Multiple sequence alignment - TraesCS3D01G421700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G421700 chr3D 100.000 6178 0 0 1 6178 533887485 533881308 0.000000e+00 11409
1 TraesCS3D01G421700 chr3D 100.000 133 0 0 6403 6535 533881083 533880951 5.060000e-61 246
2 TraesCS3D01G421700 chr3D 92.473 93 7 0 3183 3275 271512668 271512576 4.110000e-27 134
3 TraesCS3D01G421700 chr3D 94.253 87 5 0 3184 3270 570848752 570848666 4.110000e-27 134
4 TraesCS3D01G421700 chr3D 89.000 100 10 1 3184 3282 503735844 503735745 8.900000e-24 122
5 TraesCS3D01G421700 chr3B 88.729 1739 89 42 1469 3185 705821009 705819356 0.000000e+00 2026
6 TraesCS3D01G421700 chr3B 89.783 1478 81 30 4533 5944 705818153 705816680 0.000000e+00 1829
7 TraesCS3D01G421700 chr3B 91.835 1139 56 19 3267 4398 705819342 705818234 0.000000e+00 1554
8 TraesCS3D01G421700 chr3B 88.620 703 30 12 758 1436 705821681 705821005 0.000000e+00 809
9 TraesCS3D01G421700 chr3B 83.688 282 21 14 495 774 705821964 705821706 6.550000e-60 243
10 TraesCS3D01G421700 chr3B 84.351 262 20 12 5931 6178 705816651 705816397 3.050000e-58 237
11 TraesCS3D01G421700 chr3B 90.441 136 10 1 6403 6535 705816368 705816233 6.730000e-40 176
12 TraesCS3D01G421700 chr3B 85.294 102 12 2 2198 2299 705820355 705820257 1.160000e-17 102
13 TraesCS3D01G421700 chr3A 93.365 1251 61 7 3267 4509 669731522 669730286 0.000000e+00 1831
14 TraesCS3D01G421700 chr3A 91.675 1021 43 16 4630 5623 669730022 669729017 0.000000e+00 1376
15 TraesCS3D01G421700 chr3A 90.095 1050 69 16 2148 3185 669732562 669731536 0.000000e+00 1330
16 TraesCS3D01G421700 chr3A 89.655 957 49 21 1341 2268 669733345 669732410 0.000000e+00 1173
17 TraesCS3D01G421700 chr3A 90.041 492 15 9 758 1241 669733885 669733420 2.020000e-169 606
18 TraesCS3D01G421700 chr3A 81.759 762 106 24 19 774 669734648 669733914 2.020000e-169 606
19 TraesCS3D01G421700 chr3A 90.625 96 5 3 3184 3279 550416259 550416168 2.470000e-24 124
20 TraesCS3D01G421700 chr1D 94.505 91 5 0 3184 3274 363804256 363804166 2.460000e-29 141
21 TraesCS3D01G421700 chr6B 94.186 86 5 0 3184 3269 665711351 665711436 1.480000e-26 132
22 TraesCS3D01G421700 chr6A 94.186 86 5 0 3184 3269 610518793 610518878 1.480000e-26 132
23 TraesCS3D01G421700 chr5D 92.308 91 7 0 3184 3274 250069628 250069718 5.320000e-26 130
24 TraesCS3D01G421700 chr5B 87.500 104 13 0 3170 3273 278011864 278011967 3.200000e-23 121
25 TraesCS3D01G421700 chr5A 92.857 84 3 2 2998 3081 537992541 537992621 1.150000e-22 119


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G421700 chr3D 533880951 533887485 6534 True 5827.500000 11409 100.000000 1 6535 2 chr3D.!!$R4 6534
1 TraesCS3D01G421700 chr3B 705816233 705821964 5731 True 872.000000 2026 87.842625 495 6535 8 chr3B.!!$R1 6040
2 TraesCS3D01G421700 chr3A 669729017 669734648 5631 True 1153.666667 1831 89.431667 19 5623 6 chr3A.!!$R2 5604

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
330 332 0.038166 GGGAATGGGCTGAAGTGACA 59.962 55.0 0.00 0.0 0.00 3.58 F
475 480 0.243907 CGTAGATGCCATCCTACCCG 59.756 60.0 0.00 0.0 33.52 5.28 F
2097 2218 0.389426 GCTCGCTTGACGGTTTCCTA 60.389 55.0 0.00 0.0 43.89 2.94 F
2520 2642 0.102300 GCAAAGAACCTGGTTTGCGT 59.898 50.0 14.28 0.0 46.49 5.24 F
3242 3372 0.178068 ACACTGGTGTCAGAAACGCT 59.822 50.0 0.01 0.0 43.49 5.07 F
3244 3374 0.753262 ACTGGTGTCAGAAACGCTCT 59.247 50.0 0.00 0.0 43.49 4.09 F
4746 5079 0.674895 AGCGTGCAACCTTCATCTCC 60.675 55.0 0.00 0.0 0.00 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1324 1404 0.108138 CGCCCAGAGACGATCCTTTT 60.108 55.000 0.00 0.0 0.00 2.27 R
2218 2340 0.120377 AACCCACCCTCCATCAGGTA 59.880 55.000 0.00 0.0 41.51 3.08 R
3252 3382 0.722676 AAGGTACTCCCTCCATCCCA 59.277 55.000 0.00 0.0 45.47 4.37 R
3341 3472 1.602377 GTTGCAACTCTTAACGCCTGT 59.398 47.619 22.36 0.0 0.00 4.00 R
4576 4723 0.178990 AGTTCAAGGTGGTCCAAGGC 60.179 55.000 0.00 0.0 35.89 4.35 R
5073 5406 1.072505 GGAAAGGCCGGTCAGTTCA 59.927 57.895 20.21 0.0 0.00 3.18 R
6052 6491 0.249868 GCAGGCTTTTGGTTTGTCCC 60.250 55.000 0.00 0.0 34.77 4.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 6.971527 TTTTAATGTTTTCTCGCTCGGATA 57.028 33.333 0.00 0.00 0.00 2.59
39 40 5.175859 TGTTTTCTCGCTCGGATATCTTTT 58.824 37.500 2.05 0.00 0.00 2.27
43 44 3.004839 TCTCGCTCGGATATCTTTTCAGG 59.995 47.826 2.05 0.00 0.00 3.86
46 47 2.805099 GCTCGGATATCTTTTCAGGCAG 59.195 50.000 2.05 0.00 0.00 4.85
47 48 3.493350 GCTCGGATATCTTTTCAGGCAGA 60.493 47.826 2.05 0.00 0.00 4.26
48 49 4.305769 CTCGGATATCTTTTCAGGCAGAG 58.694 47.826 2.05 0.00 0.00 3.35
51 52 4.681781 CGGATATCTTTTCAGGCAGAGTGT 60.682 45.833 2.05 0.00 0.00 3.55
54 55 6.151817 GGATATCTTTTCAGGCAGAGTGTTTT 59.848 38.462 2.05 0.00 0.00 2.43
56 57 6.959639 ATCTTTTCAGGCAGAGTGTTTTTA 57.040 33.333 0.00 0.00 0.00 1.52
57 58 6.131544 TCTTTTCAGGCAGAGTGTTTTTAC 57.868 37.500 0.00 0.00 0.00 2.01
65 66 3.983344 GCAGAGTGTTTTTACTGCCATTG 59.017 43.478 0.00 0.00 46.46 2.82
80 81 2.481185 GCCATTGTGGTTTGATTTGCAG 59.519 45.455 0.00 0.00 40.46 4.41
82 83 3.742369 CCATTGTGGTTTGATTTGCAGAC 59.258 43.478 0.00 0.00 31.35 3.51
83 84 4.370049 CATTGTGGTTTGATTTGCAGACA 58.630 39.130 0.00 0.00 33.48 3.41
89 90 4.161189 TGGTTTGATTTGCAGACAGGAAAA 59.839 37.500 0.00 0.00 41.06 2.29
90 91 5.163322 TGGTTTGATTTGCAGACAGGAAAAT 60.163 36.000 0.00 0.00 41.06 1.82
92 93 4.524316 TGATTTGCAGACAGGAAAATGG 57.476 40.909 0.00 0.00 41.06 3.16
94 95 4.219070 TGATTTGCAGACAGGAAAATGGAG 59.781 41.667 0.00 0.00 41.06 3.86
95 96 1.538047 TGCAGACAGGAAAATGGAGC 58.462 50.000 0.00 0.00 0.00 4.70
96 97 1.202915 TGCAGACAGGAAAATGGAGCA 60.203 47.619 0.00 0.00 0.00 4.26
97 98 1.888512 GCAGACAGGAAAATGGAGCAA 59.111 47.619 0.00 0.00 0.00 3.91
98 99 2.494870 GCAGACAGGAAAATGGAGCAAT 59.505 45.455 0.00 0.00 0.00 3.56
99 100 3.675228 GCAGACAGGAAAATGGAGCAATG 60.675 47.826 0.00 0.00 0.00 2.82
112 113 1.154150 GCAATGCAGTTCTCCGCAC 60.154 57.895 0.00 0.00 41.79 5.34
126 127 0.389817 CCGCACGAGGATTGACTTGA 60.390 55.000 0.00 0.00 0.00 3.02
150 151 2.434185 GCGCCAGACACGGATGAA 60.434 61.111 0.00 0.00 0.00 2.57
159 160 3.056821 CAGACACGGATGAAGAGGTGTTA 60.057 47.826 0.00 0.00 43.14 2.41
171 172 3.521727 AGAGGTGTTAGAGGATGGTTGT 58.478 45.455 0.00 0.00 0.00 3.32
178 179 3.918253 GAGGATGGTTGTGGCGGCA 62.918 63.158 7.97 7.97 0.00 5.69
185 186 4.269523 TTGTGGCGGCAGAGGCTT 62.270 61.111 13.91 0.00 40.87 4.35
196 197 3.760035 GAGGCTTGGCGGTCGAGA 61.760 66.667 0.00 0.00 0.00 4.04
213 214 3.057104 TCGAGACGACTAAGGCAAAATGA 60.057 43.478 0.00 0.00 0.00 2.57
217 218 3.994392 GACGACTAAGGCAAAATGAGACA 59.006 43.478 0.00 0.00 0.00 3.41
237 238 4.228567 TGGTCAGCCAACGCGACA 62.229 61.111 15.93 0.00 42.83 4.35
263 264 4.034258 GTCGCGAGTGACGGTGGA 62.034 66.667 10.24 0.00 42.83 4.02
264 265 3.060000 TCGCGAGTGACGGTGGAT 61.060 61.111 3.71 0.00 42.83 3.41
279 280 1.153229 GGATGACGGTTAGGGTGGC 60.153 63.158 0.00 0.00 0.00 5.01
280 281 1.600107 GATGACGGTTAGGGTGGCA 59.400 57.895 0.00 0.00 0.00 4.92
283 284 3.246112 ACGGTTAGGGTGGCAGCA 61.246 61.111 19.48 0.00 0.00 4.41
286 287 1.228429 GGTTAGGGTGGCAGCAACA 60.228 57.895 19.48 0.00 0.00 3.33
287 288 1.244019 GGTTAGGGTGGCAGCAACAG 61.244 60.000 19.48 0.00 0.00 3.16
296 297 1.009829 GGCAGCAACAGACTAATCGG 58.990 55.000 0.00 0.00 0.00 4.18
319 321 0.530650 CGACGATGACAGGGAATGGG 60.531 60.000 0.00 0.00 0.00 4.00
321 323 1.274703 ACGATGACAGGGAATGGGCT 61.275 55.000 0.00 0.00 0.00 5.19
326 328 0.329596 GACAGGGAATGGGCTGAAGT 59.670 55.000 0.00 0.00 0.00 3.01
329 331 0.329596 AGGGAATGGGCTGAAGTGAC 59.670 55.000 0.00 0.00 0.00 3.67
330 332 0.038166 GGGAATGGGCTGAAGTGACA 59.962 55.000 0.00 0.00 0.00 3.58
334 337 3.119352 GGAATGGGCTGAAGTGACATTTC 60.119 47.826 3.84 3.84 32.42 2.17
335 338 1.909700 TGGGCTGAAGTGACATTTCC 58.090 50.000 8.09 0.00 0.00 3.13
358 361 3.211045 TCTCAAGGCAACCAACTAACAC 58.789 45.455 0.00 0.00 37.17 3.32
361 364 2.425312 CAAGGCAACCAACTAACACACA 59.575 45.455 0.00 0.00 37.17 3.72
364 367 3.130340 AGGCAACCAACTAACACACAAAG 59.870 43.478 0.00 0.00 37.17 2.77
387 391 1.039856 ATTTGAAAGTTGGCCGCACT 58.960 45.000 0.00 0.00 0.00 4.40
405 409 5.689514 CCGCACTGATCAATCTACTTAGAAG 59.310 44.000 0.00 0.00 35.69 2.85
414 419 7.807687 TCAATCTACTTAGAAGTACGTTTGC 57.192 36.000 0.00 0.00 40.37 3.68
415 420 6.525628 TCAATCTACTTAGAAGTACGTTTGCG 59.474 38.462 0.00 0.00 40.37 4.85
416 421 5.611796 TCTACTTAGAAGTACGTTTGCGA 57.388 39.130 0.00 0.00 40.37 5.10
423 428 1.231221 AGTACGTTTGCGAATGCCAA 58.769 45.000 5.77 0.00 41.78 4.52
426 431 1.732683 CGTTTGCGAATGCCAACCC 60.733 57.895 0.00 0.00 42.19 4.11
427 432 1.374125 GTTTGCGAATGCCAACCCC 60.374 57.895 0.00 0.00 40.01 4.95
432 437 0.963355 GCGAATGCCAACCCCTACAA 60.963 55.000 0.00 0.00 33.98 2.41
440 445 3.637694 TGCCAACCCCTACAACTAAAAAC 59.362 43.478 0.00 0.00 0.00 2.43
442 447 3.304861 CCAACCCCTACAACTAAAAACGC 60.305 47.826 0.00 0.00 0.00 4.84
447 452 3.754323 CCCTACAACTAAAAACGCCATGA 59.246 43.478 0.00 0.00 0.00 3.07
448 453 4.216687 CCCTACAACTAAAAACGCCATGAA 59.783 41.667 0.00 0.00 0.00 2.57
450 455 6.210078 CCTACAACTAAAAACGCCATGAAAA 58.790 36.000 0.00 0.00 0.00 2.29
451 456 6.866248 CCTACAACTAAAAACGCCATGAAAAT 59.134 34.615 0.00 0.00 0.00 1.82
452 457 6.763303 ACAACTAAAAACGCCATGAAAATC 57.237 33.333 0.00 0.00 0.00 2.17
453 458 5.401079 ACAACTAAAAACGCCATGAAAATCG 59.599 36.000 0.00 0.00 0.00 3.34
455 460 5.525199 ACTAAAAACGCCATGAAAATCGTT 58.475 33.333 0.00 0.00 45.51 3.85
456 461 4.965042 AAAAACGCCATGAAAATCGTTC 57.035 36.364 0.00 0.00 43.23 3.95
457 462 2.241259 AACGCCATGAAAATCGTTCG 57.759 45.000 0.00 0.00 40.57 3.95
458 463 1.153353 ACGCCATGAAAATCGTTCGT 58.847 45.000 0.00 0.00 0.00 3.85
460 465 2.347452 ACGCCATGAAAATCGTTCGTAG 59.653 45.455 0.00 0.00 0.00 3.51
461 466 2.601314 CGCCATGAAAATCGTTCGTAGA 59.399 45.455 0.00 0.00 0.00 2.59
462 467 3.245284 CGCCATGAAAATCGTTCGTAGAT 59.755 43.478 0.00 0.00 35.04 1.98
463 468 4.518217 GCCATGAAAATCGTTCGTAGATG 58.482 43.478 0.00 0.00 35.04 2.90
475 480 0.243907 CGTAGATGCCATCCTACCCG 59.756 60.000 0.00 0.00 33.52 5.28
504 509 3.510388 TCGTCAGCTATTGAAGTCCTG 57.490 47.619 0.00 0.00 37.61 3.86
512 517 7.387948 GTCAGCTATTGAAGTCCTGAAAGTAAA 59.612 37.037 0.00 0.00 37.61 2.01
556 561 4.816385 ACATACTCCAAATAGCAATCCACG 59.184 41.667 0.00 0.00 0.00 4.94
562 567 6.128007 ACTCCAAATAGCAATCCACGTAAAAG 60.128 38.462 0.00 0.00 0.00 2.27
565 570 7.040340 TCCAAATAGCAATCCACGTAAAAGAAA 60.040 33.333 0.00 0.00 0.00 2.52
566 571 7.759433 CCAAATAGCAATCCACGTAAAAGAAAT 59.241 33.333 0.00 0.00 0.00 2.17
571 576 6.879458 AGCAATCCACGTAAAAGAAATAGACT 59.121 34.615 0.00 0.00 0.00 3.24
572 577 8.038944 AGCAATCCACGTAAAAGAAATAGACTA 58.961 33.333 0.00 0.00 0.00 2.59
573 578 8.328864 GCAATCCACGTAAAAGAAATAGACTAG 58.671 37.037 0.00 0.00 0.00 2.57
574 579 9.367444 CAATCCACGTAAAAGAAATAGACTAGT 57.633 33.333 0.00 0.00 0.00 2.57
697 704 1.969256 CGTGGCGAAAAAGAACAATCG 59.031 47.619 0.00 0.00 38.28 3.34
733 740 4.958897 CCCCGGTGCCGACCAAAA 62.959 66.667 12.71 0.00 43.33 2.44
734 741 3.361977 CCCGGTGCCGACCAAAAG 61.362 66.667 12.71 0.00 43.33 2.27
735 742 4.038080 CCGGTGCCGACCAAAAGC 62.038 66.667 12.71 0.00 43.33 3.51
739 746 2.203084 TGCCGACCAAAAGCGTGA 60.203 55.556 0.00 0.00 0.00 4.35
742 749 1.503818 GCCGACCAAAAGCGTGAGAA 61.504 55.000 0.00 0.00 0.00 2.87
877 929 4.052229 CTGTCGACCGCGGTCCTT 62.052 66.667 43.58 19.65 41.76 3.36
1219 1299 2.447714 GCCCCTCTCCCCATCAGTC 61.448 68.421 0.00 0.00 0.00 3.51
1301 1381 3.246301 AGATGGATTGGATGGATCGTCT 58.754 45.455 0.00 0.00 0.00 4.18
1302 1382 3.260380 AGATGGATTGGATGGATCGTCTC 59.740 47.826 0.00 0.00 0.00 3.36
1344 1424 2.579684 AAAGGATCGTCTCTGGGCGC 62.580 60.000 0.00 0.00 0.00 6.53
1371 1452 1.638467 GCTGCGCGGATAAGAACAG 59.362 57.895 23.20 4.87 0.00 3.16
1400 1481 6.093495 TCCCGTAATGTGAATTCAGTCATTTC 59.907 38.462 22.23 17.77 33.48 2.17
1445 1526 0.531200 GTCAGATTCGACTTCCCCGT 59.469 55.000 0.00 0.00 32.92 5.28
1517 1606 1.376543 CTCAGATCAGGCGCAAACAT 58.623 50.000 10.83 0.00 0.00 2.71
1534 1623 6.454318 CGCAAACATTACAGTAGTAGAAGCAG 60.454 42.308 0.00 0.00 0.00 4.24
1562 1651 8.203485 AGAACTGTTTCCATTTAATTTTCTGCA 58.797 29.630 0.00 0.00 31.28 4.41
1713 1807 2.700773 GGGGCCTTCATGTTGCGTC 61.701 63.158 0.84 0.00 0.00 5.19
1908 2028 2.637382 TCACCATCAAGCACTCCACTTA 59.363 45.455 0.00 0.00 0.00 2.24
1985 2105 2.353958 CTGCTGTGGTCCATGCCT 59.646 61.111 14.64 0.00 0.00 4.75
1997 2117 1.837439 TCCATGCCTTGTTCTCGGTAT 59.163 47.619 0.00 0.00 0.00 2.73
2032 2153 0.815213 TTCGCAGTTGCTTGCTGTCT 60.815 50.000 2.29 0.00 41.90 3.41
2097 2218 0.389426 GCTCGCTTGACGGTTTCCTA 60.389 55.000 0.00 0.00 43.89 2.94
2098 2219 1.938016 GCTCGCTTGACGGTTTCCTAA 60.938 52.381 0.00 0.00 43.89 2.69
2111 2233 5.007332 ACGGTTTCCTAAGCTATTAAATGCG 59.993 40.000 0.00 0.00 0.00 4.73
2156 2278 3.970640 GGTTTAGGAGGAGGATGACATCT 59.029 47.826 14.95 1.59 0.00 2.90
2157 2279 4.039852 GGTTTAGGAGGAGGATGACATCTC 59.960 50.000 14.95 10.07 0.00 2.75
2158 2280 4.823364 TTAGGAGGAGGATGACATCTCT 57.177 45.455 14.95 10.21 0.00 3.10
2159 2281 2.961510 AGGAGGAGGATGACATCTCTG 58.038 52.381 14.95 0.00 0.00 3.35
2160 2282 2.517553 AGGAGGAGGATGACATCTCTGA 59.482 50.000 14.95 0.00 0.00 3.27
2161 2283 2.627699 GGAGGAGGATGACATCTCTGAC 59.372 54.545 14.95 6.34 0.00 3.51
2162 2284 3.565307 GAGGAGGATGACATCTCTGACT 58.435 50.000 14.95 10.15 0.00 3.41
2163 2285 3.298619 AGGAGGATGACATCTCTGACTG 58.701 50.000 14.95 0.00 0.00 3.51
2164 2286 3.053019 AGGAGGATGACATCTCTGACTGA 60.053 47.826 14.95 0.00 0.00 3.41
2165 2287 3.318839 GGAGGATGACATCTCTGACTGAG 59.681 52.174 14.95 3.04 43.96 3.35
2166 2288 3.298619 AGGATGACATCTCTGACTGAGG 58.701 50.000 14.95 0.00 42.86 3.86
2167 2289 3.053019 AGGATGACATCTCTGACTGAGGA 60.053 47.826 14.95 0.00 42.86 3.71
2168 2290 3.896888 GGATGACATCTCTGACTGAGGAT 59.103 47.826 14.95 0.36 42.86 3.24
2180 2302 3.245984 TGACTGAGGATGGTTTAGGAGGA 60.246 47.826 0.00 0.00 0.00 3.71
2183 2305 3.713764 CTGAGGATGGTTTAGGAGGATGT 59.286 47.826 0.00 0.00 0.00 3.06
2186 2308 3.456277 AGGATGGTTTAGGAGGATGTCAC 59.544 47.826 0.00 0.00 0.00 3.67
2195 2317 2.053244 GGAGGATGTCACCTGATGGAT 58.947 52.381 0.00 0.00 40.73 3.41
2210 2332 3.181440 TGATGGATGATGGGTTTAGGAGC 60.181 47.826 0.00 0.00 0.00 4.70
2211 2333 2.204463 TGGATGATGGGTTTAGGAGCA 58.796 47.619 0.00 0.00 0.00 4.26
2212 2334 2.173356 TGGATGATGGGTTTAGGAGCAG 59.827 50.000 0.00 0.00 0.00 4.24
2216 2338 1.559682 GATGGGTTTAGGAGCAGGACA 59.440 52.381 0.00 0.00 0.00 4.02
2218 2340 1.992557 TGGGTTTAGGAGCAGGACAAT 59.007 47.619 0.00 0.00 0.00 2.71
2244 2366 0.549169 TGGAGGGTGGGTTTAGGAGG 60.549 60.000 0.00 0.00 0.00 4.30
2278 2400 2.478292 GAGGATGGGTTTAGGAGGACA 58.522 52.381 0.00 0.00 0.00 4.02
2282 2404 3.053619 GGATGGGTTTAGGAGGACAACAT 60.054 47.826 0.00 0.00 0.00 2.71
2291 2413 3.458831 AGGAGGACAACATCTGAAGGAT 58.541 45.455 0.00 0.00 34.51 3.24
2292 2414 3.848975 AGGAGGACAACATCTGAAGGATT 59.151 43.478 0.00 0.00 31.27 3.01
2301 2423 4.047166 ACATCTGAAGGATTATGGGTCCA 58.953 43.478 0.00 0.00 38.25 4.02
2382 2504 9.788960 CTGGCCTATGTTTCTTAGAAATTAAAC 57.211 33.333 10.77 0.00 33.46 2.01
2401 2523 3.238108 ACGAGTCGAGATTTTCATGCT 57.762 42.857 21.50 0.00 0.00 3.79
2444 2566 2.890808 TCTCGCAGAACATGGATACC 57.109 50.000 0.00 0.00 34.09 2.73
2445 2567 2.107366 TCTCGCAGAACATGGATACCA 58.893 47.619 0.00 0.00 34.34 3.25
2446 2568 2.159099 TCTCGCAGAACATGGATACCAC 60.159 50.000 0.00 0.00 32.72 4.16
2447 2569 1.552792 TCGCAGAACATGGATACCACA 59.447 47.619 0.00 0.00 35.80 4.17
2448 2570 1.935873 CGCAGAACATGGATACCACAG 59.064 52.381 0.00 0.00 35.80 3.66
2449 2571 2.677902 CGCAGAACATGGATACCACAGT 60.678 50.000 0.00 0.00 35.80 3.55
2450 2572 3.347216 GCAGAACATGGATACCACAGTT 58.653 45.455 0.00 9.19 37.65 3.16
2457 2579 4.225042 ACATGGATACCACAGTTTCTGCTA 59.775 41.667 0.00 0.00 35.80 3.49
2504 2626 8.896320 TTTTGTACTACTTGATTCTGTAGCAA 57.104 30.769 13.46 9.69 39.60 3.91
2519 2641 2.885502 GCAAAGAACCTGGTTTGCG 58.114 52.632 14.28 4.38 46.49 4.85
2520 2642 0.102300 GCAAAGAACCTGGTTTGCGT 59.898 50.000 14.28 0.00 46.49 5.24
2559 2681 3.737850 GAGTTAGATCTGGCAATGAGGG 58.262 50.000 5.18 0.00 0.00 4.30
2603 2725 3.576982 ACAGCTTGCTAGTGGTAGTTGTA 59.423 43.478 0.00 0.00 31.58 2.41
2687 2813 5.086104 TGCAGAACTTGGGACTTAGATAC 57.914 43.478 0.00 0.00 0.00 2.24
2777 2906 1.378514 ATCGTGGTTGGCATGGGAC 60.379 57.895 0.00 0.00 0.00 4.46
2883 3012 8.204836 TCTCCAATGCATCATATCATATCTGAG 58.795 37.037 0.00 0.00 34.12 3.35
2918 3047 4.202419 TGCCAAACAGTACCAGATACAGTT 60.202 41.667 0.00 0.00 43.29 3.16
2944 3073 5.542635 CACTAGCCCCTTGTATCTTGGTATA 59.457 44.000 0.00 0.00 0.00 1.47
2962 3091 9.645059 CTTGGTATATAACTCATACAGTCCATG 57.355 37.037 0.00 0.00 32.30 3.66
3018 3147 6.152661 TGCGTGGTGATATCATATCTCATGTA 59.847 38.462 9.02 6.79 0.00 2.29
3019 3148 7.035612 GCGTGGTGATATCATATCTCATGTAA 58.964 38.462 9.02 0.00 0.00 2.41
3076 3205 4.749245 CCAGTGTACAATCTGGTTTCAC 57.251 45.455 19.69 0.00 44.19 3.18
3130 3259 8.845413 AAAATTGCAGGCATGACTAAATTAAA 57.155 26.923 17.50 1.74 0.00 1.52
3137 3266 8.598075 GCAGGCATGACTAAATTAAATTGAAAG 58.402 33.333 0.00 0.00 0.00 2.62
3138 3267 8.598075 CAGGCATGACTAAATTAAATTGAAAGC 58.402 33.333 0.00 0.00 0.00 3.51
3139 3268 8.534496 AGGCATGACTAAATTAAATTGAAAGCT 58.466 29.630 0.00 0.00 0.00 3.74
3140 3269 8.598075 GGCATGACTAAATTAAATTGAAAGCTG 58.402 33.333 0.00 0.00 0.00 4.24
3141 3270 9.357652 GCATGACTAAATTAAATTGAAAGCTGA 57.642 29.630 0.00 0.00 0.00 4.26
3185 3315 6.049790 GTGGACTATCTTTCTGAACCCATAC 58.950 44.000 0.00 0.00 0.00 2.39
3186 3316 5.964477 TGGACTATCTTTCTGAACCCATACT 59.036 40.000 0.00 0.00 0.00 2.12
3187 3317 6.098409 TGGACTATCTTTCTGAACCCATACTC 59.902 42.308 0.00 0.00 0.00 2.59
3188 3318 6.463190 GGACTATCTTTCTGAACCCATACTCC 60.463 46.154 0.00 0.00 0.00 3.85
3189 3319 4.779993 ATCTTTCTGAACCCATACTCCC 57.220 45.455 0.00 0.00 0.00 4.30
3191 3321 3.775316 TCTTTCTGAACCCATACTCCCTC 59.225 47.826 0.00 0.00 0.00 4.30
3192 3322 2.176247 TCTGAACCCATACTCCCTCC 57.824 55.000 0.00 0.00 0.00 4.30
3193 3323 1.364678 TCTGAACCCATACTCCCTCCA 59.635 52.381 0.00 0.00 0.00 3.86
3195 3325 2.370189 CTGAACCCATACTCCCTCCATC 59.630 54.545 0.00 0.00 0.00 3.51
3196 3326 2.022035 TGAACCCATACTCCCTCCATCT 60.022 50.000 0.00 0.00 0.00 2.90
3197 3327 2.407340 ACCCATACTCCCTCCATCTC 57.593 55.000 0.00 0.00 0.00 2.75
3198 3328 1.580658 ACCCATACTCCCTCCATCTCA 59.419 52.381 0.00 0.00 0.00 3.27
3199 3329 2.183210 ACCCATACTCCCTCCATCTCAT 59.817 50.000 0.00 0.00 0.00 2.90
3200 3330 3.406152 ACCCATACTCCCTCCATCTCATA 59.594 47.826 0.00 0.00 0.00 2.15
3201 3331 4.140447 ACCCATACTCCCTCCATCTCATAA 60.140 45.833 0.00 0.00 0.00 1.90
3202 3332 5.035556 CCCATACTCCCTCCATCTCATAAT 58.964 45.833 0.00 0.00 0.00 1.28
3203 3333 6.205298 CCCATACTCCCTCCATCTCATAATA 58.795 44.000 0.00 0.00 0.00 0.98
3204 3334 6.848631 CCCATACTCCCTCCATCTCATAATAT 59.151 42.308 0.00 0.00 0.00 1.28
3205 3335 8.013072 CCCATACTCCCTCCATCTCATAATATA 58.987 40.741 0.00 0.00 0.00 0.86
3206 3336 9.439461 CCATACTCCCTCCATCTCATAATATAA 57.561 37.037 0.00 0.00 0.00 0.98
3209 3339 8.837099 ACTCCCTCCATCTCATAATATAAGAG 57.163 38.462 0.00 0.00 0.00 2.85
3210 3340 8.405850 ACTCCCTCCATCTCATAATATAAGAGT 58.594 37.037 0.00 0.00 0.00 3.24
3211 3341 8.601047 TCCCTCCATCTCATAATATAAGAGTG 57.399 38.462 0.00 0.00 0.00 3.51
3212 3342 8.180165 TCCCTCCATCTCATAATATAAGAGTGT 58.820 37.037 0.00 0.00 0.00 3.55
3213 3343 8.820831 CCCTCCATCTCATAATATAAGAGTGTT 58.179 37.037 0.00 0.00 0.00 3.32
3231 3361 4.955925 TGTTTTTGACACTACACTGGTG 57.044 40.909 0.00 0.00 40.19 4.17
3239 3369 3.793559 ACACTACACTGGTGTCAGAAAC 58.206 45.455 9.77 0.00 43.35 2.78
3240 3370 2.794910 CACTACACTGGTGTCAGAAACG 59.205 50.000 9.77 0.00 43.74 3.60
3241 3371 1.792949 CTACACTGGTGTCAGAAACGC 59.207 52.381 9.77 0.00 43.74 4.84
3242 3372 0.178068 ACACTGGTGTCAGAAACGCT 59.822 50.000 0.01 0.00 43.49 5.07
3243 3373 0.861837 CACTGGTGTCAGAAACGCTC 59.138 55.000 0.00 0.00 43.49 5.03
3244 3374 0.753262 ACTGGTGTCAGAAACGCTCT 59.247 50.000 0.00 0.00 43.49 4.09
3245 3375 1.139058 ACTGGTGTCAGAAACGCTCTT 59.861 47.619 0.00 0.00 43.49 2.85
3246 3376 2.364324 ACTGGTGTCAGAAACGCTCTTA 59.636 45.455 0.00 0.00 43.49 2.10
3247 3377 3.006967 ACTGGTGTCAGAAACGCTCTTAT 59.993 43.478 0.00 0.00 43.49 1.73
3248 3378 4.219944 ACTGGTGTCAGAAACGCTCTTATA 59.780 41.667 0.00 0.00 43.49 0.98
3249 3379 5.105310 ACTGGTGTCAGAAACGCTCTTATAT 60.105 40.000 0.00 0.00 43.49 0.86
3250 3380 5.730550 TGGTGTCAGAAACGCTCTTATATT 58.269 37.500 0.00 0.00 38.49 1.28
3251 3381 6.869695 TGGTGTCAGAAACGCTCTTATATTA 58.130 36.000 0.00 0.00 38.49 0.98
3252 3382 7.497595 TGGTGTCAGAAACGCTCTTATATTAT 58.502 34.615 0.00 0.00 38.49 1.28
3253 3383 7.438160 TGGTGTCAGAAACGCTCTTATATTATG 59.562 37.037 0.00 0.00 38.49 1.90
3254 3384 7.095607 GGTGTCAGAAACGCTCTTATATTATGG 60.096 40.741 0.00 0.00 38.49 2.74
3255 3385 6.929049 TGTCAGAAACGCTCTTATATTATGGG 59.071 38.462 0.00 0.00 29.07 4.00
3256 3386 7.152645 GTCAGAAACGCTCTTATATTATGGGA 58.847 38.462 0.00 0.00 29.07 4.37
3257 3387 7.819900 GTCAGAAACGCTCTTATATTATGGGAT 59.180 37.037 0.00 0.00 29.07 3.85
3258 3388 7.819415 TCAGAAACGCTCTTATATTATGGGATG 59.181 37.037 0.00 0.00 29.07 3.51
3259 3389 7.065085 CAGAAACGCTCTTATATTATGGGATGG 59.935 40.741 0.00 0.00 29.07 3.51
3260 3390 6.620877 AACGCTCTTATATTATGGGATGGA 57.379 37.500 0.00 0.00 0.00 3.41
3261 3391 6.227298 ACGCTCTTATATTATGGGATGGAG 57.773 41.667 0.00 0.00 0.00 3.86
3262 3392 5.129485 ACGCTCTTATATTATGGGATGGAGG 59.871 44.000 0.00 0.00 0.00 4.30
3263 3393 5.453903 CGCTCTTATATTATGGGATGGAGGG 60.454 48.000 0.00 0.00 0.00 4.30
3264 3394 5.667626 GCTCTTATATTATGGGATGGAGGGA 59.332 44.000 0.00 0.00 0.00 4.20
3265 3395 6.183361 GCTCTTATATTATGGGATGGAGGGAG 60.183 46.154 0.00 0.00 0.00 4.30
3288 3418 9.368674 GGAGTACCTTTTTCTTAGAAGTCATAC 57.631 37.037 0.00 0.00 0.00 2.39
3295 3425 7.647907 TTTTCTTAGAAGTCATACGTTCCAC 57.352 36.000 0.00 0.00 0.00 4.02
3379 3510 1.227497 CTCCATCGCTTCTGGGCTC 60.227 63.158 0.00 0.00 34.36 4.70
3380 3511 1.964608 CTCCATCGCTTCTGGGCTCA 61.965 60.000 0.00 0.00 34.36 4.26
3461 3592 9.030452 TGTTTTTCCAGGTTATATGTGCTATTT 57.970 29.630 0.00 0.00 0.00 1.40
3471 3606 9.965824 GGTTATATGTGCTATTTACTGCAAATT 57.034 29.630 0.00 0.00 41.10 1.82
3509 3644 7.658261 AGTTTGGTTGTTAATTTTCTAGAGCC 58.342 34.615 0.00 0.00 0.00 4.70
3562 3697 5.491323 TGTGAATTACATGGGTGTGTCTA 57.509 39.130 0.00 0.00 39.39 2.59
3629 3767 6.098679 TGTGTTTGTTTTGCATGATATAGGC 58.901 36.000 0.00 0.00 36.42 3.93
3643 3781 8.143835 GCATGATATAGGCAAATAACTGGTTTT 58.856 33.333 0.00 0.00 35.80 2.43
3650 3788 9.700831 ATAGGCAAATAACTGGTTTTAATCTCT 57.299 29.630 0.00 0.00 0.00 3.10
3652 3790 9.178758 AGGCAAATAACTGGTTTTAATCTCTAG 57.821 33.333 0.00 0.00 0.00 2.43
3653 3791 9.174166 GGCAAATAACTGGTTTTAATCTCTAGA 57.826 33.333 0.00 0.00 0.00 2.43
3660 3798 7.536855 ACTGGTTTTAATCTCTAGAGTACACG 58.463 38.462 19.21 0.00 0.00 4.49
3661 3799 7.392673 ACTGGTTTTAATCTCTAGAGTACACGA 59.607 37.037 19.21 0.00 0.00 4.35
3683 3825 5.007332 CGACTAGTATTTACCATTGCAACCC 59.993 44.000 0.00 0.00 0.00 4.11
3746 3888 7.716560 CACATCAACATATATGTCTTCTCCCAA 59.283 37.037 18.52 0.00 40.80 4.12
3780 3922 3.274288 CCTAAAGCAGGTGATGGAGTTC 58.726 50.000 0.00 0.00 39.91 3.01
3848 3990 3.269178 CAGGATTGAGAGCAAGAAGACC 58.731 50.000 0.00 0.00 37.45 3.85
4247 4389 1.135094 ATAGGCATGGTGACCTCCTG 58.865 55.000 16.85 7.69 37.50 3.86
4365 4507 7.500141 ACAGCTTTCTTCAACCATTTTATTGT 58.500 30.769 0.00 0.00 0.00 2.71
4379 4521 6.538381 CCATTTTATTGTCCATTTTACTGCCC 59.462 38.462 0.00 0.00 0.00 5.36
4391 4533 6.369615 CCATTTTACTGCCCATCTTTTTGAAG 59.630 38.462 0.00 0.00 0.00 3.02
4398 4540 4.176271 GCCCATCTTTTTGAAGCACATAC 58.824 43.478 0.00 0.00 0.00 2.39
4424 4566 5.385509 TTTGCTTGTTAATGCTTCTACCC 57.614 39.130 0.00 0.00 0.00 3.69
4432 4574 5.163237 TGTTAATGCTTCTACCCTACCCATC 60.163 44.000 0.00 0.00 0.00 3.51
4442 4584 3.588569 ACCCTACCCATCTTTAGCTAGG 58.411 50.000 0.00 0.00 0.00 3.02
4452 4594 5.513788 CCATCTTTAGCTAGGTGGCATGTAT 60.514 44.000 2.78 0.00 39.45 2.29
4487 4633 6.713903 TGCTCTCATGAAATTCTTTTGAGAGT 59.286 34.615 29.21 0.00 45.51 3.24
4493 4639 7.607991 TCATGAAATTCTTTTGAGAGTACCTCC 59.392 37.037 0.00 0.00 41.25 4.30
4509 4656 6.644347 AGTACCTCCAAGACAGTAAATCATG 58.356 40.000 0.00 0.00 0.00 3.07
4510 4657 5.505181 ACCTCCAAGACAGTAAATCATGT 57.495 39.130 0.00 0.00 0.00 3.21
4511 4658 5.880901 ACCTCCAAGACAGTAAATCATGTT 58.119 37.500 0.00 0.00 0.00 2.71
4512 4659 6.306987 ACCTCCAAGACAGTAAATCATGTTT 58.693 36.000 0.00 0.00 0.00 2.83
4513 4660 7.458397 ACCTCCAAGACAGTAAATCATGTTTA 58.542 34.615 0.00 0.00 0.00 2.01
4514 4661 7.942341 ACCTCCAAGACAGTAAATCATGTTTAA 59.058 33.333 0.00 0.00 0.00 1.52
4515 4662 8.792633 CCTCCAAGACAGTAAATCATGTTTAAA 58.207 33.333 0.00 0.00 0.00 1.52
4576 4723 6.822170 TGAGACATCTTCCAATTGATTCTCTG 59.178 38.462 7.12 0.07 33.41 3.35
4578 4725 4.643784 ACATCTTCCAATTGATTCTCTGCC 59.356 41.667 7.12 0.00 0.00 4.85
4581 4728 4.703575 TCTTCCAATTGATTCTCTGCCTTG 59.296 41.667 7.12 0.00 0.00 3.61
4582 4729 3.359033 TCCAATTGATTCTCTGCCTTGG 58.641 45.455 7.12 0.00 34.37 3.61
4596 4748 1.073284 GCCTTGGACCACCTTGAACTA 59.927 52.381 0.00 0.00 37.04 2.24
4604 4756 5.300792 TGGACCACCTTGAACTATTTTGTTC 59.699 40.000 0.00 0.00 40.52 3.18
4623 4775 1.347378 TCATGTTGGCTACTGCACAGA 59.653 47.619 4.31 0.00 41.91 3.41
4625 4777 0.758734 TGTTGGCTACTGCACAGAGT 59.241 50.000 4.31 0.00 41.91 3.24
4626 4778 1.140852 TGTTGGCTACTGCACAGAGTT 59.859 47.619 4.31 0.00 41.91 3.01
4649 4982 9.998106 AGTTCTGTATGTAAAACTGACTTATGT 57.002 29.630 0.00 0.00 31.05 2.29
4701 5034 4.163078 AGGACAGAGAACAACCCATATCTG 59.837 45.833 0.00 0.00 39.96 2.90
4734 5067 1.004560 CTCCTTCCAAGAGCGTGCA 60.005 57.895 0.00 0.00 0.00 4.57
4746 5079 0.674895 AGCGTGCAACCTTCATCTCC 60.675 55.000 0.00 0.00 0.00 3.71
4860 5193 4.005650 AGACTGCATACACCAAGATTGTG 58.994 43.478 0.00 0.00 0.00 3.33
4884 5217 5.176741 AGAAGCTGTTTGAGATTGATCCT 57.823 39.130 0.00 0.00 27.54 3.24
4932 5265 3.133542 ACATGATGAGGAAGAAGATCGCA 59.866 43.478 0.00 0.00 0.00 5.10
4938 5271 1.065199 AGGAAGAAGATCGCAATGCCA 60.065 47.619 0.00 0.00 0.00 4.92
4953 5286 1.607467 GCCAGCCCACCTGATGTTT 60.607 57.895 0.00 0.00 44.64 2.83
5073 5406 2.936032 GGCAGGTGGAAGGTCCCT 60.936 66.667 0.00 0.00 35.03 4.20
5088 5421 2.750350 CCTGAACTGACCGGCCTT 59.250 61.111 0.00 0.00 0.00 4.35
5133 5466 3.075005 TACCTCTGCACCCTCGCC 61.075 66.667 0.00 0.00 0.00 5.54
5214 5547 1.207791 CCTTCAGCTGGGTCTATGGT 58.792 55.000 15.13 0.00 0.00 3.55
5375 5721 0.104304 AGTTCAGGTTCGTCGTTGCT 59.896 50.000 0.00 0.00 0.00 3.91
5384 5730 1.774639 TCGTCGTTGCTGTTCCTTAC 58.225 50.000 0.00 0.00 0.00 2.34
5386 5732 2.066262 CGTCGTTGCTGTTCCTTACAT 58.934 47.619 0.00 0.00 35.85 2.29
5387 5733 3.057386 TCGTCGTTGCTGTTCCTTACATA 60.057 43.478 0.00 0.00 35.85 2.29
5389 5735 4.243270 GTCGTTGCTGTTCCTTACATAGT 58.757 43.478 0.00 0.00 35.85 2.12
5391 5737 4.927425 TCGTTGCTGTTCCTTACATAGTTC 59.073 41.667 0.00 0.00 35.85 3.01
5392 5738 4.688879 CGTTGCTGTTCCTTACATAGTTCA 59.311 41.667 0.00 0.00 35.85 3.18
5522 5886 6.238814 CCCTTAAGTTTTGTGACCAATAACGT 60.239 38.462 0.97 0.00 32.08 3.99
5590 5963 1.410882 GATCACTCACTGGTAGAGGGC 59.589 57.143 0.00 0.00 36.47 5.19
5651 6038 5.368989 TCTATCTGAGACAGCTACGATTCA 58.631 41.667 0.00 0.00 0.00 2.57
5663 6050 0.320771 ACGATTCAGCCAGTGGTGTC 60.321 55.000 11.74 1.59 40.84 3.67
5682 6069 5.509840 GGTGTCTCCGTATCTGCATAAATCT 60.510 44.000 0.00 0.00 0.00 2.40
5685 6072 5.403766 GTCTCCGTATCTGCATAAATCTGTG 59.596 44.000 0.00 0.00 0.00 3.66
5692 6079 4.842574 TCTGCATAAATCTGTGGTTGCTA 58.157 39.130 0.00 0.00 0.00 3.49
5696 6083 4.580167 GCATAAATCTGTGGTTGCTATCCA 59.420 41.667 0.00 0.00 0.00 3.41
5704 6091 4.139038 TGTGGTTGCTATCCATCATGATG 58.861 43.478 25.97 25.97 37.30 3.07
5717 6104 3.457610 TCATGATGTGCTCGATTGCTA 57.542 42.857 0.00 0.00 0.00 3.49
5718 6105 3.126073 TCATGATGTGCTCGATTGCTAC 58.874 45.455 0.00 0.00 0.00 3.58
5751 6138 0.388391 CCAAATGCGTGCCATCGTTT 60.388 50.000 0.00 0.00 31.43 3.60
5769 6156 5.406649 TCGTTTGTGCATTTCAAAGAAAGT 58.593 33.333 1.51 0.00 35.83 2.66
5795 6182 3.073022 CGTACGCGCTAAAATATGCTC 57.927 47.619 5.73 0.00 0.00 4.26
5798 6185 0.451135 CGCGCTAAAATATGCTCGGC 60.451 55.000 5.56 0.00 34.36 5.54
5809 6196 2.027751 GCTCGGCATAGACGGGTC 59.972 66.667 0.00 0.00 36.60 4.46
5894 6281 0.951040 GTGCAAGTTGAGGACCGAGG 60.951 60.000 7.16 0.00 0.00 4.63
5947 6376 4.715983 GCCATTTGCAGCATACGG 57.284 55.556 0.00 0.00 40.77 4.02
5980 6416 3.004171 TGCCATTCATCAAGCATTTTGC 58.996 40.909 0.00 0.00 45.46 3.68
5986 6422 6.439599 CATTCATCAAGCATTTTGCCAAAAA 58.560 32.000 6.70 0.00 46.52 1.94
6008 6444 6.391227 AAACGGATTCTGAAAATGTCTGTT 57.609 33.333 9.16 9.16 39.39 3.16
6009 6445 6.391227 AACGGATTCTGAAAATGTCTGTTT 57.609 33.333 9.16 0.00 35.49 2.83
6010 6446 7.504924 AACGGATTCTGAAAATGTCTGTTTA 57.495 32.000 9.16 0.00 35.49 2.01
6012 6448 6.149474 ACGGATTCTGAAAATGTCTGTTTAGG 59.851 38.462 0.00 0.00 0.00 2.69
6013 6449 6.371548 CGGATTCTGAAAATGTCTGTTTAGGA 59.628 38.462 0.00 0.00 0.00 2.94
6014 6450 7.066284 CGGATTCTGAAAATGTCTGTTTAGGAT 59.934 37.037 0.00 0.00 0.00 3.24
6015 6451 9.396022 GGATTCTGAAAATGTCTGTTTAGGATA 57.604 33.333 0.00 0.00 0.00 2.59
6052 6491 2.893637 ACCGAGTCAGATCGAAAATGG 58.106 47.619 0.00 0.00 45.56 3.16
6055 6494 2.159099 CGAGTCAGATCGAAAATGGGGA 60.159 50.000 0.00 0.00 45.56 4.81
6069 6508 0.031616 TGGGGACAAACCAAAAGCCT 60.032 50.000 0.00 0.00 41.20 4.58
6070 6509 0.392706 GGGGACAAACCAAAAGCCTG 59.607 55.000 0.00 0.00 41.20 4.85
6071 6510 0.249868 GGGACAAACCAAAAGCCTGC 60.250 55.000 0.00 0.00 41.20 4.85
6072 6511 0.463620 GGACAAACCAAAAGCCTGCA 59.536 50.000 0.00 0.00 38.79 4.41
6073 6512 1.134551 GGACAAACCAAAAGCCTGCAA 60.135 47.619 0.00 0.00 38.79 4.08
6081 6520 2.160813 CCAAAAGCCTGCAATGCAAATC 59.839 45.455 9.92 1.05 38.41 2.17
6083 6522 1.272807 AAGCCTGCAATGCAAATCCT 58.727 45.000 9.92 0.08 38.41 3.24
6091 6530 4.500127 TGCAATGCAAATCCTGAAATGAG 58.500 39.130 5.01 0.00 34.76 2.90
6093 6532 4.500127 CAATGCAAATCCTGAAATGAGCA 58.500 39.130 0.00 0.00 35.03 4.26
6095 6534 4.811969 TGCAAATCCTGAAATGAGCAAT 57.188 36.364 0.00 0.00 0.00 3.56
6123 6562 1.375908 GCCATCACCGTGCTCTCAA 60.376 57.895 0.00 0.00 0.00 3.02
6124 6563 0.745845 GCCATCACCGTGCTCTCAAT 60.746 55.000 0.00 0.00 0.00 2.57
6136 6575 5.140177 CGTGCTCTCAATAGTGAAAACAAC 58.860 41.667 0.00 0.00 31.88 3.32
6137 6576 5.050091 CGTGCTCTCAATAGTGAAAACAACT 60.050 40.000 0.00 0.00 31.88 3.16
6138 6577 6.138761 GTGCTCTCAATAGTGAAAACAACTG 58.861 40.000 0.00 0.00 31.88 3.16
6139 6578 5.822519 TGCTCTCAATAGTGAAAACAACTGT 59.177 36.000 0.00 0.00 31.88 3.55
6140 6579 6.138761 GCTCTCAATAGTGAAAACAACTGTG 58.861 40.000 0.00 0.00 31.88 3.66
6141 6580 6.017934 GCTCTCAATAGTGAAAACAACTGTGA 60.018 38.462 0.00 0.00 31.88 3.58
6142 6581 7.482654 TCTCAATAGTGAAAACAACTGTGAG 57.517 36.000 0.00 10.51 39.78 3.51
6425 6867 1.066573 CATCCTCCGTTCTGTTCAGCT 60.067 52.381 0.00 0.00 0.00 4.24
6463 6908 0.534203 ACACGTGGCGTCAAGGAAAT 60.534 50.000 21.57 0.00 38.32 2.17
6473 6918 0.467290 TCAAGGAAATATGCCGGGCC 60.467 55.000 17.97 0.00 0.00 5.80
6490 6935 0.892814 GCCTCAGTCCAAGCAAAGCT 60.893 55.000 0.00 0.00 42.56 3.74
6498 6943 4.094590 CAGTCCAAGCAAAGCTTCTATCTG 59.905 45.833 0.00 0.00 46.77 2.90
6521 6966 3.357079 GCACCAGTTGGCCTGACG 61.357 66.667 3.32 0.00 44.49 4.35
6522 6967 2.669569 CACCAGTTGGCCTGACGG 60.670 66.667 3.32 10.98 44.49 4.79
6523 6968 2.847234 ACCAGTTGGCCTGACGGA 60.847 61.111 19.19 0.00 44.49 4.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 5.676532 TCCGAGCGAGAAAACATTAAAAA 57.323 34.783 0.00 0.00 0.00 1.94
10 11 5.873179 ATCCGAGCGAGAAAACATTAAAA 57.127 34.783 0.00 0.00 0.00 1.52
11 12 6.984474 AGATATCCGAGCGAGAAAACATTAAA 59.016 34.615 0.00 0.00 0.00 1.52
12 13 6.513180 AGATATCCGAGCGAGAAAACATTAA 58.487 36.000 0.00 0.00 0.00 1.40
13 14 6.085555 AGATATCCGAGCGAGAAAACATTA 57.914 37.500 0.00 0.00 0.00 1.90
14 15 4.950050 AGATATCCGAGCGAGAAAACATT 58.050 39.130 0.00 0.00 0.00 2.71
15 16 4.592485 AGATATCCGAGCGAGAAAACAT 57.408 40.909 0.00 0.00 0.00 2.71
16 17 4.386867 AAGATATCCGAGCGAGAAAACA 57.613 40.909 0.00 0.00 0.00 2.83
17 18 5.291128 TGAAAAGATATCCGAGCGAGAAAAC 59.709 40.000 0.00 0.00 0.00 2.43
22 23 3.312828 CCTGAAAAGATATCCGAGCGAG 58.687 50.000 0.00 0.00 0.00 5.03
24 25 1.795286 GCCTGAAAAGATATCCGAGCG 59.205 52.381 0.00 0.00 0.00 5.03
33 34 5.859205 AAAAACACTCTGCCTGAAAAGAT 57.141 34.783 0.00 0.00 0.00 2.40
39 40 2.878406 GCAGTAAAAACACTCTGCCTGA 59.122 45.455 4.90 0.00 44.84 3.86
46 47 4.202111 ACCACAATGGCAGTAAAAACACTC 60.202 41.667 0.00 0.00 42.67 3.51
47 48 3.704061 ACCACAATGGCAGTAAAAACACT 59.296 39.130 0.00 0.00 42.67 3.55
48 49 4.053469 ACCACAATGGCAGTAAAAACAC 57.947 40.909 0.00 0.00 42.67 3.32
51 52 5.344743 TCAAACCACAATGGCAGTAAAAA 57.655 34.783 0.00 0.00 42.67 1.94
54 55 5.295950 CAAATCAAACCACAATGGCAGTAA 58.704 37.500 0.00 0.00 42.67 2.24
56 57 3.731089 CAAATCAAACCACAATGGCAGT 58.269 40.909 0.00 0.00 42.67 4.40
57 58 2.481185 GCAAATCAAACCACAATGGCAG 59.519 45.455 0.00 0.00 42.67 4.85
61 62 4.370049 TGTCTGCAAATCAAACCACAATG 58.630 39.130 0.00 0.00 0.00 2.82
65 66 2.622942 TCCTGTCTGCAAATCAAACCAC 59.377 45.455 0.00 0.00 0.00 4.16
80 81 2.231964 TGCATTGCTCCATTTTCCTGTC 59.768 45.455 10.49 0.00 0.00 3.51
82 83 2.232941 ACTGCATTGCTCCATTTTCCTG 59.767 45.455 10.49 0.00 0.00 3.86
83 84 2.532843 ACTGCATTGCTCCATTTTCCT 58.467 42.857 10.49 0.00 0.00 3.36
89 90 1.760192 GGAGAACTGCATTGCTCCAT 58.240 50.000 23.21 0.00 44.91 3.41
90 91 0.674581 CGGAGAACTGCATTGCTCCA 60.675 55.000 26.34 0.00 45.65 3.86
92 93 1.427020 GCGGAGAACTGCATTGCTC 59.573 57.895 10.49 3.37 46.56 4.26
99 100 2.564553 ATCCTCGTGCGGAGAACTGC 62.565 60.000 6.19 0.00 46.23 4.40
112 113 1.472376 GCCCTCTCAAGTCAATCCTCG 60.472 57.143 0.00 0.00 0.00 4.63
145 146 4.407296 ACCATCCTCTAACACCTCTTCATC 59.593 45.833 0.00 0.00 0.00 2.92
147 148 3.791320 ACCATCCTCTAACACCTCTTCA 58.209 45.455 0.00 0.00 0.00 3.02
150 151 3.261897 CACAACCATCCTCTAACACCTCT 59.738 47.826 0.00 0.00 0.00 3.69
159 160 2.671070 CCGCCACAACCATCCTCT 59.329 61.111 0.00 0.00 0.00 3.69
178 179 3.764466 CTCGACCGCCAAGCCTCT 61.764 66.667 0.00 0.00 0.00 3.69
196 197 3.997021 CTGTCTCATTTTGCCTTAGTCGT 59.003 43.478 0.00 0.00 0.00 4.34
256 257 1.610554 CCCTAACCGTCATCCACCGT 61.611 60.000 0.00 0.00 0.00 4.83
259 260 0.107848 CCACCCTAACCGTCATCCAC 60.108 60.000 0.00 0.00 0.00 4.02
263 264 1.602237 CTGCCACCCTAACCGTCAT 59.398 57.895 0.00 0.00 0.00 3.06
264 265 3.065306 CTGCCACCCTAACCGTCA 58.935 61.111 0.00 0.00 0.00 4.35
279 280 1.725641 TGCCGATTAGTCTGTTGCTG 58.274 50.000 0.00 0.00 0.00 4.41
280 281 2.076863 GTTGCCGATTAGTCTGTTGCT 58.923 47.619 0.00 0.00 0.00 3.91
283 284 2.334838 GTCGTTGCCGATTAGTCTGTT 58.665 47.619 0.00 0.00 46.30 3.16
286 287 0.806868 TCGTCGTTGCCGATTAGTCT 59.193 50.000 0.00 0.00 46.30 3.24
287 288 1.517276 CATCGTCGTTGCCGATTAGTC 59.483 52.381 0.00 0.00 46.30 2.59
296 297 0.669318 TTCCCTGTCATCGTCGTTGC 60.669 55.000 0.00 0.00 0.00 4.17
302 303 1.224592 GCCCATTCCCTGTCATCGT 59.775 57.895 0.00 0.00 0.00 3.73
305 306 1.002069 TTCAGCCCATTCCCTGTCAT 58.998 50.000 0.00 0.00 0.00 3.06
306 307 0.329261 CTTCAGCCCATTCCCTGTCA 59.671 55.000 0.00 0.00 0.00 3.58
309 310 0.329261 TCACTTCAGCCCATTCCCTG 59.671 55.000 0.00 0.00 0.00 4.45
319 321 4.067896 TGAGAAGGAAATGTCACTTCAGC 58.932 43.478 13.45 7.78 42.24 4.26
335 338 3.882888 TGTTAGTTGGTTGCCTTGAGAAG 59.117 43.478 0.00 0.00 0.00 2.85
349 352 8.459521 TTCAAATTGACTTTGTGTGTTAGTTG 57.540 30.769 0.00 0.00 43.90 3.16
358 361 5.220643 GGCCAACTTTCAAATTGACTTTGTG 60.221 40.000 0.00 0.00 43.90 3.33
361 364 4.119136 CGGCCAACTTTCAAATTGACTTT 58.881 39.130 2.24 0.00 0.00 2.66
364 367 1.792367 GCGGCCAACTTTCAAATTGAC 59.208 47.619 2.24 0.00 0.00 3.18
382 386 6.269315 ACTTCTAAGTAGATTGATCAGTGCG 58.731 40.000 0.00 0.00 37.52 5.34
387 391 9.569167 CAAACGTACTTCTAAGTAGATTGATCA 57.431 33.333 2.83 0.00 41.81 2.92
405 409 1.323791 GTTGGCATTCGCAAACGTAC 58.676 50.000 0.00 0.00 42.10 3.67
414 419 0.808755 GTTGTAGGGGTTGGCATTCG 59.191 55.000 0.00 0.00 0.00 3.34
415 420 2.215942 AGTTGTAGGGGTTGGCATTC 57.784 50.000 0.00 0.00 0.00 2.67
416 421 3.818295 TTAGTTGTAGGGGTTGGCATT 57.182 42.857 0.00 0.00 0.00 3.56
423 428 2.158638 TGGCGTTTTTAGTTGTAGGGGT 60.159 45.455 0.00 0.00 0.00 4.95
426 431 5.365403 TTCATGGCGTTTTTAGTTGTAGG 57.635 39.130 0.00 0.00 0.00 3.18
427 432 7.201232 CGATTTTCATGGCGTTTTTAGTTGTAG 60.201 37.037 0.00 0.00 0.00 2.74
432 437 5.116069 ACGATTTTCATGGCGTTTTTAGT 57.884 34.783 0.00 0.00 32.42 2.24
440 445 2.601314 TCTACGAACGATTTTCATGGCG 59.399 45.455 0.14 0.00 0.00 5.69
442 447 4.518217 GCATCTACGAACGATTTTCATGG 58.482 43.478 0.14 0.00 0.00 3.66
447 452 3.560068 GGATGGCATCTACGAACGATTTT 59.440 43.478 25.48 0.00 0.00 1.82
448 453 3.131396 GGATGGCATCTACGAACGATTT 58.869 45.455 25.48 0.00 0.00 2.17
450 455 1.964223 AGGATGGCATCTACGAACGAT 59.036 47.619 25.48 0.25 0.00 3.73
451 456 1.399714 AGGATGGCATCTACGAACGA 58.600 50.000 25.48 0.00 0.00 3.85
452 457 2.607282 GGTAGGATGGCATCTACGAACG 60.607 54.545 25.48 0.00 37.35 3.95
453 458 2.288886 GGGTAGGATGGCATCTACGAAC 60.289 54.545 25.48 15.65 37.35 3.95
455 460 1.629043 GGGTAGGATGGCATCTACGA 58.371 55.000 25.48 5.05 37.35 3.43
456 461 0.243907 CGGGTAGGATGGCATCTACG 59.756 60.000 25.48 17.86 37.35 3.51
457 462 0.608640 CCGGGTAGGATGGCATCTAC 59.391 60.000 25.48 22.14 45.00 2.59
458 463 3.067011 CCGGGTAGGATGGCATCTA 57.933 57.895 25.48 13.58 45.00 1.98
463 468 3.857038 TTCGCCGGGTAGGATGGC 61.857 66.667 2.18 0.00 45.00 4.40
525 530 9.899661 ATTGCTATTTGGAGTATGTGTTAACTA 57.100 29.630 7.22 0.00 0.00 2.24
526 531 8.807948 ATTGCTATTTGGAGTATGTGTTAACT 57.192 30.769 7.22 0.00 0.00 2.24
527 532 8.129211 GGATTGCTATTTGGAGTATGTGTTAAC 58.871 37.037 0.00 0.00 0.00 2.01
529 534 7.282224 GTGGATTGCTATTTGGAGTATGTGTTA 59.718 37.037 0.00 0.00 0.00 2.41
530 535 6.095440 GTGGATTGCTATTTGGAGTATGTGTT 59.905 38.462 0.00 0.00 0.00 3.32
531 536 5.590259 GTGGATTGCTATTTGGAGTATGTGT 59.410 40.000 0.00 0.00 0.00 3.72
532 537 5.277490 CGTGGATTGCTATTTGGAGTATGTG 60.277 44.000 0.00 0.00 0.00 3.21
533 538 4.816385 CGTGGATTGCTATTTGGAGTATGT 59.184 41.667 0.00 0.00 0.00 2.29
534 539 4.816385 ACGTGGATTGCTATTTGGAGTATG 59.184 41.667 0.00 0.00 0.00 2.39
535 540 5.036117 ACGTGGATTGCTATTTGGAGTAT 57.964 39.130 0.00 0.00 0.00 2.12
536 541 4.481368 ACGTGGATTGCTATTTGGAGTA 57.519 40.909 0.00 0.00 0.00 2.59
537 542 3.350219 ACGTGGATTGCTATTTGGAGT 57.650 42.857 0.00 0.00 0.00 3.85
540 545 6.189677 TCTTTTACGTGGATTGCTATTTGG 57.810 37.500 0.00 0.00 0.00 3.28
547 552 7.073342 AGTCTATTTCTTTTACGTGGATTGC 57.927 36.000 0.00 0.00 0.00 3.56
572 577 9.847224 TCCTTTTCTTCTTCACTGTTTATTACT 57.153 29.630 0.00 0.00 0.00 2.24
574 579 9.847224 ACTCCTTTTCTTCTTCACTGTTTATTA 57.153 29.630 0.00 0.00 0.00 0.98
575 580 8.624776 CACTCCTTTTCTTCTTCACTGTTTATT 58.375 33.333 0.00 0.00 0.00 1.40
590 595 3.425162 AGGCGATTTCACTCCTTTTCT 57.575 42.857 0.00 0.00 0.00 2.52
596 601 3.596214 TCAGTAAAGGCGATTTCACTCC 58.404 45.455 0.00 0.00 32.01 3.85
629 634 4.252971 TCTTAAAGTGGAGGACAAGTCG 57.747 45.455 0.00 0.00 0.00 4.18
801 853 1.804748 CGCCCTTATTTATTCCTCGCC 59.195 52.381 0.00 0.00 0.00 5.54
876 928 2.813726 CGGTGTCAGTGTGGGGGAA 61.814 63.158 0.00 0.00 0.00 3.97
877 929 3.238497 CGGTGTCAGTGTGGGGGA 61.238 66.667 0.00 0.00 0.00 4.81
973 1048 1.372748 GAGGAGAGATGCCGATGCG 60.373 63.158 0.00 0.00 41.78 4.73
974 1049 1.372748 CGAGGAGAGATGCCGATGC 60.373 63.158 0.00 0.00 38.26 3.91
1074 1149 2.114838 GCCATCCTGGAGGCCATC 59.885 66.667 20.16 0.00 45.18 3.51
1219 1299 1.509923 GGGGTAGAACACGAGACGG 59.490 63.158 0.00 0.00 0.00 4.79
1323 1403 1.676014 CGCCCAGAGACGATCCTTTTT 60.676 52.381 0.00 0.00 0.00 1.94
1324 1404 0.108138 CGCCCAGAGACGATCCTTTT 60.108 55.000 0.00 0.00 0.00 2.27
1325 1405 1.517832 CGCCCAGAGACGATCCTTT 59.482 57.895 0.00 0.00 0.00 3.11
1326 1406 3.082579 GCGCCCAGAGACGATCCTT 62.083 63.158 0.00 0.00 0.00 3.36
1327 1407 3.532155 GCGCCCAGAGACGATCCT 61.532 66.667 0.00 0.00 0.00 3.24
1328 1408 4.593864 GGCGCCCAGAGACGATCC 62.594 72.222 18.11 0.00 0.00 3.36
1329 1409 4.933064 CGGCGCCCAGAGACGATC 62.933 72.222 23.46 0.00 0.00 3.69
1357 1437 1.327764 GGAAAGCTGTTCTTATCCGCG 59.672 52.381 0.00 0.00 33.88 6.46
1358 1438 1.671328 GGGAAAGCTGTTCTTATCCGC 59.329 52.381 0.00 0.00 35.06 5.54
1360 1440 2.987232 ACGGGAAAGCTGTTCTTATCC 58.013 47.619 0.00 0.00 33.88 2.59
1371 1452 4.156008 ACTGAATTCACATTACGGGAAAGC 59.844 41.667 3.38 0.00 0.00 3.51
1400 1481 2.924290 GGAACGAAGAAGATGACGAAGG 59.076 50.000 0.00 0.00 0.00 3.46
1485 1566 2.091389 TGATCTGAGGAGGAGAGGAAGG 60.091 54.545 0.00 0.00 0.00 3.46
1487 1568 2.091389 CCTGATCTGAGGAGGAGAGGAA 60.091 54.545 0.38 0.00 34.69 3.36
1488 1569 1.498576 CCTGATCTGAGGAGGAGAGGA 59.501 57.143 0.38 0.00 34.69 3.71
1489 1570 1.999648 CCTGATCTGAGGAGGAGAGG 58.000 60.000 0.38 0.00 34.69 3.69
1517 1606 5.477291 AGTTCTGCTGCTTCTACTACTGTAA 59.523 40.000 0.00 0.00 0.00 2.41
1543 1632 5.107143 GCGCTTGCAGAAAATTAAATGGAAA 60.107 36.000 0.00 0.00 38.92 3.13
1545 1634 3.925913 GCGCTTGCAGAAAATTAAATGGA 59.074 39.130 0.00 0.00 38.92 3.41
1562 1651 4.586235 AACTGGTGGCCTGCGCTT 62.586 61.111 9.73 0.00 34.44 4.68
1713 1807 2.431942 AACAGTAACGCTCGCGGG 60.432 61.111 16.18 2.60 44.69 6.13
1752 1868 4.446413 CGTGGGAGTGGTACCGCC 62.446 72.222 21.89 14.97 33.76 6.13
1985 2105 1.140161 CCGCCGATACCGAGAACAA 59.860 57.895 0.00 0.00 38.22 2.83
1997 2117 1.064357 GCGAAAATTAAATCCCGCCGA 59.936 47.619 0.00 0.00 37.09 5.54
2032 2153 4.464069 AAAAACAGCAGCAACAACCTAA 57.536 36.364 0.00 0.00 0.00 2.69
2097 2218 6.484643 AGATGTCATCACGCATTTAATAGCTT 59.515 34.615 15.20 0.00 0.00 3.74
2098 2219 5.994054 AGATGTCATCACGCATTTAATAGCT 59.006 36.000 15.20 0.00 0.00 3.32
2111 2233 5.757320 CCCATACTCTTTCAGATGTCATCAC 59.243 44.000 15.20 0.00 0.00 3.06
2156 2278 4.026744 CTCCTAAACCATCCTCAGTCAGA 58.973 47.826 0.00 0.00 0.00 3.27
2157 2279 3.133721 CCTCCTAAACCATCCTCAGTCAG 59.866 52.174 0.00 0.00 0.00 3.51
2158 2280 3.107601 CCTCCTAAACCATCCTCAGTCA 58.892 50.000 0.00 0.00 0.00 3.41
2159 2281 3.375699 TCCTCCTAAACCATCCTCAGTC 58.624 50.000 0.00 0.00 0.00 3.51
2160 2282 3.491766 TCCTCCTAAACCATCCTCAGT 57.508 47.619 0.00 0.00 0.00 3.41
2161 2283 3.713764 ACATCCTCCTAAACCATCCTCAG 59.286 47.826 0.00 0.00 0.00 3.35
2162 2284 3.711704 GACATCCTCCTAAACCATCCTCA 59.288 47.826 0.00 0.00 0.00 3.86
2163 2285 3.711704 TGACATCCTCCTAAACCATCCTC 59.288 47.826 0.00 0.00 0.00 3.71
2164 2286 3.456277 GTGACATCCTCCTAAACCATCCT 59.544 47.826 0.00 0.00 0.00 3.24
2165 2287 3.433740 GGTGACATCCTCCTAAACCATCC 60.434 52.174 0.00 0.00 0.00 3.51
2166 2288 3.456277 AGGTGACATCCTCCTAAACCATC 59.544 47.826 0.00 0.00 37.02 3.51
2167 2289 3.200825 CAGGTGACATCCTCCTAAACCAT 59.799 47.826 0.00 0.00 36.67 3.55
2168 2290 2.571653 CAGGTGACATCCTCCTAAACCA 59.428 50.000 0.00 0.00 36.67 3.67
2180 2302 2.107726 CCCATCATCCATCAGGTGACAT 59.892 50.000 0.00 0.00 35.89 3.06
2183 2305 1.897473 ACCCATCATCCATCAGGTGA 58.103 50.000 0.00 0.00 35.89 4.02
2186 2308 3.395607 TCCTAAACCCATCATCCATCAGG 59.604 47.826 0.00 0.00 0.00 3.86
2195 2317 1.559682 GTCCTGCTCCTAAACCCATCA 59.440 52.381 0.00 0.00 0.00 3.07
2211 2333 2.293856 ACCCTCCATCAGGTATTGTCCT 60.294 50.000 0.00 0.00 41.51 3.85
2212 2334 2.127708 ACCCTCCATCAGGTATTGTCC 58.872 52.381 0.00 0.00 41.51 4.02
2216 2338 1.275002 ACCCACCCTCCATCAGGTATT 60.275 52.381 0.00 0.00 41.51 1.89
2218 2340 0.120377 AACCCACCCTCCATCAGGTA 59.880 55.000 0.00 0.00 41.51 3.08
2231 2353 2.355818 GGTGTCATCCTCCTAAACCCAC 60.356 54.545 0.00 0.00 0.00 4.61
2244 2366 2.224475 CCATCCTCCATCAGGTGTCATC 60.224 54.545 0.00 0.00 43.95 2.92
2278 2400 4.478317 TGGACCCATAATCCTTCAGATGTT 59.522 41.667 0.00 0.00 37.13 2.71
2282 2404 5.193527 TCAATTGGACCCATAATCCTTCAGA 59.806 40.000 5.42 0.00 37.13 3.27
2382 2504 3.182182 TCAGCATGAAAATCTCGACTCG 58.818 45.455 0.00 0.00 45.97 4.18
2401 2523 8.477256 AGAAACCTCATCATTTTCAAACTTTCA 58.523 29.630 0.00 0.00 32.62 2.69
2444 2566 5.698089 TGAAGTTCAGATAGCAGAAACTGTG 59.302 40.000 0.08 0.00 33.43 3.66
2445 2567 5.698545 GTGAAGTTCAGATAGCAGAAACTGT 59.301 40.000 5.62 0.00 33.43 3.55
2446 2568 5.121454 GGTGAAGTTCAGATAGCAGAAACTG 59.879 44.000 5.62 0.00 34.12 3.16
2447 2569 5.012561 AGGTGAAGTTCAGATAGCAGAAACT 59.987 40.000 5.62 0.00 0.00 2.66
2448 2570 5.241662 AGGTGAAGTTCAGATAGCAGAAAC 58.758 41.667 5.62 0.00 0.00 2.78
2449 2571 5.489792 AGGTGAAGTTCAGATAGCAGAAA 57.510 39.130 5.62 0.00 0.00 2.52
2450 2572 6.211584 ACTTAGGTGAAGTTCAGATAGCAGAA 59.788 38.462 5.62 0.00 46.79 3.02
2457 2579 9.442047 CAAAATCTACTTAGGTGAAGTTCAGAT 57.558 33.333 5.62 0.05 46.79 2.90
2501 2623 0.102300 ACGCAAACCAGGTTCTTTGC 59.898 50.000 15.15 15.15 45.83 3.68
2504 2626 1.164041 CGGACGCAAACCAGGTTCTT 61.164 55.000 4.93 0.00 0.00 2.52
2519 2641 3.377798 ACTCGGAAAATCTACTCTCGGAC 59.622 47.826 0.00 0.00 0.00 4.79
2520 2642 3.618351 ACTCGGAAAATCTACTCTCGGA 58.382 45.455 0.00 0.00 0.00 4.55
2559 2681 4.004314 TCACACTCACTCTGCTACTCTAC 58.996 47.826 0.00 0.00 0.00 2.59
2687 2813 6.929606 AGCCTTATTAGCTAGTATTTCGTTGG 59.070 38.462 0.00 0.00 39.29 3.77
2729 2858 5.890985 TGTGACCCCCATAATGAACTTATTG 59.109 40.000 0.00 0.00 0.00 1.90
2777 2906 1.452651 CCTACAGGCCCATGCTGTG 60.453 63.158 12.98 0.00 37.74 3.66
2883 3012 4.870363 ACTGTTTGGCAATGATGTTACAC 58.130 39.130 0.00 0.00 0.00 2.90
2918 3047 1.879575 AGATACAAGGGGCTAGTGCA 58.120 50.000 0.00 0.00 41.91 4.57
2944 3073 6.798427 ACTGACATGGACTGTATGAGTTAT 57.202 37.500 0.00 0.00 38.54 1.89
3018 3147 2.337849 ACCCATGCCACCAAAGATTTT 58.662 42.857 0.00 0.00 0.00 1.82
3019 3148 2.028561 ACCCATGCCACCAAAGATTT 57.971 45.000 0.00 0.00 0.00 2.17
3137 3266 6.998673 ACCAGGTCACCTTATATTTATTCAGC 59.001 38.462 0.00 0.00 0.00 4.26
3138 3267 7.445402 CCACCAGGTCACCTTATATTTATTCAG 59.555 40.741 0.00 0.00 0.00 3.02
3139 3268 7.128109 TCCACCAGGTCACCTTATATTTATTCA 59.872 37.037 0.00 0.00 35.89 2.57
3140 3269 7.444487 GTCCACCAGGTCACCTTATATTTATTC 59.556 40.741 0.00 0.00 35.89 1.75
3141 3270 7.128883 AGTCCACCAGGTCACCTTATATTTATT 59.871 37.037 0.00 0.00 35.89 1.40
3143 3272 5.968167 AGTCCACCAGGTCACCTTATATTTA 59.032 40.000 0.00 0.00 35.89 1.40
3185 3315 8.694540 CACTCTTATATTATGAGATGGAGGGAG 58.305 40.741 0.00 0.00 34.90 4.30
3186 3316 8.180165 ACACTCTTATATTATGAGATGGAGGGA 58.820 37.037 0.00 0.00 34.90 4.20
3187 3317 8.372877 ACACTCTTATATTATGAGATGGAGGG 57.627 38.462 0.00 0.00 34.90 4.30
3209 3339 4.155280 ACACCAGTGTAGTGTCAAAAACAC 59.845 41.667 0.54 0.07 45.13 3.32
3210 3340 4.328536 ACACCAGTGTAGTGTCAAAAACA 58.671 39.130 0.54 0.00 45.13 2.83
3211 3341 4.957759 ACACCAGTGTAGTGTCAAAAAC 57.042 40.909 0.54 0.00 45.13 2.43
3219 3349 2.794910 CGTTTCTGACACCAGTGTAGTG 59.205 50.000 2.85 0.00 45.05 2.74
3220 3350 2.802057 GCGTTTCTGACACCAGTGTAGT 60.802 50.000 2.85 0.00 45.05 2.73
3221 3351 1.792949 GCGTTTCTGACACCAGTGTAG 59.207 52.381 2.85 2.80 45.05 2.74
3222 3352 1.411246 AGCGTTTCTGACACCAGTGTA 59.589 47.619 2.85 0.00 45.05 2.90
3223 3353 5.553052 AAGAGCGTTTCTGACACCAGTGT 62.553 47.826 2.40 2.40 40.21 3.55
3224 3354 0.861837 GAGCGTTTCTGACACCAGTG 59.138 55.000 0.00 0.00 41.16 3.66
3225 3355 0.753262 AGAGCGTTTCTGACACCAGT 59.247 50.000 0.00 0.00 41.16 4.00
3226 3356 1.871080 AAGAGCGTTTCTGACACCAG 58.129 50.000 0.00 0.00 41.74 4.00
3227 3357 3.678056 ATAAGAGCGTTTCTGACACCA 57.322 42.857 0.00 0.00 35.91 4.17
3228 3358 7.095607 CCATAATATAAGAGCGTTTCTGACACC 60.096 40.741 0.00 0.00 35.91 4.16
3229 3359 7.095607 CCCATAATATAAGAGCGTTTCTGACAC 60.096 40.741 0.00 0.00 35.91 3.67
3230 3360 6.929049 CCCATAATATAAGAGCGTTTCTGACA 59.071 38.462 0.00 0.00 35.91 3.58
3231 3361 7.152645 TCCCATAATATAAGAGCGTTTCTGAC 58.847 38.462 0.00 0.00 35.91 3.51
3232 3362 7.297936 TCCCATAATATAAGAGCGTTTCTGA 57.702 36.000 0.00 0.00 35.91 3.27
3233 3363 7.065085 CCATCCCATAATATAAGAGCGTTTCTG 59.935 40.741 0.00 0.00 35.91 3.02
3234 3364 7.038302 TCCATCCCATAATATAAGAGCGTTTCT 60.038 37.037 0.00 0.00 37.93 2.52
3235 3365 7.103641 TCCATCCCATAATATAAGAGCGTTTC 58.896 38.462 0.00 0.00 0.00 2.78
3236 3366 7.016153 TCCATCCCATAATATAAGAGCGTTT 57.984 36.000 0.00 0.00 0.00 3.60
3237 3367 6.352222 CCTCCATCCCATAATATAAGAGCGTT 60.352 42.308 0.00 0.00 0.00 4.84
3238 3368 5.129485 CCTCCATCCCATAATATAAGAGCGT 59.871 44.000 0.00 0.00 0.00 5.07
3239 3369 5.453903 CCCTCCATCCCATAATATAAGAGCG 60.454 48.000 0.00 0.00 0.00 5.03
3240 3370 5.667626 TCCCTCCATCCCATAATATAAGAGC 59.332 44.000 0.00 0.00 0.00 4.09
3241 3371 6.905776 ACTCCCTCCATCCCATAATATAAGAG 59.094 42.308 0.00 0.00 0.00 2.85
3242 3372 6.826727 ACTCCCTCCATCCCATAATATAAGA 58.173 40.000 0.00 0.00 0.00 2.10
3243 3373 7.071321 GGTACTCCCTCCATCCCATAATATAAG 59.929 44.444 0.00 0.00 0.00 1.73
3244 3374 6.906901 GGTACTCCCTCCATCCCATAATATAA 59.093 42.308 0.00 0.00 0.00 0.98
3245 3375 6.223994 AGGTACTCCCTCCATCCCATAATATA 59.776 42.308 0.00 0.00 40.71 0.86
3246 3376 5.018962 AGGTACTCCCTCCATCCCATAATAT 59.981 44.000 0.00 0.00 40.71 1.28
3247 3377 4.363217 AGGTACTCCCTCCATCCCATAATA 59.637 45.833 0.00 0.00 40.71 0.98
3248 3378 3.146833 AGGTACTCCCTCCATCCCATAAT 59.853 47.826 0.00 0.00 40.71 1.28
3249 3379 2.527057 AGGTACTCCCTCCATCCCATAA 59.473 50.000 0.00 0.00 40.71 1.90
3250 3380 2.161624 AGGTACTCCCTCCATCCCATA 58.838 52.381 0.00 0.00 40.71 2.74
3251 3381 0.952659 AGGTACTCCCTCCATCCCAT 59.047 55.000 0.00 0.00 40.71 4.00
3252 3382 0.722676 AAGGTACTCCCTCCATCCCA 59.277 55.000 0.00 0.00 45.47 4.37
3253 3383 1.894699 AAAGGTACTCCCTCCATCCC 58.105 55.000 0.00 0.00 45.47 3.85
3254 3384 3.523972 AGAAAAAGGTACTCCCTCCATCC 59.476 47.826 0.00 0.00 45.47 3.51
3255 3385 4.846168 AGAAAAAGGTACTCCCTCCATC 57.154 45.455 0.00 0.00 45.47 3.51
3256 3386 6.030082 TCTAAGAAAAAGGTACTCCCTCCAT 58.970 40.000 0.00 0.00 45.47 3.41
3257 3387 5.408824 TCTAAGAAAAAGGTACTCCCTCCA 58.591 41.667 0.00 0.00 45.47 3.86
3258 3388 6.013553 ACTTCTAAGAAAAAGGTACTCCCTCC 60.014 42.308 0.00 0.00 45.47 4.30
3259 3389 7.006865 ACTTCTAAGAAAAAGGTACTCCCTC 57.993 40.000 0.00 0.00 45.47 4.30
3261 3391 6.766429 TGACTTCTAAGAAAAAGGTACTCCC 58.234 40.000 0.00 0.00 38.49 4.30
3262 3392 9.368674 GTATGACTTCTAAGAAAAAGGTACTCC 57.631 37.037 0.00 0.00 38.49 3.85
3263 3393 9.074443 CGTATGACTTCTAAGAAAAAGGTACTC 57.926 37.037 0.00 0.00 38.49 2.59
3265 3395 8.754230 ACGTATGACTTCTAAGAAAAAGGTAC 57.246 34.615 0.00 0.00 0.00 3.34
3295 3425 3.194968 AGGAGTGTAACAAGGTCCATACG 59.805 47.826 0.00 0.00 41.43 3.06
3300 3430 7.287235 AGTGTATATAGGAGTGTAACAAGGTCC 59.713 40.741 0.00 0.00 41.43 4.46
3341 3472 1.602377 GTTGCAACTCTTAACGCCTGT 59.398 47.619 22.36 0.00 0.00 4.00
3379 3510 7.278424 ACAAAAAGGTCATGACATCAAAACTTG 59.722 33.333 26.47 17.85 0.00 3.16
3380 3511 7.330262 ACAAAAAGGTCATGACATCAAAACTT 58.670 30.769 26.47 15.24 0.00 2.66
3461 3592 7.319646 ACTTTTGTCTTGTTCAATTTGCAGTA 58.680 30.769 0.00 0.00 0.00 2.74
3463 3594 6.651755 ACTTTTGTCTTGTTCAATTTGCAG 57.348 33.333 0.00 0.00 0.00 4.41
3471 3606 5.848406 ACAACCAAACTTTTGTCTTGTTCA 58.152 33.333 8.29 0.00 35.40 3.18
3506 3641 4.275936 GCATGGAATCACTATTTAACGGCT 59.724 41.667 0.00 0.00 0.00 5.52
3509 3644 5.333339 CCGAGCATGGAATCACTATTTAACG 60.333 44.000 0.00 0.00 0.00 3.18
3581 3719 4.992951 TGCATTGCTACAGTATGCTATGAG 59.007 41.667 20.08 5.67 43.80 2.90
3649 3787 8.654230 TGGTAAATACTAGTCGTGTACTCTAG 57.346 38.462 0.00 4.31 39.80 2.43
3650 3788 9.618890 AATGGTAAATACTAGTCGTGTACTCTA 57.381 33.333 0.00 0.00 39.80 2.43
3651 3789 8.404000 CAATGGTAAATACTAGTCGTGTACTCT 58.596 37.037 0.00 0.00 39.80 3.24
3652 3790 7.167136 GCAATGGTAAATACTAGTCGTGTACTC 59.833 40.741 0.00 0.00 39.80 2.59
3653 3791 6.976925 GCAATGGTAAATACTAGTCGTGTACT 59.023 38.462 0.00 0.00 42.62 2.73
3654 3792 6.753279 TGCAATGGTAAATACTAGTCGTGTAC 59.247 38.462 0.00 0.00 0.00 2.90
3655 3793 6.865411 TGCAATGGTAAATACTAGTCGTGTA 58.135 36.000 0.00 0.00 0.00 2.90
3656 3794 5.726397 TGCAATGGTAAATACTAGTCGTGT 58.274 37.500 0.00 0.00 0.00 4.49
3657 3795 6.456449 GGTTGCAATGGTAAATACTAGTCGTG 60.456 42.308 0.59 0.00 0.00 4.35
3658 3796 5.583457 GGTTGCAATGGTAAATACTAGTCGT 59.417 40.000 0.59 0.00 0.00 4.34
3659 3797 5.007332 GGGTTGCAATGGTAAATACTAGTCG 59.993 44.000 0.59 0.00 0.00 4.18
3660 3798 5.007332 CGGGTTGCAATGGTAAATACTAGTC 59.993 44.000 0.59 0.00 0.00 2.59
3661 3799 4.879545 CGGGTTGCAATGGTAAATACTAGT 59.120 41.667 0.59 0.00 0.00 2.57
3780 3922 5.180680 CAGCAATACCCATGTATGTGATGAG 59.819 44.000 0.00 0.00 37.73 2.90
4247 4389 5.411781 CCAGTGAGGTACAGATACTTGTTC 58.588 45.833 0.00 0.00 32.56 3.18
4365 4507 5.541868 TCAAAAAGATGGGCAGTAAAATGGA 59.458 36.000 0.00 0.00 0.00 3.41
4404 4546 4.301072 AGGGTAGAAGCATTAACAAGCA 57.699 40.909 0.00 0.00 0.00 3.91
4405 4547 4.575236 GGTAGGGTAGAAGCATTAACAAGC 59.425 45.833 0.00 0.00 0.00 4.01
4406 4548 5.123936 GGGTAGGGTAGAAGCATTAACAAG 58.876 45.833 0.00 0.00 0.00 3.16
4408 4550 4.105577 TGGGTAGGGTAGAAGCATTAACA 58.894 43.478 0.00 0.00 0.00 2.41
4409 4551 4.765813 TGGGTAGGGTAGAAGCATTAAC 57.234 45.455 0.00 0.00 0.00 2.01
4411 4553 4.827789 AGATGGGTAGGGTAGAAGCATTA 58.172 43.478 0.00 0.00 0.00 1.90
4412 4554 3.669949 AGATGGGTAGGGTAGAAGCATT 58.330 45.455 0.00 0.00 0.00 3.56
4417 4559 4.892198 AGCTAAAGATGGGTAGGGTAGAA 58.108 43.478 0.00 0.00 0.00 2.10
4424 4566 3.244249 GCCACCTAGCTAAAGATGGGTAG 60.244 52.174 2.76 0.00 43.58 3.18
4432 4574 4.960938 TCATACATGCCACCTAGCTAAAG 58.039 43.478 0.00 0.00 0.00 1.85
4452 4594 5.771153 TTTCATGAGAGCAACATGTTTCA 57.229 34.783 8.77 10.68 43.56 2.69
4466 4612 8.558973 AGGTACTCTCAAAAGAATTTCATGAG 57.441 34.615 15.29 15.29 37.28 2.90
4487 4633 6.620877 ACATGATTTACTGTCTTGGAGGTA 57.379 37.500 0.00 0.00 0.00 3.08
4543 4690 8.863086 TCAATTGGAAGATGTCTCAAATTTTCT 58.137 29.630 5.42 0.00 0.00 2.52
4576 4723 0.178990 AGTTCAAGGTGGTCCAAGGC 60.179 55.000 0.00 0.00 35.89 4.35
4578 4725 5.301805 ACAAAATAGTTCAAGGTGGTCCAAG 59.698 40.000 0.00 0.00 35.89 3.61
4581 4728 5.769367 GAACAAAATAGTTCAAGGTGGTCC 58.231 41.667 0.00 0.00 45.53 4.46
4596 4748 4.039004 TGCAGTAGCCAACATGAACAAAAT 59.961 37.500 0.00 0.00 41.13 1.82
4604 4756 1.736126 CTCTGTGCAGTAGCCAACATG 59.264 52.381 0.00 0.00 41.13 3.21
4623 4775 9.998106 ACATAAGTCAGTTTTACATACAGAACT 57.002 29.630 0.00 0.00 32.89 3.01
4644 4977 8.465999 TGAAAAGAGAACAGCAAAGAAACATAA 58.534 29.630 0.00 0.00 0.00 1.90
4648 4981 5.745769 CCTGAAAAGAGAACAGCAAAGAAAC 59.254 40.000 0.00 0.00 0.00 2.78
4649 4982 5.652014 TCCTGAAAAGAGAACAGCAAAGAAA 59.348 36.000 0.00 0.00 0.00 2.52
4701 5034 1.501582 AGGAGGTGTAGATGAAGCCC 58.498 55.000 0.00 0.00 0.00 5.19
4734 5067 3.075882 TGTTTCCATGGGAGATGAAGGTT 59.924 43.478 13.02 0.00 31.21 3.50
4746 5079 3.039202 GCGAGCGGTGTTTCCATGG 62.039 63.158 4.97 4.97 35.57 3.66
4860 5193 4.335037 GGATCAATCTCAAACAGCTTCTCC 59.665 45.833 0.00 0.00 0.00 3.71
4884 5217 3.364441 GCAAGCACGGTGCCATCA 61.364 61.111 28.14 0.00 46.52 3.07
4932 5265 1.380785 CATCAGGTGGGCTGGCATT 60.381 57.895 2.88 0.00 0.00 3.56
4938 5271 1.617804 CCATCAAACATCAGGTGGGCT 60.618 52.381 0.00 0.00 0.00 5.19
4953 5286 1.900351 CTTCTCGTCCTGCCCATCA 59.100 57.895 0.00 0.00 0.00 3.07
5013 5346 1.597797 CGTAGTCCCTGGCGGTGTAA 61.598 60.000 0.00 0.00 0.00 2.41
5073 5406 1.072505 GGAAAGGCCGGTCAGTTCA 59.927 57.895 20.21 0.00 0.00 3.18
5100 5433 1.377333 GTAGTCCTGGGCCTTGTGC 60.377 63.158 4.53 0.00 40.16 4.57
5151 5484 2.363147 GACTGGGCCCTCTCGTCT 60.363 66.667 25.70 0.00 0.00 4.18
5214 5547 1.489481 CTCACATCTGCACCTCCCTA 58.511 55.000 0.00 0.00 0.00 3.53
5375 5721 5.071250 ACACACCTGAACTATGTAAGGAACA 59.929 40.000 0.00 0.00 43.86 3.18
5384 5730 5.758296 ACTAACAACACACACCTGAACTATG 59.242 40.000 0.00 0.00 0.00 2.23
5386 5732 5.347620 ACTAACAACACACACCTGAACTA 57.652 39.130 0.00 0.00 0.00 2.24
5387 5733 4.216411 ACTAACAACACACACCTGAACT 57.784 40.909 0.00 0.00 0.00 3.01
5389 5735 4.093703 CGAAACTAACAACACACACCTGAA 59.906 41.667 0.00 0.00 0.00 3.02
5391 5737 3.372822 ACGAAACTAACAACACACACCTG 59.627 43.478 0.00 0.00 0.00 4.00
5392 5738 3.372822 CACGAAACTAACAACACACACCT 59.627 43.478 0.00 0.00 0.00 4.00
5522 5886 3.394674 TCTAACACGGCAGATGACAAA 57.605 42.857 0.00 0.00 0.00 2.83
5651 6038 0.614979 ATACGGAGACACCACTGGCT 60.615 55.000 0.00 0.00 39.15 4.75
5663 6050 4.687948 CCACAGATTTATGCAGATACGGAG 59.312 45.833 0.00 0.00 0.00 4.63
5682 6069 3.929955 TCATGATGGATAGCAACCACA 57.070 42.857 0.00 0.00 40.36 4.17
5685 6072 3.057736 GCACATCATGATGGATAGCAACC 60.058 47.826 33.31 11.22 42.91 3.77
5692 6079 3.697619 ATCGAGCACATCATGATGGAT 57.302 42.857 33.31 23.52 42.91 3.41
5696 6083 2.847441 AGCAATCGAGCACATCATGAT 58.153 42.857 1.18 1.18 36.85 2.45
5704 6091 0.917259 CAGACGTAGCAATCGAGCAC 59.083 55.000 0.00 0.00 36.85 4.40
5717 6104 2.063015 TTTGGCCACATCCCAGACGT 62.063 55.000 3.88 0.00 33.13 4.34
5718 6105 0.680921 ATTTGGCCACATCCCAGACG 60.681 55.000 3.88 0.00 33.13 4.18
5745 6132 6.019640 CACTTTCTTTGAAATGCACAAACGAT 60.020 34.615 0.00 0.00 34.30 3.73
5751 6138 5.748152 GCTAACACTTTCTTTGAAATGCACA 59.252 36.000 0.00 0.00 0.00 4.57
5795 6182 1.244816 TATCAGACCCGTCTATGCCG 58.755 55.000 0.00 0.00 37.98 5.69
5798 6185 5.874895 TTCGTATATCAGACCCGTCTATG 57.125 43.478 0.00 0.00 37.98 2.23
5800 6187 5.335426 GCATTTCGTATATCAGACCCGTCTA 60.335 44.000 0.00 0.00 37.98 2.59
5807 6194 5.403766 CACCTGAGCATTTCGTATATCAGAC 59.596 44.000 1.72 0.00 37.03 3.51
5809 6196 4.151335 GCACCTGAGCATTTCGTATATCAG 59.849 45.833 0.00 0.00 35.14 2.90
5835 6222 2.100797 CGATGCCAACATGCACGG 59.899 61.111 0.00 0.00 45.48 4.94
5986 6422 6.391227 AAACAGACATTTTCAGAATCCGTT 57.609 33.333 0.00 0.00 0.00 4.44
6003 6439 6.096423 AGCGCCGATATAATATCCTAAACAGA 59.904 38.462 2.29 0.00 0.00 3.41
6005 6441 6.040247 CAGCGCCGATATAATATCCTAAACA 58.960 40.000 2.29 0.00 0.00 2.83
6008 6444 6.650427 ATCAGCGCCGATATAATATCCTAA 57.350 37.500 3.79 0.00 0.00 2.69
6009 6445 6.150641 GGTATCAGCGCCGATATAATATCCTA 59.849 42.308 15.99 0.00 30.79 2.94
6010 6446 5.047943 GGTATCAGCGCCGATATAATATCCT 60.048 44.000 15.99 0.00 30.79 3.24
6023 6459 1.299468 CTGACTCGGTATCAGCGCC 60.299 63.158 2.29 0.00 39.21 6.53
6024 6460 0.312416 ATCTGACTCGGTATCAGCGC 59.688 55.000 0.00 0.00 42.84 5.92
6052 6491 0.249868 GCAGGCTTTTGGTTTGTCCC 60.250 55.000 0.00 0.00 34.77 4.46
6055 6494 2.563702 CATTGCAGGCTTTTGGTTTGT 58.436 42.857 0.00 0.00 0.00 2.83
6066 6505 0.533491 TCAGGATTTGCATTGCAGGC 59.467 50.000 11.76 5.56 40.61 4.85
6069 6508 4.500127 CTCATTTCAGGATTTGCATTGCA 58.500 39.130 7.38 7.38 36.47 4.08
6070 6509 3.308866 GCTCATTTCAGGATTTGCATTGC 59.691 43.478 0.46 0.46 0.00 3.56
6071 6510 4.500127 TGCTCATTTCAGGATTTGCATTG 58.500 39.130 0.00 0.00 0.00 2.82
6072 6511 4.811969 TGCTCATTTCAGGATTTGCATT 57.188 36.364 0.00 0.00 0.00 3.56
6073 6512 4.811969 TTGCTCATTTCAGGATTTGCAT 57.188 36.364 0.00 0.00 0.00 3.96
6083 6522 8.642148 TGGCACAATGGAAATTGCTCATTTCA 62.642 38.462 18.15 9.02 44.03 2.69
6123 6562 6.174720 TCTCCTCACAGTTGTTTTCACTAT 57.825 37.500 0.00 0.00 0.00 2.12
6124 6563 5.453339 CCTCTCCTCACAGTTGTTTTCACTA 60.453 44.000 0.00 0.00 0.00 2.74
6136 6575 0.324183 TGGCTCTCCTCTCCTCACAG 60.324 60.000 0.00 0.00 0.00 3.66
6137 6576 0.337773 ATGGCTCTCCTCTCCTCACA 59.662 55.000 0.00 0.00 0.00 3.58
6138 6577 1.039856 GATGGCTCTCCTCTCCTCAC 58.960 60.000 0.00 0.00 0.00 3.51
6139 6578 0.633378 TGATGGCTCTCCTCTCCTCA 59.367 55.000 0.00 0.00 0.00 3.86
6140 6579 1.895131 GATGATGGCTCTCCTCTCCTC 59.105 57.143 0.00 0.00 0.00 3.71
6141 6580 1.482930 GGATGATGGCTCTCCTCTCCT 60.483 57.143 0.00 0.00 0.00 3.69
6142 6581 0.975887 GGATGATGGCTCTCCTCTCC 59.024 60.000 0.00 0.00 0.00 3.71
6409 6851 1.000283 ACTGAGCTGAACAGAACGGAG 60.000 52.381 7.84 0.00 38.55 4.63
6419 6861 4.100653 AGCAATCTAGCATACTGAGCTGAA 59.899 41.667 0.00 0.00 43.33 3.02
6425 6867 4.686972 GTGTCAGCAATCTAGCATACTGA 58.313 43.478 0.00 0.00 36.85 3.41
6463 6908 3.161450 GGACTGAGGCCCGGCATA 61.161 66.667 12.58 0.00 0.00 3.14
6490 6935 2.766263 ACTGGTGCCGATTCAGATAGAA 59.234 45.455 0.00 0.00 41.28 2.10
6498 6943 2.700773 GGCCAACTGGTGCCGATTC 61.701 63.158 0.00 0.00 38.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.