Multiple sequence alignment - TraesCS3D01G423300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G423300 chr3D 100.000 8234 0 0 1 8234 535779389 535787622 0.000000e+00 15206.0
1 TraesCS3D01G423300 chr3D 91.379 58 5 0 4402 4459 535783756 535783813 6.850000e-11 80.5
2 TraesCS3D01G423300 chr3D 91.379 58 5 0 4368 4425 535783790 535783847 6.850000e-11 80.5
3 TraesCS3D01G423300 chr3A 94.639 4831 162 35 1705 6473 671137977 671142772 0.000000e+00 7396.0
4 TraesCS3D01G423300 chr3A 93.407 1183 51 11 6464 7639 671143165 671144327 0.000000e+00 1727.0
5 TraesCS3D01G423300 chr3A 84.328 804 70 24 1 763 671136008 671136796 0.000000e+00 736.0
6 TraesCS3D01G423300 chr3A 91.935 434 26 2 1053 1486 671137509 671137933 4.250000e-167 599.0
7 TraesCS3D01G423300 chr3A 84.709 327 26 2 7931 8234 671257213 671257538 1.040000e-78 305.0
8 TraesCS3D01G423300 chr3A 90.435 115 8 1 7662 7773 671257096 671257210 1.850000e-31 148.0
9 TraesCS3D01G423300 chr3A 93.103 58 4 0 4402 4459 671140635 671140692 1.470000e-12 86.1
10 TraesCS3D01G423300 chr3B 94.555 2112 78 17 5549 7639 707439706 707441801 0.000000e+00 3229.0
11 TraesCS3D01G423300 chr3B 91.376 1832 98 32 1705 3516 707430056 707431847 0.000000e+00 2453.0
12 TraesCS3D01G423300 chr3B 93.207 1531 45 15 3529 5039 707431831 707433322 0.000000e+00 2196.0
13 TraesCS3D01G423300 chr3B 90.885 757 48 11 801 1548 707429313 707430057 0.000000e+00 996.0
14 TraesCS3D01G423300 chr3B 95.541 471 20 1 5037 5506 707439132 707439602 0.000000e+00 752.0
15 TraesCS3D01G423300 chr3B 83.887 782 86 21 1 763 707427832 707428592 0.000000e+00 710.0
16 TraesCS3D01G423300 chr3B 84.756 328 24 6 7930 8233 707442306 707442631 1.040000e-78 305.0
17 TraesCS3D01G423300 chr3B 92.683 164 11 1 7769 7932 604820149 604819987 1.380000e-57 235.0
18 TraesCS3D01G423300 chr3B 92.683 164 11 1 7769 7932 674990135 674989973 1.380000e-57 235.0
19 TraesCS3D01G423300 chr3B 90.909 165 11 3 1546 1706 428703824 428703660 1.390000e-52 219.0
20 TraesCS3D01G423300 chr3B 91.111 90 5 1 7686 7772 707442219 707442308 1.450000e-22 119.0
21 TraesCS3D01G423300 chr7D 88.644 317 25 6 1705 2019 592034928 592035235 7.800000e-100 375.0
22 TraesCS3D01G423300 chr7D 87.188 320 30 6 1705 2022 107243198 107242888 3.660000e-93 353.0
23 TraesCS3D01G423300 chr7D 91.632 239 20 0 1310 1548 509208272 509208034 1.710000e-86 331.0
24 TraesCS3D01G423300 chr7D 91.632 239 20 0 1310 1548 592034691 592034929 1.710000e-86 331.0
25 TraesCS3D01G423300 chr7B 88.013 317 27 6 1705 2019 574618392 574618699 1.690000e-96 364.0
26 TraesCS3D01G423300 chr7B 91.213 239 21 0 1310 1548 72264889 72265127 7.970000e-85 326.0
27 TraesCS3D01G423300 chr7B 91.411 163 14 0 7771 7933 382331930 382332092 2.990000e-54 224.0
28 TraesCS3D01G423300 chr7B 84.242 165 20 3 1547 1707 627601374 627601212 1.110000e-33 156.0
29 TraesCS3D01G423300 chr5D 88.013 317 27 6 1705 2019 92291175 92291482 1.690000e-96 364.0
30 TraesCS3D01G423300 chr5D 87.500 320 29 6 1705 2022 51588526 51588216 7.860000e-95 359.0
31 TraesCS3D01G423300 chr5D 87.188 320 30 6 1705 2022 437731155 437730845 3.660000e-93 353.0
32 TraesCS3D01G423300 chr5D 91.213 239 21 0 1310 1548 92290938 92291176 7.970000e-85 326.0
33 TraesCS3D01G423300 chr5D 91.463 164 10 3 1547 1706 322370166 322370003 1.080000e-53 222.0
34 TraesCS3D01G423300 chr5B 86.751 317 31 6 1708 2022 31739864 31739557 7.910000e-90 342.0
35 TraesCS3D01G423300 chr5B 91.411 163 13 1 7770 7932 566789476 566789637 1.080000e-53 222.0
36 TraesCS3D01G423300 chr5B 84.615 78 11 1 3071 3148 618275865 618275789 8.860000e-10 76.8
37 TraesCS3D01G423300 chr2D 92.050 239 19 0 1310 1548 104549622 104549384 3.680000e-88 337.0
38 TraesCS3D01G423300 chr2D 91.228 171 15 0 7766 7936 413879602 413879772 4.970000e-57 233.0
39 TraesCS3D01G423300 chr2D 92.073 164 9 3 1546 1705 526525122 526524959 2.310000e-55 228.0
40 TraesCS3D01G423300 chr2D 89.474 171 12 3 1546 1710 480163323 480163153 2.330000e-50 211.0
41 TraesCS3D01G423300 chr2D 93.478 138 9 0 3149 3286 122864244 122864107 1.080000e-48 206.0
42 TraesCS3D01G423300 chr2D 93.431 137 7 1 3151 3285 67561267 67561131 1.400000e-47 202.0
43 TraesCS3D01G423300 chr1D 91.632 239 20 0 1310 1548 152473710 152473948 1.710000e-86 331.0
44 TraesCS3D01G423300 chr1D 90.377 239 23 0 1310 1548 152623106 152623344 1.730000e-81 315.0
45 TraesCS3D01G423300 chr1D 90.741 162 12 3 1547 1706 289532272 289532112 6.470000e-51 213.0
46 TraesCS3D01G423300 chr1D 94.776 134 6 1 3149 3282 7349836 7349704 3.010000e-49 207.0
47 TraesCS3D01G423300 chr5A 90.377 239 23 0 1310 1548 40242453 40242215 1.730000e-81 315.0
48 TraesCS3D01G423300 chr5A 89.831 177 10 4 1547 1719 535362670 535362842 3.870000e-53 220.0
49 TraesCS3D01G423300 chrUn 92.727 165 12 0 7771 7935 141680907 141680743 1.070000e-58 239.0
50 TraesCS3D01G423300 chrUn 80.769 104 11 9 3071 3170 469964168 469964070 1.150000e-08 73.1
51 TraesCS3D01G423300 chr6B 92.638 163 10 2 7771 7932 314546987 314547148 4.970000e-57 233.0
52 TraesCS3D01G423300 chr6B 89.474 152 14 2 1544 1693 548811081 548811232 3.030000e-44 191.0
53 TraesCS3D01G423300 chr6B 82.407 216 34 2 3071 3283 203686308 203686094 1.410000e-42 185.0
54 TraesCS3D01G423300 chr7A 91.411 163 14 0 7771 7933 691723808 691723646 2.990000e-54 224.0
55 TraesCS3D01G423300 chr7A 85.965 171 19 2 1543 1708 36656070 36655900 2.360000e-40 178.0
56 TraesCS3D01G423300 chr7A 87.500 152 16 3 1543 1693 518848195 518848344 1.100000e-38 172.0
57 TraesCS3D01G423300 chr7A 93.069 101 6 1 3047 3147 32581813 32581912 6.660000e-31 147.0
58 TraesCS3D01G423300 chr6A 90.230 174 12 4 1537 1706 48520212 48520040 1.080000e-53 222.0
59 TraesCS3D01G423300 chr6A 89.820 167 13 1 1547 1709 5939240 5939074 2.330000e-50 211.0
60 TraesCS3D01G423300 chr4B 89.266 177 17 1 7771 7945 372049002 372048826 3.870000e-53 220.0
61 TraesCS3D01G423300 chr4B 94.030 134 8 0 3149 3282 613321842 613321975 3.900000e-48 204.0
62 TraesCS3D01G423300 chr4D 89.326 178 12 6 1543 1714 351669912 351670088 5.000000e-52 217.0
63 TraesCS3D01G423300 chr4D 80.769 104 12 8 3071 3170 328532863 328532764 3.190000e-09 75.0
64 TraesCS3D01G423300 chr4D 80.769 104 11 9 3071 3170 328536234 328536136 1.150000e-08 73.1
65 TraesCS3D01G423300 chr2A 92.806 139 10 0 3151 3289 66799867 66800005 1.400000e-47 202.0
66 TraesCS3D01G423300 chr2A 92.754 138 10 0 3149 3286 127198300 127198163 5.040000e-47 200.0
67 TraesCS3D01G423300 chr2A 85.965 171 19 4 1540 1706 38921040 38920871 2.360000e-40 178.0
68 TraesCS3D01G423300 chr2B 83.333 174 23 5 1541 1710 694067869 694068040 1.110000e-33 156.0
69 TraesCS3D01G423300 chr2B 90.244 41 4 0 696 736 648955593 648955633 4.000000e-03 54.7
70 TraesCS3D01G423300 chr4A 84.810 79 7 4 3071 3147 709692125 709692050 3.190000e-09 75.0
71 TraesCS3D01G423300 chr1B 85.915 71 9 1 3077 3147 20236661 20236730 3.190000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G423300 chr3D 535779389 535787622 8233 False 5122.333333 15206 94.252667 1 8234 3 chr3D.!!$F1 8233
1 TraesCS3D01G423300 chr3A 671136008 671144327 8319 False 2108.820000 7396 91.482400 1 7639 5 chr3A.!!$F1 7638
2 TraesCS3D01G423300 chr3B 707427832 707433322 5490 False 1588.750000 2453 89.838750 1 5039 4 chr3B.!!$F1 5038
3 TraesCS3D01G423300 chr3B 707439132 707442631 3499 False 1101.250000 3229 91.490750 5037 8233 4 chr3B.!!$F2 3196
4 TraesCS3D01G423300 chr7D 592034691 592035235 544 False 353.000000 375 90.138000 1310 2019 2 chr7D.!!$F1 709
5 TraesCS3D01G423300 chr5D 92290938 92291482 544 False 345.000000 364 89.613000 1310 2019 2 chr5D.!!$F1 709

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
366 393 0.453282 CTGCGTGTTCGGAGCAAATG 60.453 55.000 0.00 0.00 46.93 2.32 F
368 395 0.793861 GCGTGTTCGGAGCAAATGTA 59.206 50.000 0.00 0.00 37.56 2.29 F
1742 2730 0.535335 TCACCTGATCCAGTAACCGC 59.465 55.000 0.00 0.00 0.00 5.68 F
3053 4070 0.326143 TCCCTCCATTCATCCGTCCA 60.326 55.000 0.00 0.00 0.00 4.02 F
3642 4668 0.321653 GGTCAAGCTGTTCGGGTCAT 60.322 55.000 0.00 0.00 0.00 3.06 F
5082 6135 2.161855 GACATTCCAGATGTTGTGGCA 58.838 47.619 0.00 0.00 34.77 4.92 F
6664 8221 1.464734 AGCTCTAGTACTGCGCAAGA 58.535 50.000 13.05 10.28 43.02 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1714 2702 0.107459 GGATCAGGTGACCAGAAGCC 60.107 60.000 3.63 3.92 0.00 4.35 R
2022 3012 0.824759 AAGTGGATAGCCGGACACTC 59.175 55.000 5.05 0.00 42.85 3.51 R
3642 4668 1.868713 TCTTATAACGGGGGCACTCA 58.131 50.000 0.00 0.00 0.00 3.41 R
4419 5448 1.272212 GGAGTCCAGCTATGCTAGAGC 59.728 57.143 3.60 0.00 36.40 4.09 R
5583 6722 0.251608 GGCTTTAGAACCAGGCCCAA 60.252 55.000 0.00 0.00 37.12 4.12 R
6693 8250 0.482446 AATCACCCAAGCCAGGTTGA 59.518 50.000 11.01 0.00 34.56 3.18 R
8023 9963 0.106868 TTGGAGGAGGCATGCATCTG 60.107 55.000 29.25 0.00 0.00 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 6.154877 TGGATTGATGCCACTTTTTGATACAT 59.845 34.615 0.00 0.00 0.00 2.29
95 98 4.083164 TGCACATGAGCTTTCTACATTGTG 60.083 41.667 16.24 0.00 34.99 3.33
97 100 5.122239 GCACATGAGCTTTCTACATTGTGTA 59.878 40.000 7.97 0.00 32.04 2.90
129 132 4.161565 TGGTTAGCCATGAGTCGACTAATT 59.838 41.667 20.09 4.35 40.46 1.40
132 135 6.200475 GGTTAGCCATGAGTCGACTAATTAAC 59.800 42.308 20.09 19.65 34.09 2.01
177 180 8.121305 ACAATCATTAGAGTTGGCAATAAACA 57.879 30.769 1.92 0.00 0.00 2.83
183 186 4.973168 AGAGTTGGCAATAAACACTCTCA 58.027 39.130 10.66 0.00 0.00 3.27
193 196 6.017605 GCAATAAACACTCTCATCTATGGTGG 60.018 42.308 0.00 0.00 32.88 4.61
239 244 7.530426 AGGCTTTGATTATCAGAAAAACACT 57.470 32.000 0.00 0.00 0.00 3.55
278 297 4.843147 TGTGCATTCGGATAAAAATAGCG 58.157 39.130 0.00 0.00 0.00 4.26
356 383 2.027073 TGGCGACATCTGCGTGTTC 61.027 57.895 0.00 0.00 33.40 3.18
357 384 2.391821 GCGACATCTGCGTGTTCG 59.608 61.111 0.00 0.00 40.37 3.95
365 392 1.868997 CTGCGTGTTCGGAGCAAAT 59.131 52.632 0.00 0.00 46.93 2.32
366 393 0.453282 CTGCGTGTTCGGAGCAAATG 60.453 55.000 0.00 0.00 46.93 2.32
368 395 0.793861 GCGTGTTCGGAGCAAATGTA 59.206 50.000 0.00 0.00 37.56 2.29
369 396 1.195900 GCGTGTTCGGAGCAAATGTAA 59.804 47.619 0.00 0.00 37.56 2.41
372 399 4.472286 CGTGTTCGGAGCAAATGTAAAAT 58.528 39.130 0.00 0.00 0.00 1.82
374 401 6.081049 CGTGTTCGGAGCAAATGTAAAATAA 58.919 36.000 0.00 0.00 0.00 1.40
408 435 5.049954 CCTTTCAACATGCTTCAAAACATGG 60.050 40.000 10.06 0.00 46.35 3.66
453 487 9.745018 TTTTTCTTCTTTGTCTATCAGGATCAT 57.255 29.630 0.00 0.00 0.00 2.45
454 488 9.745018 TTTTCTTCTTTGTCTATCAGGATCATT 57.255 29.630 0.00 0.00 0.00 2.57
455 489 8.728337 TTCTTCTTTGTCTATCAGGATCATTG 57.272 34.615 0.00 0.00 0.00 2.82
487 522 6.254804 TCACGAAAATTCATATGTGAGGTACG 59.745 38.462 1.90 5.23 35.39 3.67
488 523 6.035650 CACGAAAATTCATATGTGAGGTACGT 59.964 38.462 1.90 0.00 35.39 3.57
490 525 6.475727 CGAAAATTCATATGTGAGGTACGTCT 59.524 38.462 16.00 0.00 35.39 4.18
492 527 8.644318 AAAATTCATATGTGAGGTACGTCTAC 57.356 34.615 16.00 12.39 35.39 2.59
501 536 6.151691 TGTGAGGTACGTCTACATTTTGTAC 58.848 40.000 16.00 3.36 35.75 2.90
506 542 6.363357 AGGTACGTCTACATTTTGTACGAAAC 59.637 38.462 10.52 0.00 35.12 2.78
508 544 6.586868 ACGTCTACATTTTGTACGAAACAA 57.413 33.333 10.52 4.38 46.41 2.83
528 564 9.696917 GAAACAATATTATGCTATTTCCCCAAG 57.303 33.333 0.00 0.00 0.00 3.61
556 592 0.878416 TCATTTAGGCGGTTGTGCAC 59.122 50.000 10.75 10.75 36.28 4.57
602 640 8.797438 GTCCTTCATTCTCCTTTTTGAGTAAAT 58.203 33.333 0.00 0.00 33.93 1.40
614 652 7.598869 CCTTTTTGAGTAAATTTTGCTACTCCC 59.401 37.037 13.67 0.00 42.21 4.30
620 658 7.121168 TGAGTAAATTTTGCTACTCCCTTCATG 59.879 37.037 13.67 0.00 42.21 3.07
651 689 7.536964 TGAATACGACATGCACACATTTTAAAG 59.463 33.333 0.00 0.00 32.87 1.85
698 736 9.685276 AGATCAATCAAATGTAGGTTATGACAA 57.315 29.630 0.00 0.00 0.00 3.18
763 803 9.581099 AATCGTATAATTTTTAGGCCACAAAAG 57.419 29.630 5.01 0.00 0.00 2.27
764 804 7.540299 TCGTATAATTTTTAGGCCACAAAAGG 58.460 34.615 5.01 0.00 0.00 3.11
765 805 7.177041 TCGTATAATTTTTAGGCCACAAAAGGT 59.823 33.333 5.01 4.77 0.00 3.50
777 1061 4.399303 GCCACAAAAGGTGCACTATAGATT 59.601 41.667 17.98 1.18 46.50 2.40
809 1537 7.781548 AATTGAATTCTGAAATGCATTAGCC 57.218 32.000 13.39 5.94 41.13 3.93
815 1543 8.710749 AATTCTGAAATGCATTAGCCCTATTA 57.289 30.769 13.39 0.00 41.13 0.98
834 1562 9.247861 CCCTATTAATTGGAATGAAGGGAATAG 57.752 37.037 16.44 0.00 44.39 1.73
846 1576 9.541143 GAATGAAGGGAATAGAAAAGAGAGTAG 57.459 37.037 0.00 0.00 0.00 2.57
858 1588 7.653647 AGAAAAGAGAGTAGAACGGCTATATG 58.346 38.462 0.00 0.00 0.00 1.78
901 1631 3.600388 ACCTGCCTTCGATAAAAGACAG 58.400 45.455 0.00 0.00 36.74 3.51
904 1634 5.175859 CCTGCCTTCGATAAAAGACAGTAA 58.824 41.667 0.00 0.00 35.63 2.24
905 1635 5.292101 CCTGCCTTCGATAAAAGACAGTAAG 59.708 44.000 0.00 0.00 35.63 2.34
906 1636 6.032956 TGCCTTCGATAAAAGACAGTAAGA 57.967 37.500 0.00 0.00 0.00 2.10
907 1637 5.867716 TGCCTTCGATAAAAGACAGTAAGAC 59.132 40.000 0.00 0.00 0.00 3.01
909 1639 6.183360 GCCTTCGATAAAAGACAGTAAGACAC 60.183 42.308 0.00 0.00 0.00 3.67
910 1640 7.091443 CCTTCGATAAAAGACAGTAAGACACT 58.909 38.462 0.00 0.00 38.32 3.55
911 1641 8.242053 CCTTCGATAAAAGACAGTAAGACACTA 58.758 37.037 0.00 0.00 34.98 2.74
912 1642 8.961294 TTCGATAAAAGACAGTAAGACACTAC 57.039 34.615 0.00 0.00 34.98 2.73
913 1643 8.332996 TCGATAAAAGACAGTAAGACACTACT 57.667 34.615 0.00 0.00 34.98 2.57
926 1656 8.643324 AGTAAGACACTACTGAAAAATCAGTCT 58.357 33.333 14.24 3.76 46.96 3.24
962 1692 2.217745 CCCGCCTCCTTATCCCTCC 61.218 68.421 0.00 0.00 0.00 4.30
963 1693 2.217745 CCGCCTCCTTATCCCTCCC 61.218 68.421 0.00 0.00 0.00 4.30
964 1694 1.152226 CGCCTCCTTATCCCTCCCT 60.152 63.158 0.00 0.00 0.00 4.20
965 1695 1.188871 CGCCTCCTTATCCCTCCCTC 61.189 65.000 0.00 0.00 0.00 4.30
1073 2056 1.505353 GACTCACTACCACGACCCG 59.495 63.158 0.00 0.00 0.00 5.28
1110 2093 3.839432 GTTCGCCCTCCTCCTCCG 61.839 72.222 0.00 0.00 0.00 4.63
1267 2250 0.866061 CCACTTCGGCTCGTACGATG 60.866 60.000 19.87 11.90 40.38 3.84
1418 2401 4.007644 CGGTGCTGCAGGAGGTGA 62.008 66.667 17.12 0.00 0.00 4.02
1434 2417 1.464997 GGTGACGGATTTCTTCAGTGC 59.535 52.381 0.00 0.00 32.52 4.40
1435 2418 2.417719 GTGACGGATTTCTTCAGTGCT 58.582 47.619 0.00 0.00 32.52 4.40
1482 2470 4.016706 GGGCAGGCTGGTACGTGT 62.017 66.667 17.64 0.00 0.00 4.49
1496 2484 2.561478 ACGTGTAGCTCCCACAAATT 57.439 45.000 14.66 0.00 33.00 1.82
1553 2541 8.721133 ATTTGGTTTCAACTAAATTACTCCCT 57.279 30.769 7.90 0.00 44.37 4.20
1554 2542 7.754851 TTGGTTTCAACTAAATTACTCCCTC 57.245 36.000 0.00 0.00 0.00 4.30
1555 2543 7.086685 TGGTTTCAACTAAATTACTCCCTCT 57.913 36.000 0.00 0.00 0.00 3.69
1556 2544 6.940298 TGGTTTCAACTAAATTACTCCCTCTG 59.060 38.462 0.00 0.00 0.00 3.35
1557 2545 6.940867 GGTTTCAACTAAATTACTCCCTCTGT 59.059 38.462 0.00 0.00 0.00 3.41
1558 2546 7.447545 GGTTTCAACTAAATTACTCCCTCTGTT 59.552 37.037 0.00 0.00 0.00 3.16
1559 2547 8.504815 GTTTCAACTAAATTACTCCCTCTGTTC 58.495 37.037 0.00 0.00 0.00 3.18
1560 2548 6.708285 TCAACTAAATTACTCCCTCTGTTCC 58.292 40.000 0.00 0.00 0.00 3.62
1561 2549 6.500751 TCAACTAAATTACTCCCTCTGTTCCT 59.499 38.462 0.00 0.00 0.00 3.36
1562 2550 7.676893 TCAACTAAATTACTCCCTCTGTTCCTA 59.323 37.037 0.00 0.00 0.00 2.94
1563 2551 8.319146 CAACTAAATTACTCCCTCTGTTCCTAA 58.681 37.037 0.00 0.00 0.00 2.69
1564 2552 8.445361 ACTAAATTACTCCCTCTGTTCCTAAA 57.555 34.615 0.00 0.00 0.00 1.85
1565 2553 9.059023 ACTAAATTACTCCCTCTGTTCCTAAAT 57.941 33.333 0.00 0.00 0.00 1.40
1573 2561 9.453830 ACTCCCTCTGTTCCTAAATATAATTCT 57.546 33.333 0.00 0.00 0.00 2.40
1604 2592 9.875708 AGAGATTCCAGTATAGAGACTACATTT 57.124 33.333 0.00 0.00 0.00 2.32
1605 2593 9.906660 GAGATTCCAGTATAGAGACTACATTTG 57.093 37.037 0.00 0.00 0.00 2.32
1606 2594 8.865090 AGATTCCAGTATAGAGACTACATTTGG 58.135 37.037 0.00 0.00 0.00 3.28
1607 2595 8.783660 ATTCCAGTATAGAGACTACATTTGGA 57.216 34.615 0.00 0.00 0.00 3.53
1608 2596 8.783660 TTCCAGTATAGAGACTACATTTGGAT 57.216 34.615 0.00 0.00 0.00 3.41
1609 2597 8.183104 TCCAGTATAGAGACTACATTTGGATG 57.817 38.462 0.00 0.00 39.25 3.51
1611 2599 9.078990 CCAGTATAGAGACTACATTTGGATGTA 57.921 37.037 0.00 0.00 44.51 2.29
1621 2609 9.319143 GACTACATTTGGATGTATATAGATGCC 57.681 37.037 8.61 5.51 45.20 4.40
1622 2610 9.051259 ACTACATTTGGATGTATATAGATGCCT 57.949 33.333 8.61 0.00 45.20 4.75
1623 2611 9.896645 CTACATTTGGATGTATATAGATGCCTT 57.103 33.333 8.61 0.00 45.20 4.35
1625 2613 9.592196 ACATTTGGATGTATATAGATGCCTTTT 57.408 29.630 8.61 0.00 44.51 2.27
1630 2618 9.326489 TGGATGTATATAGATGCCTTTTAGAGT 57.674 33.333 8.61 0.00 0.00 3.24
1639 2627 7.676683 AGATGCCTTTTAGAGTATAGGTTCA 57.323 36.000 0.00 0.00 0.00 3.18
1640 2628 7.501844 AGATGCCTTTTAGAGTATAGGTTCAC 58.498 38.462 0.00 0.00 0.00 3.18
1641 2629 6.869206 TGCCTTTTAGAGTATAGGTTCACT 57.131 37.500 0.00 0.00 0.00 3.41
1642 2630 6.875076 TGCCTTTTAGAGTATAGGTTCACTC 58.125 40.000 0.00 0.00 41.25 3.51
1643 2631 6.439375 TGCCTTTTAGAGTATAGGTTCACTCA 59.561 38.462 4.70 0.00 42.99 3.41
1644 2632 7.125811 TGCCTTTTAGAGTATAGGTTCACTCAT 59.874 37.037 4.70 0.00 42.99 2.90
1645 2633 7.988028 GCCTTTTAGAGTATAGGTTCACTCATT 59.012 37.037 4.70 0.00 42.99 2.57
1646 2634 9.892130 CCTTTTAGAGTATAGGTTCACTCATTT 57.108 33.333 4.70 0.00 42.99 2.32
1649 2637 8.718102 TTAGAGTATAGGTTCACTCATTTTGC 57.282 34.615 4.70 0.00 42.99 3.68
1650 2638 6.951971 AGAGTATAGGTTCACTCATTTTGCT 58.048 36.000 4.70 0.00 42.99 3.91
1651 2639 7.044798 AGAGTATAGGTTCACTCATTTTGCTC 58.955 38.462 4.70 0.00 42.99 4.26
1652 2640 6.116126 AGTATAGGTTCACTCATTTTGCTCC 58.884 40.000 0.00 0.00 0.00 4.70
1653 2641 3.228188 AGGTTCACTCATTTTGCTCCA 57.772 42.857 0.00 0.00 0.00 3.86
1654 2642 3.771216 AGGTTCACTCATTTTGCTCCAT 58.229 40.909 0.00 0.00 0.00 3.41
1655 2643 4.922206 AGGTTCACTCATTTTGCTCCATA 58.078 39.130 0.00 0.00 0.00 2.74
1656 2644 5.513233 AGGTTCACTCATTTTGCTCCATAT 58.487 37.500 0.00 0.00 0.00 1.78
1657 2645 5.359009 AGGTTCACTCATTTTGCTCCATATG 59.641 40.000 0.00 0.00 0.00 1.78
1658 2646 5.126061 GGTTCACTCATTTTGCTCCATATGT 59.874 40.000 1.24 0.00 0.00 2.29
1659 2647 6.318648 GGTTCACTCATTTTGCTCCATATGTA 59.681 38.462 1.24 0.00 0.00 2.29
1660 2648 7.412853 GTTCACTCATTTTGCTCCATATGTAG 58.587 38.462 1.24 0.00 0.00 2.74
1661 2649 6.653020 TCACTCATTTTGCTCCATATGTAGT 58.347 36.000 1.24 0.00 0.00 2.73
1662 2650 6.763135 TCACTCATTTTGCTCCATATGTAGTC 59.237 38.462 1.24 0.00 0.00 2.59
1663 2651 6.539826 CACTCATTTTGCTCCATATGTAGTCA 59.460 38.462 1.24 0.00 0.00 3.41
1664 2652 7.066163 CACTCATTTTGCTCCATATGTAGTCAA 59.934 37.037 1.24 2.05 0.00 3.18
1665 2653 7.776969 ACTCATTTTGCTCCATATGTAGTCAAT 59.223 33.333 1.24 0.00 0.00 2.57
1666 2654 9.276590 CTCATTTTGCTCCATATGTAGTCAATA 57.723 33.333 1.24 1.14 0.00 1.90
1667 2655 9.276590 TCATTTTGCTCCATATGTAGTCAATAG 57.723 33.333 1.24 0.00 0.00 1.73
1668 2656 9.060347 CATTTTGCTCCATATGTAGTCAATAGT 57.940 33.333 1.24 0.00 0.00 2.12
1669 2657 8.437360 TTTTGCTCCATATGTAGTCAATAGTG 57.563 34.615 1.24 0.00 0.00 2.74
1670 2658 6.101650 TGCTCCATATGTAGTCAATAGTGG 57.898 41.667 1.24 0.00 0.00 4.00
1671 2659 5.838521 TGCTCCATATGTAGTCAATAGTGGA 59.161 40.000 1.24 0.00 33.77 4.02
1672 2660 6.326323 TGCTCCATATGTAGTCAATAGTGGAA 59.674 38.462 1.24 0.00 34.42 3.53
1673 2661 7.016563 TGCTCCATATGTAGTCAATAGTGGAAT 59.983 37.037 1.24 0.00 34.42 3.01
1674 2662 7.547370 GCTCCATATGTAGTCAATAGTGGAATC 59.453 40.741 1.24 0.00 34.42 2.52
1675 2663 8.727100 TCCATATGTAGTCAATAGTGGAATCT 57.273 34.615 1.24 0.00 32.02 2.40
1676 2664 8.807118 TCCATATGTAGTCAATAGTGGAATCTC 58.193 37.037 1.24 0.00 32.02 2.75
1677 2665 8.811017 CCATATGTAGTCAATAGTGGAATCTCT 58.189 37.037 1.24 0.00 0.00 3.10
1685 2673 9.660180 AGTCAATAGTGGAATCTCTTAAAAGAC 57.340 33.333 0.00 0.00 0.00 3.01
1686 2674 9.660180 GTCAATAGTGGAATCTCTTAAAAGACT 57.340 33.333 0.00 0.00 0.00 3.24
1714 2702 1.066143 ACGGAGGGAGTAGTTTGCATG 60.066 52.381 0.00 0.00 0.00 4.06
1742 2730 0.535335 TCACCTGATCCAGTAACCGC 59.465 55.000 0.00 0.00 0.00 5.68
1749 2737 2.028839 TGATCCAGTAACCGCGAAGAAA 60.029 45.455 8.23 0.00 0.00 2.52
1763 2751 5.116528 CCGCGAAGAAATTTAGGTTCAAAAC 59.883 40.000 8.23 0.00 0.00 2.43
1774 2763 3.976015 AGGTTCAAAACTTCCCACTTCA 58.024 40.909 0.00 0.00 0.00 3.02
1786 2775 6.231211 ACTTCCCACTTCACAGTAAATGTAG 58.769 40.000 0.00 0.00 41.41 2.74
1790 2779 6.042781 TCCCACTTCACAGTAAATGTAGAGTT 59.957 38.462 0.00 0.00 41.41 3.01
1801 2791 9.431887 CAGTAAATGTAGAGTTACCTAAGCAAA 57.568 33.333 6.60 0.00 33.91 3.68
1958 2948 5.815233 CTGTATCAGGAAGGGACACATAT 57.185 43.478 0.00 0.00 0.00 1.78
1977 2967 7.442364 ACACATATTGTTCAAGATATTCCCGAG 59.558 37.037 0.00 0.00 33.09 4.63
2011 3001 9.278734 GTTAGCTATCAAATTCTGTTTAACTGC 57.721 33.333 0.00 0.00 0.00 4.40
2019 3009 7.701924 TCAAATTCTGTTTAACTGCAAGAGTTG 59.298 33.333 0.35 2.10 45.05 3.16
2055 3045 3.536956 TCCACTTGAACTTCGTTCTGT 57.463 42.857 8.06 4.76 42.39 3.41
2183 3173 0.546122 TTCCTGTCTGTTGTGCCTGT 59.454 50.000 0.00 0.00 0.00 4.00
2203 3194 7.014711 TGCCTGTTTCATACACATTAGGAAAAA 59.985 33.333 0.00 0.00 30.58 1.94
2217 3208 8.784043 ACATTAGGAAAAACATACTGTCTTCAC 58.216 33.333 0.00 0.00 25.75 3.18
2258 3249 9.823647 CATAATATGTTAGAACTCTGGTCTTGT 57.176 33.333 0.00 0.00 0.00 3.16
2268 3259 6.778559 AGAACTCTGGTCTTGTAGGTATATCC 59.221 42.308 0.00 0.00 0.00 2.59
2275 3266 4.001652 TCTTGTAGGTATATCCGAGCTCG 58.998 47.826 29.06 29.06 41.99 5.03
2386 3377 7.675270 ATGTATGTATAACGACACGAAGAAC 57.325 36.000 0.00 0.00 30.52 3.01
2487 3478 3.596214 TCGGTCTTCCTTGCTGTAAATC 58.404 45.455 0.00 0.00 0.00 2.17
2488 3479 2.678336 CGGTCTTCCTTGCTGTAAATCC 59.322 50.000 0.00 0.00 0.00 3.01
2489 3480 3.017442 GGTCTTCCTTGCTGTAAATCCC 58.983 50.000 0.00 0.00 0.00 3.85
2490 3481 3.561313 GGTCTTCCTTGCTGTAAATCCCA 60.561 47.826 0.00 0.00 0.00 4.37
2491 3482 4.079253 GTCTTCCTTGCTGTAAATCCCAA 58.921 43.478 0.00 0.00 0.00 4.12
2492 3483 4.156739 GTCTTCCTTGCTGTAAATCCCAAG 59.843 45.833 0.00 0.00 35.61 3.61
2493 3484 3.806949 TCCTTGCTGTAAATCCCAAGT 57.193 42.857 0.00 0.00 34.38 3.16
2494 3485 4.112634 TCCTTGCTGTAAATCCCAAGTT 57.887 40.909 0.00 0.00 34.38 2.66
2560 3552 7.843490 AATCCTGATGCATTTGATTTCTTTG 57.157 32.000 0.00 0.00 0.00 2.77
2641 3633 3.617263 ACGAGCAAGGTTAGCTTTATTCG 59.383 43.478 15.24 15.24 43.58 3.34
2670 3662 5.779922 TGTTCTAAGCTGTACTGTCGATTT 58.220 37.500 1.46 0.00 0.00 2.17
2824 3816 6.774673 TCCAACTGAGGTTCAACACATATAA 58.225 36.000 0.00 0.00 32.73 0.98
2828 3820 7.004555 ACTGAGGTTCAACACATATAACTGA 57.995 36.000 0.00 0.00 0.00 3.41
2829 3821 7.099764 ACTGAGGTTCAACACATATAACTGAG 58.900 38.462 0.00 0.00 0.00 3.35
2830 3822 6.406370 TGAGGTTCAACACATATAACTGAGG 58.594 40.000 0.00 0.00 0.00 3.86
2831 3823 6.013725 TGAGGTTCAACACATATAACTGAGGT 60.014 38.462 0.00 0.00 0.00 3.85
2835 3827 7.174253 GGTTCAACACATATAACTGAGGTTCAA 59.826 37.037 0.00 0.00 36.92 2.69
2838 3830 7.387673 TCAACACATATAACTGAGGTTCAACTG 59.612 37.037 0.00 0.00 36.92 3.16
2878 3884 9.724839 GTCATTTACTTTGCTTTTGTGTACTTA 57.275 29.630 0.00 0.00 0.00 2.24
2963 3969 6.199937 AGTAATTTGCATGTGATTCACTCC 57.800 37.500 17.26 6.65 35.11 3.85
3025 4031 6.664816 AGATATGTGTGTGAATTTGGTGGATT 59.335 34.615 0.00 0.00 0.00 3.01
3053 4070 0.326143 TCCCTCCATTCATCCGTCCA 60.326 55.000 0.00 0.00 0.00 4.02
3060 4077 5.536161 CCTCCATTCATCCGTCCAAAAATAT 59.464 40.000 0.00 0.00 0.00 1.28
3065 4082 7.548780 CCATTCATCCGTCCAAAAATATTTGTT 59.451 33.333 0.39 0.00 43.59 2.83
3407 4424 9.657419 AGTACTACAGTCTAGTCTTAGAACTTC 57.343 37.037 0.00 0.00 37.65 3.01
3436 4453 8.607459 CAAAGTGATGAATACTGGTGATAAGAC 58.393 37.037 0.00 0.00 0.00 3.01
3642 4668 0.321653 GGTCAAGCTGTTCGGGTCAT 60.322 55.000 0.00 0.00 0.00 3.06
3652 4678 4.489771 CGGGTCATGAGTGCCCCC 62.490 72.222 13.00 10.59 38.00 5.40
3720 4746 3.096852 TCTCCTCTGATAAGCCGTCAAA 58.903 45.455 0.00 0.00 0.00 2.69
4284 5310 5.972698 TCCCTTATATAGACCTTGTAGGCA 58.027 41.667 0.00 0.00 39.63 4.75
4419 5448 4.770795 CTGGACTCCTAAATGGGTACAAG 58.229 47.826 0.00 0.00 32.12 3.16
4447 5476 3.808618 GCATAGCTGGACTCCTAAATGGG 60.809 52.174 0.00 0.00 36.20 4.00
4534 5579 6.049955 TGAAGTATAGTCTGTTTCCCCTTG 57.950 41.667 0.00 0.00 0.00 3.61
4690 5736 4.357918 AGAGCCATTCCATACACCATAC 57.642 45.455 0.00 0.00 0.00 2.39
5081 6134 2.163010 CAGACATTCCAGATGTTGTGGC 59.837 50.000 0.00 0.00 34.77 5.01
5082 6135 2.161855 GACATTCCAGATGTTGTGGCA 58.838 47.619 0.00 0.00 34.77 4.92
5416 6470 3.133183 TCAGTTAAACTTTGCCAAACCCC 59.867 43.478 0.00 0.00 0.00 4.95
5456 6510 3.531934 AATGCTAAATTTGAGCCTGGC 57.468 42.857 11.65 11.65 39.30 4.85
6134 7282 3.815401 ACAGTCCACATGCTTTCAGTTAC 59.185 43.478 0.00 0.00 0.00 2.50
6237 7389 5.584649 TCTGAACAGTTCACTTACAAAGGTG 59.415 40.000 12.24 0.00 35.46 4.00
6357 7509 1.998315 CTCATATACATCAGCTGCGGC 59.002 52.381 10.33 10.33 39.06 6.53
6394 7546 4.559862 AAGGTGACAGTTGCTAGCTTAT 57.440 40.909 17.23 0.00 0.00 1.73
6611 8165 8.021396 GTCCTTATGTTTTACTGCAACCTTTAG 58.979 37.037 0.00 0.00 0.00 1.85
6664 8221 1.464734 AGCTCTAGTACTGCGCAAGA 58.535 50.000 13.05 10.28 43.02 3.02
6693 8250 1.215423 AGTTGCTCTGACCAACCCTTT 59.785 47.619 11.25 0.00 42.63 3.11
6769 8328 3.951563 AGATAGTCAGGAGCAGTCTCT 57.048 47.619 0.00 0.00 39.31 3.10
6770 8329 3.820557 AGATAGTCAGGAGCAGTCTCTC 58.179 50.000 0.00 0.00 39.31 3.20
6885 8444 2.928334 AGCTAAATCTGCCTGTGATGG 58.072 47.619 0.00 0.00 0.00 3.51
7016 8576 9.060347 TGCCTTTTCTATTATGATGATTCAGAC 57.940 33.333 0.00 0.00 34.73 3.51
7039 8599 3.339042 CTCATGGTCCATGGGCCT 58.661 61.111 34.72 18.36 41.66 5.19
7175 8735 9.746711 AACAAAAACAAAAACAAAAACAAAAGC 57.253 22.222 0.00 0.00 0.00 3.51
7176 8736 8.104530 ACAAAAACAAAAACAAAAACAAAAGCG 58.895 25.926 0.00 0.00 0.00 4.68
7177 8737 7.971004 AAAACAAAAACAAAAACAAAAGCGA 57.029 24.000 0.00 0.00 0.00 4.93
7178 8738 7.971004 AAACAAAAACAAAAACAAAAGCGAA 57.029 24.000 0.00 0.00 0.00 4.70
7179 8739 7.971004 AACAAAAACAAAAACAAAAGCGAAA 57.029 24.000 0.00 0.00 0.00 3.46
7180 8740 7.601881 ACAAAAACAAAAACAAAAGCGAAAG 57.398 28.000 0.00 0.00 0.00 2.62
7232 8792 1.555075 AGCCAAGCCATCGAAAGTCTA 59.445 47.619 0.00 0.00 0.00 2.59
7233 8793 1.936547 GCCAAGCCATCGAAAGTCTAG 59.063 52.381 0.00 0.00 0.00 2.43
7256 8818 4.437390 GCCAGACAAACGATTTGGTCATAG 60.437 45.833 12.79 0.00 44.81 2.23
7267 8830 4.380843 TTTGGTCATAGGAAAAGGCTGA 57.619 40.909 0.00 0.00 0.00 4.26
7293 8856 0.960364 CACGGGCTGTGGTGCTAATT 60.960 55.000 18.87 0.00 45.21 1.40
7328 8891 1.447314 GTTTACCGCCGACCCAGAG 60.447 63.158 0.00 0.00 0.00 3.35
7336 8899 1.323271 GCCGACCCAGAGAGTGATGA 61.323 60.000 0.00 0.00 0.00 2.92
7344 8907 1.067283 CAGAGAGTGATGAGTTGCCGT 60.067 52.381 0.00 0.00 0.00 5.68
7362 8925 0.521735 GTGAGGAATTTCACACCGGC 59.478 55.000 0.00 0.00 45.32 6.13
7371 8934 1.440938 TTCACACCGGCCAAACGAAG 61.441 55.000 0.00 0.00 35.47 3.79
7398 8961 7.020827 TCAACTCAAGGATCTCAATTTAGGT 57.979 36.000 0.00 0.00 0.00 3.08
7425 8988 9.653287 CAAGGTATTTGTAGAAACTCACATAGA 57.347 33.333 0.00 0.00 31.92 1.98
7462 9025 4.080863 AGGAACTTACATTCTGTGCTAGGG 60.081 45.833 0.00 0.00 27.25 3.53
7495 9058 5.475564 GGCTTATTCCCTTCTTGTGTAAACA 59.524 40.000 0.00 0.00 0.00 2.83
7500 9063 4.469657 TCCCTTCTTGTGTAAACAAGCAT 58.530 39.130 19.40 0.00 44.82 3.79
7558 9121 1.522580 GAGCGCAAGGGGACTGATC 60.523 63.158 11.47 0.00 42.68 2.92
7562 9125 0.467384 CGCAAGGGGACTGATCTCAT 59.533 55.000 0.00 0.00 42.68 2.90
7563 9126 1.809271 CGCAAGGGGACTGATCTCATG 60.809 57.143 0.00 0.00 42.68 3.07
7564 9127 1.211457 GCAAGGGGACTGATCTCATGT 59.789 52.381 0.00 0.00 42.68 3.21
7595 9158 2.292845 CCAAATTTTGGCCGTGCATTTT 59.707 40.909 14.96 0.00 45.17 1.82
7596 9159 3.298317 CAAATTTTGGCCGTGCATTTTG 58.702 40.909 0.00 0.00 0.00 2.44
7604 9167 1.285641 CGTGCATTTTGGTTCGCCT 59.714 52.632 0.00 0.00 38.36 5.52
7641 9364 4.693566 AGAGCGTAGACTATCTGCAGTATC 59.306 45.833 14.67 7.33 0.00 2.24
7645 9368 5.064198 GCGTAGACTATCTGCAGTATCTAGG 59.936 48.000 14.67 19.18 0.00 3.02
7646 9369 5.583061 CGTAGACTATCTGCAGTATCTAGGG 59.417 48.000 14.67 7.85 0.00 3.53
7648 9371 5.815581 AGACTATCTGCAGTATCTAGGGAG 58.184 45.833 14.67 2.40 0.00 4.30
7661 9384 0.615331 TAGGGAGAGGCAGCAAAGTG 59.385 55.000 0.00 0.00 0.00 3.16
7662 9385 2.338785 GGGAGAGGCAGCAAAGTGC 61.339 63.158 0.00 0.00 45.46 4.40
7679 9578 2.919602 AGTGCCCCTTCTCCTCATTTTA 59.080 45.455 0.00 0.00 0.00 1.52
7680 9579 3.529319 AGTGCCCCTTCTCCTCATTTTAT 59.471 43.478 0.00 0.00 0.00 1.40
7681 9580 3.633986 GTGCCCCTTCTCCTCATTTTATG 59.366 47.826 0.00 0.00 0.00 1.90
7682 9581 3.269381 TGCCCCTTCTCCTCATTTTATGT 59.731 43.478 0.00 0.00 0.00 2.29
7684 9583 5.044476 TGCCCCTTCTCCTCATTTTATGTTA 60.044 40.000 0.00 0.00 0.00 2.41
7689 9626 8.345565 CCCTTCTCCTCATTTTATGTTATTTCG 58.654 37.037 0.00 0.00 0.00 3.46
7707 9644 1.004161 TCGACCATCATTTTCTGCCCA 59.996 47.619 0.00 0.00 0.00 5.36
7750 9690 8.099364 TGGAGACAAAGTTGTAAATTGAGATC 57.901 34.615 0.00 0.00 42.43 2.75
7772 9712 9.614792 AGATCATTTTGTATCTTTAGGGTGTAC 57.385 33.333 0.00 0.00 0.00 2.90
7773 9713 9.614792 GATCATTTTGTATCTTTAGGGTGTACT 57.385 33.333 0.00 0.00 0.00 2.73
7774 9714 9.614792 ATCATTTTGTATCTTTAGGGTGTACTC 57.385 33.333 0.00 0.00 0.00 2.59
7782 9722 4.125239 GGGTGTACTCCCTCCGTT 57.875 61.111 23.22 0.00 43.85 4.44
7783 9723 1.895966 GGGTGTACTCCCTCCGTTC 59.104 63.158 23.22 0.00 43.85 3.95
7784 9724 1.611474 GGGTGTACTCCCTCCGTTCC 61.611 65.000 23.22 0.00 43.85 3.62
7785 9725 0.614134 GGTGTACTCCCTCCGTTCCT 60.614 60.000 2.33 0.00 0.00 3.36
7786 9726 1.341383 GGTGTACTCCCTCCGTTCCTA 60.341 57.143 2.33 0.00 0.00 2.94
7787 9727 2.450476 GTGTACTCCCTCCGTTCCTAA 58.550 52.381 0.00 0.00 0.00 2.69
7788 9728 2.827921 GTGTACTCCCTCCGTTCCTAAA 59.172 50.000 0.00 0.00 0.00 1.85
7789 9729 3.450096 GTGTACTCCCTCCGTTCCTAAAT 59.550 47.826 0.00 0.00 0.00 1.40
7790 9730 4.646492 GTGTACTCCCTCCGTTCCTAAATA 59.354 45.833 0.00 0.00 0.00 1.40
7791 9731 5.303845 GTGTACTCCCTCCGTTCCTAAATAT 59.696 44.000 0.00 0.00 0.00 1.28
7792 9732 6.491403 GTGTACTCCCTCCGTTCCTAAATATA 59.509 42.308 0.00 0.00 0.00 0.86
7793 9733 7.014615 GTGTACTCCCTCCGTTCCTAAATATAA 59.985 40.741 0.00 0.00 0.00 0.98
7794 9734 7.564660 TGTACTCCCTCCGTTCCTAAATATAAA 59.435 37.037 0.00 0.00 0.00 1.40
7795 9735 7.628501 ACTCCCTCCGTTCCTAAATATAAAT 57.371 36.000 0.00 0.00 0.00 1.40
7796 9736 7.677892 ACTCCCTCCGTTCCTAAATATAAATC 58.322 38.462 0.00 0.00 0.00 2.17
7797 9737 7.513091 ACTCCCTCCGTTCCTAAATATAAATCT 59.487 37.037 0.00 0.00 0.00 2.40
7798 9738 8.271398 TCCCTCCGTTCCTAAATATAAATCTT 57.729 34.615 0.00 0.00 0.00 2.40
7799 9739 8.720537 TCCCTCCGTTCCTAAATATAAATCTTT 58.279 33.333 0.00 0.00 0.00 2.52
7831 9771 8.839310 ATTTCAATATGGACTACATACAGAGC 57.161 34.615 0.00 0.00 44.41 4.09
7832 9772 6.976934 TCAATATGGACTACATACAGAGCA 57.023 37.500 0.00 0.00 44.41 4.26
7833 9773 7.360113 TCAATATGGACTACATACAGAGCAA 57.640 36.000 0.00 0.00 44.41 3.91
7834 9774 7.791029 TCAATATGGACTACATACAGAGCAAA 58.209 34.615 0.00 0.00 44.41 3.68
7835 9775 8.264347 TCAATATGGACTACATACAGAGCAAAA 58.736 33.333 0.00 0.00 44.41 2.44
7836 9776 9.060347 CAATATGGACTACATACAGAGCAAAAT 57.940 33.333 0.00 0.00 44.41 1.82
7837 9777 6.932356 ATGGACTACATACAGAGCAAAATG 57.068 37.500 0.00 0.00 38.26 2.32
7838 9778 4.635765 TGGACTACATACAGAGCAAAATGC 59.364 41.667 0.00 0.00 45.46 3.56
7839 9779 7.888812 ATGGACTACATACAGAGCAAAATGCG 61.889 42.308 0.00 0.00 43.05 4.73
7851 9791 4.083581 GCAAAATGCGTGAATCTACACT 57.916 40.909 0.00 0.00 38.47 3.55
7852 9792 4.091424 GCAAAATGCGTGAATCTACACTC 58.909 43.478 0.00 0.00 38.47 3.51
7853 9793 4.142816 GCAAAATGCGTGAATCTACACTCT 60.143 41.667 0.00 0.00 38.47 3.24
7854 9794 5.063438 GCAAAATGCGTGAATCTACACTCTA 59.937 40.000 0.00 0.00 38.47 2.43
7855 9795 6.402118 GCAAAATGCGTGAATCTACACTCTAA 60.402 38.462 0.00 0.00 38.47 2.10
7856 9796 7.518161 CAAAATGCGTGAATCTACACTCTAAA 58.482 34.615 0.00 0.00 38.47 1.85
7857 9797 7.849804 AAATGCGTGAATCTACACTCTAAAT 57.150 32.000 0.00 0.00 38.47 1.40
7858 9798 7.849804 AATGCGTGAATCTACACTCTAAATT 57.150 32.000 0.00 0.00 38.47 1.82
7859 9799 6.647212 TGCGTGAATCTACACTCTAAATTG 57.353 37.500 0.00 0.00 38.47 2.32
7860 9800 6.163476 TGCGTGAATCTACACTCTAAATTGT 58.837 36.000 0.00 0.00 38.47 2.71
7861 9801 6.090763 TGCGTGAATCTACACTCTAAATTGTG 59.909 38.462 0.00 0.00 38.47 3.33
7863 9803 7.667283 CGTGAATCTACACTCTAAATTGTGTC 58.333 38.462 2.82 0.00 44.94 3.67
7864 9804 7.542477 CGTGAATCTACACTCTAAATTGTGTCT 59.458 37.037 2.82 0.00 44.94 3.41
7865 9805 9.856488 GTGAATCTACACTCTAAATTGTGTCTA 57.144 33.333 2.82 0.00 44.94 2.59
7924 9864 4.426736 AAGACTTACTTTTGGGAACGGA 57.573 40.909 0.00 0.00 34.94 4.69
7925 9865 4.004196 AGACTTACTTTTGGGAACGGAG 57.996 45.455 0.00 0.00 0.00 4.63
7926 9866 3.072211 GACTTACTTTTGGGAACGGAGG 58.928 50.000 0.00 0.00 0.00 4.30
7927 9867 2.224695 ACTTACTTTTGGGAACGGAGGG 60.225 50.000 0.00 0.00 0.00 4.30
7928 9868 1.732117 TACTTTTGGGAACGGAGGGA 58.268 50.000 0.00 0.00 0.00 4.20
7929 9869 0.400594 ACTTTTGGGAACGGAGGGAG 59.599 55.000 0.00 0.00 0.00 4.30
7930 9870 0.400594 CTTTTGGGAACGGAGGGAGT 59.599 55.000 0.00 0.00 0.00 3.85
7931 9871 1.626825 CTTTTGGGAACGGAGGGAGTA 59.373 52.381 0.00 0.00 0.00 2.59
7932 9872 1.961133 TTTGGGAACGGAGGGAGTAT 58.039 50.000 0.00 0.00 0.00 2.12
7933 9873 2.852714 TTGGGAACGGAGGGAGTATA 57.147 50.000 0.00 0.00 0.00 1.47
7934 9874 3.339713 TTGGGAACGGAGGGAGTATAT 57.660 47.619 0.00 0.00 0.00 0.86
7935 9875 2.885616 TGGGAACGGAGGGAGTATATC 58.114 52.381 0.00 0.00 0.00 1.63
7936 9876 2.449730 TGGGAACGGAGGGAGTATATCT 59.550 50.000 0.00 0.00 0.00 1.98
7937 9877 3.116862 TGGGAACGGAGGGAGTATATCTT 60.117 47.826 0.00 0.00 0.00 2.40
7938 9878 3.902467 GGGAACGGAGGGAGTATATCTTT 59.098 47.826 0.00 0.00 0.00 2.52
7939 9879 4.347292 GGGAACGGAGGGAGTATATCTTTT 59.653 45.833 0.00 0.00 0.00 2.27
7940 9880 5.298347 GGAACGGAGGGAGTATATCTTTTG 58.702 45.833 0.00 0.00 0.00 2.44
7941 9881 5.163332 GGAACGGAGGGAGTATATCTTTTGT 60.163 44.000 0.00 0.00 0.00 2.83
7980 9920 3.958798 AGCATGTATCTACCACCGTTAGT 59.041 43.478 0.00 0.00 0.00 2.24
7993 9933 1.678598 CGTTAGTATGTGGCCGGGGA 61.679 60.000 2.18 0.00 0.00 4.81
8004 9944 3.457263 CCGGGGAAAATTGGGGCG 61.457 66.667 0.00 0.00 0.00 6.13
8023 9963 2.119457 CGCACAAAGAGCAGGTTTTTC 58.881 47.619 0.00 0.00 0.00 2.29
8034 9974 2.613691 CAGGTTTTTCAGATGCATGCC 58.386 47.619 16.68 0.00 0.00 4.40
8056 9996 3.875727 CTCCTCCAATGCAACATCTAGTG 59.124 47.826 0.00 0.00 0.00 2.74
8098 10061 4.508662 CCACCTCACCTTGAAACTCTATC 58.491 47.826 0.00 0.00 0.00 2.08
8108 10071 7.010552 CACCTTGAAACTCTATCTTATTCCACG 59.989 40.741 0.00 0.00 0.00 4.94
8109 10072 6.018669 CCTTGAAACTCTATCTTATTCCACGC 60.019 42.308 0.00 0.00 0.00 5.34
8112 10075 7.103641 TGAAACTCTATCTTATTCCACGCTTT 58.896 34.615 0.00 0.00 0.00 3.51
8113 10076 8.255206 TGAAACTCTATCTTATTCCACGCTTTA 58.745 33.333 0.00 0.00 0.00 1.85
8116 10079 7.379750 ACTCTATCTTATTCCACGCTTTATCC 58.620 38.462 0.00 0.00 0.00 2.59
8118 10081 7.732025 TCTATCTTATTCCACGCTTTATCCAA 58.268 34.615 0.00 0.00 0.00 3.53
8122 10085 0.034863 TCCACGCTTTATCCAACCCC 60.035 55.000 0.00 0.00 0.00 4.95
8123 10086 0.322997 CCACGCTTTATCCAACCCCA 60.323 55.000 0.00 0.00 0.00 4.96
8124 10087 1.540267 CACGCTTTATCCAACCCCAA 58.460 50.000 0.00 0.00 0.00 4.12
8160 10123 4.841443 ACACCCGTTTCCAAATTAGTTC 57.159 40.909 0.00 0.00 0.00 3.01
8175 10138 8.503196 CCAAATTAGTTCAAATTTTAGGGTTGC 58.497 33.333 0.00 0.00 37.03 4.17
8177 10140 4.617253 AGTTCAAATTTTAGGGTTGCCC 57.383 40.909 0.00 0.00 45.90 5.36
8191 10154 1.203758 GTTGCCCTAAATTCAACCCCG 59.796 52.381 0.00 0.00 35.36 5.73
8213 10176 7.414429 CCCCGTAAAAGCTTTAACCAAGTATAC 60.414 40.741 13.10 6.94 34.56 1.47
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 8.190122 GTGATATGTATCAAAAAGTGGCATCAA 58.810 33.333 4.39 0.00 43.65 2.57
59 62 4.142534 GCTCATGTGCATGTTATCACACTT 60.143 41.667 14.66 0.00 44.74 3.16
71 74 4.703575 ACAATGTAGAAAGCTCATGTGCAT 59.296 37.500 20.92 7.11 34.99 3.96
119 122 8.979574 CATTTAGGAGATGGTTAATTAGTCGAC 58.020 37.037 7.70 7.70 0.00 4.20
129 132 9.527157 TTGTTTCAATCATTTAGGAGATGGTTA 57.473 29.630 0.00 0.00 0.00 2.85
132 135 8.689061 TGATTGTTTCAATCATTTAGGAGATGG 58.311 33.333 17.54 0.00 32.21 3.51
166 169 6.057533 CCATAGATGAGAGTGTTTATTGCCA 58.942 40.000 0.00 0.00 0.00 4.92
167 170 6.017605 CACCATAGATGAGAGTGTTTATTGCC 60.018 42.308 0.00 0.00 0.00 4.52
177 180 6.445451 AATTATGCCACCATAGATGAGAGT 57.555 37.500 0.00 0.00 35.47 3.24
183 186 9.986157 ATCTTCATAAATTATGCCACCATAGAT 57.014 29.630 8.06 5.14 35.47 1.98
350 377 3.529634 TTTACATTTGCTCCGAACACG 57.470 42.857 0.00 0.00 0.00 4.49
374 401 4.039124 AGCATGTTGAAAGGTCCGATTTTT 59.961 37.500 0.00 0.00 0.00 1.94
430 464 8.542926 TCAATGATCCTGATAGACAAAGAAGAA 58.457 33.333 0.00 0.00 0.00 2.52
444 478 5.733676 TCGTGAAGAAATCAATGATCCTGA 58.266 37.500 0.00 0.00 40.50 3.86
445 479 6.426980 TTCGTGAAGAAATCAATGATCCTG 57.573 37.500 0.00 0.00 40.50 3.86
447 481 8.693542 AATTTTCGTGAAGAAATCAATGATCC 57.306 30.769 0.00 0.00 46.98 3.36
448 482 9.345517 TGAATTTTCGTGAAGAAATCAATGATC 57.654 29.630 0.00 0.00 46.98 2.92
449 483 9.865321 ATGAATTTTCGTGAAGAAATCAATGAT 57.135 25.926 2.29 0.00 46.98 2.45
454 488 9.558648 CACATATGAATTTTCGTGAAGAAATCA 57.441 29.630 10.38 0.00 46.98 2.57
455 489 9.773328 TCACATATGAATTTTCGTGAAGAAATC 57.227 29.630 10.38 0.00 46.98 2.17
501 536 7.881142 TGGGGAAATAGCATAATATTGTTTCG 58.119 34.615 0.00 0.00 0.00 3.46
506 542 9.480053 CAAACTTGGGGAAATAGCATAATATTG 57.520 33.333 0.00 0.00 0.00 1.90
508 544 9.605951 ATCAAACTTGGGGAAATAGCATAATAT 57.394 29.630 0.00 0.00 0.00 1.28
528 564 6.472163 CACAACCGCCTAAATGAATATCAAAC 59.528 38.462 0.00 0.00 0.00 2.93
602 640 4.365514 TGACATGAAGGGAGTAGCAAAA 57.634 40.909 0.00 0.00 0.00 2.44
620 658 4.142924 TGTGTGCATGTCGTATTCATTGAC 60.143 41.667 0.00 0.00 0.00 3.18
651 689 6.509418 TCTAATTTATGGTCAAAGTGCACC 57.491 37.500 14.63 0.00 0.00 5.01
705 743 9.624697 CTTCTTTCGAATTTGAATTCAATGGTA 57.375 29.630 21.10 7.21 43.85 3.25
735 774 7.867305 TGTGGCCTAAAAATTATACGATTGA 57.133 32.000 3.32 0.00 0.00 2.57
736 775 8.918961 TTTGTGGCCTAAAAATTATACGATTG 57.081 30.769 3.32 0.00 0.00 2.67
740 779 7.274686 CACCTTTTGTGGCCTAAAAATTATACG 59.725 37.037 15.91 5.88 41.52 3.06
751 790 0.184933 AGTGCACCTTTTGTGGCCTA 59.815 50.000 14.63 0.00 45.55 3.93
805 1089 6.334237 TCCCTTCATTCCAATTAATAGGGCTA 59.666 38.462 9.87 0.00 35.77 3.93
806 1090 5.136048 TCCCTTCATTCCAATTAATAGGGCT 59.864 40.000 9.87 0.00 35.77 5.19
815 1543 8.899887 TCTTTTCTATTCCCTTCATTCCAATT 57.100 30.769 0.00 0.00 0.00 2.32
834 1562 7.427214 ACATATAGCCGTTCTACTCTCTTTTC 58.573 38.462 0.00 0.00 0.00 2.29
896 1626 8.421784 TGATTTTTCAGTAGTGTCTTACTGTCT 58.578 33.333 11.61 0.00 46.75 3.41
912 1642 7.416022 GCTTGGATATGAGACTGATTTTTCAG 58.584 38.462 1.55 1.55 43.03 3.02
913 1643 6.037500 CGCTTGGATATGAGACTGATTTTTCA 59.962 38.462 0.00 0.00 0.00 2.69
914 1644 6.425504 CGCTTGGATATGAGACTGATTTTTC 58.574 40.000 0.00 0.00 0.00 2.29
916 1646 4.274459 GCGCTTGGATATGAGACTGATTTT 59.726 41.667 0.00 0.00 0.00 1.82
917 1647 3.812053 GCGCTTGGATATGAGACTGATTT 59.188 43.478 0.00 0.00 0.00 2.17
918 1648 3.181462 TGCGCTTGGATATGAGACTGATT 60.181 43.478 9.73 0.00 0.00 2.57
919 1649 2.366590 TGCGCTTGGATATGAGACTGAT 59.633 45.455 9.73 0.00 0.00 2.90
920 1650 1.756538 TGCGCTTGGATATGAGACTGA 59.243 47.619 9.73 0.00 0.00 3.41
921 1651 2.229675 TGCGCTTGGATATGAGACTG 57.770 50.000 9.73 0.00 0.00 3.51
962 1692 2.301738 GGGAAGAGGGGTGTGGAGG 61.302 68.421 0.00 0.00 0.00 4.30
963 1693 2.660064 CGGGAAGAGGGGTGTGGAG 61.660 68.421 0.00 0.00 0.00 3.86
964 1694 2.606519 CGGGAAGAGGGGTGTGGA 60.607 66.667 0.00 0.00 0.00 4.02
965 1695 4.410400 GCGGGAAGAGGGGTGTGG 62.410 72.222 0.00 0.00 0.00 4.17
1050 1780 2.960170 GTGGTAGTGAGTCGCGGT 59.040 61.111 6.13 0.00 0.00 5.68
1056 2039 1.975407 CCGGGTCGTGGTAGTGAGT 60.975 63.158 0.00 0.00 0.00 3.41
1057 2040 2.882876 CCGGGTCGTGGTAGTGAG 59.117 66.667 0.00 0.00 0.00 3.51
1418 2401 2.417719 GTGAGCACTGAAGAAATCCGT 58.582 47.619 0.00 0.00 0.00 4.69
1434 2417 2.917971 GTGAAGTCTTCGATTCCGTGAG 59.082 50.000 8.06 0.00 37.05 3.51
1435 2418 2.352421 GGTGAAGTCTTCGATTCCGTGA 60.352 50.000 8.06 0.00 37.05 4.35
1482 2470 4.261801 GTGCTAGAAATTTGTGGGAGCTA 58.738 43.478 9.27 0.00 0.00 3.32
1547 2535 9.453830 AGAATTATATTTAGGAACAGAGGGAGT 57.546 33.333 0.00 0.00 0.00 3.85
1578 2566 9.875708 AAATGTAGTCTCTATACTGGAATCTCT 57.124 33.333 0.00 0.00 0.00 3.10
1579 2567 9.906660 CAAATGTAGTCTCTATACTGGAATCTC 57.093 37.037 0.00 0.00 0.00 2.75
1580 2568 8.865090 CCAAATGTAGTCTCTATACTGGAATCT 58.135 37.037 0.00 0.00 0.00 2.40
1581 2569 8.861086 TCCAAATGTAGTCTCTATACTGGAATC 58.139 37.037 0.00 0.00 27.88 2.52
1582 2570 8.783660 TCCAAATGTAGTCTCTATACTGGAAT 57.216 34.615 0.00 0.00 27.88 3.01
1583 2571 8.642432 CATCCAAATGTAGTCTCTATACTGGAA 58.358 37.037 8.86 0.00 32.17 3.53
1584 2572 7.785028 ACATCCAAATGTAGTCTCTATACTGGA 59.215 37.037 0.00 0.00 44.38 3.86
1585 2573 7.957002 ACATCCAAATGTAGTCTCTATACTGG 58.043 38.462 0.00 0.00 44.38 4.00
1604 2592 9.326489 ACTCTAAAAGGCATCTATATACATCCA 57.674 33.333 0.00 0.00 0.00 3.41
1613 2601 9.381038 TGAACCTATACTCTAAAAGGCATCTAT 57.619 33.333 0.00 0.00 31.98 1.98
1614 2602 8.639761 GTGAACCTATACTCTAAAAGGCATCTA 58.360 37.037 0.00 0.00 31.98 1.98
1615 2603 7.345914 AGTGAACCTATACTCTAAAAGGCATCT 59.654 37.037 0.00 0.00 31.98 2.90
1616 2604 7.501844 AGTGAACCTATACTCTAAAAGGCATC 58.498 38.462 0.00 0.00 31.98 3.91
1617 2605 7.125811 TGAGTGAACCTATACTCTAAAAGGCAT 59.874 37.037 0.00 0.00 42.86 4.40
1618 2606 6.439375 TGAGTGAACCTATACTCTAAAAGGCA 59.561 38.462 0.00 0.00 42.86 4.75
1619 2607 6.875076 TGAGTGAACCTATACTCTAAAAGGC 58.125 40.000 0.00 0.00 42.86 4.35
1620 2608 9.892130 AAATGAGTGAACCTATACTCTAAAAGG 57.108 33.333 0.00 0.00 42.86 3.11
1623 2611 9.162764 GCAAAATGAGTGAACCTATACTCTAAA 57.837 33.333 0.00 0.00 42.86 1.85
1624 2612 8.540388 AGCAAAATGAGTGAACCTATACTCTAA 58.460 33.333 0.00 0.00 42.86 2.10
1625 2613 8.079211 AGCAAAATGAGTGAACCTATACTCTA 57.921 34.615 0.00 0.00 42.86 2.43
1626 2614 6.951971 AGCAAAATGAGTGAACCTATACTCT 58.048 36.000 0.00 0.00 42.86 3.24
1627 2615 6.258947 GGAGCAAAATGAGTGAACCTATACTC 59.741 42.308 0.00 0.00 42.77 2.59
1628 2616 6.116126 GGAGCAAAATGAGTGAACCTATACT 58.884 40.000 0.00 0.00 0.00 2.12
1629 2617 5.880332 TGGAGCAAAATGAGTGAACCTATAC 59.120 40.000 0.00 0.00 0.00 1.47
1630 2618 6.061022 TGGAGCAAAATGAGTGAACCTATA 57.939 37.500 0.00 0.00 0.00 1.31
1631 2619 4.922206 TGGAGCAAAATGAGTGAACCTAT 58.078 39.130 0.00 0.00 0.00 2.57
1632 2620 4.365514 TGGAGCAAAATGAGTGAACCTA 57.634 40.909 0.00 0.00 0.00 3.08
1633 2621 3.228188 TGGAGCAAAATGAGTGAACCT 57.772 42.857 0.00 0.00 0.00 3.50
1634 2622 5.126061 ACATATGGAGCAAAATGAGTGAACC 59.874 40.000 7.80 0.00 0.00 3.62
1635 2623 6.199937 ACATATGGAGCAAAATGAGTGAAC 57.800 37.500 7.80 0.00 0.00 3.18
1636 2624 7.112122 ACTACATATGGAGCAAAATGAGTGAA 58.888 34.615 15.30 0.00 0.00 3.18
1637 2625 6.653020 ACTACATATGGAGCAAAATGAGTGA 58.347 36.000 15.30 0.00 0.00 3.41
1638 2626 6.539826 TGACTACATATGGAGCAAAATGAGTG 59.460 38.462 15.30 0.00 0.00 3.51
1639 2627 6.653020 TGACTACATATGGAGCAAAATGAGT 58.347 36.000 15.30 0.00 0.00 3.41
1640 2628 7.558161 TTGACTACATATGGAGCAAAATGAG 57.442 36.000 15.30 0.00 0.00 2.90
1641 2629 9.276590 CTATTGACTACATATGGAGCAAAATGA 57.723 33.333 21.16 11.06 0.00 2.57
1642 2630 9.060347 ACTATTGACTACATATGGAGCAAAATG 57.940 33.333 21.16 16.96 0.00 2.32
1643 2631 9.060347 CACTATTGACTACATATGGAGCAAAAT 57.940 33.333 21.16 16.85 0.00 1.82
1644 2632 7.498900 CCACTATTGACTACATATGGAGCAAAA 59.501 37.037 21.16 12.28 0.00 2.44
1645 2633 6.992123 CCACTATTGACTACATATGGAGCAAA 59.008 38.462 21.16 14.26 0.00 3.68
1646 2634 6.326323 TCCACTATTGACTACATATGGAGCAA 59.674 38.462 20.18 20.18 0.00 3.91
1647 2635 5.838521 TCCACTATTGACTACATATGGAGCA 59.161 40.000 15.30 10.95 0.00 4.26
1648 2636 6.346477 TCCACTATTGACTACATATGGAGC 57.654 41.667 15.30 8.47 0.00 4.70
1649 2637 8.811017 AGATTCCACTATTGACTACATATGGAG 58.189 37.037 13.77 13.77 0.00 3.86
1650 2638 8.727100 AGATTCCACTATTGACTACATATGGA 57.273 34.615 7.80 0.00 0.00 3.41
1651 2639 8.811017 AGAGATTCCACTATTGACTACATATGG 58.189 37.037 7.80 0.00 0.00 2.74
1659 2647 9.660180 GTCTTTTAAGAGATTCCACTATTGACT 57.340 33.333 0.00 0.00 35.32 3.41
1660 2648 9.660180 AGTCTTTTAAGAGATTCCACTATTGAC 57.340 33.333 0.00 0.00 35.32 3.18
1678 2666 9.205513 ACTCCCTCCGTTAATATAAGTCTTTTA 57.794 33.333 0.00 0.00 0.00 1.52
1679 2667 8.087303 ACTCCCTCCGTTAATATAAGTCTTTT 57.913 34.615 0.00 0.00 0.00 2.27
1680 2668 7.672122 ACTCCCTCCGTTAATATAAGTCTTT 57.328 36.000 0.00 0.00 0.00 2.52
1681 2669 8.003629 ACTACTCCCTCCGTTAATATAAGTCTT 58.996 37.037 0.00 0.00 0.00 3.01
1682 2670 7.525165 ACTACTCCCTCCGTTAATATAAGTCT 58.475 38.462 0.00 0.00 0.00 3.24
1683 2671 7.757941 ACTACTCCCTCCGTTAATATAAGTC 57.242 40.000 0.00 0.00 0.00 3.01
1684 2672 8.419442 CAAACTACTCCCTCCGTTAATATAAGT 58.581 37.037 0.00 0.00 0.00 2.24
1685 2673 7.384387 GCAAACTACTCCCTCCGTTAATATAAG 59.616 40.741 0.00 0.00 0.00 1.73
1686 2674 7.147689 TGCAAACTACTCCCTCCGTTAATATAA 60.148 37.037 0.00 0.00 0.00 0.98
1687 2675 6.324512 TGCAAACTACTCCCTCCGTTAATATA 59.675 38.462 0.00 0.00 0.00 0.86
1688 2676 5.129815 TGCAAACTACTCCCTCCGTTAATAT 59.870 40.000 0.00 0.00 0.00 1.28
1689 2677 4.467082 TGCAAACTACTCCCTCCGTTAATA 59.533 41.667 0.00 0.00 0.00 0.98
1690 2678 3.262405 TGCAAACTACTCCCTCCGTTAAT 59.738 43.478 0.00 0.00 0.00 1.40
1691 2679 2.633967 TGCAAACTACTCCCTCCGTTAA 59.366 45.455 0.00 0.00 0.00 2.01
1692 2680 2.250031 TGCAAACTACTCCCTCCGTTA 58.750 47.619 0.00 0.00 0.00 3.18
1693 2681 1.053424 TGCAAACTACTCCCTCCGTT 58.947 50.000 0.00 0.00 0.00 4.44
1694 2682 1.066143 CATGCAAACTACTCCCTCCGT 60.066 52.381 0.00 0.00 0.00 4.69
1695 2683 1.656652 CATGCAAACTACTCCCTCCG 58.343 55.000 0.00 0.00 0.00 4.63
1696 2684 2.019156 GCCATGCAAACTACTCCCTCC 61.019 57.143 0.00 0.00 0.00 4.30
1697 2685 1.065126 AGCCATGCAAACTACTCCCTC 60.065 52.381 0.00 0.00 0.00 4.30
1698 2686 0.995024 AGCCATGCAAACTACTCCCT 59.005 50.000 0.00 0.00 0.00 4.20
1699 2687 1.745653 GAAGCCATGCAAACTACTCCC 59.254 52.381 0.00 0.00 0.00 4.30
1700 2688 2.421424 CAGAAGCCATGCAAACTACTCC 59.579 50.000 0.00 0.00 0.00 3.85
1701 2689 2.421424 CCAGAAGCCATGCAAACTACTC 59.579 50.000 0.00 0.00 0.00 2.59
1702 2690 2.224867 ACCAGAAGCCATGCAAACTACT 60.225 45.455 0.00 0.00 0.00 2.57
1703 2691 2.162408 GACCAGAAGCCATGCAAACTAC 59.838 50.000 0.00 0.00 0.00 2.73
1714 2702 0.107459 GGATCAGGTGACCAGAAGCC 60.107 60.000 3.63 3.92 0.00 4.35
1742 2730 7.381408 GGGAAGTTTTGAACCTAAATTTCTTCG 59.619 37.037 0.00 0.00 33.96 3.79
1749 2737 6.609616 TGAAGTGGGAAGTTTTGAACCTAAAT 59.390 34.615 0.00 0.00 0.00 1.40
1763 2751 6.464222 TCTACATTTACTGTGAAGTGGGAAG 58.536 40.000 0.00 0.00 38.92 3.46
1801 2791 9.632638 AGCAAATCCAGTAACTAATCACATTAT 57.367 29.630 0.00 0.00 0.00 1.28
1803 2793 7.944729 AGCAAATCCAGTAACTAATCACATT 57.055 32.000 0.00 0.00 0.00 2.71
1958 2948 3.938963 GCACTCGGGAATATCTTGAACAA 59.061 43.478 0.00 0.00 0.00 2.83
1977 2967 5.819901 AGAATTTGATAGCTAACCTCTGCAC 59.180 40.000 0.00 0.00 0.00 4.57
2011 3001 1.143305 CGGACACTCTGCAACTCTTG 58.857 55.000 0.00 0.00 0.00 3.02
2019 3009 1.068250 GGATAGCCGGACACTCTGC 59.932 63.158 5.05 0.00 0.00 4.26
2022 3012 0.824759 AAGTGGATAGCCGGACACTC 59.175 55.000 5.05 0.00 42.85 3.51
2026 3016 1.207329 AGTTCAAGTGGATAGCCGGAC 59.793 52.381 5.05 0.00 36.79 4.79
2110 3100 2.757099 GCTTGGGTGATGGGCTGG 60.757 66.667 0.00 0.00 0.00 4.85
2203 3194 7.280573 CACTTCGTGATGTGAAGACAGTATGT 61.281 42.308 9.50 0.00 44.84 2.29
2208 3199 3.642705 TCACTTCGTGATGTGAAGACAG 58.357 45.455 14.11 0.45 44.42 3.51
2217 3208 7.182361 ACATATTATGCTTCACTTCGTGATG 57.818 36.000 3.52 1.94 42.40 3.07
2230 3221 8.256356 AGACCAGAGTTCTAACATATTATGCT 57.744 34.615 3.52 0.00 0.00 3.79
2275 3266 0.961019 TCATCAAAAGGCTGCACACC 59.039 50.000 0.50 0.00 0.00 4.16
2386 3377 4.854291 TGGCGCAAAATAAAACTGAATACG 59.146 37.500 10.83 0.00 0.00 3.06
2399 3390 3.574614 GTGTATGTTCTTGGCGCAAAAT 58.425 40.909 10.83 0.00 0.00 1.82
2487 3478 2.065899 TTCTGTGTTGGGAACTTGGG 57.934 50.000 0.00 0.00 0.00 4.12
2488 3479 3.004734 GTCATTCTGTGTTGGGAACTTGG 59.995 47.826 0.00 0.00 0.00 3.61
2489 3480 3.004734 GGTCATTCTGTGTTGGGAACTTG 59.995 47.826 0.00 0.00 0.00 3.16
2490 3481 3.117512 AGGTCATTCTGTGTTGGGAACTT 60.118 43.478 0.00 0.00 0.00 2.66
2491 3482 2.443255 AGGTCATTCTGTGTTGGGAACT 59.557 45.455 0.00 0.00 0.00 3.01
2492 3483 2.814336 GAGGTCATTCTGTGTTGGGAAC 59.186 50.000 0.00 0.00 0.00 3.62
2493 3484 2.441375 TGAGGTCATTCTGTGTTGGGAA 59.559 45.455 0.00 0.00 0.00 3.97
2494 3485 2.054021 TGAGGTCATTCTGTGTTGGGA 58.946 47.619 0.00 0.00 0.00 4.37
2641 3633 4.932200 ACAGTACAGCTTAGAACAGATTGC 59.068 41.667 0.00 0.00 0.00 3.56
2670 3662 9.393512 CATATTTCAATTATTTTGGGCTTGGAA 57.606 29.630 0.00 0.00 0.00 3.53
2824 3816 5.788450 CAGAATACTCAGTTGAACCTCAGT 58.212 41.667 0.00 0.00 0.00 3.41
2828 3820 3.327757 TGGCAGAATACTCAGTTGAACCT 59.672 43.478 0.00 0.00 0.00 3.50
2829 3821 3.674997 TGGCAGAATACTCAGTTGAACC 58.325 45.455 0.00 0.00 0.00 3.62
2830 3822 4.757149 ACTTGGCAGAATACTCAGTTGAAC 59.243 41.667 0.00 0.00 0.00 3.18
2831 3823 4.973168 ACTTGGCAGAATACTCAGTTGAA 58.027 39.130 0.00 0.00 0.00 2.69
2835 3827 4.833478 ATGACTTGGCAGAATACTCAGT 57.167 40.909 0.00 0.00 0.00 3.41
2963 3969 3.298619 TGTCTGGAAATTGGCCCATATG 58.701 45.455 0.00 0.00 0.00 1.78
3025 4031 6.729100 ACGGATGAATGGAGGGAGTATATTAA 59.271 38.462 0.00 0.00 0.00 1.40
3381 4398 9.657419 GAAGTTCTAAGACTAGACTGTAGTACT 57.343 37.037 0.00 0.00 33.73 2.73
3407 4424 4.696877 TCACCAGTATTCATCACTTTGCAG 59.303 41.667 0.00 0.00 0.00 4.41
3436 4453 3.209410 GCACTCCATATTCCACCTTCAG 58.791 50.000 0.00 0.00 0.00 3.02
3642 4668 1.868713 TCTTATAACGGGGGCACTCA 58.131 50.000 0.00 0.00 0.00 3.41
3720 4746 4.100808 TGGTCCTTGCAGCTTGTAAAAATT 59.899 37.500 0.00 0.00 0.00 1.82
3791 4817 9.670719 GAGTAAGAACAAAAAGGAAATCTGAAG 57.329 33.333 0.00 0.00 0.00 3.02
3916 4942 3.290710 AGGAAAATGCCGCATAGATGTT 58.709 40.909 6.22 0.00 0.00 2.71
4143 5169 9.632807 CTGGCTATCTTCATTATAACAGTAGTC 57.367 37.037 0.00 0.00 0.00 2.59
4278 5304 1.550976 AGTGAACAGTAGCCTGCCTAC 59.449 52.381 0.00 0.00 45.55 3.18
4419 5448 1.272212 GGAGTCCAGCTATGCTAGAGC 59.728 57.143 3.60 0.00 36.40 4.09
4534 5579 5.299531 GTCTTGAAGGGAATTAGGGTATTGC 59.700 44.000 0.00 0.00 0.00 3.56
4690 5736 2.031314 CGAACCATGTGCAGCTAGAATG 59.969 50.000 0.00 0.00 0.00 2.67
5222 6276 5.587844 ACTGATTCGAGCAAAAGCTATCAAT 59.412 36.000 0.00 0.00 0.00 2.57
5416 6470 1.541310 TTCAGGCCAGACCCTACACG 61.541 60.000 5.01 0.00 40.58 4.49
5456 6510 1.746991 GCTCTTTTCCCGAGCCAGG 60.747 63.158 0.74 0.00 46.22 4.45
5506 6560 2.952310 ACTTGGTTTCTCAGACTTTGCC 59.048 45.455 0.00 0.00 0.00 4.52
5583 6722 0.251608 GGCTTTAGAACCAGGCCCAA 60.252 55.000 0.00 0.00 37.12 4.12
5676 6816 8.818622 AGTGAGACACTATAAATGGTACACTA 57.181 34.615 2.43 0.00 42.52 2.74
5794 6934 6.095300 TGCTGACTTCTCAAAAGACAATTTCA 59.905 34.615 0.00 0.00 0.00 2.69
6237 7389 5.350504 TCCATGGTCTCTTCTCATCTTTC 57.649 43.478 12.58 0.00 0.00 2.62
6357 7509 5.126384 TGTCACCTTTTTAAAACTGTCCCAG 59.874 40.000 0.00 0.00 37.52 4.45
6394 7546 3.263425 GGGTACAAGATTTGGACTCCTCA 59.737 47.826 4.33 0.00 44.16 3.86
6693 8250 0.482446 AATCACCCAAGCCAGGTTGA 59.518 50.000 11.01 0.00 34.56 3.18
6769 8328 3.277715 TGCGCCACTGAAATATTCATGA 58.722 40.909 4.18 0.00 39.30 3.07
6770 8329 3.696281 TGCGCCACTGAAATATTCATG 57.304 42.857 4.18 0.00 39.30 3.07
6885 8444 5.358298 AAGTCGAAGTTATTTGAACAGGC 57.642 39.130 0.00 0.00 30.40 4.85
6978 8538 7.651027 AATAGAAAAGGCAAACTAGCATCAT 57.349 32.000 0.00 0.00 35.83 2.45
7013 8573 0.904649 TGGACCATGAGCAATCGTCT 59.095 50.000 0.00 0.00 0.00 4.18
7016 8576 0.949397 CCATGGACCATGAGCAATCG 59.051 55.000 32.16 12.36 43.81 3.34
7168 8728 1.477105 GCTTTCGCTTTCGCTTTTGT 58.523 45.000 0.00 0.00 35.26 2.83
7174 8734 0.426025 GTTTTCGCTTTCGCTTTCGC 59.574 50.000 0.00 0.00 35.26 4.70
7175 8735 1.737249 TGTTTTCGCTTTCGCTTTCG 58.263 45.000 0.00 0.00 35.26 3.46
7176 8736 4.493074 TTTTGTTTTCGCTTTCGCTTTC 57.507 36.364 0.00 0.00 35.26 2.62
7177 8737 3.241963 GCTTTTGTTTTCGCTTTCGCTTT 60.242 39.130 0.00 0.00 35.26 3.51
7178 8738 2.281498 GCTTTTGTTTTCGCTTTCGCTT 59.719 40.909 0.00 0.00 35.26 4.68
7179 8739 1.852280 GCTTTTGTTTTCGCTTTCGCT 59.148 42.857 0.00 0.00 35.26 4.93
7180 8740 1.394223 CGCTTTTGTTTTCGCTTTCGC 60.394 47.619 0.00 0.00 35.26 4.70
7181 8741 2.105659 TCGCTTTTGTTTTCGCTTTCG 58.894 42.857 0.00 0.00 0.00 3.46
7182 8742 4.493074 TTTCGCTTTTGTTTTCGCTTTC 57.507 36.364 0.00 0.00 0.00 2.62
7183 8743 4.912528 TTTTCGCTTTTGTTTTCGCTTT 57.087 31.818 0.00 0.00 0.00 3.51
7184 8744 4.623595 TCTTTTTCGCTTTTGTTTTCGCTT 59.376 33.333 0.00 0.00 0.00 4.68
7185 8745 4.170256 TCTTTTTCGCTTTTGTTTTCGCT 58.830 34.783 0.00 0.00 0.00 4.93
7186 8746 4.493074 TCTTTTTCGCTTTTGTTTTCGC 57.507 36.364 0.00 0.00 0.00 4.70
7232 8792 1.880027 GACCAAATCGTTTGTCTGGCT 59.120 47.619 8.83 0.00 38.98 4.75
7233 8793 1.606668 TGACCAAATCGTTTGTCTGGC 59.393 47.619 8.83 0.00 38.98 4.85
7239 8801 6.092748 CCTTTTCCTATGACCAAATCGTTTG 58.907 40.000 4.20 4.20 40.32 2.93
7256 8818 1.039856 TGCCACTTTCAGCCTTTTCC 58.960 50.000 0.00 0.00 0.00 3.13
7267 8830 2.906897 CACAGCCCGTGCCACTTT 60.907 61.111 0.00 0.00 39.19 2.66
7293 8856 0.887247 AACATGCAAGCATACGCCAA 59.113 45.000 7.29 0.00 39.83 4.52
7328 8891 1.354040 CTCACGGCAACTCATCACTC 58.646 55.000 0.00 0.00 0.00 3.51
7336 8899 1.880027 GTGAAATTCCTCACGGCAACT 59.120 47.619 0.00 0.00 36.64 3.16
7344 8907 0.608035 GGCCGGTGTGAAATTCCTCA 60.608 55.000 1.90 0.00 0.00 3.86
7362 8925 3.558505 CTTGAGTTGATGCTTCGTTTGG 58.441 45.455 0.00 0.00 0.00 3.28
7371 8934 5.831702 AATTGAGATCCTTGAGTTGATGC 57.168 39.130 0.00 0.00 0.00 3.91
7398 8961 9.653287 CTATGTGAGTTTCTACAAATACCTTGA 57.347 33.333 0.00 0.00 38.50 3.02
7425 8988 7.482169 TGTAAGTTCCTGATTGAGACACTAT 57.518 36.000 0.00 0.00 0.00 2.12
7462 9025 7.939588 ACAAGAAGGGAATAAGCCAGTATATTC 59.060 37.037 0.00 0.00 37.65 1.75
7495 9058 2.267174 ACTGCACAGTCTCAATGCTT 57.733 45.000 0.00 0.00 36.92 3.91
7558 9121 3.713858 TTTGGTGAAACAGCACATGAG 57.286 42.857 0.00 0.00 41.66 2.90
7562 9125 3.937706 CCAAAATTTGGTGAAACAGCACA 59.062 39.130 16.24 0.00 45.93 4.57
7563 9126 4.534794 CCAAAATTTGGTGAAACAGCAC 57.465 40.909 16.24 0.00 45.93 4.40
7595 9158 1.475403 TTTCCAACAAAGGCGAACCA 58.525 45.000 0.00 0.00 39.06 3.67
7596 9159 2.812358 ATTTCCAACAAAGGCGAACC 57.188 45.000 0.00 0.00 0.00 3.62
7604 9167 7.553334 AGTCTACGCTCTATATTTCCAACAAA 58.447 34.615 0.00 0.00 0.00 2.83
7641 9364 0.908198 ACTTTGCTGCCTCTCCCTAG 59.092 55.000 0.00 0.00 0.00 3.02
7645 9368 3.272031 GCACTTTGCTGCCTCTCC 58.728 61.111 0.00 0.00 40.96 3.71
7661 9384 3.903467 ACATAAAATGAGGAGAAGGGGC 58.097 45.455 0.00 0.00 0.00 5.80
7662 9385 8.539117 AAATAACATAAAATGAGGAGAAGGGG 57.461 34.615 0.00 0.00 0.00 4.79
7679 9578 6.974622 GCAGAAAATGATGGTCGAAATAACAT 59.025 34.615 0.00 0.00 0.00 2.71
7680 9579 6.321717 GCAGAAAATGATGGTCGAAATAACA 58.678 36.000 0.00 0.00 0.00 2.41
7681 9580 5.743872 GGCAGAAAATGATGGTCGAAATAAC 59.256 40.000 0.00 0.00 0.00 1.89
7682 9581 5.163561 GGGCAGAAAATGATGGTCGAAATAA 60.164 40.000 0.00 0.00 0.00 1.40
7684 9583 3.131046 GGGCAGAAAATGATGGTCGAAAT 59.869 43.478 0.00 0.00 0.00 2.17
7689 9626 3.181472 GGAATGGGCAGAAAATGATGGTC 60.181 47.826 0.00 0.00 0.00 4.02
7703 9640 0.251787 AGTTTGGTGGAGGAATGGGC 60.252 55.000 0.00 0.00 0.00 5.36
7707 9644 2.649312 TCCATGAGTTTGGTGGAGGAAT 59.351 45.455 0.00 0.00 37.12 3.01
7750 9690 7.282450 GGGAGTACACCCTAAAGATACAAAATG 59.718 40.741 20.23 0.00 45.90 2.32
7767 9707 2.134789 TAGGAACGGAGGGAGTACAC 57.865 55.000 0.00 0.00 0.00 2.90
7772 9712 7.908453 AGATTTATATTTAGGAACGGAGGGAG 58.092 38.462 0.00 0.00 0.00 4.30
7773 9713 7.867160 AGATTTATATTTAGGAACGGAGGGA 57.133 36.000 0.00 0.00 0.00 4.20
7774 9714 8.919777 AAAGATTTATATTTAGGAACGGAGGG 57.080 34.615 0.00 0.00 0.00 4.30
7805 9745 8.930760 GCTCTGTATGTAGTCCATATTGAAATC 58.069 37.037 0.00 0.00 38.29 2.17
7806 9746 8.432013 TGCTCTGTATGTAGTCCATATTGAAAT 58.568 33.333 0.00 0.00 38.29 2.17
7807 9747 7.791029 TGCTCTGTATGTAGTCCATATTGAAA 58.209 34.615 0.00 0.00 38.29 2.69
7808 9748 7.360113 TGCTCTGTATGTAGTCCATATTGAA 57.640 36.000 0.00 0.00 38.29 2.69
7809 9749 6.976934 TGCTCTGTATGTAGTCCATATTGA 57.023 37.500 0.00 0.00 38.29 2.57
7810 9750 8.437360 TTTTGCTCTGTATGTAGTCCATATTG 57.563 34.615 0.00 0.00 38.29 1.90
7811 9751 9.060347 CATTTTGCTCTGTATGTAGTCCATATT 57.940 33.333 0.00 0.00 38.29 1.28
7812 9752 7.173907 GCATTTTGCTCTGTATGTAGTCCATAT 59.826 37.037 0.00 0.00 40.96 1.78
7813 9753 6.483307 GCATTTTGCTCTGTATGTAGTCCATA 59.517 38.462 0.00 0.00 40.96 2.74
7814 9754 5.297776 GCATTTTGCTCTGTATGTAGTCCAT 59.702 40.000 0.00 0.00 40.96 3.41
7815 9755 4.635765 GCATTTTGCTCTGTATGTAGTCCA 59.364 41.667 0.00 0.00 40.96 4.02
7816 9756 4.260375 CGCATTTTGCTCTGTATGTAGTCC 60.260 45.833 0.00 0.00 42.25 3.85
7817 9757 4.330074 ACGCATTTTGCTCTGTATGTAGTC 59.670 41.667 0.00 0.00 42.25 2.59
7818 9758 4.093408 CACGCATTTTGCTCTGTATGTAGT 59.907 41.667 0.00 0.00 42.25 2.73
7819 9759 4.329801 TCACGCATTTTGCTCTGTATGTAG 59.670 41.667 0.00 0.00 42.25 2.74
7820 9760 4.249661 TCACGCATTTTGCTCTGTATGTA 58.750 39.130 0.00 0.00 42.25 2.29
7821 9761 3.073678 TCACGCATTTTGCTCTGTATGT 58.926 40.909 0.00 0.00 42.25 2.29
7822 9762 3.745332 TCACGCATTTTGCTCTGTATG 57.255 42.857 0.00 0.00 42.25 2.39
7823 9763 4.637534 AGATTCACGCATTTTGCTCTGTAT 59.362 37.500 0.00 0.00 42.25 2.29
7824 9764 4.002982 AGATTCACGCATTTTGCTCTGTA 58.997 39.130 0.00 0.00 42.25 2.74
7825 9765 2.816087 AGATTCACGCATTTTGCTCTGT 59.184 40.909 0.00 0.00 42.25 3.41
7826 9766 3.482722 AGATTCACGCATTTTGCTCTG 57.517 42.857 0.00 0.00 42.25 3.35
7827 9767 4.002982 TGTAGATTCACGCATTTTGCTCT 58.997 39.130 0.00 0.00 42.25 4.09
7828 9768 4.091424 GTGTAGATTCACGCATTTTGCTC 58.909 43.478 0.00 0.00 42.25 4.26
7829 9769 3.753272 AGTGTAGATTCACGCATTTTGCT 59.247 39.130 0.00 0.00 42.25 3.91
7830 9770 4.083581 AGTGTAGATTCACGCATTTTGC 57.916 40.909 0.00 0.00 42.40 3.68
7831 9771 5.536554 AGAGTGTAGATTCACGCATTTTG 57.463 39.130 0.00 0.00 42.40 2.44
7832 9772 7.667043 TTTAGAGTGTAGATTCACGCATTTT 57.333 32.000 0.00 0.00 42.40 1.82
7833 9773 7.849804 ATTTAGAGTGTAGATTCACGCATTT 57.150 32.000 0.00 0.00 42.40 2.32
7834 9774 7.334421 ACAATTTAGAGTGTAGATTCACGCATT 59.666 33.333 0.00 0.00 42.40 3.56
7835 9775 6.818644 ACAATTTAGAGTGTAGATTCACGCAT 59.181 34.615 0.00 0.00 42.40 4.73
7836 9776 6.090763 CACAATTTAGAGTGTAGATTCACGCA 59.909 38.462 0.00 0.00 42.40 5.24
7837 9777 6.090898 ACACAATTTAGAGTGTAGATTCACGC 59.909 38.462 0.00 0.00 46.32 5.34
7838 9778 7.582435 ACACAATTTAGAGTGTAGATTCACG 57.418 36.000 0.00 0.00 46.32 4.35
7857 9797 9.511272 ACTACATACGGATGTATATAGACACAA 57.489 33.333 20.64 0.00 45.42 3.33
7858 9798 9.511272 AACTACATACGGATGTATATAGACACA 57.489 33.333 20.64 0.00 45.42 3.72
7902 9842 4.784177 TCCGTTCCCAAAAGTAAGTCTTT 58.216 39.130 0.00 0.00 46.86 2.52
7903 9843 4.386711 CTCCGTTCCCAAAAGTAAGTCTT 58.613 43.478 0.00 0.00 38.10 3.01
7904 9844 3.244457 CCTCCGTTCCCAAAAGTAAGTCT 60.244 47.826 0.00 0.00 0.00 3.24
7905 9845 3.072211 CCTCCGTTCCCAAAAGTAAGTC 58.928 50.000 0.00 0.00 0.00 3.01
7906 9846 2.224695 CCCTCCGTTCCCAAAAGTAAGT 60.225 50.000 0.00 0.00 0.00 2.24
7907 9847 2.039348 TCCCTCCGTTCCCAAAAGTAAG 59.961 50.000 0.00 0.00 0.00 2.34
7908 9848 2.039348 CTCCCTCCGTTCCCAAAAGTAA 59.961 50.000 0.00 0.00 0.00 2.24
7909 9849 1.626825 CTCCCTCCGTTCCCAAAAGTA 59.373 52.381 0.00 0.00 0.00 2.24
7910 9850 0.400594 CTCCCTCCGTTCCCAAAAGT 59.599 55.000 0.00 0.00 0.00 2.66
7911 9851 0.400594 ACTCCCTCCGTTCCCAAAAG 59.599 55.000 0.00 0.00 0.00 2.27
7912 9852 1.732117 TACTCCCTCCGTTCCCAAAA 58.268 50.000 0.00 0.00 0.00 2.44
7913 9853 1.961133 ATACTCCCTCCGTTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
7914 9854 2.852714 TATACTCCCTCCGTTCCCAA 57.147 50.000 0.00 0.00 0.00 4.12
7915 9855 2.449730 AGATATACTCCCTCCGTTCCCA 59.550 50.000 0.00 0.00 0.00 4.37
7916 9856 3.172471 AGATATACTCCCTCCGTTCCC 57.828 52.381 0.00 0.00 0.00 3.97
7917 9857 5.163332 ACAAAAGATATACTCCCTCCGTTCC 60.163 44.000 0.00 0.00 0.00 3.62
7918 9858 5.915175 ACAAAAGATATACTCCCTCCGTTC 58.085 41.667 0.00 0.00 0.00 3.95
7919 9859 5.952347 ACAAAAGATATACTCCCTCCGTT 57.048 39.130 0.00 0.00 0.00 4.44
7920 9860 5.952347 AACAAAAGATATACTCCCTCCGT 57.048 39.130 0.00 0.00 0.00 4.69
7921 9861 7.120726 ACAAAAACAAAAGATATACTCCCTCCG 59.879 37.037 0.00 0.00 0.00 4.63
7922 9862 8.349568 ACAAAAACAAAAGATATACTCCCTCC 57.650 34.615 0.00 0.00 0.00 4.30
7924 9864 9.981114 CAAACAAAAACAAAAGATATACTCCCT 57.019 29.630 0.00 0.00 0.00 4.20
7925 9865 8.708742 GCAAACAAAAACAAAAGATATACTCCC 58.291 33.333 0.00 0.00 0.00 4.30
7926 9866 9.476202 AGCAAACAAAAACAAAAGATATACTCC 57.524 29.630 0.00 0.00 0.00 3.85
7932 9872 9.376075 TGATTGAGCAAACAAAAACAAAAGATA 57.624 25.926 0.00 0.00 33.44 1.98
7933 9873 8.266392 TGATTGAGCAAACAAAAACAAAAGAT 57.734 26.923 0.00 0.00 33.44 2.40
7934 9874 7.664082 TGATTGAGCAAACAAAAACAAAAGA 57.336 28.000 0.00 0.00 33.44 2.52
7935 9875 7.942145 CTGATTGAGCAAACAAAAACAAAAG 57.058 32.000 0.00 0.00 33.44 2.27
7955 9895 2.965831 ACGGTGGTAGATACATGCTGAT 59.034 45.455 0.00 0.00 0.00 2.90
7961 9901 6.015688 CCACATACTAACGGTGGTAGATACAT 60.016 42.308 2.31 0.00 45.48 2.29
7980 9920 1.479709 CAATTTTCCCCGGCCACATA 58.520 50.000 2.24 0.00 0.00 2.29
7993 9933 0.755686 TCTTTGTGCGCCCCAATTTT 59.244 45.000 4.18 0.00 0.00 1.82
8004 9944 3.118542 CTGAAAAACCTGCTCTTTGTGC 58.881 45.455 0.00 0.00 0.00 4.57
8023 9963 0.106868 TTGGAGGAGGCATGCATCTG 60.107 55.000 29.25 0.00 0.00 2.90
8034 9974 3.875727 CACTAGATGTTGCATTGGAGGAG 59.124 47.826 0.00 0.00 0.00 3.69
8056 9996 5.589050 GGTGGGTGTGAATATCTTTCCTTAC 59.411 44.000 0.00 0.00 0.00 2.34
8098 10061 4.036380 GGGTTGGATAAAGCGTGGAATAAG 59.964 45.833 0.00 0.00 37.13 1.73
8124 10087 9.112725 GGAAACGGGTGTAGTATGTATATTTTT 57.887 33.333 0.00 0.00 0.00 1.94
8128 10091 6.982160 TGGAAACGGGTGTAGTATGTATAT 57.018 37.500 0.00 0.00 0.00 0.86
8129 10092 6.788598 TTGGAAACGGGTGTAGTATGTATA 57.211 37.500 0.00 0.00 0.00 1.47
8134 10097 6.714278 ACTAATTTGGAAACGGGTGTAGTAT 58.286 36.000 0.00 0.00 0.00 2.12
8135 10098 6.112927 ACTAATTTGGAAACGGGTGTAGTA 57.887 37.500 0.00 0.00 0.00 1.82
8136 10099 4.976864 ACTAATTTGGAAACGGGTGTAGT 58.023 39.130 0.00 0.00 0.00 2.73
8142 10105 7.722795 AAATTTGAACTAATTTGGAAACGGG 57.277 32.000 6.27 0.00 36.60 5.28
8149 10112 8.503196 GCAACCCTAAAATTTGAACTAATTTGG 58.497 33.333 7.45 7.36 37.67 3.28
8172 10135 1.203075 ACGGGGTTGAATTTAGGGCAA 60.203 47.619 0.00 0.00 0.00 4.52
8175 10138 4.381185 GCTTTTACGGGGTTGAATTTAGGG 60.381 45.833 0.00 0.00 0.00 3.53
8177 10140 5.638596 AGCTTTTACGGGGTTGAATTTAG 57.361 39.130 0.00 0.00 0.00 1.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.