGG 60.919 60.000 0.00 0.00 0.00 4.30
476 478 0.178876 TCACCCCTCACCCATCTTCA 60.179 55.000 0.00 0.00 0.00 3.02
503 507 2.436964 TTTTGGTACCCCCACCTCTA 57.563 50.000 10.07 0.00 45.19 2.43
546 550 7.862274 TGGACATTCAGATCCAATATCTACT 57.138 36.000 0.00 0.00 42.14 2.57
590 594 9.979578 TTGTTGTTTATCATGCATATATTTCCC 57.020 29.630 0.00 0.00 0.00 3.97
608 612 1.271001 CCCATCAGTCAGCAACTCACA 60.271 52.381 0.00 0.00 35.45 3.58
639 645 4.858140 TCTAATTGATTTGTGCGTGCATTG 59.142 37.500 0.00 0.00 0.00 2.82
671 677 8.938801 TTTTGCATCACCCATACATTATAGAT 57.061 30.769 0.00 0.00 0.00 1.98
672 678 8.938801 TTTGCATCACCCATACATTATAGATT 57.061 30.769 0.00 0.00 0.00 2.40
788 794 1.959226 TCTCCGCCGCTTTGTGAAC 60.959 57.895 0.00 0.00 0.00 3.18
816 822 3.969287 TTGAAGACACCCTCAGATCTG 57.031 47.619 17.07 17.07 0.00 2.90
946 958 8.918202 TCACTACCATAATGTCATTAATTCCC 57.082 34.615 9.31 0.00 0.00 3.97
948 960 7.659799 CACTACCATAATGTCATTAATTCCCGA 59.340 37.037 9.31 0.00 0.00 5.14
949 961 8.383175 ACTACCATAATGTCATTAATTCCCGAT 58.617 33.333 9.31 0.00 0.00 4.18
958 970 7.450074 TGTCATTAATTCCCGATAGCATTAGT 58.550 34.615 0.00 0.00 0.00 2.24
981 993 3.243468 TGCATGCCAATTAATCATGGACG 60.243 43.478 16.68 0.00 39.12 4.79
992 1004 7.630242 ATTAATCATGGACGCCCTATAAATG 57.370 36.000 0.00 0.00 0.00 2.32
995 1007 2.254546 TGGACGCCCTATAAATGCAG 57.745 50.000 0.00 0.00 0.00 4.41
1021 1033 5.396213 GCAATGGAAGTAGATCTCTCCAACT 60.396 44.000 19.59 7.14 37.12 3.16
1045 1057 8.030106 ACTCGGTAAAGTTCATTTTTGTTTTGA 58.970 29.630 0.00 0.00 32.01 2.69
1116 1128 6.266558 AGTTTTGGATTGCAACCACTATAACA 59.733 34.615 17.04 2.48 37.13 2.41
1126 1138 7.097192 TGCAACCACTATAACACTCTTTCTAG 58.903 38.462 0.00 0.00 0.00 2.43
1207 1219 5.216648 GGCGAGCAACAAAACAAAATAGTA 58.783 37.500 0.00 0.00 0.00 1.82
1250 1262 2.462456 TCATTGTGCTGGTCTCACTC 57.538 50.000 0.00 0.00 35.58 3.51
1294 1306 8.065473 TGTTTCCATATGATGTGTAGCATTTT 57.935 30.769 3.65 0.00 38.06 1.82
1362 1374 7.786178 TCCCATATATTCTCACTTTGTTTCG 57.214 36.000 0.00 0.00 0.00 3.46
1371 1383 6.971527 TCTCACTTTGTTTCGTTGTTTCTA 57.028 33.333 0.00 0.00 0.00 2.10
1375 1387 7.586747 TCACTTTGTTTCGTTGTTTCTAGTTT 58.413 30.769 0.00 0.00 0.00 2.66
1387 1399 7.652507 CGTTGTTTCTAGTTTAGATAGATCCCC 59.347 40.741 0.00 0.00 34.22 4.81
1411 1423 8.621286 CCCTGTATTACATGGTGTATTTCTTTC 58.379 37.037 9.34 0.00 32.20 2.62
1451 1464 1.089920 TACTCGCGGGTAGTCAAGTC 58.910 55.000 16.43 0.00 0.00 3.01
1475 1488 2.938354 GCATCGGGCATATTGAGCT 58.062 52.632 0.00 0.00 43.97 4.09
1547 1563 8.237267 CACTTTAAGTAGGCTTGTTCATTTAGG 58.763 37.037 0.00 0.00 36.22 2.69
1556 1599 4.767409 GCTTGTTCATTTAGGTCCCTTTCT 59.233 41.667 0.00 0.00 0.00 2.52
1601 1644 7.228590 ACACAAACCTTTAGGCTAATTAGACA 58.771 34.615 20.52 3.88 39.32 3.41
1639 1682 8.095452 TGGCTAAGATCTAAGAAATTCTTCCT 57.905 34.615 11.97 3.25 37.89 3.36
1676 1721 7.907214 TCTAAGAAGTTCTTGGTAGATTTGC 57.093 36.000 25.27 0.00 37.29 3.68
1685 1730 7.121315 AGTTCTTGGTAGATTTGCCATTAACTC 59.879 37.037 12.11 0.00 38.68 3.01
1756 1801 6.430451 GGTCTCAAAATTATTAGGATGTGCG 58.570 40.000 0.00 0.00 0.00 5.34
1848 1893 8.624701 ATCAATTCATGATTTAGCAAGAAACG 57.375 30.769 0.00 0.00 46.85 3.60
1853 1898 2.487762 TGATTTAGCAAGAAACGCAGGG 59.512 45.455 0.00 0.00 0.00 4.45
1861 1906 0.179018 AGAAACGCAGGGAAGCTGTT 60.179 50.000 0.00 0.00 34.48 3.16
1862 1907 0.040067 GAAACGCAGGGAAGCTGTTG 60.040 55.000 0.00 0.00 33.76 3.33
1867 1912 2.027561 ACGCAGGGAAGCTGTTGTAATA 60.028 45.455 0.00 0.00 0.00 0.98
1900 1945 6.672266 TCAGTACTCCTCCATCCAAATATC 57.328 41.667 0.00 0.00 0.00 1.63
1915 1960 5.105064 TCCAAATATCTAGGGCCTAATACGC 60.105 44.000 15.43 0.00 0.00 4.42
1918 1963 5.855740 ATATCTAGGGCCTAATACGCTTC 57.144 43.478 15.43 0.00 0.00 3.86
1921 1966 2.912690 AGGGCCTAATACGCTTCTTC 57.087 50.000 2.82 0.00 0.00 2.87
1947 1992 4.511826 GTCACCTCTGACCACAAGTTAAAG 59.488 45.833 0.00 0.00 41.06 1.85
1976 2021 6.367686 ACATATGACATGCATGTTACACAG 57.632 37.500 31.82 21.27 41.95 3.66
1979 2024 4.270245 TGACATGCATGTTACACAGAGA 57.730 40.909 31.82 6.58 41.95 3.10
1985 2030 6.261603 ACATGCATGTTACACAGAGAATATGG 59.738 38.462 26.61 0.00 37.90 2.74
1994 2039 6.851222 ACACAGAGAATATGGCTAAATTCG 57.149 37.500 0.00 0.00 37.22 3.34
1999 2044 8.150945 ACAGAGAATATGGCTAAATTCGTATGT 58.849 33.333 0.00 0.00 37.22 2.29
2004 2049 9.944663 GAATATGGCTAAATTCGTATGTGAAAA 57.055 29.630 0.00 0.00 0.00 2.29
2079 2124 4.895668 ATCAATGGTCAAATGCAACCTT 57.104 36.364 6.83 0.00 36.47 3.50
2120 2165 7.037297 ACCCTATATATTTGGATGAAGGGAGTG 60.037 40.741 16.59 0.00 44.39 3.51
2154 2199 1.792057 CACCACGAATTTGCGCGTC 60.792 57.895 8.43 0.00 38.92 5.19
2155 2200 2.570581 CCACGAATTTGCGCGTCG 60.571 61.111 17.43 17.43 38.92 5.12
2181 2226 9.326339 GTAACGAAAGGAAGATTGACATTTTAC 57.674 33.333 0.00 0.00 0.00 2.01
2182 2227 7.745620 ACGAAAGGAAGATTGACATTTTACT 57.254 32.000 0.00 0.00 0.00 2.24
2183 2228 8.166422 ACGAAAGGAAGATTGACATTTTACTT 57.834 30.769 0.00 0.00 30.38 2.24
2184 2229 9.280174 ACGAAAGGAAGATTGACATTTTACTTA 57.720 29.630 0.00 0.00 28.22 2.24
2185 2230 9.760660 CGAAAGGAAGATTGACATTTTACTTAG 57.239 33.333 0.00 0.00 28.22 2.18
2190 2235 8.951243 GGAAGATTGACATTTTACTTAGAAGCT 58.049 33.333 0.00 0.00 0.00 3.74
2191 2236 9.766277 GAAGATTGACATTTTACTTAGAAGCTG 57.234 33.333 0.00 0.00 0.00 4.24
2192 2237 9.507329 AAGATTGACATTTTACTTAGAAGCTGA 57.493 29.630 0.00 0.00 0.00 4.26
2193 2238 8.940952 AGATTGACATTTTACTTAGAAGCTGAC 58.059 33.333 0.00 0.00 0.00 3.51
2194 2239 7.435068 TTGACATTTTACTTAGAAGCTGACC 57.565 36.000 0.00 0.00 0.00 4.02
2195 2240 6.530120 TGACATTTTACTTAGAAGCTGACCA 58.470 36.000 0.00 0.00 0.00 4.02
2224 2269 3.994392 ACGAGACAAAATGTAGCACGATT 59.006 39.130 0.00 0.00 0.00 3.34
2229 2274 7.167635 CGAGACAAAATGTAGCACGATTAGTAT 59.832 37.037 0.00 0.00 0.00 2.12
2233 2278 6.918892 AAATGTAGCACGATTAGTATTGCA 57.081 33.333 0.00 0.00 37.44 4.08
2253 2298 2.932614 CAAATCAGCCCTGTAACTCTCG 59.067 50.000 0.00 0.00 0.00 4.04
2293 2338 8.620116 AAATCGATCAAAATTTTGTGGGATTT 57.380 26.923 28.36 28.36 39.18 2.17
2360 2406 6.249035 TCAACGGAATCAGAAACAATAACC 57.751 37.500 0.00 0.00 0.00 2.85
2374 2420 6.585695 AACAATAACCGAGTAGAGTGAAGA 57.414 37.500 0.00 0.00 0.00 2.87
2389 2435 9.871238 GTAGAGTGAAGAAGGAATACAACATTA 57.129 33.333 0.00 0.00 0.00 1.90
2402 2448 8.448615 GGAATACAACATTAACTAGTGACCAAC 58.551 37.037 0.00 0.00 0.00 3.77
2462 2539 8.368126 CACATAAAATCTTTGAAATGCTTCGAC 58.632 33.333 0.00 0.00 33.94 4.20
2474 2551 7.243487 TGAAATGCTTCGACAATATTTGAGTC 58.757 34.615 0.00 0.00 33.94 3.36
2478 2555 7.290857 TGCTTCGACAATATTTGAGTCTAAC 57.709 36.000 0.00 0.00 0.00 2.34
2479 2556 6.034577 TGCTTCGACAATATTTGAGTCTAACG 59.965 38.462 0.00 0.00 0.00 3.18
2555 2635 8.895845 CAGCGTTAAATGTTCAATATTCATAGC 58.104 33.333 0.00 0.00 0.00 2.97
2556 2636 8.076178 AGCGTTAAATGTTCAATATTCATAGCC 58.924 33.333 0.00 0.00 0.00 3.93
2557 2637 7.326063 GCGTTAAATGTTCAATATTCATAGCCC 59.674 37.037 0.00 0.00 0.00 5.19
2558 2638 8.567948 CGTTAAATGTTCAATATTCATAGCCCT 58.432 33.333 0.00 0.00 0.00 5.19
2565 2653 8.367911 TGTTCAATATTCATAGCCCTACTGTAG 58.632 37.037 7.87 7.87 0.00 2.74
2837 2936 0.671781 CTTCCTCAACCACCTGCTCG 60.672 60.000 0.00 0.00 0.00 5.03
3118 3221 2.081212 GTCCTGCGACGTGTTCTCG 61.081 63.158 0.00 0.00 0.00 4.04
3570 3679 0.753262 AAGAGGCCATAGTAGCACGG 59.247 55.000 5.01 0.00 0.00 4.94
3582 3691 4.287766 AGTAGCACGGGAAGAAGAAAAT 57.712 40.909 0.00 0.00 0.00 1.82
3584 3693 5.070685 AGTAGCACGGGAAGAAGAAAATTT 58.929 37.500 0.00 0.00 0.00 1.82
3587 3696 6.399639 AGCACGGGAAGAAGAAAATTTAAA 57.600 33.333 0.00 0.00 0.00 1.52
3588 3697 6.447162 AGCACGGGAAGAAGAAAATTTAAAG 58.553 36.000 0.00 0.00 0.00 1.85
3589 3698 5.118664 GCACGGGAAGAAGAAAATTTAAAGC 59.881 40.000 0.00 0.00 0.00 3.51
3590 3699 6.447162 CACGGGAAGAAGAAAATTTAAAGCT 58.553 36.000 0.00 0.00 0.00 3.74
3591 3700 7.590279 CACGGGAAGAAGAAAATTTAAAGCTA 58.410 34.615 0.00 0.00 0.00 3.32
3592 3701 8.079809 CACGGGAAGAAGAAAATTTAAAGCTAA 58.920 33.333 0.00 0.00 0.00 3.09
3593 3702 8.297426 ACGGGAAGAAGAAAATTTAAAGCTAAG 58.703 33.333 0.00 0.00 0.00 2.18
3594 3703 7.755373 CGGGAAGAAGAAAATTTAAAGCTAAGG 59.245 37.037 0.00 0.00 0.00 2.69
3595 3704 8.585881 GGGAAGAAGAAAATTTAAAGCTAAGGT 58.414 33.333 0.00 0.00 0.00 3.50
3596 3705 9.627395 GGAAGAAGAAAATTTAAAGCTAAGGTC 57.373 33.333 0.00 0.00 0.00 3.85
3597 3706 9.627395 GAAGAAGAAAATTTAAAGCTAAGGTCC 57.373 33.333 0.00 0.00 0.00 4.46
3598 3707 8.706322 AGAAGAAAATTTAAAGCTAAGGTCCA 57.294 30.769 0.00 0.00 0.00 4.02
3599 3708 9.314133 AGAAGAAAATTTAAAGCTAAGGTCCAT 57.686 29.630 0.00 0.00 0.00 3.41
3600 3709 9.358872 GAAGAAAATTTAAAGCTAAGGTCCATG 57.641 33.333 0.00 0.00 0.00 3.66
3601 3710 7.323420 AGAAAATTTAAAGCTAAGGTCCATGC 58.677 34.615 0.00 0.00 0.00 4.06
3602 3711 6.603940 AAATTTAAAGCTAAGGTCCATGCA 57.396 33.333 0.00 0.00 0.00 3.96
3603 3712 6.796785 AATTTAAAGCTAAGGTCCATGCAT 57.203 33.333 0.00 0.00 0.00 3.96
3604 3713 6.796785 ATTTAAAGCTAAGGTCCATGCATT 57.203 33.333 0.00 0.00 0.00 3.56
3605 3714 5.581126 TTAAAGCTAAGGTCCATGCATTG 57.419 39.130 0.00 0.00 0.00 2.82
3606 3715 1.396653 AGCTAAGGTCCATGCATTGC 58.603 50.000 0.00 0.46 0.00 3.56
3607 3716 1.105457 GCTAAGGTCCATGCATTGCA 58.895 50.000 14.72 14.72 44.86 4.08
3608 3717 1.477700 GCTAAGGTCCATGCATTGCAA 59.522 47.619 16.46 0.00 43.62 4.08
3609 3718 2.736400 GCTAAGGTCCATGCATTGCAAC 60.736 50.000 16.46 9.36 43.62 4.17
3610 3719 0.244450 AAGGTCCATGCATTGCAACG 59.756 50.000 16.46 9.78 43.62 4.10
3611 3720 1.153784 GGTCCATGCATTGCAACGG 60.154 57.895 16.46 18.26 43.62 4.44
3612 3721 1.153784 GTCCATGCATTGCAACGGG 60.154 57.895 23.07 19.98 43.62 5.28
3613 3722 1.303970 TCCATGCATTGCAACGGGA 60.304 52.632 23.07 21.48 43.62 5.14
3614 3723 0.897401 TCCATGCATTGCAACGGGAA 60.897 50.000 23.07 8.52 43.62 3.97
3615 3724 0.176219 CCATGCATTGCAACGGGAAT 59.824 50.000 16.46 0.00 43.62 3.01
3616 3725 1.408340 CCATGCATTGCAACGGGAATA 59.592 47.619 16.46 0.00 43.62 1.75
3617 3726 2.036217 CCATGCATTGCAACGGGAATAT 59.964 45.455 16.46 0.00 43.62 1.28
3618 3727 3.255395 CCATGCATTGCAACGGGAATATA 59.745 43.478 16.46 0.00 43.62 0.86
3619 3728 4.261952 CCATGCATTGCAACGGGAATATAA 60.262 41.667 16.46 0.00 43.62 0.98
3620 3729 4.991153 TGCATTGCAACGGGAATATAAA 57.009 36.364 9.33 0.00 34.76 1.40
3621 3730 4.677584 TGCATTGCAACGGGAATATAAAC 58.322 39.130 9.33 0.00 34.76 2.01
3622 3731 4.158579 TGCATTGCAACGGGAATATAAACA 59.841 37.500 9.33 0.00 34.76 2.83
3623 3732 5.163468 TGCATTGCAACGGGAATATAAACAT 60.163 36.000 9.33 0.00 34.76 2.71
3624 3733 5.752955 GCATTGCAACGGGAATATAAACATT 59.247 36.000 0.00 0.00 32.81 2.71
3625 3734 6.074356 GCATTGCAACGGGAATATAAACATTC 60.074 38.462 0.00 0.00 32.81 2.67
3626 3735 6.767524 TTGCAACGGGAATATAAACATTCT 57.232 33.333 0.00 0.00 35.61 2.40
3627 3736 7.867305 TTGCAACGGGAATATAAACATTCTA 57.133 32.000 0.00 0.00 35.61 2.10
3628 3737 7.254227 TGCAACGGGAATATAAACATTCTAC 57.746 36.000 0.00 0.00 35.61 2.59
3629 3738 6.824196 TGCAACGGGAATATAAACATTCTACA 59.176 34.615 0.00 0.00 35.61 2.74
3630 3739 7.500892 TGCAACGGGAATATAAACATTCTACAT 59.499 33.333 0.00 0.00 35.61 2.29
3631 3740 8.349983 GCAACGGGAATATAAACATTCTACATT 58.650 33.333 0.00 0.00 35.61 2.71
3632 3741 9.663904 CAACGGGAATATAAACATTCTACATTG 57.336 33.333 0.00 0.00 35.61 2.82
3633 3742 8.391075 ACGGGAATATAAACATTCTACATTGG 57.609 34.615 0.00 0.00 35.61 3.16
3634 3743 7.996644 ACGGGAATATAAACATTCTACATTGGT 59.003 33.333 0.00 0.00 35.61 3.67
3635 3744 8.289618 CGGGAATATAAACATTCTACATTGGTG 58.710 37.037 0.00 0.00 35.61 4.17
3636 3745 9.131791 GGGAATATAAACATTCTACATTGGTGT 57.868 33.333 0.00 0.00 35.85 4.16
3637 3746 9.950680 GGAATATAAACATTCTACATTGGTGTG 57.049 33.333 0.00 0.00 34.97 3.82
3645 3754 9.691362 AACATTCTACATTGGTGTGTTAAAATC 57.309 29.630 0.00 0.00 39.39 2.17
3646 3755 9.077885 ACATTCTACATTGGTGTGTTAAAATCT 57.922 29.630 0.00 0.00 39.39 2.40
3647 3756 9.912634 CATTCTACATTGGTGTGTTAAAATCTT 57.087 29.630 0.00 0.00 39.39 2.40
3650 3759 8.726988 TCTACATTGGTGTGTTAAAATCTTAGC 58.273 33.333 0.00 0.00 39.39 3.09
3651 3760 7.283625 ACATTGGTGTGTTAAAATCTTAGCA 57.716 32.000 0.00 0.00 37.14 3.49
3652 3761 7.721402 ACATTGGTGTGTTAAAATCTTAGCAA 58.279 30.769 0.00 0.00 37.14 3.91
3653 3762 8.367156 ACATTGGTGTGTTAAAATCTTAGCAAT 58.633 29.630 0.00 0.00 37.14 3.56
3654 3763 9.206870 CATTGGTGTGTTAAAATCTTAGCAATT 57.793 29.630 0.00 0.00 33.95 2.32
3655 3764 9.777297 ATTGGTGTGTTAAAATCTTAGCAATTT 57.223 25.926 0.00 0.00 32.79 1.82
3656 3765 9.606631 TTGGTGTGTTAAAATCTTAGCAATTTT 57.393 25.926 0.00 0.00 39.15 1.82
3657 3766 9.606631 TGGTGTGTTAAAATCTTAGCAATTTTT 57.393 25.926 0.00 0.00 37.47 1.94
3674 3783 3.717400 TTTTTGTATGCAGTCGCCAAA 57.283 38.095 0.00 0.00 37.32 3.28
3675 3784 3.717400 TTTTGTATGCAGTCGCCAAAA 57.283 38.095 0.00 0.34 35.67 2.44
3676 3785 3.932545 TTTGTATGCAGTCGCCAAAAT 57.067 38.095 0.00 0.00 37.32 1.82
3677 3786 3.932545 TTGTATGCAGTCGCCAAAATT 57.067 38.095 0.00 0.00 37.32 1.82
3678 3787 3.932545 TGTATGCAGTCGCCAAAATTT 57.067 38.095 0.00 0.00 37.32 1.82
3679 3788 5.378292 TTGTATGCAGTCGCCAAAATTTA 57.622 34.783 0.00 0.00 37.32 1.40
3680 3789 4.728534 TGTATGCAGTCGCCAAAATTTAC 58.271 39.130 0.00 0.00 37.32 2.01
3681 3790 2.715737 TGCAGTCGCCAAAATTTACC 57.284 45.000 0.00 0.00 37.32 2.85
3682 3791 2.235016 TGCAGTCGCCAAAATTTACCT 58.765 42.857 0.00 0.00 37.32 3.08
3683 3792 2.030363 TGCAGTCGCCAAAATTTACCTG 60.030 45.455 0.00 0.00 37.32 4.00
3684 3793 2.671070 GCAGTCGCCAAAATTTACCTGG 60.671 50.000 3.40 3.40 0.00 4.45
3694 3803 6.901265 CCAAAATTTACCTGGCATCTTTTTG 58.099 36.000 12.02 12.02 34.33 2.44
3695 3804 6.709846 CCAAAATTTACCTGGCATCTTTTTGA 59.290 34.615 17.04 0.00 35.77 2.69
3696 3805 7.391275 CCAAAATTTACCTGGCATCTTTTTGAT 59.609 33.333 17.04 0.00 35.77 2.57
3697 3806 9.434420 CAAAATTTACCTGGCATCTTTTTGATA 57.566 29.630 13.01 0.00 35.77 2.15
3699 3808 9.657419 AAATTTACCTGGCATCTTTTTGATAAG 57.343 29.630 0.00 0.00 33.36 1.73
3700 3809 4.725790 ACCTGGCATCTTTTTGATAAGC 57.274 40.909 0.00 0.00 33.36 3.09
3701 3810 4.088634 ACCTGGCATCTTTTTGATAAGCA 58.911 39.130 0.00 0.00 33.36 3.91
3702 3811 4.082026 ACCTGGCATCTTTTTGATAAGCAC 60.082 41.667 0.00 0.00 33.36 4.40
3703 3812 4.159135 CCTGGCATCTTTTTGATAAGCACT 59.841 41.667 0.00 0.00 33.36 4.40
3704 3813 5.337009 CCTGGCATCTTTTTGATAAGCACTT 60.337 40.000 0.00 0.00 33.36 3.16
3705 3814 6.127647 CCTGGCATCTTTTTGATAAGCACTTA 60.128 38.462 0.00 0.00 33.36 2.24
3706 3815 7.408756 TGGCATCTTTTTGATAAGCACTTAT 57.591 32.000 2.56 2.56 38.38 1.73
3707 3816 7.839907 TGGCATCTTTTTGATAAGCACTTATT 58.160 30.769 4.48 0.00 36.02 1.40
3708 3817 8.313292 TGGCATCTTTTTGATAAGCACTTATTT 58.687 29.630 4.48 0.00 36.02 1.40
3709 3818 8.598075 GGCATCTTTTTGATAAGCACTTATTTG 58.402 33.333 4.48 0.00 36.02 2.32
3710 3819 8.598075 GCATCTTTTTGATAAGCACTTATTTGG 58.402 33.333 4.48 0.00 36.02 3.28
3711 3820 9.643693 CATCTTTTTGATAAGCACTTATTTGGT 57.356 29.630 4.48 0.00 36.02 3.67
3746 3855 9.679661 ATTGACTTACCAAAGTTTTTGGAAAAT 57.320 25.926 23.36 11.75 46.09 1.82
3747 3856 9.508642 TTGACTTACCAAAGTTTTTGGAAAATT 57.491 25.926 23.36 12.64 46.09 1.82
3748 3857 8.940952 TGACTTACCAAAGTTTTTGGAAAATTG 58.059 29.630 23.36 10.72 46.09 2.32
3749 3858 9.157104 GACTTACCAAAGTTTTTGGAAAATTGA 57.843 29.630 23.36 1.28 46.09 2.57
3750 3859 9.679661 ACTTACCAAAGTTTTTGGAAAATTGAT 57.320 25.926 23.36 4.87 43.60 2.57
3751 3860 9.934190 CTTACCAAAGTTTTTGGAAAATTGATG 57.066 29.630 23.36 5.43 42.06 3.07
3752 3861 7.332213 ACCAAAGTTTTTGGAAAATTGATGG 57.668 32.000 23.36 1.34 42.06 3.51
3753 3862 6.320926 ACCAAAGTTTTTGGAAAATTGATGGG 59.679 34.615 23.36 0.00 42.06 4.00
3754 3863 6.545298 CCAAAGTTTTTGGAAAATTGATGGGA 59.455 34.615 13.95 0.00 42.06 4.37
3755 3864 7.255208 CCAAAGTTTTTGGAAAATTGATGGGAG 60.255 37.037 13.95 0.00 42.06 4.30
3756 3865 6.745794 AGTTTTTGGAAAATTGATGGGAGA 57.254 33.333 0.00 0.00 0.00 3.71
3757 3866 7.135591 AGTTTTTGGAAAATTGATGGGAGAA 57.864 32.000 0.00 0.00 0.00 2.87
3758 3867 7.572814 AGTTTTTGGAAAATTGATGGGAGAAA 58.427 30.769 0.00 0.00 0.00 2.52
3759 3868 8.052141 AGTTTTTGGAAAATTGATGGGAGAAAA 58.948 29.630 0.00 0.00 0.00 2.29
3760 3869 8.681806 GTTTTTGGAAAATTGATGGGAGAAAAA 58.318 29.630 0.00 0.00 0.00 1.94
3787 3896 7.573968 TCAAAGAAGAAAAGAAAAGAGGAGG 57.426 36.000 0.00 0.00 0.00 4.30
3788 3897 6.547510 TCAAAGAAGAAAAGAAAAGAGGAGGG 59.452 38.462 0.00 0.00 0.00 4.30
3789 3898 4.991776 AGAAGAAAAGAAAAGAGGAGGGG 58.008 43.478 0.00 0.00 0.00 4.79
3790 3899 3.816398 AGAAAAGAAAAGAGGAGGGGG 57.184 47.619 0.00 0.00 0.00 5.40
3791 3900 3.336676 AGAAAAGAAAAGAGGAGGGGGA 58.663 45.455 0.00 0.00 0.00 4.81
3792 3901 3.074687 AGAAAAGAAAAGAGGAGGGGGAC 59.925 47.826 0.00 0.00 0.00 4.46
3793 3902 2.133858 AAGAAAAGAGGAGGGGGACA 57.866 50.000 0.00 0.00 0.00 4.02
3794 3903 2.367947 AGAAAAGAGGAGGGGGACAT 57.632 50.000 0.00 0.00 0.00 3.06
3795 3904 3.508952 AGAAAAGAGGAGGGGGACATA 57.491 47.619 0.00 0.00 0.00 2.29
3796 3905 4.027782 AGAAAAGAGGAGGGGGACATAT 57.972 45.455 0.00 0.00 0.00 1.78
3797 3906 3.718956 AGAAAAGAGGAGGGGGACATATG 59.281 47.826 0.00 0.00 0.00 1.78
3798 3907 2.897823 AAGAGGAGGGGGACATATGT 57.102 50.000 8.43 8.43 0.00 2.29
3799 3908 4.295905 AAAGAGGAGGGGGACATATGTA 57.704 45.455 8.71 0.00 0.00 2.29
3800 3909 4.295905 AAGAGGAGGGGGACATATGTAA 57.704 45.455 8.71 0.00 0.00 2.41
3801 3910 3.863086 AGAGGAGGGGGACATATGTAAG 58.137 50.000 8.71 0.00 0.00 2.34
3802 3911 2.907042 GAGGAGGGGGACATATGTAAGG 59.093 54.545 8.71 0.00 0.00 2.69
3803 3912 2.527057 AGGAGGGGGACATATGTAAGGA 59.473 50.000 8.71 0.00 0.00 3.36
3804 3913 3.050564 AGGAGGGGGACATATGTAAGGAA 60.051 47.826 8.71 0.00 0.00 3.36
3805 3914 3.328050 GGAGGGGGACATATGTAAGGAAG 59.672 52.174 8.71 0.00 0.00 3.46
3806 3915 3.327439 AGGGGGACATATGTAAGGAAGG 58.673 50.000 8.71 0.00 0.00 3.46
3807 3916 3.053826 GGGGGACATATGTAAGGAAGGT 58.946 50.000 8.71 0.00 0.00 3.50
3808 3917 3.462205 GGGGGACATATGTAAGGAAGGTT 59.538 47.826 8.71 0.00 0.00 3.50
3809 3918 4.461198 GGGGACATATGTAAGGAAGGTTG 58.539 47.826 8.71 0.00 0.00 3.77
3810 3919 4.461198 GGGACATATGTAAGGAAGGTTGG 58.539 47.826 8.71 0.00 0.00 3.77
3811 3920 4.165372 GGGACATATGTAAGGAAGGTTGGA 59.835 45.833 8.71 0.00 0.00 3.53
3812 3921 5.123936 GGACATATGTAAGGAAGGTTGGAC 58.876 45.833 8.71 0.00 0.00 4.02
3813 3922 4.766375 ACATATGTAAGGAAGGTTGGACG 58.234 43.478 6.56 0.00 0.00 4.79
3814 3923 4.468510 ACATATGTAAGGAAGGTTGGACGA 59.531 41.667 6.56 0.00 0.00 4.20
3815 3924 5.046159 ACATATGTAAGGAAGGTTGGACGAA 60.046 40.000 6.56 0.00 0.00 3.85
3816 3925 3.396260 TGTAAGGAAGGTTGGACGAAG 57.604 47.619 0.00 0.00 0.00 3.79
3817 3926 2.038033 TGTAAGGAAGGTTGGACGAAGG 59.962 50.000 0.00 0.00 0.00 3.46
3818 3927 1.430992 AAGGAAGGTTGGACGAAGGA 58.569 50.000 0.00 0.00 0.00 3.36
3819 3928 0.977395 AGGAAGGTTGGACGAAGGAG 59.023 55.000 0.00 0.00 0.00 3.69
3820 3929 0.974383 GGAAGGTTGGACGAAGGAGA 59.026 55.000 0.00 0.00 0.00 3.71
3821 3930 1.066787 GGAAGGTTGGACGAAGGAGAG 60.067 57.143 0.00 0.00 0.00 3.20
3822 3931 1.893801 GAAGGTTGGACGAAGGAGAGA 59.106 52.381 0.00 0.00 0.00 3.10
3823 3932 2.239681 AGGTTGGACGAAGGAGAGAT 57.760 50.000 0.00 0.00 0.00 2.75
3824 3933 1.827969 AGGTTGGACGAAGGAGAGATG 59.172 52.381 0.00 0.00 0.00 2.90
3825 3934 1.825474 GGTTGGACGAAGGAGAGATGA 59.175 52.381 0.00 0.00 0.00 2.92
3826 3935 2.233922 GGTTGGACGAAGGAGAGATGAA 59.766 50.000 0.00 0.00 0.00 2.57
3827 3936 3.306780 GGTTGGACGAAGGAGAGATGAAA 60.307 47.826 0.00 0.00 0.00 2.69
3828 3937 4.508662 GTTGGACGAAGGAGAGATGAAAT 58.491 43.478 0.00 0.00 0.00 2.17
3829 3938 4.128925 TGGACGAAGGAGAGATGAAATG 57.871 45.455 0.00 0.00 0.00 2.32
3830 3939 3.118629 TGGACGAAGGAGAGATGAAATGG 60.119 47.826 0.00 0.00 0.00 3.16
3831 3940 3.133003 GGACGAAGGAGAGATGAAATGGA 59.867 47.826 0.00 0.00 0.00 3.41
3832 3941 4.383118 GGACGAAGGAGAGATGAAATGGAA 60.383 45.833 0.00 0.00 0.00 3.53
3833 3942 5.165961 ACGAAGGAGAGATGAAATGGAAA 57.834 39.130 0.00 0.00 0.00 3.13
3834 3943 4.938226 ACGAAGGAGAGATGAAATGGAAAC 59.062 41.667 0.00 0.00 0.00 2.78
3835 3944 4.333926 CGAAGGAGAGATGAAATGGAAACC 59.666 45.833 0.00 0.00 0.00 3.27
3836 3945 5.504853 GAAGGAGAGATGAAATGGAAACCT 58.495 41.667 0.00 0.00 0.00 3.50
3837 3946 5.527026 AGGAGAGATGAAATGGAAACCTT 57.473 39.130 0.00 0.00 0.00 3.50
3838 3947 6.642733 AGGAGAGATGAAATGGAAACCTTA 57.357 37.500 0.00 0.00 0.00 2.69
3839 3948 6.418946 AGGAGAGATGAAATGGAAACCTTAC 58.581 40.000 0.00 0.00 0.00 2.34
3840 3949 6.012508 AGGAGAGATGAAATGGAAACCTTACA 60.013 38.462 0.00 0.00 0.00 2.41
3841 3950 6.830838 GGAGAGATGAAATGGAAACCTTACAT 59.169 38.462 0.00 0.00 0.00 2.29
3842 3951 7.340487 GGAGAGATGAAATGGAAACCTTACATT 59.660 37.037 0.00 0.00 36.46 2.71
3843 3952 8.286191 AGAGATGAAATGGAAACCTTACATTC 57.714 34.615 0.00 0.00 34.00 2.67
3844 3953 8.112183 AGAGATGAAATGGAAACCTTACATTCT 58.888 33.333 0.00 0.00 34.00 2.40
3845 3954 8.655935 AGATGAAATGGAAACCTTACATTCTT 57.344 30.769 0.00 0.00 34.00 2.52
3883 3992 4.340019 TGCCCGTGCATTGCAACG 62.340 61.111 13.94 17.64 44.23 4.10
3887 3996 2.642129 CGTGCATTGCAACGGGAA 59.358 55.556 13.94 0.00 41.47 3.97
3923 4032 8.197439 TCTAGATGACATATCACACGACATTTT 58.803 33.333 0.00 0.00 37.79 1.82
3999 4110 3.653164 ACTGGGTTGGAGGTGAAAAATT 58.347 40.909 0.00 0.00 0.00 1.82
4010 4121 4.407365 AGGTGAAAAATTCCGAGGACAAT 58.593 39.130 0.00 0.00 0.00 2.71
4021 4132 7.986085 ATTCCGAGGACAATTGATAATAAGG 57.014 36.000 13.59 6.62 0.00 2.69
4030 4141 9.533253 GGACAATTGATAATAAGGAATTTGGTG 57.467 33.333 13.59 0.00 0.00 4.17
4052 4163 5.008613 GTGTTTGTAAGGCTCATTGTCTTGA 59.991 40.000 0.00 0.00 41.28 3.02
4063 4174 6.035327 GGCTCATTGTCTTGAAAATATGCAAC 59.965 38.462 0.00 0.00 0.00 4.17
4129 4240 6.878923 TCAATGTAGAATCAACAAGGGTACAG 59.121 38.462 0.00 0.00 0.00 2.74
4222 4385 0.906775 ACCGGATATTGACAACCCGT 59.093 50.000 9.46 4.00 38.61 5.28
4295 5149 9.434420 ACTATTCTCATATAGCAGAAGATTTGC 57.566 33.333 3.31 0.00 41.83 3.68
4334 5188 9.174166 CCATCAAATATCATATTCATGAGAGCA 57.826 33.333 9.51 0.00 44.30 4.26
4339 5193 8.789825 AATATCATATTCATGAGAGCAACTCC 57.210 34.615 0.00 0.00 44.30 3.85
4340 5194 5.619132 TCATATTCATGAGAGCAACTCCA 57.381 39.130 0.00 0.00 44.34 3.86
4341 5195 5.993055 TCATATTCATGAGAGCAACTCCAA 58.007 37.500 0.00 0.90 44.34 3.53
4344 5198 3.490439 TCATGAGAGCAACTCCAACAA 57.510 42.857 0.00 0.00 44.34 2.83
4346 5200 1.597742 TGAGAGCAACTCCAACAAGC 58.402 50.000 8.13 0.00 44.34 4.01
4347 5201 0.877743 GAGAGCAACTCCAACAAGCC 59.122 55.000 0.33 0.00 39.53 4.35
4348 5202 0.886490 AGAGCAACTCCAACAAGCCG 60.886 55.000 0.00 0.00 0.00 5.52
4349 5203 0.884704 GAGCAACTCCAACAAGCCGA 60.885 55.000 0.00 0.00 0.00 5.54
4350 5204 1.166531 AGCAACTCCAACAAGCCGAC 61.167 55.000 0.00 0.00 0.00 4.79
4352 5206 1.228154 AACTCCAACAAGCCGACCC 60.228 57.895 0.00 0.00 0.00 4.46
4353 5207 1.990160 AACTCCAACAAGCCGACCCA 61.990 55.000 0.00 0.00 0.00 4.51
4355 5209 0.821711 CTCCAACAAGCCGACCCAAA 60.822 55.000 0.00 0.00 0.00 3.28
4357 5211 1.008995 CAACAAGCCGACCCAAACG 60.009 57.895 0.00 0.00 0.00 3.60
4376 5230 1.929376 GACGACGTTTTTGTCCGCT 59.071 52.632 0.13 0.00 35.40 5.52
4377 5231 0.302589 GACGACGTTTTTGTCCGCTT 59.697 50.000 0.13 0.00 35.40 4.68
4378 5232 0.728542 ACGACGTTTTTGTCCGCTTT 59.271 45.000 0.00 0.00 35.40 3.51
4379 5233 1.130938 ACGACGTTTTTGTCCGCTTTT 59.869 42.857 0.00 0.00 35.40 2.27
4380 5234 2.178783 CGACGTTTTTGTCCGCTTTTT 58.821 42.857 0.00 0.00 35.40 1.94
4381 5235 2.036086 CGACGTTTTTGTCCGCTTTTTG 60.036 45.455 0.00 0.00 35.40 2.44
4382 5236 2.918600 GACGTTTTTGTCCGCTTTTTGT 59.081 40.909 0.00 0.00 32.61 2.83
4384 5238 2.280445 CGTTTTTGTCCGCTTTTTGTCC 59.720 45.455 0.00 0.00 0.00 4.02
4386 5240 1.096416 TTTGTCCGCTTTTTGTCCGT 58.904 45.000 0.00 0.00 0.00 4.69
4387 5241 1.096416 TTGTCCGCTTTTTGTCCGTT 58.904 45.000 0.00 0.00 0.00 4.44
4388 5242 1.096416 TGTCCGCTTTTTGTCCGTTT 58.904 45.000 0.00 0.00 0.00 3.60
4390 5244 0.382515 TCCGCTTTTTGTCCGTTTGG 59.617 50.000 0.00 0.00 0.00 3.28
4391 5245 0.596341 CCGCTTTTTGTCCGTTTGGG 60.596 55.000 0.00 0.00 35.24 4.12
4392 5246 0.101579 CGCTTTTTGTCCGTTTGGGT 59.898 50.000 0.00 0.00 37.00 4.51
4393 5247 1.847818 GCTTTTTGTCCGTTTGGGTC 58.152 50.000 0.00 0.00 37.00 4.46
4394 5248 1.862411 GCTTTTTGTCCGTTTGGGTCG 60.862 52.381 0.00 0.00 37.00 4.79
4396 5250 1.726533 TTTTGTCCGTTTGGGTCGGC 61.727 55.000 0.00 0.00 46.49 5.54
4421 5275 3.743636 CCGCCGTCCGCCATTTTT 61.744 61.111 0.00 0.00 35.03 1.94
4441 5295 5.938438 TTTTAATTTTGGATTGGCAGTGC 57.062 34.783 6.55 6.55 0.00 4.40
4442 5296 2.083167 AATTTTGGATTGGCAGTGCG 57.917 45.000 9.45 0.00 0.00 5.34
4443 5297 0.968405 ATTTTGGATTGGCAGTGCGT 59.032 45.000 9.45 0.00 0.00 5.24
4444 5298 0.313672 TTTTGGATTGGCAGTGCGTC 59.686 50.000 9.45 7.11 0.00 5.19
4445 5299 0.537143 TTTGGATTGGCAGTGCGTCT 60.537 50.000 9.45 0.00 0.00 4.18
4446 5300 0.323302 TTGGATTGGCAGTGCGTCTA 59.677 50.000 9.45 2.44 0.00 2.59
4447 5301 0.323302 TGGATTGGCAGTGCGTCTAA 59.677 50.000 9.45 2.18 0.00 2.10
4449 5303 0.370273 GATTGGCAGTGCGTCTAACG 59.630 55.000 9.45 0.00 45.88 3.18
4451 5305 2.813908 GGCAGTGCGTCTAACGGG 60.814 66.667 9.45 0.00 42.82 5.28
4452 5306 2.048503 GCAGTGCGTCTAACGGGT 60.049 61.111 0.00 0.00 42.82 5.28
4453 5307 2.092882 GCAGTGCGTCTAACGGGTC 61.093 63.158 0.00 0.00 42.82 4.46
4456 5310 1.799121 GTGCGTCTAACGGGTCGAC 60.799 63.158 7.13 7.13 42.82 4.20
4471 5325 0.611200 TCGACCCATTTCATGACCGT 59.389 50.000 0.00 0.00 0.00 4.83
4473 5327 0.451783 GACCCATTTCATGACCGTGC 59.548 55.000 0.00 0.00 0.00 5.34
4474 5328 1.305219 ACCCATTTCATGACCGTGCG 61.305 55.000 0.00 0.00 0.00 5.34
4475 5329 1.305219 CCCATTTCATGACCGTGCGT 61.305 55.000 0.00 0.00 0.00 5.24
4476 5330 0.179192 CCATTTCATGACCGTGCGTG 60.179 55.000 0.00 0.00 0.00 5.34
4477 5331 0.516877 CATTTCATGACCGTGCGTGT 59.483 50.000 0.00 0.00 0.00 4.49
4478 5332 1.069296 CATTTCATGACCGTGCGTGTT 60.069 47.619 0.00 0.00 0.00 3.32
4479 5333 1.018148 TTTCATGACCGTGCGTGTTT 58.982 45.000 0.00 0.00 0.00 2.83
4480 5334 1.018148 TTCATGACCGTGCGTGTTTT 58.982 45.000 0.00 0.00 0.00 2.43
4481 5335 1.867166 TCATGACCGTGCGTGTTTTA 58.133 45.000 0.00 0.00 0.00 1.52
4482 5336 1.795872 TCATGACCGTGCGTGTTTTAG 59.204 47.619 0.00 0.00 0.00 1.85
4484 5338 2.157834 TGACCGTGCGTGTTTTAGAT 57.842 45.000 0.00 0.00 0.00 1.98
4485 5339 2.063266 TGACCGTGCGTGTTTTAGATC 58.937 47.619 0.00 0.00 0.00 2.75
4486 5340 2.063266 GACCGTGCGTGTTTTAGATCA 58.937 47.619 0.00 0.00 0.00 2.92
4487 5341 2.671396 GACCGTGCGTGTTTTAGATCAT 59.329 45.455 0.00 0.00 0.00 2.45
4488 5342 2.415168 ACCGTGCGTGTTTTAGATCATG 59.585 45.455 0.00 0.00 0.00 3.07
4489 5343 2.430956 CGTGCGTGTTTTAGATCATGC 58.569 47.619 0.00 2.36 44.01 4.06
4490 5344 2.094258 CGTGCGTGTTTTAGATCATGCT 59.906 45.455 9.26 0.00 44.06 3.79
4491 5345 3.305897 CGTGCGTGTTTTAGATCATGCTA 59.694 43.478 9.26 0.00 44.06 3.49
4492 5346 4.548916 CGTGCGTGTTTTAGATCATGCTAG 60.549 45.833 9.26 0.00 44.06 3.42
4494 5348 3.602491 GCGTGTTTTAGATCATGCTAGCG 60.602 47.826 10.77 0.00 41.56 4.26
4495 5349 3.060272 CGTGTTTTAGATCATGCTAGCGG 60.060 47.826 10.77 4.96 0.00 5.52
4498 5352 1.047801 TTAGATCATGCTAGCGGCCA 58.952 50.000 10.77 0.00 40.92 5.36
4499 5353 1.269958 TAGATCATGCTAGCGGCCAT 58.730 50.000 10.77 0.00 40.92 4.40
4500 5354 0.321387 AGATCATGCTAGCGGCCATG 60.321 55.000 10.77 8.30 40.92 3.66
4501 5355 0.604780 GATCATGCTAGCGGCCATGT 60.605 55.000 10.77 0.00 40.92 3.21
4502 5356 0.604780 ATCATGCTAGCGGCCATGTC 60.605 55.000 10.77 0.00 40.92 3.06
4503 5357 2.280389 ATGCTAGCGGCCATGTCG 60.280 61.111 10.77 0.00 40.92 4.35
4504 5358 3.094062 ATGCTAGCGGCCATGTCGT 62.094 57.895 10.77 0.00 40.92 4.34
4505 5359 2.962253 GCTAGCGGCCATGTCGTC 60.962 66.667 2.24 1.44 31.29 4.20
4506 5360 2.655364 CTAGCGGCCATGTCGTCG 60.655 66.667 2.24 0.10 31.29 5.12
4513 5367 4.082523 CCATGTCGTCGCCCTGGT 62.083 66.667 0.00 0.00 0.00 4.00
4514 5368 2.047274 CATGTCGTCGCCCTGGTT 60.047 61.111 0.00 0.00 0.00 3.67
4515 5369 1.671054 CATGTCGTCGCCCTGGTTT 60.671 57.895 0.00 0.00 0.00 3.27
4516 5370 1.072505 ATGTCGTCGCCCTGGTTTT 59.927 52.632 0.00 0.00 0.00 2.43
4517 5371 1.234615 ATGTCGTCGCCCTGGTTTTG 61.235 55.000 0.00 0.00 0.00 2.44
4518 5372 2.281208 TCGTCGCCCTGGTTTTGG 60.281 61.111 0.00 0.00 0.00 3.28
4519 5373 4.038080 CGTCGCCCTGGTTTTGGC 62.038 66.667 0.00 0.00 44.41 4.52
4523 5377 4.056125 GCCCTGGTTTTGGCGCTC 62.056 66.667 7.64 0.00 38.00 5.03
4524 5378 3.373565 CCCTGGTTTTGGCGCTCC 61.374 66.667 7.64 3.30 0.00 4.70
4525 5379 2.597217 CCTGGTTTTGGCGCTCCA 60.597 61.111 7.64 7.90 41.55 3.86
4526 5380 2.629656 CCTGGTTTTGGCGCTCCAG 61.630 63.158 20.13 20.13 44.53 3.86
4527 5381 3.273080 CTGGTTTTGGCGCTCCAGC 62.273 63.158 7.64 0.00 44.53 4.85
4540 5394 2.361610 CCAGCGCATGGGAAAGGT 60.362 61.111 14.90 0.00 46.36 3.50
4541 5395 1.978617 CCAGCGCATGGGAAAGGTT 60.979 57.895 14.90 0.00 46.36 3.50
4542 5396 1.508088 CAGCGCATGGGAAAGGTTC 59.492 57.895 14.90 0.00 0.00 3.62
4543 5397 2.040544 AGCGCATGGGAAAGGTTCG 61.041 57.895 14.90 0.00 0.00 3.95
4544 5398 2.332654 GCGCATGGGAAAGGTTCGT 61.333 57.895 14.90 0.00 0.00 3.85
4545 5399 1.501741 CGCATGGGAAAGGTTCGTG 59.498 57.895 3.11 0.00 0.00 4.35
4546 5400 1.212751 GCATGGGAAAGGTTCGTGC 59.787 57.895 0.00 0.00 0.00 5.34
4547 5401 1.501741 CATGGGAAAGGTTCGTGCG 59.498 57.895 0.00 0.00 0.00 5.34
4548 5402 2.332654 ATGGGAAAGGTTCGTGCGC 61.333 57.895 0.00 0.00 0.00 6.09
4549 5403 4.084888 GGGAAAGGTTCGTGCGCG 62.085 66.667 14.79 14.79 39.92 6.86
4550 5404 4.084888 GGAAAGGTTCGTGCGCGG 62.085 66.667 21.04 0.85 38.89 6.46
4551 5405 4.084888 GAAAGGTTCGTGCGCGGG 62.085 66.667 21.04 0.00 38.89 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
109 111 3.333680 AGGATAGAAAGGGAGGTTGCAAA 59.666 43.478 0.00 0.00 0.00 3.68
127 129 4.591072 GGTGAGCACTAATAGGAAGAGGAT 59.409 45.833 0.16 0.00 0.00 3.24
138 140 1.837439 TCCCGATTGGTGAGCACTAAT 59.163 47.619 11.30 11.30 43.73 1.73
248 250 1.066303 TGTCGAACAATGGGTTGCAAC 59.934 47.619 21.59 21.59 40.63 4.17
260 262 9.047371 TGATAGACTTTGTTAATTTGTCGAACA 57.953 29.630 0.00 0.00 33.40 3.18
264 266 7.744715 GTGGTGATAGACTTTGTTAATTTGTCG 59.255 37.037 0.00 0.00 33.40 4.35
284 286 5.186797 ACCAGATTTTGAAGTTTTGTGGTGA 59.813 36.000 0.00 0.00 34.48 4.02
320 322 3.403968 GGTCCTTTCTTGTCTTCTGGTC 58.596 50.000 0.00 0.00 0.00 4.02
436 438 2.187946 CGATGTCACTGCTCCCCC 59.812 66.667 0.00 0.00 0.00 5.40
590 594 1.463831 GCTGTGAGTTGCTGACTGATG 59.536 52.381 0.00 0.00 39.19 3.07
593 597 1.530293 GAAGCTGTGAGTTGCTGACTG 59.470 52.381 0.00 0.00 39.19 3.51
632 638 5.005971 GTGATGCAAAATATGGACAATGCAC 59.994 40.000 0.00 0.00 45.37 4.57
639 645 4.942761 ATGGGTGATGCAAAATATGGAC 57.057 40.909 0.00 0.00 29.34 4.02
671 677 9.562408 TCCGATTACATTGTATTTATAAGGCAA 57.438 29.630 0.00 2.46 0.00 4.52
672 678 9.562408 TTCCGATTACATTGTATTTATAAGGCA 57.438 29.630 0.00 0.00 0.00 4.75
734 740 7.047891 GGAACTCATATGGTGATGTGAAACTA 58.952 38.462 2.13 0.00 35.97 2.24
788 794 3.077359 GAGGGTGTCTTCAATCCACAAG 58.923 50.000 0.00 0.00 0.00 3.16
816 822 6.235664 TGTCTGTAGGTTTCTATGGGTTTTC 58.764 40.000 0.00 0.00 0.00 2.29
923 935 7.741785 TCGGGAATTAATGACATTATGGTAGT 58.258 34.615 8.69 0.00 0.00 2.73
958 970 4.695396 GTCCATGATTAATTGGCATGCAA 58.305 39.130 21.36 4.92 38.40 4.08
981 993 3.553508 CCATTGCACTGCATTTATAGGGC 60.554 47.826 4.10 0.00 43.55 5.19
992 1004 3.539604 AGATCTACTTCCATTGCACTGC 58.460 45.455 0.00 0.00 0.00 4.40
995 1007 4.141846 TGGAGAGATCTACTTCCATTGCAC 60.142 45.833 15.55 0.00 33.91 4.57
1021 1033 8.758633 TTCAAAACAAAAATGAACTTTACCGA 57.241 26.923 0.00 0.00 0.00 4.69
1116 1128 4.678309 GCGAGCACCAATACTAGAAAGAGT 60.678 45.833 0.00 0.00 0.00 3.24
1126 1138 3.102097 GCTGGCGAGCACCAATAC 58.898 61.111 16.60 0.00 45.46 1.89
1207 1219 5.814481 ACTACCTACCTCGTTAGAGTTTCT 58.186 41.667 0.00 0.00 42.86 2.52
1250 1262 6.426633 GGAAACATGTAAAGAAACCAAATGGG 59.573 38.462 0.00 0.00 44.81 4.00
1294 1306 6.869315 TTTCATACTGAAATGGAAACGTCA 57.131 33.333 0.00 0.00 41.02 4.35
1326 1338 8.156820 TGAGAATATATGGGATTCAATCGTGTT 58.843 33.333 0.00 0.00 36.03 3.32
1330 1342 8.783833 AAGTGAGAATATATGGGATTCAATCG 57.216 34.615 0.00 0.00 36.03 3.34
1347 1359 6.249035 AGAAACAACGAAACAAAGTGAGAA 57.751 33.333 0.00 0.00 0.00 2.87
1362 1374 8.706521 AGGGGATCTATCTAAACTAGAAACAAC 58.293 37.037 0.00 0.00 38.50 3.32
1371 1383 9.845214 ATGTAATACAGGGGATCTATCTAAACT 57.155 33.333 0.00 0.00 0.00 2.66
1387 1399 9.093970 TCGAAAGAAATACACCATGTAATACAG 57.906 33.333 0.00 0.00 34.83 2.74
1411 1423 2.044123 AAAAGCCAGCCTCCTATTCG 57.956 50.000 0.00 0.00 0.00 3.34
1441 1454 3.123621 CCGATGCACAAAGACTTGACTAC 59.876 47.826 0.00 0.00 36.33 2.73
1547 1563 8.489990 GTTTATCTAAACACCTAGAAAGGGAC 57.510 38.462 7.74 0.00 43.70 4.46
1576 1619 7.228590 TGTCTAATTAGCCTAAAGGTTTGTGT 58.771 34.615 7.67 0.00 37.57 3.72
1577 1620 7.681939 TGTCTAATTAGCCTAAAGGTTTGTG 57.318 36.000 7.67 0.00 37.57 3.33
1578 1621 7.942894 ACTTGTCTAATTAGCCTAAAGGTTTGT 59.057 33.333 7.67 0.00 37.57 2.83
1583 1626 9.668497 AACTTACTTGTCTAATTAGCCTAAAGG 57.332 33.333 7.67 0.00 38.53 3.11
1587 1630 7.551617 GCCAAACTTACTTGTCTAATTAGCCTA 59.448 37.037 7.67 0.00 0.00 3.93
1601 1644 4.367039 TCTTAGCCAGCCAAACTTACTT 57.633 40.909 0.00 0.00 0.00 2.24
1705 1750 9.057089 CCCTCAAATCCTAGTATAACATTTGTC 57.943 37.037 0.00 0.00 34.05 3.18
1712 1757 5.845065 AGACCCCCTCAAATCCTAGTATAAC 59.155 44.000 0.00 0.00 0.00 1.89
1756 1801 3.622166 TCTACCCCGAAAACTCCATTC 57.378 47.619 0.00 0.00 0.00 2.67
1841 1886 0.179018 ACAGCTTCCCTGCGTTTCTT 60.179 50.000 0.00 0.00 45.78 2.52
1848 1893 3.610911 ACTATTACAACAGCTTCCCTGC 58.389 45.455 0.00 0.00 45.78 4.85
1867 1912 7.202047 GGATGGAGGAGTACTGATTTCATAACT 60.202 40.741 0.00 0.00 0.00 2.24
1900 1945 3.321111 TGAAGAAGCGTATTAGGCCCTAG 59.679 47.826 0.00 0.00 0.00 3.02
1915 1960 3.311486 GTCAGAGGTGACCTGAAGAAG 57.689 52.381 9.89 0.00 46.58 2.85
1976 2021 8.534333 TCACATACGAATTTAGCCATATTCTC 57.466 34.615 0.00 0.00 0.00 2.87
2138 2183 1.946855 TACGACGCGCAAATTCGTGG 61.947 55.000 25.76 11.24 45.24 4.94
2141 2186 1.171414 CGTTACGACGCGCAAATTCG 61.171 55.000 5.73 10.68 43.03 3.34
2154 2199 5.779806 ATGTCAATCTTCCTTTCGTTACG 57.220 39.130 0.00 0.00 0.00 3.18
2155 2200 9.326339 GTAAAATGTCAATCTTCCTTTCGTTAC 57.674 33.333 0.00 0.00 0.00 2.50
2206 2251 7.373441 GCAATACTAATCGTGCTACATTTTGTC 59.627 37.037 0.00 0.00 34.13 3.18
2213 2258 6.536941 TGATTTGCAATACTAATCGTGCTACA 59.463 34.615 0.00 0.00 41.64 2.74
2224 2269 4.235079 ACAGGGCTGATTTGCAATACTA 57.765 40.909 0.00 0.00 34.04 1.82
2229 2274 2.819608 GAGTTACAGGGCTGATTTGCAA 59.180 45.455 0.00 0.00 34.04 4.08
2233 2278 2.832129 TCGAGAGTTACAGGGCTGATTT 59.168 45.455 0.00 0.00 0.00 2.17
2272 2317 6.646240 AGTCAAATCCCACAAAATTTTGATCG 59.354 34.615 32.20 20.30 40.55 3.69
2328 2374 1.347707 TGATTCCGTTGAGGCAAGTCT 59.652 47.619 0.00 0.00 40.77 3.24
2339 2385 4.998672 TCGGTTATTGTTTCTGATTCCGTT 59.001 37.500 0.00 0.00 37.26 4.44
2360 2406 6.438259 TGTATTCCTTCTTCACTCTACTCG 57.562 41.667 0.00 0.00 0.00 4.18
2374 2420 8.380099 TGGTCACTAGTTAATGTTGTATTCCTT 58.620 33.333 0.00 0.00 0.00 3.36
2450 2527 7.467623 AGACTCAAATATTGTCGAAGCATTTC 58.532 34.615 0.00 0.00 36.01 2.17
2451 2528 7.383102 AGACTCAAATATTGTCGAAGCATTT 57.617 32.000 0.00 0.00 36.01 2.32
2474 2551 9.398170 CATTATTGGAGAAATATTTGGCGTTAG 57.602 33.333 5.17 0.00 30.74 2.34
2478 2555 7.167968 CACACATTATTGGAGAAATATTTGGCG 59.832 37.037 5.17 0.00 30.74 5.69
2479 2556 7.981225 ACACACATTATTGGAGAAATATTTGGC 59.019 33.333 5.17 0.00 30.74 4.52
2555 2635 8.700051 TGTTACTAGAGTAGTACTACAGTAGGG 58.300 40.741 29.87 17.82 40.74 3.53
2642 2738 2.816958 ATCCTGCGCGCAGTTCAG 60.817 61.111 46.97 35.46 42.15 3.02
2837 2936 4.832608 GGGGTCCATGGCGACGAC 62.833 72.222 6.96 0.00 33.30 4.34
3310 3419 3.112709 GCCGTGTCGAGGAACTGC 61.113 66.667 0.00 0.00 41.55 4.40
3454 3563 1.296056 GCGCCATCACCGTGTAGTTT 61.296 55.000 0.00 0.00 0.00 2.66
3560 3669 4.877378 TTTTCTTCTTCCCGTGCTACTA 57.123 40.909 0.00 0.00 0.00 1.82
3570 3679 9.627395 GACCTTAGCTTTAAATTTTCTTCTTCC 57.373 33.333 0.00 0.00 0.00 3.46
3582 3691 5.624281 GCAATGCATGGACCTTAGCTTTAAA 60.624 40.000 4.87 0.00 0.00 1.52
3584 3693 3.381272 GCAATGCATGGACCTTAGCTTTA 59.619 43.478 4.87 0.00 0.00 1.85
3587 3696 1.341285 TGCAATGCATGGACCTTAGCT 60.341 47.619 2.72 0.00 31.71 3.32
3588 3697 1.105457 TGCAATGCATGGACCTTAGC 58.895 50.000 2.72 0.00 31.71 3.09
3589 3698 2.478370 CGTTGCAATGCATGGACCTTAG 60.478 50.000 9.39 0.00 38.76 2.18
3590 3699 1.472082 CGTTGCAATGCATGGACCTTA 59.528 47.619 9.39 0.00 38.76 2.69
3591 3700 0.244450 CGTTGCAATGCATGGACCTT 59.756 50.000 9.39 0.00 38.76 3.50
3592 3701 1.597797 CCGTTGCAATGCATGGACCT 61.598 55.000 18.61 0.00 38.76 3.85
3593 3702 1.153784 CCGTTGCAATGCATGGACC 60.154 57.895 18.61 1.22 38.76 4.46
3594 3703 1.153784 CCCGTTGCAATGCATGGAC 60.154 57.895 23.25 12.46 38.76 4.02
3595 3704 0.897401 TTCCCGTTGCAATGCATGGA 60.897 50.000 23.25 19.05 38.76 3.41
3596 3705 0.176219 ATTCCCGTTGCAATGCATGG 59.824 50.000 9.39 14.18 38.76 3.66
3597 3706 2.867287 TATTCCCGTTGCAATGCATG 57.133 45.000 9.39 4.77 38.76 4.06
3598 3707 5.163468 TGTTTATATTCCCGTTGCAATGCAT 60.163 36.000 9.39 7.20 38.76 3.96
3599 3708 4.158579 TGTTTATATTCCCGTTGCAATGCA 59.841 37.500 13.42 2.72 36.47 3.96
3600 3709 4.677584 TGTTTATATTCCCGTTGCAATGC 58.322 39.130 13.42 0.00 0.00 3.56
3601 3710 7.202526 AGAATGTTTATATTCCCGTTGCAATG 58.797 34.615 11.90 11.90 37.70 2.82
3602 3711 7.346751 AGAATGTTTATATTCCCGTTGCAAT 57.653 32.000 0.59 0.00 37.70 3.56
3603 3712 6.767524 AGAATGTTTATATTCCCGTTGCAA 57.232 33.333 0.00 0.00 37.70 4.08
3604 3713 6.824196 TGTAGAATGTTTATATTCCCGTTGCA 59.176 34.615 0.00 0.00 37.70 4.08
3605 3714 7.254227 TGTAGAATGTTTATATTCCCGTTGC 57.746 36.000 0.00 0.00 37.70 4.17
3606 3715 9.663904 CAATGTAGAATGTTTATATTCCCGTTG 57.336 33.333 0.00 0.00 37.70 4.10
3607 3716 8.846211 CCAATGTAGAATGTTTATATTCCCGTT 58.154 33.333 0.00 0.00 37.70 4.44
3608 3717 7.996644 ACCAATGTAGAATGTTTATATTCCCGT 59.003 33.333 0.00 0.00 37.70 5.28
3609 3718 8.289618 CACCAATGTAGAATGTTTATATTCCCG 58.710 37.037 0.00 0.00 37.70 5.14
3610 3719 9.131791 ACACCAATGTAGAATGTTTATATTCCC 57.868 33.333 0.00 0.00 37.26 3.97
3611 3720 9.950680 CACACCAATGTAGAATGTTTATATTCC 57.049 33.333 0.00 0.00 36.72 3.01
3619 3728 9.691362 GATTTTAACACACCAATGTAGAATGTT 57.309 29.630 0.00 0.00 36.72 2.71
3620 3729 9.077885 AGATTTTAACACACCAATGTAGAATGT 57.922 29.630 0.00 0.00 36.72 2.71
3621 3730 9.912634 AAGATTTTAACACACCAATGTAGAATG 57.087 29.630 0.00 0.00 36.72 2.67
3624 3733 8.726988 GCTAAGATTTTAACACACCAATGTAGA 58.273 33.333 0.00 0.00 36.72 2.59
3625 3734 8.511321 TGCTAAGATTTTAACACACCAATGTAG 58.489 33.333 0.00 0.00 36.72 2.74
3626 3735 8.397575 TGCTAAGATTTTAACACACCAATGTA 57.602 30.769 0.00 0.00 36.72 2.29
3627 3736 7.283625 TGCTAAGATTTTAACACACCAATGT 57.716 32.000 0.00 0.00 40.80 2.71
3628 3737 8.761575 ATTGCTAAGATTTTAACACACCAATG 57.238 30.769 0.00 0.00 0.00 2.82
3629 3738 9.777297 AAATTGCTAAGATTTTAACACACCAAT 57.223 25.926 0.00 0.00 0.00 3.16
3630 3739 9.606631 AAAATTGCTAAGATTTTAACACACCAA 57.393 25.926 0.00 0.00 35.54 3.67
3631 3740 9.606631 AAAAATTGCTAAGATTTTAACACACCA 57.393 25.926 0.00 0.00 36.09 4.17
3654 3763 3.717400 TTTGGCGACTGCATACAAAAA 57.283 38.095 0.00 0.00 45.35 1.94
3655 3764 3.717400 TTTTGGCGACTGCATACAAAA 57.283 38.095 0.00 0.00 45.35 2.44
3656 3765 3.932545 ATTTTGGCGACTGCATACAAA 57.067 38.095 0.00 0.00 45.35 2.83
3657 3766 3.932545 AATTTTGGCGACTGCATACAA 57.067 38.095 0.00 0.00 45.35 2.41
3658 3767 3.932545 AAATTTTGGCGACTGCATACA 57.067 38.095 0.00 0.00 45.35 2.29
3659 3768 4.102649 GGTAAATTTTGGCGACTGCATAC 58.897 43.478 0.00 0.00 45.35 2.39
3660 3769 4.013728 AGGTAAATTTTGGCGACTGCATA 58.986 39.130 0.00 0.00 45.35 3.14
3661 3770 2.825532 AGGTAAATTTTGGCGACTGCAT 59.174 40.909 0.00 0.00 45.35 3.96
3662 3771 2.030363 CAGGTAAATTTTGGCGACTGCA 60.030 45.455 0.00 0.00 45.35 4.41
3663 3772 2.595386 CAGGTAAATTTTGGCGACTGC 58.405 47.619 0.00 0.00 41.71 4.40
3664 3773 2.671070 GCCAGGTAAATTTTGGCGACTG 60.671 50.000 14.87 6.57 46.82 3.51
3665 3774 1.544246 GCCAGGTAAATTTTGGCGACT 59.456 47.619 14.87 0.00 46.82 4.18
3666 3775 1.990799 GCCAGGTAAATTTTGGCGAC 58.009 50.000 14.87 0.00 46.82 5.19
3670 3779 6.709846 TCAAAAAGATGCCAGGTAAATTTTGG 59.290 34.615 17.75 0.00 37.21 3.28
3671 3780 7.727331 TCAAAAAGATGCCAGGTAAATTTTG 57.273 32.000 14.44 14.44 37.68 2.44
3673 3782 9.657419 CTTATCAAAAAGATGCCAGGTAAATTT 57.343 29.630 0.00 0.00 37.57 1.82
3674 3783 7.765819 GCTTATCAAAAAGATGCCAGGTAAATT 59.234 33.333 0.00 0.00 37.57 1.82
3675 3784 7.093377 TGCTTATCAAAAAGATGCCAGGTAAAT 60.093 33.333 0.00 0.00 37.57 1.40
3676 3785 6.210385 TGCTTATCAAAAAGATGCCAGGTAAA 59.790 34.615 0.00 0.00 37.57 2.01
3677 3786 5.714333 TGCTTATCAAAAAGATGCCAGGTAA 59.286 36.000 0.00 0.00 37.57 2.85
3678 3787 5.125417 GTGCTTATCAAAAAGATGCCAGGTA 59.875 40.000 0.00 0.00 37.57 3.08
3679 3788 4.082026 GTGCTTATCAAAAAGATGCCAGGT 60.082 41.667 0.00 0.00 37.57 4.00
3680 3789 4.159135 AGTGCTTATCAAAAAGATGCCAGG 59.841 41.667 0.00 0.00 37.57 4.45
3681 3790 5.320549 AGTGCTTATCAAAAAGATGCCAG 57.679 39.130 0.00 0.00 37.57 4.85
3682 3791 5.726980 AAGTGCTTATCAAAAAGATGCCA 57.273 34.783 0.00 0.00 37.57 4.92
3683 3792 8.598075 CAAATAAGTGCTTATCAAAAAGATGCC 58.402 33.333 5.08 0.00 37.57 4.40
3684 3793 8.598075 CCAAATAAGTGCTTATCAAAAAGATGC 58.402 33.333 5.08 0.00 37.57 3.91
3685 3794 9.643693 ACCAAATAAGTGCTTATCAAAAAGATG 57.356 29.630 5.08 0.00 37.57 2.90
3720 3829 9.679661 ATTTTCCAAAAACTTTGGTAAGTCAAT 57.320 25.926 15.86 3.38 43.74 2.57
3721 3830 9.508642 AATTTTCCAAAAACTTTGGTAAGTCAA 57.491 25.926 15.86 1.89 43.74 3.18
3722 3831 8.940952 CAATTTTCCAAAAACTTTGGTAAGTCA 58.059 29.630 15.86 1.75 43.74 3.41
3723 3832 9.157104 TCAATTTTCCAAAAACTTTGGTAAGTC 57.843 29.630 15.86 0.00 43.74 3.01
3724 3833 9.679661 ATCAATTTTCCAAAAACTTTGGTAAGT 57.320 25.926 15.86 8.38 46.44 2.24
3725 3834 9.934190 CATCAATTTTCCAAAAACTTTGGTAAG 57.066 29.630 15.86 4.28 40.40 2.34
3726 3835 8.897752 CCATCAATTTTCCAAAAACTTTGGTAA 58.102 29.630 15.86 11.00 40.40 2.85
3727 3836 7.500559 CCCATCAATTTTCCAAAAACTTTGGTA 59.499 33.333 15.86 5.84 40.40 3.25
3728 3837 6.320926 CCCATCAATTTTCCAAAAACTTTGGT 59.679 34.615 15.86 0.00 40.40 3.67
3729 3838 6.545298 TCCCATCAATTTTCCAAAAACTTTGG 59.455 34.615 11.24 11.24 40.87 3.28
3730 3839 7.498570 TCTCCCATCAATTTTCCAAAAACTTTG 59.501 33.333 0.00 0.00 0.00 2.77
3731 3840 7.572814 TCTCCCATCAATTTTCCAAAAACTTT 58.427 30.769 0.00 0.00 0.00 2.66
3732 3841 7.135591 TCTCCCATCAATTTTCCAAAAACTT 57.864 32.000 0.00 0.00 0.00 2.66
3733 3842 6.745794 TCTCCCATCAATTTTCCAAAAACT 57.254 33.333 0.00 0.00 0.00 2.66
3734 3843 7.800155 TTTCTCCCATCAATTTTCCAAAAAC 57.200 32.000 0.00 0.00 0.00 2.43
3735 3844 8.814038 TTTTTCTCCCATCAATTTTCCAAAAA 57.186 26.923 0.00 0.00 0.00 1.94
3761 3870 8.637099 CCTCCTCTTTTCTTTTCTTCTTTGATT 58.363 33.333 0.00 0.00 0.00 2.57
3762 3871 7.232330 CCCTCCTCTTTTCTTTTCTTCTTTGAT 59.768 37.037 0.00 0.00 0.00 2.57
3763 3872 6.547510 CCCTCCTCTTTTCTTTTCTTCTTTGA 59.452 38.462 0.00 0.00 0.00 2.69
3764 3873 6.239148 CCCCTCCTCTTTTCTTTTCTTCTTTG 60.239 42.308 0.00 0.00 0.00 2.77
3765 3874 5.835819 CCCCTCCTCTTTTCTTTTCTTCTTT 59.164 40.000 0.00 0.00 0.00 2.52
3766 3875 5.389520 CCCCTCCTCTTTTCTTTTCTTCTT 58.610 41.667 0.00 0.00 0.00 2.52
3767 3876 4.202620 CCCCCTCCTCTTTTCTTTTCTTCT 60.203 45.833 0.00 0.00 0.00 2.85
3768 3877 4.082845 CCCCCTCCTCTTTTCTTTTCTTC 58.917 47.826 0.00 0.00 0.00 2.87
3769 3878 3.727391 TCCCCCTCCTCTTTTCTTTTCTT 59.273 43.478 0.00 0.00 0.00 2.52
3770 3879 3.074687 GTCCCCCTCCTCTTTTCTTTTCT 59.925 47.826 0.00 0.00 0.00 2.52
3771 3880 3.181433 TGTCCCCCTCCTCTTTTCTTTTC 60.181 47.826 0.00 0.00 0.00 2.29
3772 3881 2.789399 TGTCCCCCTCCTCTTTTCTTTT 59.211 45.455 0.00 0.00 0.00 2.27
3773 3882 2.428901 TGTCCCCCTCCTCTTTTCTTT 58.571 47.619 0.00 0.00 0.00 2.52
3774 3883 2.133858 TGTCCCCCTCCTCTTTTCTT 57.866 50.000 0.00 0.00 0.00 2.52
3775 3884 2.367947 ATGTCCCCCTCCTCTTTTCT 57.632 50.000 0.00 0.00 0.00 2.52
3776 3885 3.459969 ACATATGTCCCCCTCCTCTTTTC 59.540 47.826 1.41 0.00 0.00 2.29
3777 3886 3.474920 ACATATGTCCCCCTCCTCTTTT 58.525 45.455 1.41 0.00 0.00 2.27
3778 3887 3.151542 ACATATGTCCCCCTCCTCTTT 57.848 47.619 1.41 0.00 0.00 2.52
3779 3888 2.897823 ACATATGTCCCCCTCCTCTT 57.102 50.000 1.41 0.00 0.00 2.85
3780 3889 3.440154 CCTTACATATGTCCCCCTCCTCT 60.440 52.174 12.68 0.00 0.00 3.69
3781 3890 2.907042 CCTTACATATGTCCCCCTCCTC 59.093 54.545 12.68 0.00 0.00 3.71
3782 3891 2.527057 TCCTTACATATGTCCCCCTCCT 59.473 50.000 12.68 0.00 0.00 3.69
3783 3892 2.986050 TCCTTACATATGTCCCCCTCC 58.014 52.381 12.68 0.00 0.00 4.30
3784 3893 3.328050 CCTTCCTTACATATGTCCCCCTC 59.672 52.174 12.68 0.00 0.00 4.30
3785 3894 3.312155 ACCTTCCTTACATATGTCCCCCT 60.312 47.826 12.68 0.00 0.00 4.79
3786 3895 3.053826 ACCTTCCTTACATATGTCCCCC 58.946 50.000 12.68 0.00 0.00 5.40
3787 3896 4.461198 CAACCTTCCTTACATATGTCCCC 58.539 47.826 12.68 0.00 0.00 4.81
3788 3897 4.165372 TCCAACCTTCCTTACATATGTCCC 59.835 45.833 12.68 0.00 0.00 4.46
3789 3898 5.123936 GTCCAACCTTCCTTACATATGTCC 58.876 45.833 12.68 0.00 0.00 4.02
3790 3899 4.809426 CGTCCAACCTTCCTTACATATGTC 59.191 45.833 12.68 0.00 0.00 3.06
3791 3900 4.468510 TCGTCCAACCTTCCTTACATATGT 59.531 41.667 13.93 13.93 0.00 2.29
3792 3901 5.018539 TCGTCCAACCTTCCTTACATATG 57.981 43.478 0.00 0.00 0.00 1.78
3793 3902 5.396436 CCTTCGTCCAACCTTCCTTACATAT 60.396 44.000 0.00 0.00 0.00 1.78
3794 3903 4.081309 CCTTCGTCCAACCTTCCTTACATA 60.081 45.833 0.00 0.00 0.00 2.29
3795 3904 3.307480 CCTTCGTCCAACCTTCCTTACAT 60.307 47.826 0.00 0.00 0.00 2.29
3796 3905 2.038033 CCTTCGTCCAACCTTCCTTACA 59.962 50.000 0.00 0.00 0.00 2.41
3797 3906 2.301009 TCCTTCGTCCAACCTTCCTTAC 59.699 50.000 0.00 0.00 0.00 2.34
3798 3907 2.565834 CTCCTTCGTCCAACCTTCCTTA 59.434 50.000 0.00 0.00 0.00 2.69
3799 3908 1.348036 CTCCTTCGTCCAACCTTCCTT 59.652 52.381 0.00 0.00 0.00 3.36
3800 3909 0.977395 CTCCTTCGTCCAACCTTCCT 59.023 55.000 0.00 0.00 0.00 3.36
3801 3910 0.974383 TCTCCTTCGTCCAACCTTCC 59.026 55.000 0.00 0.00 0.00 3.46
3802 3911 1.893801 TCTCTCCTTCGTCCAACCTTC 59.106 52.381 0.00 0.00 0.00 3.46
3803 3912 2.011122 TCTCTCCTTCGTCCAACCTT 57.989 50.000 0.00 0.00 0.00 3.50
3804 3913 1.827969 CATCTCTCCTTCGTCCAACCT 59.172 52.381 0.00 0.00 0.00 3.50
3805 3914 1.825474 TCATCTCTCCTTCGTCCAACC 59.175 52.381 0.00 0.00 0.00 3.77
3806 3915 3.594603 TTCATCTCTCCTTCGTCCAAC 57.405 47.619 0.00 0.00 0.00 3.77
3807 3916 4.507710 CATTTCATCTCTCCTTCGTCCAA 58.492 43.478 0.00 0.00 0.00 3.53
3808 3917 3.118629 CCATTTCATCTCTCCTTCGTCCA 60.119 47.826 0.00 0.00 0.00 4.02
3809 3918 3.133003 TCCATTTCATCTCTCCTTCGTCC 59.867 47.826 0.00 0.00 0.00 4.79
3810 3919 4.392921 TCCATTTCATCTCTCCTTCGTC 57.607 45.455 0.00 0.00 0.00 4.20
3811 3920 4.826274 TTCCATTTCATCTCTCCTTCGT 57.174 40.909 0.00 0.00 0.00 3.85
3812 3921 4.333926 GGTTTCCATTTCATCTCTCCTTCG 59.666 45.833 0.00 0.00 0.00 3.79
3813 3922 5.504853 AGGTTTCCATTTCATCTCTCCTTC 58.495 41.667 0.00 0.00 0.00 3.46
3814 3923 5.527026 AGGTTTCCATTTCATCTCTCCTT 57.473 39.130 0.00 0.00 0.00 3.36
3815 3924 5.527026 AAGGTTTCCATTTCATCTCTCCT 57.473 39.130 0.00 0.00 0.00 3.69
3816 3925 6.180472 TGTAAGGTTTCCATTTCATCTCTCC 58.820 40.000 0.00 0.00 0.00 3.71
3817 3926 7.872113 ATGTAAGGTTTCCATTTCATCTCTC 57.128 36.000 0.00 0.00 0.00 3.20
3818 3927 8.112183 AGAATGTAAGGTTTCCATTTCATCTCT 58.888 33.333 0.00 0.00 0.00 3.10
3819 3928 8.286191 AGAATGTAAGGTTTCCATTTCATCTC 57.714 34.615 0.00 0.00 0.00 2.75
3820 3929 8.655935 AAGAATGTAAGGTTTCCATTTCATCT 57.344 30.769 0.00 0.00 0.00 2.90
3821 3930 9.710900 AAAAGAATGTAAGGTTTCCATTTCATC 57.289 29.630 0.00 0.00 0.00 2.92
3844 3953 9.671279 GGGCAATTACCTAGTACTACTTAAAAA 57.329 33.333 0.00 0.00 0.00 1.94
3845 3954 7.981225 CGGGCAATTACCTAGTACTACTTAAAA 59.019 37.037 0.00 0.00 0.00 1.52
3851 3960 4.614946 CACGGGCAATTACCTAGTACTAC 58.385 47.826 0.00 0.00 0.00 2.73
3854 3963 2.207590 GCACGGGCAATTACCTAGTAC 58.792 52.381 3.77 0.00 40.72 2.73
3855 3964 2.607631 GCACGGGCAATTACCTAGTA 57.392 50.000 3.77 0.00 40.72 1.82
3878 3987 2.423538 AGAATGTTATGCTTCCCGTTGC 59.576 45.455 0.00 0.00 0.00 4.17
3883 3992 6.291377 TGTCATCTAGAATGTTATGCTTCCC 58.709 40.000 0.00 0.00 0.00 3.97
3887 3996 9.650539 GTGATATGTCATCTAGAATGTTATGCT 57.349 33.333 0.00 0.00 36.60 3.79
3923 4032 6.404293 CCAACGGAGAGAAAAACAGAAGAAAA 60.404 38.462 0.00 0.00 0.00 2.29
3999 4110 6.740944 TCCTTATTATCAATTGTCCTCGGA 57.259 37.500 5.13 2.05 0.00 4.55
4021 4132 5.195001 TGAGCCTTACAAACACCAAATTC 57.805 39.130 0.00 0.00 0.00 2.17
4030 4141 5.689383 TCAAGACAATGAGCCTTACAAAC 57.311 39.130 0.00 0.00 0.00 2.93
4052 4163 7.659799 TGGTCGTAGCTATATGTTGCATATTTT 59.340 33.333 0.00 0.00 0.00 1.82
4117 4228 1.614317 GCATGGCTCTGTACCCTTGTT 60.614 52.381 0.00 0.00 0.00 2.83
4123 4234 2.487934 CTACATGCATGGCTCTGTACC 58.512 52.381 29.41 0.00 0.00 3.34
4206 4369 2.354821 GAGCAACGGGTTGTCAATATCC 59.645 50.000 12.65 0.00 42.31 2.59
4222 4385 0.107831 ACAGTTGTAAGGCCGAGCAA 59.892 50.000 0.00 0.38 0.00 3.91
4229 5083 2.287608 GGAAGTGCAACAGTTGTAAGGC 60.288 50.000 14.88 0.39 41.43 4.35
4326 5180 2.157738 GCTTGTTGGAGTTGCTCTCAT 58.842 47.619 10.56 0.00 44.40 2.90
4330 5184 0.884704 TCGGCTTGTTGGAGTTGCTC 60.885 55.000 0.00 0.00 0.00 4.26
4331 5185 1.148273 TCGGCTTGTTGGAGTTGCT 59.852 52.632 0.00 0.00 0.00 3.91
4332 5186 1.282875 GTCGGCTTGTTGGAGTTGC 59.717 57.895 0.00 0.00 0.00 4.17
4334 5188 1.228154 GGGTCGGCTTGTTGGAGTT 60.228 57.895 0.00 0.00 0.00 3.01
4336 5190 0.821711 TTTGGGTCGGCTTGTTGGAG 60.822 55.000 0.00 0.00 0.00 3.86
4338 5192 1.362355 GTTTGGGTCGGCTTGTTGG 59.638 57.895 0.00 0.00 0.00 3.77
4339 5193 1.008995 CGTTTGGGTCGGCTTGTTG 60.009 57.895 0.00 0.00 0.00 3.33
4340 5194 2.190841 CCGTTTGGGTCGGCTTGTT 61.191 57.895 0.00 0.00 41.48 2.83
4341 5195 2.593436 CCGTTTGGGTCGGCTTGT 60.593 61.111 0.00 0.00 41.48 3.16
4344 5198 4.675029 CGTCCGTTTGGGTCGGCT 62.675 66.667 0.00 0.00 46.49 5.52
4346 5200 2.735857 GTCGTCCGTTTGGGTCGG 60.736 66.667 0.00 0.00 45.67 4.79
4347 5201 3.101428 CGTCGTCCGTTTGGGTCG 61.101 66.667 0.00 0.00 46.78 4.79
4357 5211 1.083209 GCGGACAAAAACGTCGTCC 60.083 57.895 13.54 13.54 44.79 4.79
4358 5212 0.302589 AAGCGGACAAAAACGTCGTC 59.697 50.000 0.00 0.00 36.73 4.20
4359 5213 0.728542 AAAGCGGACAAAAACGTCGT 59.271 45.000 0.00 0.00 36.73 4.34
4360 5214 1.817609 AAAAGCGGACAAAAACGTCG 58.182 45.000 0.00 0.00 36.73 5.12
4362 5216 2.918600 GACAAAAAGCGGACAAAAACGT 59.081 40.909 0.00 0.00 0.00 3.99
4364 5218 2.280445 CGGACAAAAAGCGGACAAAAAC 59.720 45.455 0.00 0.00 0.00 2.43
4365 5219 2.094649 ACGGACAAAAAGCGGACAAAAA 60.095 40.909 0.00 0.00 0.00 1.94
4366 5220 1.473278 ACGGACAAAAAGCGGACAAAA 59.527 42.857 0.00 0.00 0.00 2.44
4368 5222 1.096416 AACGGACAAAAAGCGGACAA 58.904 45.000 0.00 0.00 0.00 3.18
4371 5225 0.382515 CCAAACGGACAAAAAGCGGA 59.617 50.000 0.00 0.00 0.00 5.54
4374 5228 1.847818 GACCCAAACGGACAAAAAGC 58.152 50.000 0.00 0.00 34.64 3.51
4404 5258 3.743636 AAAAATGGCGGACGGCGG 61.744 61.111 13.24 0.00 44.92 6.13
4418 5272 5.049818 CGCACTGCCAATCCAAAATTAAAAA 60.050 36.000 0.00 0.00 0.00 1.94
4419 5273 4.450419 CGCACTGCCAATCCAAAATTAAAA 59.550 37.500 0.00 0.00 0.00 1.52
4420 5274 3.993081 CGCACTGCCAATCCAAAATTAAA 59.007 39.130 0.00 0.00 0.00 1.52
4421 5275 3.006323 ACGCACTGCCAATCCAAAATTAA 59.994 39.130 0.00 0.00 0.00 1.40
4422 5276 2.560542 ACGCACTGCCAATCCAAAATTA 59.439 40.909 0.00 0.00 0.00 1.40
4423 5277 1.344114 ACGCACTGCCAATCCAAAATT 59.656 42.857 0.00 0.00 0.00 1.82
4424 5278 0.968405 ACGCACTGCCAATCCAAAAT 59.032 45.000 0.00 0.00 0.00 1.82
4425 5279 0.313672 GACGCACTGCCAATCCAAAA 59.686 50.000 0.00 0.00 0.00 2.44
4426 5280 0.537143 AGACGCACTGCCAATCCAAA 60.537 50.000 0.00 0.00 0.00 3.28
4427 5281 0.323302 TAGACGCACTGCCAATCCAA 59.677 50.000 0.00 0.00 0.00 3.53
4428 5282 0.323302 TTAGACGCACTGCCAATCCA 59.677 50.000 0.00 0.00 0.00 3.41
4430 5284 0.370273 CGTTAGACGCACTGCCAATC 59.630 55.000 0.00 0.00 33.65 2.67
4431 5285 1.019278 CCGTTAGACGCACTGCCAAT 61.019 55.000 0.00 0.00 40.91 3.16
4432 5286 1.666553 CCGTTAGACGCACTGCCAA 60.667 57.895 0.00 0.00 40.91 4.52
4433 5287 2.048597 CCGTTAGACGCACTGCCA 60.049 61.111 0.00 0.00 40.91 4.92
4434 5288 2.813908 CCCGTTAGACGCACTGCC 60.814 66.667 0.00 0.00 40.91 4.85
4435 5289 2.048503 ACCCGTTAGACGCACTGC 60.049 61.111 0.00 0.00 40.91 4.40
4436 5290 1.800315 CGACCCGTTAGACGCACTG 60.800 63.158 0.00 0.00 40.91 3.66
4437 5291 1.968017 TCGACCCGTTAGACGCACT 60.968 57.895 0.00 0.00 40.91 4.40
4438 5292 1.799121 GTCGACCCGTTAGACGCAC 60.799 63.158 3.51 0.00 40.91 5.34
4439 5293 2.562912 GTCGACCCGTTAGACGCA 59.437 61.111 3.51 0.00 40.91 5.24
4451 5305 1.006832 CGGTCATGAAATGGGTCGAC 58.993 55.000 7.13 7.13 46.73 4.20
4452 5306 0.611200 ACGGTCATGAAATGGGTCGA 59.389 50.000 0.00 0.00 46.73 4.20
4453 5307 0.726827 CACGGTCATGAAATGGGTCG 59.273 55.000 0.00 0.00 46.73 4.79
4456 5310 1.305219 ACGCACGGTCATGAAATGGG 61.305 55.000 14.14 14.14 46.73 4.00
4459 5313 1.234821 AACACGCACGGTCATGAAAT 58.765 45.000 0.00 0.00 0.00 2.17
4460 5314 1.018148 AAACACGCACGGTCATGAAA 58.982 45.000 0.00 0.00 0.00 2.69
4464 5318 2.157834 TCTAAAACACGCACGGTCAT 57.842 45.000 0.00 0.00 0.00 3.06
4465 5319 2.063266 GATCTAAAACACGCACGGTCA 58.937 47.619 0.00 0.00 0.00 4.02
4466 5320 2.063266 TGATCTAAAACACGCACGGTC 58.937 47.619 0.00 0.00 0.00 4.79
4467 5321 2.157834 TGATCTAAAACACGCACGGT 57.842 45.000 0.00 0.00 0.00 4.83
4468 5322 2.787723 GCATGATCTAAAACACGCACGG 60.788 50.000 0.00 0.00 0.00 4.94
4471 5325 3.309682 GCTAGCATGATCTAAAACACGCA 59.690 43.478 10.63 0.00 0.00 5.24
4473 5327 3.060272 CCGCTAGCATGATCTAAAACACG 60.060 47.826 16.45 0.00 0.00 4.49
4474 5328 3.303395 GCCGCTAGCATGATCTAAAACAC 60.303 47.826 16.45 0.00 42.97 3.32
4475 5329 2.872245 GCCGCTAGCATGATCTAAAACA 59.128 45.455 16.45 0.00 42.97 2.83
4476 5330 2.224314 GGCCGCTAGCATGATCTAAAAC 59.776 50.000 16.45 0.00 46.50 2.43
4477 5331 2.158827 TGGCCGCTAGCATGATCTAAAA 60.159 45.455 16.45 0.00 46.50 1.52
4478 5332 1.416030 TGGCCGCTAGCATGATCTAAA 59.584 47.619 16.45 0.00 46.50 1.85
4479 5333 1.047801 TGGCCGCTAGCATGATCTAA 58.952 50.000 16.45 0.00 46.50 2.10
4480 5334 1.066645 CATGGCCGCTAGCATGATCTA 60.067 52.381 16.45 0.00 46.50 1.98
4481 5335 0.321387 CATGGCCGCTAGCATGATCT 60.321 55.000 16.45 0.00 46.50 2.75
4482 5336 0.604780 ACATGGCCGCTAGCATGATC 60.605 55.000 16.45 0.00 46.50 2.92
4484 5338 1.227645 GACATGGCCGCTAGCATGA 60.228 57.895 16.45 0.00 46.50 3.07
4485 5339 2.601398 CGACATGGCCGCTAGCATG 61.601 63.158 16.45 12.97 46.50 4.06
4486 5340 2.280389 CGACATGGCCGCTAGCAT 60.280 61.111 16.45 0.00 46.50 3.79
4487 5341 3.716539 GACGACATGGCCGCTAGCA 62.717 63.158 16.45 0.00 46.50 3.49
4488 5342 2.962253 GACGACATGGCCGCTAGC 60.962 66.667 4.06 4.06 42.60 3.42
4489 5343 2.655364 CGACGACATGGCCGCTAG 60.655 66.667 0.00 0.00 0.00 3.42
4490 5344 4.865761 GCGACGACATGGCCGCTA 62.866 66.667 14.11 0.00 43.75 4.26
4498 5352 1.072505 AAAACCAGGGCGACGACAT 59.927 52.632 1.63 0.00 0.00 3.06
4499 5353 1.890041 CAAAACCAGGGCGACGACA 60.890 57.895 1.63 0.00 0.00 4.35
4500 5354 2.613506 CCAAAACCAGGGCGACGAC 61.614 63.158 0.00 0.00 0.00 4.34
4501 5355 2.281208 CCAAAACCAGGGCGACGA 60.281 61.111 0.00 0.00 0.00 4.20
4502 5356 4.038080 GCCAAAACCAGGGCGACG 62.038 66.667 0.00 0.00 40.93 5.12
4506 5360 4.056125 GAGCGCCAAAACCAGGGC 62.056 66.667 2.29 0.00 46.80 5.19
4508 5362 2.597217 TGGAGCGCCAAAACCAGG 60.597 61.111 6.75 0.00 42.49 4.45
4509 5363 2.956987 CTGGAGCGCCAAAACCAG 59.043 61.111 11.38 11.97 45.41 4.00
4510 5364 3.294493 GCTGGAGCGCCAAAACCA 61.294 61.111 11.38 5.74 45.41 3.67
4523 5377 1.937546 GAACCTTTCCCATGCGCTGG 61.938 60.000 9.73 13.82 45.51 4.85
4524 5378 1.508088 GAACCTTTCCCATGCGCTG 59.492 57.895 9.73 4.25 0.00 5.18
4525 5379 2.040544 CGAACCTTTCCCATGCGCT 61.041 57.895 9.73 0.00 0.00 5.92
4526 5380 2.332654 ACGAACCTTTCCCATGCGC 61.333 57.895 0.00 0.00 0.00 6.09
4527 5381 1.501741 CACGAACCTTTCCCATGCG 59.498 57.895 0.00 0.00 0.00 4.73
4528 5382 1.212751 GCACGAACCTTTCCCATGC 59.787 57.895 0.00 0.00 0.00 4.06
4529 5383 1.501741 CGCACGAACCTTTCCCATG 59.498 57.895 0.00 0.00 0.00 3.66
4530 5384 2.332654 GCGCACGAACCTTTCCCAT 61.333 57.895 0.30 0.00 0.00 4.00
4531 5385 2.975799 GCGCACGAACCTTTCCCA 60.976 61.111 0.30 0.00 0.00 4.37
4532 5386 4.084888 CGCGCACGAACCTTTCCC 62.085 66.667 8.75 0.00 43.93 3.97
4533 5387 4.084888 CCGCGCACGAACCTTTCC 62.085 66.667 8.75 0.00 43.93 3.13
4534 5388 4.084888 CCCGCGCACGAACCTTTC 62.085 66.667 8.75 0.00 43.93 2.62


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.