Multiple sequence alignment - TraesCS3D01G420000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G420000 chr3D 100.000 2645 0 0 1 2645 532240479 532237835 0.000000e+00 4885.0
1 TraesCS3D01G420000 chr3D 87.886 421 36 7 2028 2438 532191882 532191467 5.120000e-132 481.0
2 TraesCS3D01G420000 chr3D 78.824 170 30 3 79 244 566297176 566297343 2.780000e-20 110.0
3 TraesCS3D01G420000 chr3A 92.031 1669 71 23 510 2159 667506215 667504590 0.000000e+00 2289.0
4 TraesCS3D01G420000 chr3A 97.536 487 10 1 2160 2644 667504619 667504133 0.000000e+00 832.0
5 TraesCS3D01G420000 chr3A 84.615 260 34 4 2178 2432 667486835 667486577 1.220000e-63 254.0
6 TraesCS3D01G420000 chr3A 81.853 259 33 10 16 265 71064306 71064053 3.450000e-49 206.0
7 TraesCS3D01G420000 chr3B 87.344 1359 73 33 601 1903 704573823 704572508 0.000000e+00 1465.0
8 TraesCS3D01G420000 chr3B 92.308 143 11 0 333 475 556858340 556858198 1.240000e-48 204.0
9 TraesCS3D01G420000 chr3B 77.889 199 24 15 130 313 535542489 535542296 3.600000e-19 106.0
10 TraesCS3D01G420000 chr3B 93.617 47 3 0 2588 2634 704568301 704568255 1.310000e-08 71.3
11 TraesCS3D01G420000 chr5A 83.003 353 39 16 599 943 34524168 34524507 1.540000e-77 300.0
12 TraesCS3D01G420000 chr5A 95.652 46 2 0 268 313 522107077 522107122 1.020000e-09 75.0
13 TraesCS3D01G420000 chr1A 82.961 358 36 13 594 943 516645059 516644719 1.540000e-77 300.0
14 TraesCS3D01G420000 chr1A 95.652 138 5 1 343 479 3261588 3261725 1.230000e-53 220.0
15 TraesCS3D01G420000 chr1A 92.517 147 8 3 327 473 486045916 486045773 9.600000e-50 207.0
16 TraesCS3D01G420000 chr1A 83.333 144 23 1 124 266 309765092 309764949 5.940000e-27 132.0
17 TraesCS3D01G420000 chr1A 81.379 145 22 5 124 266 547576306 547576447 2.150000e-21 113.0
18 TraesCS3D01G420000 chr2D 82.528 269 39 7 1 263 625224178 625223912 2.050000e-56 230.0
19 TraesCS3D01G420000 chr2D 80.159 252 27 8 3 252 509760087 509759857 1.630000e-37 167.0
20 TraesCS3D01G420000 chr7B 93.960 149 9 0 344 492 332242891 332242743 2.650000e-55 226.0
21 TraesCS3D01G420000 chr7B 82.222 270 37 8 1 267 200893200 200893461 3.430000e-54 222.0
22 TraesCS3D01G420000 chr7B 94.406 143 5 2 336 475 401540677 401540535 1.590000e-52 217.0
23 TraesCS3D01G420000 chr7B 91.837 147 9 3 327 473 85814051 85813908 4.460000e-48 202.0
24 TraesCS3D01G420000 chr7B 90.909 143 13 0 331 473 152464755 152464897 2.690000e-45 193.0
25 TraesCS3D01G420000 chr7B 84.270 178 24 4 324 499 607777530 607777705 1.260000e-38 171.0
26 TraesCS3D01G420000 chr7B 76.265 257 41 9 1 256 187571533 187571770 4.620000e-23 119.0
27 TraesCS3D01G420000 chr4A 97.015 134 4 0 345 478 730340884 730341017 2.650000e-55 226.0
28 TraesCS3D01G420000 chr4D 96.992 133 3 1 347 478 62464001 62463869 3.430000e-54 222.0
29 TraesCS3D01G420000 chr5D 94.406 143 6 2 341 482 480344163 480344304 4.430000e-53 219.0
30 TraesCS3D01G420000 chr6B 96.212 132 5 0 345 476 81012015 81012146 1.590000e-52 217.0
31 TraesCS3D01G420000 chr4B 96.212 132 5 0 342 473 566413838 566413969 1.590000e-52 217.0
32 TraesCS3D01G420000 chr4B 89.286 56 6 0 261 316 12621237 12621182 1.310000e-08 71.3
33 TraesCS3D01G420000 chr2B 89.634 164 13 4 332 492 578606519 578606357 3.450000e-49 206.0
34 TraesCS3D01G420000 chr2B 90.066 151 12 3 320 470 793417136 793417283 2.690000e-45 193.0
35 TraesCS3D01G420000 chr7A 91.429 140 9 3 334 473 19936832 19936696 3.480000e-44 189.0
36 TraesCS3D01G420000 chr7A 89.796 147 12 3 330 473 166489289 166489435 4.500000e-43 185.0
37 TraesCS3D01G420000 chr7A 84.615 130 17 3 137 265 672854323 672854450 2.760000e-25 126.0
38 TraesCS3D01G420000 chr6A 85.556 180 24 2 316 494 346345596 346345418 1.250000e-43 187.0
39 TraesCS3D01G420000 chr6A 86.441 118 12 4 127 243 22677521 22677635 2.760000e-25 126.0
40 TraesCS3D01G420000 chrUn 77.907 258 51 6 2 256 109031422 109031168 3.530000e-34 156.0
41 TraesCS3D01G420000 chr1D 91.089 101 9 0 164 264 305220032 305220132 1.280000e-28 137.0
42 TraesCS3D01G420000 chr7D 81.818 132 17 4 1 128 406911884 406911756 1.300000e-18 104.0
43 TraesCS3D01G420000 chr1B 90.741 54 3 1 261 314 6493556 6493607 1.310000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G420000 chr3D 532237835 532240479 2644 True 4885.0 4885 100.0000 1 2645 1 chr3D.!!$R2 2644
1 TraesCS3D01G420000 chr3A 667504133 667506215 2082 True 1560.5 2289 94.7835 510 2644 2 chr3A.!!$R3 2134
2 TraesCS3D01G420000 chr3B 704572508 704573823 1315 True 1465.0 1465 87.3440 601 1903 1 chr3B.!!$R4 1302

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
64 65 0.03309 AAAGGAAGTGGACGACGGTC 59.967 55.0 0.0 0.0 42.66 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2060 2135 0.237498 GCCGCTGCGTAGTTCTTTTT 59.763 50.0 21.59 0.0 0.0 1.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.143876 TCATGGAGACGACAGATGGA 57.856 50.000 0.00 0.00 0.00 3.41
20 21 2.027385 TCATGGAGACGACAGATGGAG 58.973 52.381 0.00 0.00 0.00 3.86
21 22 1.068281 CATGGAGACGACAGATGGAGG 59.932 57.143 0.00 0.00 0.00 4.30
22 23 0.331616 TGGAGACGACAGATGGAGGA 59.668 55.000 0.00 0.00 0.00 3.71
23 24 0.741915 GGAGACGACAGATGGAGGAC 59.258 60.000 0.00 0.00 0.00 3.85
24 25 0.741915 GAGACGACAGATGGAGGACC 59.258 60.000 0.00 0.00 0.00 4.46
25 26 0.333312 AGACGACAGATGGAGGACCT 59.667 55.000 0.00 0.00 37.04 3.85
26 27 0.457851 GACGACAGATGGAGGACCTG 59.542 60.000 0.00 0.00 37.04 4.00
27 28 0.972983 ACGACAGATGGAGGACCTGG 60.973 60.000 0.00 0.00 37.04 4.45
28 29 0.972983 CGACAGATGGAGGACCTGGT 60.973 60.000 0.00 0.00 37.04 4.00
29 30 1.280457 GACAGATGGAGGACCTGGTT 58.720 55.000 0.00 0.00 37.04 3.67
30 31 0.987294 ACAGATGGAGGACCTGGTTG 59.013 55.000 0.00 0.00 37.04 3.77
31 32 0.393537 CAGATGGAGGACCTGGTTGC 60.394 60.000 0.00 0.00 37.04 4.17
32 33 1.077429 GATGGAGGACCTGGTTGCC 60.077 63.158 0.00 3.68 37.04 4.52
33 34 2.876368 GATGGAGGACCTGGTTGCCG 62.876 65.000 0.00 0.00 37.04 5.69
34 35 3.319198 GGAGGACCTGGTTGCCGA 61.319 66.667 0.00 0.00 0.00 5.54
35 36 2.747686 GAGGACCTGGTTGCCGAA 59.252 61.111 0.00 0.00 0.00 4.30
36 37 1.376037 GAGGACCTGGTTGCCGAAG 60.376 63.158 0.00 0.00 0.00 3.79
37 38 3.056328 GGACCTGGTTGCCGAAGC 61.056 66.667 0.00 0.00 40.48 3.86
38 39 3.423154 GACCTGGTTGCCGAAGCG 61.423 66.667 0.00 0.00 44.31 4.68
54 55 5.330271 CGAAGCGGAATATAAAGGAAGTG 57.670 43.478 0.00 0.00 0.00 3.16
55 56 4.211374 CGAAGCGGAATATAAAGGAAGTGG 59.789 45.833 0.00 0.00 0.00 4.00
56 57 5.365619 GAAGCGGAATATAAAGGAAGTGGA 58.634 41.667 0.00 0.00 0.00 4.02
57 58 4.704965 AGCGGAATATAAAGGAAGTGGAC 58.295 43.478 0.00 0.00 0.00 4.02
58 59 3.493503 GCGGAATATAAAGGAAGTGGACG 59.506 47.826 0.00 0.00 0.00 4.79
59 60 4.738541 GCGGAATATAAAGGAAGTGGACGA 60.739 45.833 0.00 0.00 0.00 4.20
60 61 4.743644 CGGAATATAAAGGAAGTGGACGAC 59.256 45.833 0.00 0.00 0.00 4.34
61 62 4.743644 GGAATATAAAGGAAGTGGACGACG 59.256 45.833 0.00 0.00 0.00 5.12
62 63 2.667473 ATAAAGGAAGTGGACGACGG 57.333 50.000 0.00 0.00 0.00 4.79
63 64 1.331214 TAAAGGAAGTGGACGACGGT 58.669 50.000 0.00 0.00 0.00 4.83
64 65 0.033090 AAAGGAAGTGGACGACGGTC 59.967 55.000 0.00 0.00 42.66 4.79
65 66 1.111116 AAGGAAGTGGACGACGGTCA 61.111 55.000 9.10 0.00 45.28 4.02
66 67 1.372623 GGAAGTGGACGACGGTCAC 60.373 63.158 9.10 12.79 45.28 3.67
67 68 1.372623 GAAGTGGACGACGGTCACC 60.373 63.158 15.77 11.07 45.28 4.02
68 69 2.760387 GAAGTGGACGACGGTCACCC 62.760 65.000 15.77 8.69 45.28 4.61
69 70 4.368543 GTGGACGACGGTCACCCC 62.369 72.222 9.10 6.26 45.28 4.95
89 90 1.271656 CGTAGGATAGGTTTAGGGCCG 59.728 57.143 0.00 0.00 0.00 6.13
90 91 1.622312 GTAGGATAGGTTTAGGGCCGG 59.378 57.143 0.00 0.00 0.00 6.13
91 92 0.767060 AGGATAGGTTTAGGGCCGGG 60.767 60.000 2.18 0.00 0.00 5.73
92 93 1.058428 GGATAGGTTTAGGGCCGGGT 61.058 60.000 2.18 0.00 0.00 5.28
93 94 0.395686 GATAGGTTTAGGGCCGGGTC 59.604 60.000 2.18 0.00 0.00 4.46
94 95 1.405272 ATAGGTTTAGGGCCGGGTCG 61.405 60.000 2.18 0.00 0.00 4.79
96 97 4.091939 GTTTAGGGCCGGGTCGCT 62.092 66.667 2.18 3.42 0.00 4.93
97 98 3.324108 TTTAGGGCCGGGTCGCTT 61.324 61.111 2.18 0.00 0.00 4.68
98 99 2.897762 TTTAGGGCCGGGTCGCTTT 61.898 57.895 2.18 0.00 0.00 3.51
99 100 2.414658 TTTAGGGCCGGGTCGCTTTT 62.415 55.000 2.18 0.00 0.00 2.27
100 101 2.414658 TTAGGGCCGGGTCGCTTTTT 62.415 55.000 2.18 0.00 0.00 1.94
125 126 9.619316 TTTGTCCTAAATGTTCGAAATGTAATG 57.381 29.630 0.00 0.00 0.00 1.90
126 127 8.554835 TGTCCTAAATGTTCGAAATGTAATGA 57.445 30.769 0.00 0.00 0.00 2.57
127 128 9.004717 TGTCCTAAATGTTCGAAATGTAATGAA 57.995 29.630 0.00 0.00 0.00 2.57
128 129 9.834628 GTCCTAAATGTTCGAAATGTAATGAAA 57.165 29.630 0.00 0.00 0.00 2.69
136 137 9.521503 TGTTCGAAATGTAATGAAAATGTTCAA 57.478 25.926 1.55 0.00 46.66 2.69
158 159 7.650834 CAAAATGTAATGAATTTTGTCCGGT 57.349 32.000 0.00 0.00 44.44 5.28
159 160 8.082334 CAAAATGTAATGAATTTTGTCCGGTT 57.918 30.769 0.00 0.00 44.44 4.44
160 161 8.555361 CAAAATGTAATGAATTTTGTCCGGTTT 58.445 29.630 0.00 0.00 44.44 3.27
161 162 9.765795 AAAATGTAATGAATTTTGTCCGGTTTA 57.234 25.926 0.00 0.00 36.21 2.01
162 163 9.936759 AAATGTAATGAATTTTGTCCGGTTTAT 57.063 25.926 0.00 0.00 0.00 1.40
173 174 9.801873 ATTTTGTCCGGTTTATATGAAAATCTG 57.198 29.630 0.00 0.00 0.00 2.90
174 175 7.931578 TTGTCCGGTTTATATGAAAATCTGT 57.068 32.000 0.00 0.00 0.00 3.41
175 176 7.931578 TGTCCGGTTTATATGAAAATCTGTT 57.068 32.000 0.00 0.00 0.00 3.16
176 177 7.757526 TGTCCGGTTTATATGAAAATCTGTTG 58.242 34.615 0.00 0.00 0.00 3.33
177 178 7.392113 TGTCCGGTTTATATGAAAATCTGTTGT 59.608 33.333 0.00 0.00 0.00 3.32
178 179 8.885722 GTCCGGTTTATATGAAAATCTGTTGTA 58.114 33.333 0.00 0.00 0.00 2.41
179 180 9.621629 TCCGGTTTATATGAAAATCTGTTGTAT 57.378 29.630 0.00 0.00 0.00 2.29
195 196 9.988350 ATCTGTTGTATTTGTATGAATTTCGTC 57.012 29.630 0.00 0.00 0.00 4.20
196 197 8.447833 TCTGTTGTATTTGTATGAATTTCGTCC 58.552 33.333 0.00 0.00 0.00 4.79
197 198 7.237871 TGTTGTATTTGTATGAATTTCGTCCG 58.762 34.615 0.00 0.00 0.00 4.79
198 199 6.352682 TGTATTTGTATGAATTTCGTCCGG 57.647 37.500 0.00 0.00 0.00 5.14
199 200 5.875910 TGTATTTGTATGAATTTCGTCCGGT 59.124 36.000 0.00 0.00 0.00 5.28
200 201 5.890424 ATTTGTATGAATTTCGTCCGGTT 57.110 34.783 0.00 0.00 0.00 4.44
201 202 6.988622 ATTTGTATGAATTTCGTCCGGTTA 57.011 33.333 0.00 0.00 0.00 2.85
202 203 6.411630 TTTGTATGAATTTCGTCCGGTTAG 57.588 37.500 0.00 0.00 0.00 2.34
203 204 5.075858 TGTATGAATTTCGTCCGGTTAGT 57.924 39.130 0.00 0.00 0.00 2.24
204 205 5.481105 TGTATGAATTTCGTCCGGTTAGTT 58.519 37.500 0.00 0.00 0.00 2.24
205 206 4.939509 ATGAATTTCGTCCGGTTAGTTG 57.060 40.909 0.00 0.00 0.00 3.16
206 207 3.992643 TGAATTTCGTCCGGTTAGTTGA 58.007 40.909 0.00 0.00 0.00 3.18
207 208 4.378774 TGAATTTCGTCCGGTTAGTTGAA 58.621 39.130 0.00 0.00 0.00 2.69
208 209 4.815308 TGAATTTCGTCCGGTTAGTTGAAA 59.185 37.500 0.00 4.80 0.00 2.69
209 210 4.737353 ATTTCGTCCGGTTAGTTGAAAC 57.263 40.909 0.00 0.00 0.00 2.78
210 211 2.153366 TCGTCCGGTTAGTTGAAACC 57.847 50.000 0.00 0.00 44.63 3.27
211 212 1.688197 TCGTCCGGTTAGTTGAAACCT 59.312 47.619 0.00 0.00 45.69 3.50
212 213 1.796459 CGTCCGGTTAGTTGAAACCTG 59.204 52.381 0.00 0.00 45.69 4.00
213 214 2.546373 CGTCCGGTTAGTTGAAACCTGA 60.546 50.000 0.00 0.58 45.69 3.86
214 215 3.116079 TCCGGTTAGTTGAAACCTGAC 57.884 47.619 0.00 0.00 45.69 3.51
215 216 2.701951 TCCGGTTAGTTGAAACCTGACT 59.298 45.455 0.00 0.00 45.69 3.41
216 217 3.135167 TCCGGTTAGTTGAAACCTGACTT 59.865 43.478 0.00 0.00 45.69 3.01
217 218 3.250040 CCGGTTAGTTGAAACCTGACTTG 59.750 47.826 0.00 0.00 45.69 3.16
218 219 4.124238 CGGTTAGTTGAAACCTGACTTGA 58.876 43.478 4.41 0.00 45.69 3.02
219 220 4.573201 CGGTTAGTTGAAACCTGACTTGAA 59.427 41.667 4.41 0.00 45.69 2.69
220 221 5.065474 CGGTTAGTTGAAACCTGACTTGAAA 59.935 40.000 4.41 0.00 45.69 2.69
221 222 6.238648 CGGTTAGTTGAAACCTGACTTGAAAT 60.239 38.462 4.41 0.00 45.69 2.17
222 223 6.918022 GGTTAGTTGAAACCTGACTTGAAATG 59.082 38.462 0.00 0.00 44.67 2.32
223 224 7.416326 GGTTAGTTGAAACCTGACTTGAAATGT 60.416 37.037 0.00 0.00 44.67 2.71
224 225 8.617809 GTTAGTTGAAACCTGACTTGAAATGTA 58.382 33.333 0.00 0.00 0.00 2.29
225 226 7.823745 AGTTGAAACCTGACTTGAAATGTAT 57.176 32.000 0.00 0.00 0.00 2.29
226 227 7.651808 AGTTGAAACCTGACTTGAAATGTATG 58.348 34.615 0.00 0.00 0.00 2.39
227 228 6.012658 TGAAACCTGACTTGAAATGTATGC 57.987 37.500 0.00 0.00 0.00 3.14
228 229 4.685169 AACCTGACTTGAAATGTATGCG 57.315 40.909 0.00 0.00 0.00 4.73
229 230 3.937814 ACCTGACTTGAAATGTATGCGA 58.062 40.909 0.00 0.00 0.00 5.10
230 231 3.935203 ACCTGACTTGAAATGTATGCGAG 59.065 43.478 0.00 0.00 0.00 5.03
231 232 3.242543 CCTGACTTGAAATGTATGCGAGC 60.243 47.826 0.00 0.00 0.00 5.03
232 233 3.333804 TGACTTGAAATGTATGCGAGCA 58.666 40.909 0.00 0.00 0.00 4.26
233 234 3.371898 TGACTTGAAATGTATGCGAGCAG 59.628 43.478 3.58 0.00 0.00 4.24
243 244 3.207669 GCGAGCAGCCTTGGATGG 61.208 66.667 7.05 0.00 40.81 3.51
244 245 2.270205 CGAGCAGCCTTGGATGGT 59.730 61.111 9.45 9.45 0.00 3.55
245 246 1.817099 CGAGCAGCCTTGGATGGTC 60.817 63.158 22.41 22.41 39.86 4.02
246 247 1.817099 GAGCAGCCTTGGATGGTCG 60.817 63.158 18.98 0.00 34.60 4.79
247 248 3.512516 GCAGCCTTGGATGGTCGC 61.513 66.667 7.05 0.00 0.00 5.19
248 249 2.825836 CAGCCTTGGATGGTCGCC 60.826 66.667 0.00 0.00 0.00 5.54
249 250 3.011517 AGCCTTGGATGGTCGCCT 61.012 61.111 0.00 0.00 0.00 5.52
250 251 2.514824 GCCTTGGATGGTCGCCTC 60.515 66.667 0.00 0.00 0.00 4.70
251 252 2.190578 CCTTGGATGGTCGCCTCC 59.809 66.667 0.00 3.40 0.00 4.30
252 253 2.190578 CTTGGATGGTCGCCTCCC 59.809 66.667 9.86 6.24 0.00 4.30
253 254 3.740128 CTTGGATGGTCGCCTCCCG 62.740 68.421 9.86 0.00 38.61 5.14
264 265 4.394712 CCTCCCGCACCTGTGTCC 62.395 72.222 0.00 0.00 0.00 4.02
265 266 4.742201 CTCCCGCACCTGTGTCCG 62.742 72.222 0.00 0.00 0.00 4.79
268 269 4.293648 CCGCACCTGTGTCCGTGA 62.294 66.667 0.00 0.00 31.36 4.35
269 270 2.279851 CGCACCTGTGTCCGTGAA 60.280 61.111 0.00 0.00 31.36 3.18
270 271 2.594962 CGCACCTGTGTCCGTGAAC 61.595 63.158 0.00 0.00 31.36 3.18
271 272 1.522806 GCACCTGTGTCCGTGAACA 60.523 57.895 0.00 0.00 31.36 3.18
272 273 1.498865 GCACCTGTGTCCGTGAACAG 61.499 60.000 0.00 0.00 42.83 3.16
273 274 0.104120 CACCTGTGTCCGTGAACAGA 59.896 55.000 9.46 0.00 45.43 3.41
274 275 1.048601 ACCTGTGTCCGTGAACAGAT 58.951 50.000 9.46 0.00 45.43 2.90
275 276 1.270305 ACCTGTGTCCGTGAACAGATG 60.270 52.381 9.46 0.00 45.43 2.90
276 277 0.792640 CTGTGTCCGTGAACAGATGC 59.207 55.000 3.26 0.00 45.43 3.91
277 278 0.602638 TGTGTCCGTGAACAGATGCC 60.603 55.000 0.00 0.00 0.00 4.40
278 279 1.374125 TGTCCGTGAACAGATGCCG 60.374 57.895 0.00 0.00 0.00 5.69
279 280 2.100631 GTCCGTGAACAGATGCCGG 61.101 63.158 0.00 0.00 39.98 6.13
280 281 2.264480 CCGTGAACAGATGCCGGA 59.736 61.111 5.05 0.00 41.08 5.14
281 282 1.811266 CCGTGAACAGATGCCGGAG 60.811 63.158 5.05 0.00 41.08 4.63
282 283 2.456119 CGTGAACAGATGCCGGAGC 61.456 63.158 5.05 0.00 40.48 4.70
298 299 2.809174 GCAAATTTGCGGGTCGGC 60.809 61.111 26.15 2.23 45.11 5.54
299 300 2.503809 CAAATTTGCGGGTCGGCG 60.504 61.111 5.01 0.00 35.06 6.46
300 301 2.981350 AAATTTGCGGGTCGGCGT 60.981 55.556 6.85 0.00 35.06 5.68
301 302 2.557372 AAATTTGCGGGTCGGCGTT 61.557 52.632 6.85 0.00 35.06 4.84
302 303 2.741116 AAATTTGCGGGTCGGCGTTG 62.741 55.000 6.85 0.00 35.06 4.10
307 308 2.744709 CGGGTCGGCGTTGGAAAT 60.745 61.111 6.85 0.00 0.00 2.17
308 309 2.874751 GGGTCGGCGTTGGAAATG 59.125 61.111 6.85 0.00 35.44 2.32
316 317 2.652313 CGTTGGAAATGCCCTTGGA 58.348 52.632 0.00 0.00 34.97 3.53
317 318 1.185315 CGTTGGAAATGCCCTTGGAT 58.815 50.000 0.00 0.00 34.97 3.41
318 319 1.134946 CGTTGGAAATGCCCTTGGATC 59.865 52.381 0.00 0.00 34.97 3.36
319 320 2.178580 GTTGGAAATGCCCTTGGATCA 58.821 47.619 0.00 0.00 34.97 2.92
320 321 1.851304 TGGAAATGCCCTTGGATCAC 58.149 50.000 0.00 0.00 34.97 3.06
321 322 1.358787 TGGAAATGCCCTTGGATCACT 59.641 47.619 0.00 0.00 34.97 3.41
322 323 2.580322 TGGAAATGCCCTTGGATCACTA 59.420 45.455 0.00 0.00 34.97 2.74
323 324 3.011144 TGGAAATGCCCTTGGATCACTAA 59.989 43.478 0.00 0.00 34.97 2.24
324 325 4.023291 GGAAATGCCCTTGGATCACTAAA 58.977 43.478 0.00 0.00 0.00 1.85
325 326 4.466015 GGAAATGCCCTTGGATCACTAAAA 59.534 41.667 0.00 0.00 0.00 1.52
326 327 5.129320 GGAAATGCCCTTGGATCACTAAAAT 59.871 40.000 0.00 0.00 0.00 1.82
327 328 6.323739 GGAAATGCCCTTGGATCACTAAAATA 59.676 38.462 0.00 0.00 0.00 1.40
328 329 6.966534 AATGCCCTTGGATCACTAAAATAG 57.033 37.500 0.00 0.00 0.00 1.73
329 330 5.450818 TGCCCTTGGATCACTAAAATAGT 57.549 39.130 0.00 0.00 40.28 2.12
357 358 9.771140 ATCTAAAAGATATTATACTCCCTCCGT 57.229 33.333 0.00 0.00 32.12 4.69
358 359 9.240734 TCTAAAAGATATTATACTCCCTCCGTC 57.759 37.037 0.00 0.00 0.00 4.79
359 360 6.854091 AAAGATATTATACTCCCTCCGTCC 57.146 41.667 0.00 0.00 0.00 4.79
360 361 4.525024 AGATATTATACTCCCTCCGTCCG 58.475 47.826 0.00 0.00 0.00 4.79
361 362 2.965671 ATTATACTCCCTCCGTCCGA 57.034 50.000 0.00 0.00 0.00 4.55
362 363 2.734755 TTATACTCCCTCCGTCCGAA 57.265 50.000 0.00 0.00 0.00 4.30
363 364 2.734755 TATACTCCCTCCGTCCGAAA 57.265 50.000 0.00 0.00 0.00 3.46
364 365 1.856629 ATACTCCCTCCGTCCGAAAA 58.143 50.000 0.00 0.00 0.00 2.29
365 366 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
366 367 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
367 368 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
368 369 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
369 370 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
370 371 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
371 372 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
372 373 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
373 374 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
374 375 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
375 376 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
376 377 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
377 378 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
378 379 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
379 380 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
380 381 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
381 382 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
382 383 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
383 384 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
384 385 7.975616 CCGAAAATACTTGTCATCAAAATGGAT 59.024 33.333 0.00 0.00 33.42 3.41
392 393 8.096414 ACTTGTCATCAAAATGGATAAAAAGGG 58.904 33.333 0.00 0.00 33.42 3.95
393 394 7.789202 TGTCATCAAAATGGATAAAAAGGGA 57.211 32.000 0.00 0.00 33.42 4.20
394 395 8.378115 TGTCATCAAAATGGATAAAAAGGGAT 57.622 30.769 0.00 0.00 33.42 3.85
395 396 8.259411 TGTCATCAAAATGGATAAAAAGGGATG 58.741 33.333 0.00 0.00 33.42 3.51
396 397 8.260114 GTCATCAAAATGGATAAAAAGGGATGT 58.740 33.333 0.00 0.00 33.42 3.06
397 398 9.486123 TCATCAAAATGGATAAAAAGGGATGTA 57.514 29.630 0.00 0.00 33.42 2.29
400 401 9.713684 TCAAAATGGATAAAAAGGGATGTATCT 57.286 29.630 0.00 0.00 0.00 1.98
406 407 9.225682 TGGATAAAAAGGGATGTATCTAGAACT 57.774 33.333 0.00 0.00 0.00 3.01
415 416 9.364653 AGGGATGTATCTAGAACTAAAATACGT 57.635 33.333 0.00 0.00 0.00 3.57
416 417 9.978044 GGGATGTATCTAGAACTAAAATACGTT 57.022 33.333 0.00 0.00 0.00 3.99
452 453 9.918630 CTTCTTTTATCCATTTTGATGACAAGT 57.081 29.630 0.00 0.00 37.32 3.16
459 460 8.915871 ATCCATTTTGATGACAAGTATTTTCG 57.084 30.769 0.00 0.00 37.32 3.46
460 461 7.312154 TCCATTTTGATGACAAGTATTTTCGG 58.688 34.615 0.00 0.00 37.32 4.30
461 462 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
462 463 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
463 464 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
464 465 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
465 466 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
466 467 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
467 468 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
468 469 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
469 470 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
470 471 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
471 472 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
472 473 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
473 474 1.856629 TTTTCGGACGGAGGGAGTAT 58.143 50.000 0.00 0.00 0.00 2.12
474 475 1.856629 TTTCGGACGGAGGGAGTATT 58.143 50.000 0.00 0.00 0.00 1.89
475 476 1.856629 TTCGGACGGAGGGAGTATTT 58.143 50.000 0.00 0.00 0.00 1.40
476 477 1.396653 TCGGACGGAGGGAGTATTTC 58.603 55.000 0.00 0.00 0.00 2.17
477 478 1.064166 TCGGACGGAGGGAGTATTTCT 60.064 52.381 0.00 0.00 0.00 2.52
478 479 1.755380 CGGACGGAGGGAGTATTTCTT 59.245 52.381 0.00 0.00 0.00 2.52
479 480 2.167900 CGGACGGAGGGAGTATTTCTTT 59.832 50.000 0.00 0.00 0.00 2.52
480 481 3.382546 CGGACGGAGGGAGTATTTCTTTA 59.617 47.826 0.00 0.00 0.00 1.85
481 482 4.691175 GGACGGAGGGAGTATTTCTTTAC 58.309 47.826 0.00 0.00 0.00 2.01
482 483 4.357996 GACGGAGGGAGTATTTCTTTACG 58.642 47.826 0.00 0.00 0.00 3.18
483 484 4.019174 ACGGAGGGAGTATTTCTTTACGA 58.981 43.478 0.00 0.00 0.00 3.43
484 485 4.463891 ACGGAGGGAGTATTTCTTTACGAA 59.536 41.667 0.00 0.00 0.00 3.85
485 486 5.041940 CGGAGGGAGTATTTCTTTACGAAG 58.958 45.833 0.00 0.00 32.21 3.79
486 487 5.163581 CGGAGGGAGTATTTCTTTACGAAGA 60.164 44.000 0.00 0.00 40.07 2.87
487 488 6.274579 GGAGGGAGTATTTCTTTACGAAGAG 58.725 44.000 0.00 0.00 42.55 2.85
488 489 6.096564 GGAGGGAGTATTTCTTTACGAAGAGA 59.903 42.308 0.00 0.00 42.55 3.10
489 490 7.102847 AGGGAGTATTTCTTTACGAAGAGAG 57.897 40.000 0.00 0.00 42.55 3.20
490 491 6.664384 AGGGAGTATTTCTTTACGAAGAGAGT 59.336 38.462 0.00 0.00 42.55 3.24
491 492 7.833183 AGGGAGTATTTCTTTACGAAGAGAGTA 59.167 37.037 0.00 0.00 42.55 2.59
492 493 8.631797 GGGAGTATTTCTTTACGAAGAGAGTAT 58.368 37.037 0.00 0.00 42.55 2.12
498 499 9.988815 ATTTCTTTACGAAGAGAGTATATGCAT 57.011 29.630 3.79 3.79 42.55 3.96
501 502 9.894783 TCTTTACGAAGAGAGTATATGCATAAC 57.105 33.333 11.13 10.19 36.99 1.89
502 503 9.678941 CTTTACGAAGAGAGTATATGCATAACA 57.321 33.333 11.13 0.00 34.71 2.41
504 505 9.626045 TTACGAAGAGAGTATATGCATAACATG 57.374 33.333 11.13 0.00 40.06 3.21
505 506 7.093354 ACGAAGAGAGTATATGCATAACATGG 58.907 38.462 11.13 0.00 40.06 3.66
506 507 6.533012 CGAAGAGAGTATATGCATAACATGGG 59.467 42.308 11.13 0.00 40.06 4.00
507 508 6.942163 AGAGAGTATATGCATAACATGGGT 57.058 37.500 11.13 0.00 40.06 4.51
508 509 6.940739 AGAGAGTATATGCATAACATGGGTC 58.059 40.000 11.13 2.60 40.06 4.46
516 517 2.094752 GCATAACATGGGTCTTTTGCGT 60.095 45.455 0.00 0.00 0.00 5.24
532 533 1.792301 CGTGCATCCACTCAGCTTG 59.208 57.895 0.00 0.00 39.86 4.01
548 549 0.179020 CTTGTCCCAGTTGAGCCACA 60.179 55.000 0.00 0.00 0.00 4.17
549 550 0.179020 TTGTCCCAGTTGAGCCACAG 60.179 55.000 0.00 0.00 0.00 3.66
567 569 4.015084 CACAGATGGAGAGAGCCAAAAAT 58.985 43.478 0.00 0.00 42.16 1.82
583 585 5.649557 CCAAAAATGATGCAATCTACCGAA 58.350 37.500 0.00 0.00 45.81 4.30
593 595 2.125773 ATCTACCGAACGTCTCCTGT 57.874 50.000 0.00 0.00 0.00 4.00
594 596 1.446907 TCTACCGAACGTCTCCTGTC 58.553 55.000 0.00 0.00 0.00 3.51
595 597 1.002888 TCTACCGAACGTCTCCTGTCT 59.997 52.381 0.00 0.00 0.00 3.41
596 598 2.234661 TCTACCGAACGTCTCCTGTCTA 59.765 50.000 0.00 0.00 0.00 2.59
597 599 1.163554 ACCGAACGTCTCCTGTCTAC 58.836 55.000 0.00 0.00 0.00 2.59
626 628 3.719268 ATACATGGGCAGAGTGACAAA 57.281 42.857 0.00 0.00 0.00 2.83
653 655 2.610479 GCAGTGCAGCAGACTTGTACTA 60.610 50.000 11.09 0.00 39.08 1.82
654 656 3.249091 CAGTGCAGCAGACTTGTACTAG 58.751 50.000 0.00 2.56 39.08 2.57
655 657 1.996191 GTGCAGCAGACTTGTACTAGC 59.004 52.381 0.00 0.00 0.00 3.42
656 658 1.618343 TGCAGCAGACTTGTACTAGCA 59.382 47.619 4.10 0.00 0.00 3.49
657 659 2.234661 TGCAGCAGACTTGTACTAGCAT 59.765 45.455 4.10 0.00 0.00 3.79
658 660 2.863137 GCAGCAGACTTGTACTAGCATC 59.137 50.000 4.10 0.00 0.00 3.91
659 661 3.111838 CAGCAGACTTGTACTAGCATCG 58.888 50.000 4.10 0.00 0.00 3.84
660 662 2.755655 AGCAGACTTGTACTAGCATCGT 59.244 45.455 4.10 0.00 0.00 3.73
661 663 2.854777 GCAGACTTGTACTAGCATCGTG 59.145 50.000 4.10 0.00 0.00 4.35
708 710 2.320587 GCTGACTCACACCAAGCCG 61.321 63.158 0.00 0.00 0.00 5.52
723 725 4.104776 CCAAGCCGTGCACTAAATTATTG 58.895 43.478 16.19 9.48 0.00 1.90
890 921 5.479306 ACTTGAACTCATACGTGCAACTAT 58.521 37.500 0.00 0.00 29.58 2.12
1086 1143 2.810887 GACGATGCTGCTGCGACA 60.811 61.111 18.40 0.00 43.34 4.35
1116 1173 0.320697 ACGCTCCAGTTCCAGGTAAC 59.679 55.000 0.00 0.00 0.00 2.50
1195 1256 1.002430 ACATGATTCTGTCTGGTGCGT 59.998 47.619 0.00 0.00 0.00 5.24
1198 1259 0.950555 GATTCTGTCTGGTGCGTGCA 60.951 55.000 0.00 0.00 0.00 4.57
1202 1263 3.356267 GTCTGGTGCGTGCATGCA 61.356 61.111 29.30 29.30 43.95 3.96
1621 1685 7.149973 CAGCTAGCCCGTAATTATTTACAGTA 58.850 38.462 12.13 0.00 38.06 2.74
1670 1734 2.491271 CGCGCACGTACGTTCTACC 61.491 63.158 20.23 4.28 34.88 3.18
1682 1746 4.416505 ACGTTCTACCAGTTCTTCTACG 57.583 45.455 0.00 0.00 0.00 3.51
1683 1747 3.190118 ACGTTCTACCAGTTCTTCTACGG 59.810 47.826 0.00 0.00 0.00 4.02
1684 1748 3.438087 CGTTCTACCAGTTCTTCTACGGA 59.562 47.826 0.00 0.00 0.00 4.69
1685 1749 4.671250 CGTTCTACCAGTTCTTCTACGGAC 60.671 50.000 0.00 0.00 0.00 4.79
1686 1750 3.350833 TCTACCAGTTCTTCTACGGACC 58.649 50.000 0.00 0.00 0.00 4.46
1692 1760 1.252904 TTCTTCTACGGACCCCCACG 61.253 60.000 0.00 0.00 0.00 4.94
1721 1789 1.000283 CTAGCCTACATGCTCTTCCCG 60.000 57.143 0.00 0.00 41.68 5.14
1724 1793 1.679032 GCCTACATGCTCTTCCCGTTT 60.679 52.381 0.00 0.00 0.00 3.60
1749 1818 1.450312 AATGCTGGCAGTCGCTACC 60.450 57.895 17.16 0.00 38.60 3.18
1750 1819 1.903877 AATGCTGGCAGTCGCTACCT 61.904 55.000 17.16 0.00 38.60 3.08
1770 1839 3.094572 CTCAAAACAGGGATTGGCAGAT 58.905 45.455 0.00 0.00 0.00 2.90
1771 1840 2.827322 TCAAAACAGGGATTGGCAGATG 59.173 45.455 0.00 0.00 0.00 2.90
1772 1841 1.856629 AAACAGGGATTGGCAGATGG 58.143 50.000 0.00 0.00 0.00 3.51
1773 1842 0.706433 AACAGGGATTGGCAGATGGT 59.294 50.000 0.00 0.00 0.00 3.55
1774 1843 0.033796 ACAGGGATTGGCAGATGGTG 60.034 55.000 0.00 0.00 0.00 4.17
1775 1844 0.754217 CAGGGATTGGCAGATGGTGG 60.754 60.000 0.00 0.00 0.00 4.61
1776 1845 1.217057 AGGGATTGGCAGATGGTGGT 61.217 55.000 0.00 0.00 0.00 4.16
1777 1846 0.324645 GGGATTGGCAGATGGTGGTT 60.325 55.000 0.00 0.00 0.00 3.67
1778 1847 1.560505 GGATTGGCAGATGGTGGTTT 58.439 50.000 0.00 0.00 0.00 3.27
1779 1848 2.622977 GGGATTGGCAGATGGTGGTTTA 60.623 50.000 0.00 0.00 0.00 2.01
1780 1849 2.427095 GGATTGGCAGATGGTGGTTTAC 59.573 50.000 0.00 0.00 0.00 2.01
1781 1850 2.666272 TTGGCAGATGGTGGTTTACA 57.334 45.000 0.00 0.00 0.00 2.41
1782 1851 2.666272 TGGCAGATGGTGGTTTACAA 57.334 45.000 0.00 0.00 0.00 2.41
1783 1852 3.168035 TGGCAGATGGTGGTTTACAAT 57.832 42.857 0.00 0.00 0.00 2.71
1784 1853 2.824936 TGGCAGATGGTGGTTTACAATG 59.175 45.455 0.00 0.00 0.00 2.82
1785 1854 2.166254 GGCAGATGGTGGTTTACAATGG 59.834 50.000 0.00 0.00 0.00 3.16
1786 1855 2.825532 GCAGATGGTGGTTTACAATGGT 59.174 45.455 0.00 0.00 0.00 3.55
1787 1856 3.258123 GCAGATGGTGGTTTACAATGGTT 59.742 43.478 0.00 0.00 0.00 3.67
1788 1857 4.808558 CAGATGGTGGTTTACAATGGTTG 58.191 43.478 0.00 0.00 0.00 3.77
1789 1858 3.258123 AGATGGTGGTTTACAATGGTTGC 59.742 43.478 0.00 0.00 0.00 4.17
1790 1859 1.689273 TGGTGGTTTACAATGGTTGCC 59.311 47.619 0.00 0.00 0.00 4.52
1791 1860 1.001520 GGTGGTTTACAATGGTTGCCC 59.998 52.381 0.00 0.00 0.00 5.36
1792 1861 1.001520 GTGGTTTACAATGGTTGCCCC 59.998 52.381 0.00 0.00 0.00 5.80
1793 1862 0.245266 GGTTTACAATGGTTGCCCCG 59.755 55.000 0.00 0.00 35.15 5.73
1833 1902 9.353999 GTCACCAGTGGATATTTTTGTAATTTC 57.646 33.333 18.40 0.00 0.00 2.17
1947 2018 7.654568 GCTTCCTTAGCTTAACCTTGTTTTTA 58.345 34.615 0.00 0.00 46.77 1.52
1956 2027 8.417884 AGCTTAACCTTGTTTTTAGCAACAATA 58.582 29.630 1.05 0.00 43.93 1.90
1973 2044 8.612619 AGCAACAATATTACTTCCTTAATCACG 58.387 33.333 0.00 0.00 0.00 4.35
1974 2045 7.376072 GCAACAATATTACTTCCTTAATCACGC 59.624 37.037 0.00 0.00 0.00 5.34
1978 2052 9.781834 CAATATTACTTCCTTAATCACGCAAAA 57.218 29.630 0.00 0.00 0.00 2.44
2059 2134 1.568118 AATAACCGAGGGTGGGGTGG 61.568 60.000 0.00 0.00 35.34 4.61
2060 2135 2.480255 ATAACCGAGGGTGGGGTGGA 62.480 60.000 0.00 0.00 35.34 4.02
2072 2150 2.551032 GTGGGGTGGAAAAAGAACTACG 59.449 50.000 0.00 0.00 0.00 3.51
2076 2154 2.350484 GGTGGAAAAAGAACTACGCAGC 60.350 50.000 0.00 0.00 0.00 5.25
2143 2221 0.521291 AACTGCACACACACACACAC 59.479 50.000 0.00 0.00 0.00 3.82
2144 2222 0.605050 ACTGCACACACACACACACA 60.605 50.000 0.00 0.00 0.00 3.72
2145 2223 0.179192 CTGCACACACACACACACAC 60.179 55.000 0.00 0.00 0.00 3.82
2146 2224 0.886490 TGCACACACACACACACACA 60.886 50.000 0.00 0.00 0.00 3.72
2147 2225 0.454285 GCACACACACACACACACAC 60.454 55.000 0.00 0.00 0.00 3.82
2148 2226 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2149 2227 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2150 2228 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2151 2229 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2152 2230 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2153 2231 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2154 2232 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2155 2233 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2156 2234 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2157 2235 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2158 2236 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2159 2237 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2160 2238 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2161 2239 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2162 2240 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2163 2241 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2164 2242 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2165 2243 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2166 2244 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2167 2245 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2168 2246 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2169 2247 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2170 2248 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2171 2249 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2172 2250 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2188 2266 0.179227 CACACACACACACACACACG 60.179 55.000 0.00 0.00 0.00 4.49
2196 2274 2.668945 CACACACACACACGTGAGTTTA 59.331 45.455 25.01 0.00 43.36 2.01
2291 2369 9.874205 ACAAATTTCATACATTTATTGTCAGGG 57.126 29.630 0.00 0.00 39.87 4.45
2359 2439 2.756840 ACCGCTGTAGTTCTTTACCC 57.243 50.000 0.00 0.00 0.00 3.69
2401 2481 3.473625 TCATCGATGGCTCTCGTTACTA 58.526 45.455 24.61 0.00 39.62 1.82
2428 2508 4.412199 TCAATCTCCTTTCCATTATCGGGT 59.588 41.667 0.00 0.00 0.00 5.28
2627 2707 4.090354 CGTGCATTTGTTTCTTTGCCTATG 59.910 41.667 0.00 0.00 34.20 2.23
2644 2724 2.196742 ATGCCTCCTTCTCCCATGTA 57.803 50.000 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.027385 CTCCATCTGTCGTCTCCATGA 58.973 52.381 0.00 0.00 0.00 3.07
1 2 1.068281 CCTCCATCTGTCGTCTCCATG 59.932 57.143 0.00 0.00 0.00 3.66
2 3 1.063642 TCCTCCATCTGTCGTCTCCAT 60.064 52.381 0.00 0.00 0.00 3.41
3 4 0.331616 TCCTCCATCTGTCGTCTCCA 59.668 55.000 0.00 0.00 0.00 3.86
4 5 0.741915 GTCCTCCATCTGTCGTCTCC 59.258 60.000 0.00 0.00 0.00 3.71
5 6 0.741915 GGTCCTCCATCTGTCGTCTC 59.258 60.000 0.00 0.00 0.00 3.36
6 7 0.333312 AGGTCCTCCATCTGTCGTCT 59.667 55.000 0.00 0.00 35.89 4.18
7 8 0.457851 CAGGTCCTCCATCTGTCGTC 59.542 60.000 0.00 0.00 35.89 4.20
8 9 0.972983 CCAGGTCCTCCATCTGTCGT 60.973 60.000 0.00 0.00 35.89 4.34
9 10 0.972983 ACCAGGTCCTCCATCTGTCG 60.973 60.000 0.00 0.00 35.89 4.35
10 11 1.065854 CAACCAGGTCCTCCATCTGTC 60.066 57.143 0.00 0.00 35.89 3.51
11 12 0.987294 CAACCAGGTCCTCCATCTGT 59.013 55.000 0.00 0.00 35.89 3.41
12 13 0.393537 GCAACCAGGTCCTCCATCTG 60.394 60.000 0.00 0.00 35.89 2.90
13 14 1.566298 GGCAACCAGGTCCTCCATCT 61.566 60.000 0.00 0.00 35.89 2.90
14 15 1.077429 GGCAACCAGGTCCTCCATC 60.077 63.158 0.00 0.00 35.89 3.51
15 16 2.971598 CGGCAACCAGGTCCTCCAT 61.972 63.158 0.00 0.00 35.89 3.41
16 17 3.636231 CGGCAACCAGGTCCTCCA 61.636 66.667 0.00 0.00 35.89 3.86
17 18 2.804828 CTTCGGCAACCAGGTCCTCC 62.805 65.000 0.00 0.00 0.00 4.30
18 19 1.376037 CTTCGGCAACCAGGTCCTC 60.376 63.158 0.00 0.00 0.00 3.71
19 20 2.750350 CTTCGGCAACCAGGTCCT 59.250 61.111 0.00 0.00 0.00 3.85
20 21 3.056328 GCTTCGGCAACCAGGTCC 61.056 66.667 0.00 0.00 41.33 4.46
21 22 3.423154 CGCTTCGGCAACCAGGTC 61.423 66.667 0.00 0.00 41.88 3.85
32 33 4.211374 CCACTTCCTTTATATTCCGCTTCG 59.789 45.833 0.00 0.00 0.00 3.79
33 34 5.236695 GTCCACTTCCTTTATATTCCGCTTC 59.763 44.000 0.00 0.00 0.00 3.86
34 35 5.123936 GTCCACTTCCTTTATATTCCGCTT 58.876 41.667 0.00 0.00 0.00 4.68
35 36 4.704965 GTCCACTTCCTTTATATTCCGCT 58.295 43.478 0.00 0.00 0.00 5.52
36 37 3.493503 CGTCCACTTCCTTTATATTCCGC 59.506 47.826 0.00 0.00 0.00 5.54
37 38 4.743644 GTCGTCCACTTCCTTTATATTCCG 59.256 45.833 0.00 0.00 0.00 4.30
38 39 4.743644 CGTCGTCCACTTCCTTTATATTCC 59.256 45.833 0.00 0.00 0.00 3.01
39 40 4.743644 CCGTCGTCCACTTCCTTTATATTC 59.256 45.833 0.00 0.00 0.00 1.75
40 41 4.161001 ACCGTCGTCCACTTCCTTTATATT 59.839 41.667 0.00 0.00 0.00 1.28
41 42 3.703052 ACCGTCGTCCACTTCCTTTATAT 59.297 43.478 0.00 0.00 0.00 0.86
42 43 3.091545 ACCGTCGTCCACTTCCTTTATA 58.908 45.455 0.00 0.00 0.00 0.98
43 44 1.897802 ACCGTCGTCCACTTCCTTTAT 59.102 47.619 0.00 0.00 0.00 1.40
44 45 1.270550 GACCGTCGTCCACTTCCTTTA 59.729 52.381 0.00 0.00 32.40 1.85
45 46 0.033090 GACCGTCGTCCACTTCCTTT 59.967 55.000 0.00 0.00 32.40 3.11
46 47 1.111116 TGACCGTCGTCCACTTCCTT 61.111 55.000 0.00 0.00 38.32 3.36
47 48 1.529948 TGACCGTCGTCCACTTCCT 60.530 57.895 0.00 0.00 38.32 3.36
48 49 1.372623 GTGACCGTCGTCCACTTCC 60.373 63.158 6.91 0.00 38.32 3.46
49 50 1.372623 GGTGACCGTCGTCCACTTC 60.373 63.158 12.08 0.00 38.32 3.01
50 51 2.732658 GGTGACCGTCGTCCACTT 59.267 61.111 12.08 0.00 38.32 3.16
51 52 3.300765 GGGTGACCGTCGTCCACT 61.301 66.667 12.56 0.00 43.64 4.00
62 63 1.785647 AACCTATCCTACGGGGTGAC 58.214 55.000 0.00 0.00 36.25 3.67
63 64 2.555732 AAACCTATCCTACGGGGTGA 57.444 50.000 0.00 0.00 36.25 4.02
64 65 2.631545 CCTAAACCTATCCTACGGGGTG 59.368 54.545 0.00 0.00 36.25 4.61
65 66 2.426855 CCCTAAACCTATCCTACGGGGT 60.427 54.545 0.00 0.00 36.25 4.95
66 67 2.254508 CCCTAAACCTATCCTACGGGG 58.745 57.143 0.00 0.00 0.00 5.73
67 68 1.622312 GCCCTAAACCTATCCTACGGG 59.378 57.143 0.00 0.00 0.00 5.28
68 69 1.622312 GGCCCTAAACCTATCCTACGG 59.378 57.143 0.00 0.00 0.00 4.02
69 70 1.271656 CGGCCCTAAACCTATCCTACG 59.728 57.143 0.00 0.00 0.00 3.51
70 71 1.622312 CCGGCCCTAAACCTATCCTAC 59.378 57.143 0.00 0.00 0.00 3.18
71 72 1.483686 CCCGGCCCTAAACCTATCCTA 60.484 57.143 0.00 0.00 0.00 2.94
72 73 0.767060 CCCGGCCCTAAACCTATCCT 60.767 60.000 0.00 0.00 0.00 3.24
73 74 1.058428 ACCCGGCCCTAAACCTATCC 61.058 60.000 0.00 0.00 0.00 2.59
74 75 0.395686 GACCCGGCCCTAAACCTATC 59.604 60.000 0.00 0.00 0.00 2.08
75 76 1.405272 CGACCCGGCCCTAAACCTAT 61.405 60.000 0.00 0.00 0.00 2.57
76 77 2.059786 CGACCCGGCCCTAAACCTA 61.060 63.158 0.00 0.00 0.00 3.08
77 78 3.396570 CGACCCGGCCCTAAACCT 61.397 66.667 0.00 0.00 0.00 3.50
79 80 3.617143 AAGCGACCCGGCCCTAAAC 62.617 63.158 0.00 0.00 0.00 2.01
80 81 2.414658 AAAAGCGACCCGGCCCTAAA 62.415 55.000 0.00 0.00 0.00 1.85
81 82 2.414658 AAAAAGCGACCCGGCCCTAA 62.415 55.000 0.00 0.00 0.00 2.69
82 83 2.897762 AAAAAGCGACCCGGCCCTA 61.898 57.895 0.00 0.00 0.00 3.53
83 84 4.280019 AAAAAGCGACCCGGCCCT 62.280 61.111 0.00 0.00 0.00 5.19
99 100 9.619316 CATTACATTTCGAACATTTAGGACAAA 57.381 29.630 0.00 0.00 0.00 2.83
100 101 9.004717 TCATTACATTTCGAACATTTAGGACAA 57.995 29.630 0.00 0.00 0.00 3.18
101 102 8.554835 TCATTACATTTCGAACATTTAGGACA 57.445 30.769 0.00 0.00 0.00 4.02
102 103 9.834628 TTTCATTACATTTCGAACATTTAGGAC 57.165 29.630 0.00 0.00 0.00 3.85
109 110 9.689976 TGAACATTTTCATTACATTTCGAACAT 57.310 25.926 0.00 0.00 36.79 2.71
110 111 9.521503 TTGAACATTTTCATTACATTTCGAACA 57.478 25.926 0.00 0.00 41.50 3.18
135 136 8.669946 AAACCGGACAAAATTCATTACATTTT 57.330 26.923 9.46 0.00 34.75 1.82
136 137 9.936759 ATAAACCGGACAAAATTCATTACATTT 57.063 25.926 9.46 0.00 0.00 2.32
147 148 9.801873 CAGATTTTCATATAAACCGGACAAAAT 57.198 29.630 9.46 6.32 0.00 1.82
148 149 8.798402 ACAGATTTTCATATAAACCGGACAAAA 58.202 29.630 9.46 1.51 0.00 2.44
149 150 8.343168 ACAGATTTTCATATAAACCGGACAAA 57.657 30.769 9.46 0.00 0.00 2.83
150 151 7.931578 ACAGATTTTCATATAAACCGGACAA 57.068 32.000 9.46 0.00 0.00 3.18
151 152 7.392113 ACAACAGATTTTCATATAAACCGGACA 59.608 33.333 9.46 0.00 0.00 4.02
152 153 7.758495 ACAACAGATTTTCATATAAACCGGAC 58.242 34.615 9.46 0.00 0.00 4.79
153 154 7.931578 ACAACAGATTTTCATATAAACCGGA 57.068 32.000 9.46 0.00 0.00 5.14
169 170 9.988350 GACGAAATTCATACAAATACAACAGAT 57.012 29.630 0.00 0.00 0.00 2.90
170 171 8.447833 GGACGAAATTCATACAAATACAACAGA 58.552 33.333 0.00 0.00 0.00 3.41
171 172 7.425309 CGGACGAAATTCATACAAATACAACAG 59.575 37.037 0.00 0.00 0.00 3.16
172 173 7.237871 CGGACGAAATTCATACAAATACAACA 58.762 34.615 0.00 0.00 0.00 3.33
173 174 6.685403 CCGGACGAAATTCATACAAATACAAC 59.315 38.462 0.00 0.00 0.00 3.32
174 175 6.372103 ACCGGACGAAATTCATACAAATACAA 59.628 34.615 9.46 0.00 0.00 2.41
175 176 5.875910 ACCGGACGAAATTCATACAAATACA 59.124 36.000 9.46 0.00 0.00 2.29
176 177 6.354039 ACCGGACGAAATTCATACAAATAC 57.646 37.500 9.46 0.00 0.00 1.89
177 178 6.988622 AACCGGACGAAATTCATACAAATA 57.011 33.333 9.46 0.00 0.00 1.40
178 179 5.890424 AACCGGACGAAATTCATACAAAT 57.110 34.783 9.46 0.00 0.00 2.32
179 180 5.933463 ACTAACCGGACGAAATTCATACAAA 59.067 36.000 9.46 0.00 0.00 2.83
180 181 5.481105 ACTAACCGGACGAAATTCATACAA 58.519 37.500 9.46 0.00 0.00 2.41
181 182 5.075858 ACTAACCGGACGAAATTCATACA 57.924 39.130 9.46 0.00 0.00 2.29
182 183 5.577945 TCAACTAACCGGACGAAATTCATAC 59.422 40.000 9.46 0.00 0.00 2.39
183 184 5.722263 TCAACTAACCGGACGAAATTCATA 58.278 37.500 9.46 0.00 0.00 2.15
184 185 4.571919 TCAACTAACCGGACGAAATTCAT 58.428 39.130 9.46 0.00 0.00 2.57
185 186 3.992643 TCAACTAACCGGACGAAATTCA 58.007 40.909 9.46 0.00 0.00 2.57
186 187 4.996062 TTCAACTAACCGGACGAAATTC 57.004 40.909 9.46 0.00 0.00 2.17
187 188 4.023792 GGTTTCAACTAACCGGACGAAATT 60.024 41.667 9.46 0.00 38.33 1.82
188 189 3.499537 GGTTTCAACTAACCGGACGAAAT 59.500 43.478 9.46 0.00 38.33 2.17
189 190 2.871633 GGTTTCAACTAACCGGACGAAA 59.128 45.455 9.46 4.58 38.33 3.46
190 191 2.482864 GGTTTCAACTAACCGGACGAA 58.517 47.619 9.46 0.00 38.33 3.85
191 192 2.153366 GGTTTCAACTAACCGGACGA 57.847 50.000 9.46 0.00 38.33 4.20
197 198 6.445357 TTTCAAGTCAGGTTTCAACTAACC 57.555 37.500 0.00 0.00 46.45 2.85
198 199 7.480810 ACATTTCAAGTCAGGTTTCAACTAAC 58.519 34.615 0.00 0.00 0.00 2.34
199 200 7.639113 ACATTTCAAGTCAGGTTTCAACTAA 57.361 32.000 0.00 0.00 0.00 2.24
200 201 8.783093 CATACATTTCAAGTCAGGTTTCAACTA 58.217 33.333 0.00 0.00 0.00 2.24
201 202 7.651808 CATACATTTCAAGTCAGGTTTCAACT 58.348 34.615 0.00 0.00 0.00 3.16
202 203 6.363357 GCATACATTTCAAGTCAGGTTTCAAC 59.637 38.462 0.00 0.00 0.00 3.18
203 204 6.446318 GCATACATTTCAAGTCAGGTTTCAA 58.554 36.000 0.00 0.00 0.00 2.69
204 205 5.334802 CGCATACATTTCAAGTCAGGTTTCA 60.335 40.000 0.00 0.00 0.00 2.69
205 206 5.088739 CGCATACATTTCAAGTCAGGTTTC 58.911 41.667 0.00 0.00 0.00 2.78
206 207 4.759693 TCGCATACATTTCAAGTCAGGTTT 59.240 37.500 0.00 0.00 0.00 3.27
207 208 4.323417 TCGCATACATTTCAAGTCAGGTT 58.677 39.130 0.00 0.00 0.00 3.50
208 209 3.935203 CTCGCATACATTTCAAGTCAGGT 59.065 43.478 0.00 0.00 0.00 4.00
209 210 3.242543 GCTCGCATACATTTCAAGTCAGG 60.243 47.826 0.00 0.00 0.00 3.86
210 211 3.371898 TGCTCGCATACATTTCAAGTCAG 59.628 43.478 0.00 0.00 0.00 3.51
211 212 3.333804 TGCTCGCATACATTTCAAGTCA 58.666 40.909 0.00 0.00 0.00 3.41
212 213 3.786818 GCTGCTCGCATACATTTCAAGTC 60.787 47.826 0.00 0.00 38.92 3.01
213 214 2.096496 GCTGCTCGCATACATTTCAAGT 59.904 45.455 0.00 0.00 38.92 3.16
214 215 2.540361 GGCTGCTCGCATACATTTCAAG 60.540 50.000 0.00 0.00 41.67 3.02
215 216 1.401552 GGCTGCTCGCATACATTTCAA 59.598 47.619 0.00 0.00 41.67 2.69
216 217 1.016627 GGCTGCTCGCATACATTTCA 58.983 50.000 0.00 0.00 41.67 2.69
217 218 1.303309 AGGCTGCTCGCATACATTTC 58.697 50.000 0.00 0.00 41.67 2.17
218 219 1.402968 CAAGGCTGCTCGCATACATTT 59.597 47.619 0.00 0.00 41.67 2.32
219 220 1.019673 CAAGGCTGCTCGCATACATT 58.980 50.000 0.00 0.00 41.67 2.71
220 221 0.816825 CCAAGGCTGCTCGCATACAT 60.817 55.000 0.00 0.00 41.67 2.29
221 222 1.450134 CCAAGGCTGCTCGCATACA 60.450 57.895 0.00 0.00 41.67 2.29
222 223 0.533755 ATCCAAGGCTGCTCGCATAC 60.534 55.000 0.00 0.00 41.67 2.39
223 224 0.533531 CATCCAAGGCTGCTCGCATA 60.534 55.000 0.00 0.00 41.67 3.14
224 225 1.822613 CATCCAAGGCTGCTCGCAT 60.823 57.895 0.00 0.00 41.67 4.73
225 226 2.437180 CATCCAAGGCTGCTCGCA 60.437 61.111 0.00 0.00 41.67 5.10
226 227 3.207669 CCATCCAAGGCTGCTCGC 61.208 66.667 0.00 0.00 38.13 5.03
227 228 1.817099 GACCATCCAAGGCTGCTCG 60.817 63.158 0.00 0.00 0.00 5.03
228 229 1.817099 CGACCATCCAAGGCTGCTC 60.817 63.158 0.00 0.00 0.00 4.26
229 230 2.270205 CGACCATCCAAGGCTGCT 59.730 61.111 0.00 0.00 0.00 4.24
230 231 3.512516 GCGACCATCCAAGGCTGC 61.513 66.667 0.00 0.00 0.00 5.25
231 232 2.825836 GGCGACCATCCAAGGCTG 60.826 66.667 0.00 0.00 0.00 4.85
232 233 3.011517 AGGCGACCATCCAAGGCT 61.012 61.111 0.00 0.00 34.56 4.58
233 234 2.514824 GAGGCGACCATCCAAGGC 60.515 66.667 0.00 0.00 0.00 4.35
234 235 2.190578 GGAGGCGACCATCCAAGG 59.809 66.667 0.00 0.00 35.54 3.61
235 236 2.190578 GGGAGGCGACCATCCAAG 59.809 66.667 0.00 0.00 37.33 3.61
236 237 3.781307 CGGGAGGCGACCATCCAA 61.781 66.667 0.00 0.00 37.33 3.53
247 248 4.394712 GGACACAGGTGCGGGAGG 62.395 72.222 0.00 0.00 0.00 4.30
253 254 1.498865 CTGTTCACGGACACAGGTGC 61.499 60.000 0.00 0.00 37.37 5.01
254 255 0.104120 TCTGTTCACGGACACAGGTG 59.896 55.000 9.46 0.00 40.81 4.00
255 256 1.048601 ATCTGTTCACGGACACAGGT 58.951 50.000 9.46 1.09 40.81 4.00
256 257 1.432514 CATCTGTTCACGGACACAGG 58.567 55.000 9.46 0.00 40.81 4.00
257 258 0.792640 GCATCTGTTCACGGACACAG 59.207 55.000 4.26 4.26 41.65 3.66
258 259 0.602638 GGCATCTGTTCACGGACACA 60.603 55.000 0.00 0.00 33.47 3.72
259 260 1.626654 CGGCATCTGTTCACGGACAC 61.627 60.000 0.00 0.00 33.47 3.67
260 261 1.374125 CGGCATCTGTTCACGGACA 60.374 57.895 0.00 0.00 33.47 4.02
261 262 3.474806 CGGCATCTGTTCACGGAC 58.525 61.111 0.00 0.00 33.47 4.79
263 264 1.811266 CTCCGGCATCTGTTCACGG 60.811 63.158 0.00 0.00 45.52 4.94
264 265 2.456119 GCTCCGGCATCTGTTCACG 61.456 63.158 0.00 0.00 38.54 4.35
265 266 1.375908 TGCTCCGGCATCTGTTCAC 60.376 57.895 0.00 0.00 44.28 3.18
266 267 3.067985 TGCTCCGGCATCTGTTCA 58.932 55.556 0.00 0.00 44.28 3.18
282 283 2.503809 CGCCGACCCGCAAATTTG 60.504 61.111 14.03 14.03 0.00 2.32
283 284 2.557372 AACGCCGACCCGCAAATTT 61.557 52.632 0.00 0.00 0.00 1.82
284 285 2.981350 AACGCCGACCCGCAAATT 60.981 55.556 0.00 0.00 0.00 1.82
285 286 3.732892 CAACGCCGACCCGCAAAT 61.733 61.111 0.00 0.00 0.00 2.32
290 291 2.744709 ATTTCCAACGCCGACCCG 60.745 61.111 0.00 0.00 0.00 5.28
291 292 2.874751 CATTTCCAACGCCGACCC 59.125 61.111 0.00 0.00 0.00 4.46
292 293 2.178273 GCATTTCCAACGCCGACC 59.822 61.111 0.00 0.00 0.00 4.79
293 294 2.178273 GGCATTTCCAACGCCGAC 59.822 61.111 0.00 0.00 35.79 4.79
296 297 1.079888 CAAGGGCATTTCCAACGCC 60.080 57.895 0.00 0.00 45.47 5.68
297 298 1.079888 CCAAGGGCATTTCCAACGC 60.080 57.895 0.00 0.00 36.21 4.84
298 299 1.134946 GATCCAAGGGCATTTCCAACG 59.865 52.381 0.00 0.00 36.21 4.10
299 300 2.094026 GTGATCCAAGGGCATTTCCAAC 60.094 50.000 0.00 0.00 36.21 3.77
300 301 2.178580 GTGATCCAAGGGCATTTCCAA 58.821 47.619 0.00 0.00 36.21 3.53
301 302 1.358787 AGTGATCCAAGGGCATTTCCA 59.641 47.619 0.00 0.00 36.21 3.53
302 303 2.149973 AGTGATCCAAGGGCATTTCC 57.850 50.000 0.00 0.00 0.00 3.13
303 304 5.659440 TTTTAGTGATCCAAGGGCATTTC 57.341 39.130 0.00 0.00 0.00 2.17
304 305 6.897413 ACTATTTTAGTGATCCAAGGGCATTT 59.103 34.615 0.00 0.00 37.69 2.32
305 306 6.435164 ACTATTTTAGTGATCCAAGGGCATT 58.565 36.000 0.00 0.00 37.69 3.56
306 307 6.018433 ACTATTTTAGTGATCCAAGGGCAT 57.982 37.500 0.00 0.00 37.69 4.40
307 308 5.450818 ACTATTTTAGTGATCCAAGGGCA 57.549 39.130 0.00 0.00 37.69 5.36
331 332 9.771140 ACGGAGGGAGTATAATATCTTTTAGAT 57.229 33.333 0.00 0.00 38.70 1.98
332 333 9.240734 GACGGAGGGAGTATAATATCTTTTAGA 57.759 37.037 0.00 0.00 0.00 2.10
333 334 8.468399 GGACGGAGGGAGTATAATATCTTTTAG 58.532 40.741 0.00 0.00 0.00 1.85
334 335 7.121759 CGGACGGAGGGAGTATAATATCTTTTA 59.878 40.741 0.00 0.00 0.00 1.52
335 336 6.071503 CGGACGGAGGGAGTATAATATCTTTT 60.072 42.308 0.00 0.00 0.00 2.27
336 337 5.418209 CGGACGGAGGGAGTATAATATCTTT 59.582 44.000 0.00 0.00 0.00 2.52
337 338 4.948621 CGGACGGAGGGAGTATAATATCTT 59.051 45.833 0.00 0.00 0.00 2.40
338 339 4.226846 TCGGACGGAGGGAGTATAATATCT 59.773 45.833 0.00 0.00 0.00 1.98
339 340 4.521146 TCGGACGGAGGGAGTATAATATC 58.479 47.826 0.00 0.00 0.00 1.63
340 341 4.581309 TCGGACGGAGGGAGTATAATAT 57.419 45.455 0.00 0.00 0.00 1.28
341 342 4.371624 TTCGGACGGAGGGAGTATAATA 57.628 45.455 0.00 0.00 0.00 0.98
342 343 2.965671 TCGGACGGAGGGAGTATAAT 57.034 50.000 0.00 0.00 0.00 1.28
343 344 2.734755 TTCGGACGGAGGGAGTATAA 57.265 50.000 0.00 0.00 0.00 0.98
344 345 2.734755 TTTCGGACGGAGGGAGTATA 57.265 50.000 0.00 0.00 0.00 1.47
345 346 1.856629 TTTTCGGACGGAGGGAGTAT 58.143 50.000 0.00 0.00 0.00 2.12
346 347 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
347 348 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
348 349 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
349 350 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
350 351 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
351 352 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
352 353 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
353 354 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
354 355 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
355 356 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
356 357 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
357 358 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
358 359 7.312154 TCCATTTTGATGACAAGTATTTTCGG 58.688 34.615 0.00 0.00 37.32 4.30
359 360 8.915871 ATCCATTTTGATGACAAGTATTTTCG 57.084 30.769 0.00 0.00 37.32 3.46
366 367 8.096414 CCCTTTTTATCCATTTTGATGACAAGT 58.904 33.333 0.00 0.00 37.32 3.16
367 368 8.313292 TCCCTTTTTATCCATTTTGATGACAAG 58.687 33.333 0.00 0.00 37.32 3.16
368 369 8.200024 TCCCTTTTTATCCATTTTGATGACAA 57.800 30.769 0.00 0.00 0.00 3.18
369 370 7.789202 TCCCTTTTTATCCATTTTGATGACA 57.211 32.000 0.00 0.00 0.00 3.58
370 371 8.260114 ACATCCCTTTTTATCCATTTTGATGAC 58.740 33.333 0.00 0.00 32.39 3.06
371 372 8.378115 ACATCCCTTTTTATCCATTTTGATGA 57.622 30.769 0.00 0.00 32.39 2.92
374 375 9.713684 AGATACATCCCTTTTTATCCATTTTGA 57.286 29.630 0.00 0.00 0.00 2.69
380 381 9.225682 AGTTCTAGATACATCCCTTTTTATCCA 57.774 33.333 0.00 0.00 0.00 3.41
389 390 9.364653 ACGTATTTTAGTTCTAGATACATCCCT 57.635 33.333 0.00 0.00 0.00 4.20
390 391 9.978044 AACGTATTTTAGTTCTAGATACATCCC 57.022 33.333 0.00 0.00 0.00 3.85
426 427 9.918630 ACTTGTCATCAAAATGGATAAAAGAAG 57.081 29.630 0.00 0.00 33.42 2.85
434 435 7.975616 CCGAAAATACTTGTCATCAAAATGGAT 59.024 33.333 0.00 0.00 33.42 3.41
435 436 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
436 437 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
437 438 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
438 439 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
439 440 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
440 441 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
441 442 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
442 443 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
443 444 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
444 445 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
445 446 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
446 447 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
447 448 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
448 449 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
449 450 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
450 451 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
451 452 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
452 453 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
453 454 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
454 455 1.856629 ATACTCCCTCCGTCCGAAAA 58.143 50.000 0.00 0.00 0.00 2.29
455 456 1.856629 AATACTCCCTCCGTCCGAAA 58.143 50.000 0.00 0.00 0.00 3.46
456 457 1.753073 GAAATACTCCCTCCGTCCGAA 59.247 52.381 0.00 0.00 0.00 4.30
457 458 1.064166 AGAAATACTCCCTCCGTCCGA 60.064 52.381 0.00 0.00 0.00 4.55
458 459 1.400737 AGAAATACTCCCTCCGTCCG 58.599 55.000 0.00 0.00 0.00 4.79
459 460 3.908643 AAAGAAATACTCCCTCCGTCC 57.091 47.619 0.00 0.00 0.00 4.79
460 461 4.096984 TCGTAAAGAAATACTCCCTCCGTC 59.903 45.833 0.00 0.00 0.00 4.79
461 462 4.019174 TCGTAAAGAAATACTCCCTCCGT 58.981 43.478 0.00 0.00 0.00 4.69
462 463 4.644103 TCGTAAAGAAATACTCCCTCCG 57.356 45.455 0.00 0.00 0.00 4.63
463 464 6.096564 TCTCTTCGTAAAGAAATACTCCCTCC 59.903 42.308 0.00 0.00 40.95 4.30
464 465 7.098074 TCTCTTCGTAAAGAAATACTCCCTC 57.902 40.000 0.00 0.00 40.95 4.30
465 466 6.664384 ACTCTCTTCGTAAAGAAATACTCCCT 59.336 38.462 0.00 0.00 40.95 4.20
466 467 6.865411 ACTCTCTTCGTAAAGAAATACTCCC 58.135 40.000 0.00 0.00 40.95 4.30
472 473 9.988815 ATGCATATACTCTCTTCGTAAAGAAAT 57.011 29.630 0.00 0.00 40.95 2.17
475 476 9.894783 GTTATGCATATACTCTCTTCGTAAAGA 57.105 33.333 7.36 0.00 39.22 2.52
476 477 9.678941 TGTTATGCATATACTCTCTTCGTAAAG 57.321 33.333 7.36 0.00 0.00 1.85
478 479 9.626045 CATGTTATGCATATACTCTCTTCGTAA 57.374 33.333 7.36 0.00 35.74 3.18
479 480 8.244113 CCATGTTATGCATATACTCTCTTCGTA 58.756 37.037 7.36 0.00 35.74 3.43
480 481 7.093354 CCATGTTATGCATATACTCTCTTCGT 58.907 38.462 7.36 0.00 35.74 3.85
481 482 6.533012 CCCATGTTATGCATATACTCTCTTCG 59.467 42.308 7.36 0.00 35.74 3.79
482 483 7.390027 ACCCATGTTATGCATATACTCTCTTC 58.610 38.462 7.36 0.00 35.74 2.87
483 484 7.236432 AGACCCATGTTATGCATATACTCTCTT 59.764 37.037 7.36 0.00 35.74 2.85
484 485 6.728164 AGACCCATGTTATGCATATACTCTCT 59.272 38.462 7.36 0.00 35.74 3.10
485 486 6.940739 AGACCCATGTTATGCATATACTCTC 58.059 40.000 7.36 0.00 35.74 3.20
486 487 6.942163 AGACCCATGTTATGCATATACTCT 57.058 37.500 7.36 5.02 35.74 3.24
487 488 7.986085 AAAGACCCATGTTATGCATATACTC 57.014 36.000 7.36 3.07 35.74 2.59
488 489 7.255590 GCAAAAGACCCATGTTATGCATATACT 60.256 37.037 7.36 0.00 35.74 2.12
489 490 6.863126 GCAAAAGACCCATGTTATGCATATAC 59.137 38.462 7.36 9.26 35.74 1.47
490 491 6.293900 CGCAAAAGACCCATGTTATGCATATA 60.294 38.462 7.36 0.25 35.74 0.86
491 492 5.507817 CGCAAAAGACCCATGTTATGCATAT 60.508 40.000 7.36 0.00 35.74 1.78
492 493 4.202000 CGCAAAAGACCCATGTTATGCATA 60.202 41.667 1.16 1.16 35.74 3.14
493 494 3.429272 CGCAAAAGACCCATGTTATGCAT 60.429 43.478 3.79 3.79 38.60 3.96
494 495 2.094803 CGCAAAAGACCCATGTTATGCA 60.095 45.455 0.00 0.00 33.00 3.96
495 496 2.094752 ACGCAAAAGACCCATGTTATGC 60.095 45.455 0.00 0.00 0.00 3.14
496 497 3.500982 CACGCAAAAGACCCATGTTATG 58.499 45.455 0.00 0.00 0.00 1.90
497 498 2.094752 GCACGCAAAAGACCCATGTTAT 60.095 45.455 0.00 0.00 0.00 1.89
498 499 1.268352 GCACGCAAAAGACCCATGTTA 59.732 47.619 0.00 0.00 0.00 2.41
499 500 0.031994 GCACGCAAAAGACCCATGTT 59.968 50.000 0.00 0.00 0.00 2.71
500 501 1.106351 TGCACGCAAAAGACCCATGT 61.106 50.000 0.00 0.00 0.00 3.21
501 502 0.244450 ATGCACGCAAAAGACCCATG 59.756 50.000 0.00 0.00 0.00 3.66
502 503 0.527565 GATGCACGCAAAAGACCCAT 59.472 50.000 0.00 0.00 0.00 4.00
503 504 1.523154 GGATGCACGCAAAAGACCCA 61.523 55.000 0.00 0.00 0.00 4.51
504 505 1.212751 GGATGCACGCAAAAGACCC 59.787 57.895 0.00 0.00 0.00 4.46
505 506 0.387239 GTGGATGCACGCAAAAGACC 60.387 55.000 0.10 0.00 0.00 3.85
506 507 0.593128 AGTGGATGCACGCAAAAGAC 59.407 50.000 12.02 0.00 0.00 3.01
507 508 0.874390 GAGTGGATGCACGCAAAAGA 59.126 50.000 15.89 0.00 0.00 2.52
508 509 0.592637 TGAGTGGATGCACGCAAAAG 59.407 50.000 20.70 0.00 32.22 2.27
516 517 0.321919 GGACAAGCTGAGTGGATGCA 60.322 55.000 0.00 0.00 0.00 3.96
532 533 0.326264 ATCTGTGGCTCAACTGGGAC 59.674 55.000 0.00 0.00 0.00 4.46
548 549 4.581309 TCATTTTTGGCTCTCTCCATCT 57.419 40.909 0.00 0.00 35.77 2.90
549 550 4.499357 GCATCATTTTTGGCTCTCTCCATC 60.499 45.833 0.00 0.00 35.77 3.51
567 569 2.165641 AGACGTTCGGTAGATTGCATCA 59.834 45.455 0.00 0.00 0.00 3.07
583 585 3.514706 TCAGTAGAGTAGACAGGAGACGT 59.485 47.826 0.00 0.00 0.00 4.34
593 595 5.454966 TGCCCATGTATTCAGTAGAGTAGA 58.545 41.667 0.00 0.00 0.00 2.59
594 596 5.536538 TCTGCCCATGTATTCAGTAGAGTAG 59.463 44.000 0.00 0.00 0.00 2.57
595 597 5.454966 TCTGCCCATGTATTCAGTAGAGTA 58.545 41.667 0.00 0.00 0.00 2.59
596 598 4.290093 TCTGCCCATGTATTCAGTAGAGT 58.710 43.478 0.00 0.00 0.00 3.24
597 599 4.343526 ACTCTGCCCATGTATTCAGTAGAG 59.656 45.833 0.00 0.00 36.22 2.43
626 628 4.655647 CTGCTGCACTGCTGGGGT 62.656 66.667 0.00 0.00 0.00 4.95
653 655 3.136123 GCACCATGCCACGATGCT 61.136 61.111 0.00 0.00 37.42 3.79
708 710 9.974750 GTTCTTAGTCTCAATAATTTAGTGCAC 57.025 33.333 9.40 9.40 0.00 4.57
723 725 7.772332 TTCAGTTTGTTCAGTTCTTAGTCTC 57.228 36.000 0.00 0.00 0.00 3.36
890 921 5.258051 GTTTATGTGGATGTAAAGGTGGGA 58.742 41.667 0.00 0.00 0.00 4.37
1025 1082 3.714871 GAGTGCTCTCAGGAGGCGC 62.715 68.421 10.86 0.00 40.18 6.53
1086 1143 2.125512 GGAGCGTCGACATGGCTT 60.126 61.111 17.16 1.39 37.10 4.35
1116 1173 5.308825 AGAAGGTACAAAAGATCCACACTG 58.691 41.667 0.00 0.00 0.00 3.66
1202 1263 1.280982 CTCGTCGTAACTGCATGCAT 58.719 50.000 22.97 10.26 0.00 3.96
1507 1568 0.545309 TGTTGGTGGAGAGGGAGAGG 60.545 60.000 0.00 0.00 0.00 3.69
1621 1685 6.951778 AGTTGTGGCCCAGTTATTAATTAAGT 59.048 34.615 0.00 0.00 0.00 2.24
1670 1734 0.535797 GGGGGTCCGTAGAAGAACTG 59.464 60.000 0.00 0.00 0.00 3.16
1742 1811 1.344065 TCCCTGTTTTGAGGTAGCGA 58.656 50.000 0.00 0.00 0.00 4.93
1744 1813 2.755103 CCAATCCCTGTTTTGAGGTAGC 59.245 50.000 0.00 0.00 0.00 3.58
1749 1818 2.517959 TCTGCCAATCCCTGTTTTGAG 58.482 47.619 0.00 0.00 0.00 3.02
1750 1819 2.673775 TCTGCCAATCCCTGTTTTGA 57.326 45.000 0.00 0.00 0.00 2.69
1770 1839 1.689273 GGCAACCATTGTAAACCACCA 59.311 47.619 0.00 0.00 0.00 4.17
1771 1840 2.448926 GGCAACCATTGTAAACCACC 57.551 50.000 0.00 0.00 0.00 4.61
1785 1854 2.914695 TATATACACCACGGGGCAAC 57.085 50.000 1.73 0.00 37.90 4.17
1786 1855 3.136809 ACATTATATACACCACGGGGCAA 59.863 43.478 1.73 0.00 37.90 4.52
1787 1856 2.706723 ACATTATATACACCACGGGGCA 59.293 45.455 1.73 0.00 37.90 5.36
1788 1857 3.244284 TGACATTATATACACCACGGGGC 60.244 47.826 1.73 0.00 37.90 5.80
1789 1858 4.312443 GTGACATTATATACACCACGGGG 58.688 47.826 0.00 0.00 41.29 5.73
1813 1882 7.968405 GCGTCTGAAATTACAAAAATATCCACT 59.032 33.333 0.00 0.00 0.00 4.00
1814 1883 7.220108 GGCGTCTGAAATTACAAAAATATCCAC 59.780 37.037 0.00 0.00 0.00 4.02
1947 2018 8.612619 CGTGATTAAGGAAGTAATATTGTTGCT 58.387 33.333 0.00 0.00 0.00 3.91
1988 2062 5.836024 AGTCCCACTATGTTGTTAAGGAA 57.164 39.130 0.00 0.00 0.00 3.36
1990 2064 6.894339 AAAAGTCCCACTATGTTGTTAAGG 57.106 37.500 0.00 0.00 0.00 2.69
2031 2106 3.104512 ACCCTCGGTTATTGATGTCAGA 58.895 45.455 0.00 0.00 27.29 3.27
2059 2134 1.724973 GCCGCTGCGTAGTTCTTTTTC 60.725 52.381 21.59 0.00 0.00 2.29
2060 2135 0.237498 GCCGCTGCGTAGTTCTTTTT 59.763 50.000 21.59 0.00 0.00 1.94
2076 2154 3.369400 TTTGGTCCGCCATTGCCG 61.369 61.111 0.00 0.00 45.56 5.69
2143 2221 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2144 2222 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2145 2223 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2146 2224 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2147 2225 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2148 2226 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2149 2227 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2150 2228 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2151 2229 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2152 2230 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2153 2231 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2154 2232 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2155 2233 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2156 2234 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2157 2235 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2158 2236 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2159 2237 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2160 2238 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2161 2239 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2162 2240 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2163 2241 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2164 2242 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2165 2243 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2166 2244 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2167 2245 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2168 2246 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2169 2247 0.179227 CGTGTGTGTGTGTGTGTGTG 60.179 55.000 0.00 0.00 0.00 3.82
2170 2248 0.601576 ACGTGTGTGTGTGTGTGTGT 60.602 50.000 0.00 0.00 0.00 3.72
2171 2249 0.179227 CACGTGTGTGTGTGTGTGTG 60.179 55.000 7.58 0.00 41.34 3.82
2172 2250 0.319986 TCACGTGTGTGTGTGTGTGT 60.320 50.000 16.51 0.00 46.49 3.72
2218 2296 2.490328 TTTGCTTCTTCAAACGCCAG 57.510 45.000 0.00 0.00 31.64 4.85
2359 2439 6.594788 TGAGATTTTCAATTCTTGGGAAGG 57.405 37.500 0.00 0.00 34.70 3.46
2389 2469 5.688176 GGAGATTGACAATAGTAACGAGAGC 59.312 44.000 0.00 0.00 0.00 4.09
2401 2481 6.488006 CCGATAATGGAAAGGAGATTGACAAT 59.512 38.462 0.00 0.00 0.00 2.71
2428 2508 3.006537 CCTCAAAGTTTCCGTCACTAGGA 59.993 47.826 0.00 0.00 35.69 2.94
2546 2626 1.073722 CTCCCAGCAGCACCTTGAA 59.926 57.895 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.