Multiple sequence alignment - TraesCS3D01G419900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G419900 chr3D 100.000 3196 0 0 1 3196 532206849 532203654 0.000000e+00 5903.0
1 TraesCS3D01G419900 chr3D 89.695 262 7 4 2020 2261 532199223 532198962 1.850000e-82 316.0
2 TraesCS3D01G419900 chr3D 90.476 231 19 2 2555 2784 532198641 532198413 5.180000e-78 302.0
3 TraesCS3D01G419900 chr3A 94.056 1430 50 14 957 2360 667495355 667493935 0.000000e+00 2137.0
4 TraesCS3D01G419900 chr3A 84.884 172 20 4 577 746 667495602 667495435 5.480000e-38 169.0
5 TraesCS3D01G419900 chr3A 92.553 94 2 2 828 921 667495441 667495353 2.590000e-26 130.0
6 TraesCS3D01G419900 chr3B 93.644 1180 54 4 965 2127 704479317 704478142 0.000000e+00 1744.0
7 TraesCS3D01G419900 chr3B 93.254 756 31 7 577 1331 704409289 704408553 0.000000e+00 1096.0
8 TraesCS3D01G419900 chr3B 97.064 579 16 1 1549 2127 704406974 704406397 0.000000e+00 974.0
9 TraesCS3D01G419900 chr3B 88.316 582 60 7 2 578 191139497 191138919 0.000000e+00 691.0
10 TraesCS3D01G419900 chr3B 86.589 343 20 9 2123 2450 704406357 704406026 3.920000e-94 355.0
11 TraesCS3D01G419900 chr3B 86.081 273 24 10 2186 2450 704466052 704465786 6.750000e-72 281.0
12 TraesCS3D01G419900 chr3B 80.878 319 38 9 2466 2784 704406036 704405741 2.480000e-56 230.0
13 TraesCS3D01G419900 chr3B 96.104 77 3 0 898 974 704559987 704559911 3.350000e-25 126.0
14 TraesCS3D01G419900 chr2B 88.715 1276 96 21 873 2107 793506414 793505146 0.000000e+00 1515.0
15 TraesCS3D01G419900 chr2B 83.915 945 116 19 1157 2073 793518120 793517184 0.000000e+00 870.0
16 TraesCS3D01G419900 chr2B 77.378 946 160 28 1160 2074 793446972 793446050 2.200000e-141 512.0
17 TraesCS3D01G419900 chr2A 88.031 1270 102 26 883 2118 768267206 768265953 0.000000e+00 1458.0
18 TraesCS3D01G419900 chr2A 81.732 1155 150 31 957 2073 768256844 768257975 0.000000e+00 907.0
19 TraesCS3D01G419900 chr2A 89.153 590 56 6 2 585 585984209 585984796 0.000000e+00 728.0
20 TraesCS3D01G419900 chr2A 77.872 940 166 27 1160 2074 768306703 768305781 2.170000e-151 545.0
21 TraesCS3D01G419900 chr2D 87.643 1222 101 22 877 2073 643434978 643436174 0.000000e+00 1375.0
22 TraesCS3D01G419900 chr2D 84.421 950 117 11 1154 2073 643330398 643331346 0.000000e+00 905.0
23 TraesCS3D01G419900 chr2D 89.845 581 50 5 2 577 109741808 109741232 0.000000e+00 737.0
24 TraesCS3D01G419900 chr2D 88.296 581 56 9 8 580 329144786 329144210 0.000000e+00 686.0
25 TraesCS3D01G419900 chr2D 87.863 585 64 5 2 581 398456039 398455457 0.000000e+00 680.0
26 TraesCS3D01G419900 chr2D 95.093 428 15 2 2775 3196 627124044 627123617 0.000000e+00 669.0
27 TraesCS3D01G419900 chr2D 77.778 918 159 23 1160 2049 643640466 643641366 1.020000e-144 523.0
28 TraesCS3D01G419900 chr2D 77.124 918 165 28 1160 2049 643468533 643467633 1.030000e-134 490.0
29 TraesCS3D01G419900 chr2D 77.778 144 26 6 1159 1299 643901181 643901321 2.040000e-12 84.2
30 TraesCS3D01G419900 chr2D 76.282 156 31 6 1162 1314 644016477 644016629 9.510000e-11 78.7
31 TraesCS3D01G419900 chr7D 89.501 581 54 7 2 578 38739544 38740121 0.000000e+00 728.0
32 TraesCS3D01G419900 chr7D 88.156 591 55 6 2 580 133237730 133237143 0.000000e+00 689.0
33 TraesCS3D01G419900 chr7D 95.962 421 12 1 2781 3196 550610046 550609626 0.000000e+00 678.0
34 TraesCS3D01G419900 chr7D 95.943 419 12 1 2783 3196 435508781 435508363 0.000000e+00 675.0
35 TraesCS3D01G419900 chr7D 95.316 427 13 3 2775 3196 635573003 635573427 0.000000e+00 671.0
36 TraesCS3D01G419900 chr6D 96.429 420 12 2 2780 3196 49875315 49874896 0.000000e+00 689.0
37 TraesCS3D01G419900 chr6D 95.093 428 15 2 2774 3196 437151884 437152310 0.000000e+00 669.0
38 TraesCS3D01G419900 chr4D 96.651 418 9 1 2784 3196 442398967 442399384 0.000000e+00 689.0
39 TraesCS3D01G419900 chr4D 96.163 417 11 1 2783 3194 274551311 274551727 0.000000e+00 676.0
40 TraesCS3D01G419900 chr5A 88.176 592 51 15 2 581 94291425 94290841 0.000000e+00 688.0
41 TraesCS3D01G419900 chr6A 87.993 583 64 5 4 581 74669613 74669032 0.000000e+00 684.0
42 TraesCS3D01G419900 chr1D 95.694 418 12 2 2784 3196 495272672 495272256 0.000000e+00 667.0
43 TraesCS3D01G419900 chr5D 83.636 110 9 7 577 682 555073103 555072999 9.440000e-16 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G419900 chr3D 532203654 532206849 3195 True 5903.00 5903 100.000000 1 3196 1 chr3D.!!$R1 3195
1 TraesCS3D01G419900 chr3D 532198413 532199223 810 True 309.00 316 90.085500 2020 2784 2 chr3D.!!$R2 764
2 TraesCS3D01G419900 chr3A 667493935 667495602 1667 True 812.00 2137 90.497667 577 2360 3 chr3A.!!$R1 1783
3 TraesCS3D01G419900 chr3B 704478142 704479317 1175 True 1744.00 1744 93.644000 965 2127 1 chr3B.!!$R3 1162
4 TraesCS3D01G419900 chr3B 191138919 191139497 578 True 691.00 691 88.316000 2 578 1 chr3B.!!$R1 576
5 TraesCS3D01G419900 chr3B 704405741 704409289 3548 True 663.75 1096 89.446250 577 2784 4 chr3B.!!$R5 2207
6 TraesCS3D01G419900 chr2B 793505146 793506414 1268 True 1515.00 1515 88.715000 873 2107 1 chr2B.!!$R2 1234
7 TraesCS3D01G419900 chr2B 793517184 793518120 936 True 870.00 870 83.915000 1157 2073 1 chr2B.!!$R3 916
8 TraesCS3D01G419900 chr2B 793446050 793446972 922 True 512.00 512 77.378000 1160 2074 1 chr2B.!!$R1 914
9 TraesCS3D01G419900 chr2A 768265953 768267206 1253 True 1458.00 1458 88.031000 883 2118 1 chr2A.!!$R1 1235
10 TraesCS3D01G419900 chr2A 768256844 768257975 1131 False 907.00 907 81.732000 957 2073 1 chr2A.!!$F2 1116
11 TraesCS3D01G419900 chr2A 585984209 585984796 587 False 728.00 728 89.153000 2 585 1 chr2A.!!$F1 583
12 TraesCS3D01G419900 chr2A 768305781 768306703 922 True 545.00 545 77.872000 1160 2074 1 chr2A.!!$R2 914
13 TraesCS3D01G419900 chr2D 643434978 643436174 1196 False 1375.00 1375 87.643000 877 2073 1 chr2D.!!$F2 1196
14 TraesCS3D01G419900 chr2D 643330398 643331346 948 False 905.00 905 84.421000 1154 2073 1 chr2D.!!$F1 919
15 TraesCS3D01G419900 chr2D 109741232 109741808 576 True 737.00 737 89.845000 2 577 1 chr2D.!!$R1 575
16 TraesCS3D01G419900 chr2D 329144210 329144786 576 True 686.00 686 88.296000 8 580 1 chr2D.!!$R2 572
17 TraesCS3D01G419900 chr2D 398455457 398456039 582 True 680.00 680 87.863000 2 581 1 chr2D.!!$R3 579
18 TraesCS3D01G419900 chr2D 643640466 643641366 900 False 523.00 523 77.778000 1160 2049 1 chr2D.!!$F3 889
19 TraesCS3D01G419900 chr2D 643467633 643468533 900 True 490.00 490 77.124000 1160 2049 1 chr2D.!!$R5 889
20 TraesCS3D01G419900 chr7D 38739544 38740121 577 False 728.00 728 89.501000 2 578 1 chr7D.!!$F1 576
21 TraesCS3D01G419900 chr7D 133237143 133237730 587 True 689.00 689 88.156000 2 580 1 chr7D.!!$R1 578
22 TraesCS3D01G419900 chr5A 94290841 94291425 584 True 688.00 688 88.176000 2 581 1 chr5A.!!$R1 579
23 TraesCS3D01G419900 chr6A 74669032 74669613 581 True 684.00 684 87.993000 4 581 1 chr6A.!!$R1 577

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
695 716 0.17576 TGCTCTATCCACTTGACCGC 59.824 55.0 0.0 0.0 0.0 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2533 4198 0.179001 CGTTTGAGGACAACCCCCTT 60.179 55.0 0.0 0.0 35.63 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
76 79 1.887707 GTAAAGATGAGCGCCCGGG 60.888 63.158 19.09 19.09 0.00 5.73
116 119 4.202020 GGGTTTCAGTTTCAAGGTGAGAAC 60.202 45.833 0.00 0.00 0.00 3.01
120 123 3.869246 TCAGTTTCAAGGTGAGAACGTTC 59.131 43.478 20.71 20.71 0.00 3.95
179 182 6.891361 AGTTCACCCAATTTCATCATGACATA 59.109 34.615 0.00 0.00 0.00 2.29
205 208 1.327303 TGGGAAACTCATGTGCAACC 58.673 50.000 0.00 0.00 34.36 3.77
224 227 4.065321 ACCGCAAAATGATTTGGTTGAA 57.935 36.364 0.00 0.00 44.93 2.69
232 235 8.505625 GCAAAATGATTTGGTTGAACATATGTT 58.494 29.630 20.93 20.93 44.93 2.71
279 282 6.260870 TGTATTTTCTTTATTCGGCTTGCA 57.739 33.333 0.00 0.00 0.00 4.08
494 510 3.161866 GACCCAAATCTAAAACAGGGCA 58.838 45.455 0.00 0.00 39.97 5.36
499 515 3.418684 AATCTAAAACAGGGCAGACGT 57.581 42.857 0.00 0.00 0.00 4.34
598 615 0.963355 AGCGGCGAAAATTGGGCTTA 60.963 50.000 12.98 0.00 0.00 3.09
660 681 2.531326 GGGTTTGAGGGGCCCTTT 59.469 61.111 29.49 10.88 39.31 3.11
661 682 1.913262 GGGTTTGAGGGGCCCTTTG 60.913 63.158 29.49 0.00 39.31 2.77
662 683 1.913262 GGTTTGAGGGGCCCTTTGG 60.913 63.158 29.49 0.00 31.76 3.28
683 704 2.324541 GGGTGAGTGGAGATGCTCTAT 58.675 52.381 0.00 0.00 33.22 1.98
695 716 0.175760 TGCTCTATCCACTTGACCGC 59.824 55.000 0.00 0.00 0.00 5.68
697 718 0.456221 CTCTATCCACTTGACCGCGT 59.544 55.000 4.92 0.00 0.00 6.01
813 835 3.257375 TCCTACACAATGCTAACTCACGT 59.743 43.478 0.00 0.00 0.00 4.49
875 897 8.635877 AGATTTATTACAGCTAACAGACGAAG 57.364 34.615 0.00 0.00 0.00 3.79
1057 1110 0.109781 CAAAGAAACCATGGCGACGG 60.110 55.000 13.04 0.00 0.00 4.79
1535 3032 0.321996 GTCACAGGAGAAGGTGTCCC 59.678 60.000 0.00 0.00 36.43 4.46
2188 3758 7.112122 TGGTTCATGTAGCAATAAAGAGACAT 58.888 34.615 1.35 0.00 0.00 3.06
2208 3786 0.388649 AGCTTTCGATCGTCGTTGCT 60.389 50.000 15.94 14.83 41.35 3.91
2290 3881 4.416505 AGTACTAGTAAGCGTGTGTGAC 57.583 45.455 3.61 0.00 0.00 3.67
2291 3882 4.070716 AGTACTAGTAAGCGTGTGTGACT 58.929 43.478 3.61 0.00 0.00 3.41
2294 3885 1.852942 AGTAAGCGTGTGTGACTGTG 58.147 50.000 0.00 0.00 0.00 3.66
2295 3886 1.136305 AGTAAGCGTGTGTGACTGTGT 59.864 47.619 0.00 0.00 0.00 3.72
2297 3888 0.108377 AAGCGTGTGTGACTGTGTGA 60.108 50.000 0.00 0.00 0.00 3.58
2298 3889 0.528466 AGCGTGTGTGACTGTGTGAG 60.528 55.000 0.00 0.00 0.00 3.51
2299 3890 0.806102 GCGTGTGTGACTGTGTGAGT 60.806 55.000 0.00 0.00 37.76 3.41
2301 3892 1.735700 CGTGTGTGACTGTGTGAGTGT 60.736 52.381 0.00 0.00 33.83 3.55
2302 3893 2.478879 CGTGTGTGACTGTGTGAGTGTA 60.479 50.000 0.00 0.00 33.83 2.90
2303 3894 3.517602 GTGTGTGACTGTGTGAGTGTAA 58.482 45.455 0.00 0.00 33.83 2.41
2304 3895 3.551890 GTGTGTGACTGTGTGAGTGTAAG 59.448 47.826 0.00 0.00 33.83 2.34
2305 3896 3.123804 GTGTGACTGTGTGAGTGTAAGG 58.876 50.000 0.00 0.00 33.83 2.69
2308 3899 2.169561 TGACTGTGTGAGTGTAAGGCAA 59.830 45.455 0.00 0.00 33.83 4.52
2309 3900 3.202906 GACTGTGTGAGTGTAAGGCAAA 58.797 45.455 0.00 0.00 33.83 3.68
2310 3901 3.206150 ACTGTGTGAGTGTAAGGCAAAG 58.794 45.455 0.00 0.00 31.75 2.77
2311 3902 2.549754 CTGTGTGAGTGTAAGGCAAAGG 59.450 50.000 0.00 0.00 0.00 3.11
2312 3903 2.092646 TGTGTGAGTGTAAGGCAAAGGT 60.093 45.455 0.00 0.00 0.00 3.50
2314 3905 2.171659 TGTGAGTGTAAGGCAAAGGTGA 59.828 45.455 0.00 0.00 0.00 4.02
2378 3969 6.839124 TTCTTCTGGGTTCGTGTAGTAATA 57.161 37.500 0.00 0.00 0.00 0.98
2384 3975 5.969423 TGGGTTCGTGTAGTAATAAAGAGG 58.031 41.667 0.00 0.00 0.00 3.69
2400 4060 1.860240 AGAGGGACCTCATACCTAGCA 59.140 52.381 19.79 0.00 44.99 3.49
2417 4077 1.838568 GCAAACGTTCGTCAGGGGAC 61.839 60.000 0.00 0.00 40.77 4.46
2450 4110 1.285641 CGGTCGCATGGCAGTTTTT 59.714 52.632 0.00 0.00 0.00 1.94
2530 4195 0.805322 CAGGCGACATGTCTCTCTGC 60.805 60.000 22.95 17.39 0.00 4.26
2531 4196 1.520342 GGCGACATGTCTCTCTGCC 60.520 63.158 22.95 21.92 0.00 4.85
2532 4197 1.216444 GCGACATGTCTCTCTGCCA 59.784 57.895 22.95 0.00 0.00 4.92
2533 4198 0.390340 GCGACATGTCTCTCTGCCAA 60.390 55.000 22.95 0.00 0.00 4.52
2534 4199 1.941209 GCGACATGTCTCTCTGCCAAA 60.941 52.381 22.95 0.00 0.00 3.28
2535 4200 1.998315 CGACATGTCTCTCTGCCAAAG 59.002 52.381 22.95 0.00 0.00 2.77
2536 4201 2.354259 GACATGTCTCTCTGCCAAAGG 58.646 52.381 18.83 0.00 0.00 3.11
2537 4202 1.004044 ACATGTCTCTCTGCCAAAGGG 59.996 52.381 0.00 0.00 37.18 3.95
2538 4203 0.622665 ATGTCTCTCTGCCAAAGGGG 59.377 55.000 0.00 0.00 40.85 4.79
2539 4204 1.301293 GTCTCTCTGCCAAAGGGGG 59.699 63.158 0.00 0.00 37.04 5.40
2540 4205 1.151810 TCTCTCTGCCAAAGGGGGT 60.152 57.895 0.00 0.00 37.04 4.95
2541 4206 0.772124 TCTCTCTGCCAAAGGGGGTT 60.772 55.000 0.00 0.00 37.04 4.11
2542 4207 0.610232 CTCTCTGCCAAAGGGGGTTG 60.610 60.000 0.00 0.00 37.04 3.77
2543 4208 1.153756 CTCTGCCAAAGGGGGTTGT 59.846 57.895 0.00 0.00 37.04 3.32
2544 4209 0.895559 CTCTGCCAAAGGGGGTTGTC 60.896 60.000 0.00 0.00 37.04 3.18
2545 4210 1.908299 CTGCCAAAGGGGGTTGTCC 60.908 63.158 0.00 0.00 37.04 4.02
2546 4211 2.371897 CTGCCAAAGGGGGTTGTCCT 62.372 60.000 0.00 0.00 37.04 3.85
2547 4212 1.606601 GCCAAAGGGGGTTGTCCTC 60.607 63.158 0.00 0.00 37.04 3.71
2548 4213 1.850549 CCAAAGGGGGTTGTCCTCA 59.149 57.895 0.00 0.00 38.95 3.86
2549 4214 0.187361 CCAAAGGGGGTTGTCCTCAA 59.813 55.000 0.00 0.00 38.95 3.02
2550 4215 1.412361 CCAAAGGGGGTTGTCCTCAAA 60.412 52.381 0.00 0.00 38.95 2.69
2551 4216 1.686587 CAAAGGGGGTTGTCCTCAAAC 59.313 52.381 0.00 0.00 38.95 2.93
2552 4217 0.179001 AAGGGGGTTGTCCTCAAACG 60.179 55.000 0.00 0.00 41.71 3.60
2553 4218 1.149854 GGGGGTTGTCCTCAAACGT 59.850 57.895 0.00 0.00 41.71 3.99
2557 4222 1.332686 GGGTTGTCCTCAAACGTGAAC 59.667 52.381 0.00 0.00 41.71 3.18
2566 4231 3.549873 CCTCAAACGTGAACGCAATTTTT 59.450 39.130 2.11 0.00 44.43 1.94
2569 4234 3.898005 AACGTGAACGCAATTTTTGTG 57.102 38.095 2.11 0.00 46.24 3.33
2615 4281 5.164606 TCTCGTTTTTCCACTAAAACTGC 57.835 39.130 9.46 0.00 42.84 4.40
2672 4338 4.974275 CGAACGTTCGTCATCTACCATTAT 59.026 41.667 35.92 0.00 45.09 1.28
2674 4340 5.509716 ACGTTCGTCATCTACCATTATCA 57.490 39.130 0.00 0.00 0.00 2.15
2693 4359 7.730364 TTATCAACAAAGAGACTGAGTTTCC 57.270 36.000 0.00 0.00 0.00 3.13
2703 4369 5.245075 AGAGACTGAGTTTCCTTCTACCAAG 59.755 44.000 0.00 0.00 0.00 3.61
2753 4420 3.990469 GACAGAGCTTTCGAGTTTCATCA 59.010 43.478 0.00 0.00 0.00 3.07
2767 4434 4.093998 AGTTTCATCATTGCATCTGACGAC 59.906 41.667 1.90 0.00 0.00 4.34
2784 4451 1.264020 CGACCCATGTTGTGTGTTCTG 59.736 52.381 0.00 0.00 0.00 3.02
2785 4452 2.297701 GACCCATGTTGTGTGTTCTGT 58.702 47.619 0.00 0.00 0.00 3.41
2786 4453 2.687935 GACCCATGTTGTGTGTTCTGTT 59.312 45.455 0.00 0.00 0.00 3.16
2787 4454 3.880490 GACCCATGTTGTGTGTTCTGTTA 59.120 43.478 0.00 0.00 0.00 2.41
2788 4455 3.882888 ACCCATGTTGTGTGTTCTGTTAG 59.117 43.478 0.00 0.00 0.00 2.34
2789 4456 3.253188 CCCATGTTGTGTGTTCTGTTAGG 59.747 47.826 0.00 0.00 0.00 2.69
2790 4457 3.253188 CCATGTTGTGTGTTCTGTTAGGG 59.747 47.826 0.00 0.00 0.00 3.53
2791 4458 3.637911 TGTTGTGTGTTCTGTTAGGGT 57.362 42.857 0.00 0.00 0.00 4.34
2792 4459 4.757019 TGTTGTGTGTTCTGTTAGGGTA 57.243 40.909 0.00 0.00 0.00 3.69
2793 4460 4.699637 TGTTGTGTGTTCTGTTAGGGTAG 58.300 43.478 0.00 0.00 0.00 3.18
2794 4461 4.162698 TGTTGTGTGTTCTGTTAGGGTAGT 59.837 41.667 0.00 0.00 0.00 2.73
2795 4462 4.595762 TGTGTGTTCTGTTAGGGTAGTC 57.404 45.455 0.00 0.00 0.00 2.59
2796 4463 3.962063 TGTGTGTTCTGTTAGGGTAGTCA 59.038 43.478 0.00 0.00 0.00 3.41
2797 4464 4.591498 TGTGTGTTCTGTTAGGGTAGTCAT 59.409 41.667 0.00 0.00 0.00 3.06
2798 4465 5.071250 TGTGTGTTCTGTTAGGGTAGTCATT 59.929 40.000 0.00 0.00 0.00 2.57
2799 4466 6.268158 TGTGTGTTCTGTTAGGGTAGTCATTA 59.732 38.462 0.00 0.00 0.00 1.90
2800 4467 7.038587 TGTGTGTTCTGTTAGGGTAGTCATTAT 60.039 37.037 0.00 0.00 0.00 1.28
2801 4468 7.277981 GTGTGTTCTGTTAGGGTAGTCATTATG 59.722 40.741 0.00 0.00 0.00 1.90
2802 4469 6.761714 GTGTTCTGTTAGGGTAGTCATTATGG 59.238 42.308 0.00 0.00 0.00 2.74
2803 4470 6.442564 TGTTCTGTTAGGGTAGTCATTATGGT 59.557 38.462 0.00 0.00 0.00 3.55
2804 4471 7.620491 TGTTCTGTTAGGGTAGTCATTATGGTA 59.380 37.037 0.00 0.00 0.00 3.25
2805 4472 8.648693 GTTCTGTTAGGGTAGTCATTATGGTAT 58.351 37.037 0.00 0.00 0.00 2.73
2806 4473 9.886337 TTCTGTTAGGGTAGTCATTATGGTATA 57.114 33.333 0.00 0.00 0.00 1.47
2807 4474 9.305555 TCTGTTAGGGTAGTCATTATGGTATAC 57.694 37.037 0.00 0.00 0.00 1.47
2808 4475 8.114331 TGTTAGGGTAGTCATTATGGTATACG 57.886 38.462 0.00 0.00 0.00 3.06
2809 4476 7.725397 TGTTAGGGTAGTCATTATGGTATACGT 59.275 37.037 0.00 0.00 0.00 3.57
2810 4477 9.231297 GTTAGGGTAGTCATTATGGTATACGTA 57.769 37.037 0.00 0.00 0.00 3.57
2811 4478 7.934855 AGGGTAGTCATTATGGTATACGTAG 57.065 40.000 0.08 0.00 0.00 3.51
2813 4480 7.609532 AGGGTAGTCATTATGGTATACGTAGTC 59.390 40.741 0.08 0.00 43.93 2.59
2814 4481 7.148171 GGGTAGTCATTATGGTATACGTAGTCC 60.148 44.444 0.08 6.65 43.93 3.85
2815 4482 7.391554 GGTAGTCATTATGGTATACGTAGTCCA 59.608 40.741 19.12 19.12 43.93 4.02
2816 4483 7.828508 AGTCATTATGGTATACGTAGTCCAA 57.171 36.000 20.20 9.53 43.93 3.53
2817 4484 7.883217 AGTCATTATGGTATACGTAGTCCAAG 58.117 38.462 20.20 12.91 43.93 3.61
2818 4485 7.504911 AGTCATTATGGTATACGTAGTCCAAGT 59.495 37.037 20.20 11.00 43.93 3.16
2819 4486 7.806960 GTCATTATGGTATACGTAGTCCAAGTC 59.193 40.741 20.20 9.03 43.93 3.01
2820 4487 7.503230 TCATTATGGTATACGTAGTCCAAGTCA 59.497 37.037 20.20 9.09 43.93 3.41
2821 4488 5.769484 ATGGTATACGTAGTCCAAGTCAG 57.231 43.478 20.20 0.00 43.93 3.51
2822 4489 4.592942 TGGTATACGTAGTCCAAGTCAGT 58.407 43.478 15.94 0.00 43.93 3.41
2823 4490 5.012239 TGGTATACGTAGTCCAAGTCAGTT 58.988 41.667 15.94 0.00 43.93 3.16
2824 4491 5.477984 TGGTATACGTAGTCCAAGTCAGTTT 59.522 40.000 15.94 0.00 43.93 2.66
2825 4492 6.015180 TGGTATACGTAGTCCAAGTCAGTTTT 60.015 38.462 15.94 0.00 43.93 2.43
2826 4493 6.309737 GGTATACGTAGTCCAAGTCAGTTTTG 59.690 42.308 0.08 0.00 43.93 2.44
2827 4494 4.133013 ACGTAGTCCAAGTCAGTTTTGT 57.867 40.909 0.00 0.00 29.74 2.83
2828 4495 5.266733 ACGTAGTCCAAGTCAGTTTTGTA 57.733 39.130 0.00 0.00 29.74 2.41
2829 4496 5.045872 ACGTAGTCCAAGTCAGTTTTGTAC 58.954 41.667 0.00 0.00 29.74 2.90
2830 4497 4.446719 CGTAGTCCAAGTCAGTTTTGTACC 59.553 45.833 0.00 0.00 0.00 3.34
2831 4498 3.816994 AGTCCAAGTCAGTTTTGTACCC 58.183 45.455 0.00 0.00 0.00 3.69
2832 4499 2.882761 GTCCAAGTCAGTTTTGTACCCC 59.117 50.000 0.00 0.00 0.00 4.95
2833 4500 2.781174 TCCAAGTCAGTTTTGTACCCCT 59.219 45.455 0.00 0.00 0.00 4.79
2834 4501 3.975312 TCCAAGTCAGTTTTGTACCCCTA 59.025 43.478 0.00 0.00 0.00 3.53
2835 4502 4.600111 TCCAAGTCAGTTTTGTACCCCTAT 59.400 41.667 0.00 0.00 0.00 2.57
2836 4503 4.941873 CCAAGTCAGTTTTGTACCCCTATC 59.058 45.833 0.00 0.00 0.00 2.08
2837 4504 4.838904 AGTCAGTTTTGTACCCCTATCC 57.161 45.455 0.00 0.00 0.00 2.59
2838 4505 4.436079 AGTCAGTTTTGTACCCCTATCCT 58.564 43.478 0.00 0.00 0.00 3.24
2839 4506 5.596763 AGTCAGTTTTGTACCCCTATCCTA 58.403 41.667 0.00 0.00 0.00 2.94
2840 4507 6.027482 AGTCAGTTTTGTACCCCTATCCTAA 58.973 40.000 0.00 0.00 0.00 2.69
2841 4508 6.156429 AGTCAGTTTTGTACCCCTATCCTAAG 59.844 42.308 0.00 0.00 0.00 2.18
2842 4509 6.027482 TCAGTTTTGTACCCCTATCCTAAGT 58.973 40.000 0.00 0.00 0.00 2.24
2843 4510 6.155737 TCAGTTTTGTACCCCTATCCTAAGTC 59.844 42.308 0.00 0.00 0.00 3.01
2844 4511 5.128335 AGTTTTGTACCCCTATCCTAAGTCG 59.872 44.000 0.00 0.00 0.00 4.18
2845 4512 3.234234 TGTACCCCTATCCTAAGTCGG 57.766 52.381 0.00 0.00 0.00 4.79
2846 4513 2.515429 TGTACCCCTATCCTAAGTCGGT 59.485 50.000 0.00 0.00 0.00 4.69
2847 4514 2.862850 ACCCCTATCCTAAGTCGGTT 57.137 50.000 0.00 0.00 0.00 4.44
2848 4515 3.126323 ACCCCTATCCTAAGTCGGTTT 57.874 47.619 0.00 0.00 0.00 3.27
2849 4516 4.270317 ACCCCTATCCTAAGTCGGTTTA 57.730 45.455 0.00 0.00 0.00 2.01
2850 4517 4.824276 ACCCCTATCCTAAGTCGGTTTAT 58.176 43.478 0.00 0.00 0.00 1.40
2851 4518 5.969086 ACCCCTATCCTAAGTCGGTTTATA 58.031 41.667 0.00 0.00 0.00 0.98
2852 4519 6.568795 ACCCCTATCCTAAGTCGGTTTATAT 58.431 40.000 0.00 0.00 0.00 0.86
2853 4520 6.666980 ACCCCTATCCTAAGTCGGTTTATATC 59.333 42.308 0.00 0.00 0.00 1.63
2854 4521 6.097981 CCCCTATCCTAAGTCGGTTTATATCC 59.902 46.154 0.00 0.00 0.00 2.59
2855 4522 6.896307 CCCTATCCTAAGTCGGTTTATATCCT 59.104 42.308 0.00 0.00 0.00 3.24
2856 4523 7.068470 CCCTATCCTAAGTCGGTTTATATCCTC 59.932 44.444 0.00 0.00 0.00 3.71
2857 4524 7.835181 CCTATCCTAAGTCGGTTTATATCCTCT 59.165 40.741 0.00 0.00 0.00 3.69
2858 4525 9.245481 CTATCCTAAGTCGGTTTATATCCTCTT 57.755 37.037 0.00 0.00 0.00 2.85
2860 4527 9.771140 ATCCTAAGTCGGTTTATATCCTCTTAT 57.229 33.333 0.00 0.00 0.00 1.73
2876 4543 7.392494 TCCTCTTATATACTCTTGTATGCCG 57.608 40.000 0.00 0.00 39.49 5.69
2877 4544 6.946583 TCCTCTTATATACTCTTGTATGCCGT 59.053 38.462 0.00 0.00 39.49 5.68
2878 4545 8.105197 TCCTCTTATATACTCTTGTATGCCGTA 58.895 37.037 0.00 0.00 39.49 4.02
2879 4546 8.182881 CCTCTTATATACTCTTGTATGCCGTAC 58.817 40.741 0.00 0.00 39.49 3.67
2880 4547 8.048534 TCTTATATACTCTTGTATGCCGTACC 57.951 38.462 0.00 0.00 39.49 3.34
2881 4548 7.666804 TCTTATATACTCTTGTATGCCGTACCA 59.333 37.037 0.00 0.00 39.49 3.25
2882 4549 6.659745 ATATACTCTTGTATGCCGTACCAA 57.340 37.500 0.00 0.00 39.49 3.67
2883 4550 3.688694 ACTCTTGTATGCCGTACCAAA 57.311 42.857 0.00 0.00 32.03 3.28
2884 4551 4.216411 ACTCTTGTATGCCGTACCAAAT 57.784 40.909 0.00 0.00 32.03 2.32
2885 4552 4.189231 ACTCTTGTATGCCGTACCAAATC 58.811 43.478 0.00 0.00 32.03 2.17
2886 4553 4.188462 CTCTTGTATGCCGTACCAAATCA 58.812 43.478 0.00 0.00 32.03 2.57
2887 4554 4.776349 TCTTGTATGCCGTACCAAATCAT 58.224 39.130 0.00 0.00 32.03 2.45
2888 4555 4.814234 TCTTGTATGCCGTACCAAATCATC 59.186 41.667 0.00 0.00 32.03 2.92
2889 4556 4.143986 TGTATGCCGTACCAAATCATCA 57.856 40.909 0.00 0.00 32.03 3.07
2890 4557 4.518249 TGTATGCCGTACCAAATCATCAA 58.482 39.130 0.00 0.00 32.03 2.57
2891 4558 5.129634 TGTATGCCGTACCAAATCATCAAT 58.870 37.500 0.00 0.00 32.03 2.57
2892 4559 6.292150 TGTATGCCGTACCAAATCATCAATA 58.708 36.000 0.00 0.00 32.03 1.90
2893 4560 6.768381 TGTATGCCGTACCAAATCATCAATAA 59.232 34.615 0.00 0.00 32.03 1.40
2894 4561 5.749596 TGCCGTACCAAATCATCAATAAG 57.250 39.130 0.00 0.00 0.00 1.73
2895 4562 4.036262 TGCCGTACCAAATCATCAATAAGC 59.964 41.667 0.00 0.00 0.00 3.09
2896 4563 4.036262 GCCGTACCAAATCATCAATAAGCA 59.964 41.667 0.00 0.00 0.00 3.91
2897 4564 5.449862 GCCGTACCAAATCATCAATAAGCAA 60.450 40.000 0.00 0.00 0.00 3.91
2898 4565 5.971202 CCGTACCAAATCATCAATAAGCAAC 59.029 40.000 0.00 0.00 0.00 4.17
2899 4566 6.404184 CCGTACCAAATCATCAATAAGCAACA 60.404 38.462 0.00 0.00 0.00 3.33
2900 4567 6.688385 CGTACCAAATCATCAATAAGCAACAG 59.312 38.462 0.00 0.00 0.00 3.16
2901 4568 6.594788 ACCAAATCATCAATAAGCAACAGT 57.405 33.333 0.00 0.00 0.00 3.55
2902 4569 6.996509 ACCAAATCATCAATAAGCAACAGTT 58.003 32.000 0.00 0.00 0.00 3.16
2903 4570 7.444299 ACCAAATCATCAATAAGCAACAGTTT 58.556 30.769 0.00 0.00 0.00 2.66
2904 4571 7.933033 ACCAAATCATCAATAAGCAACAGTTTT 59.067 29.630 0.00 0.00 0.00 2.43
2905 4572 9.421806 CCAAATCATCAATAAGCAACAGTTTTA 57.578 29.630 0.00 0.00 0.00 1.52
2910 4577 9.844790 TCATCAATAAGCAACAGTTTTATTCAG 57.155 29.630 1.43 0.00 0.00 3.02
2911 4578 8.589629 CATCAATAAGCAACAGTTTTATTCAGC 58.410 33.333 1.43 0.00 0.00 4.26
2912 4579 7.885297 TCAATAAGCAACAGTTTTATTCAGCT 58.115 30.769 1.43 0.00 0.00 4.24
2913 4580 8.359642 TCAATAAGCAACAGTTTTATTCAGCTT 58.640 29.630 9.12 9.12 42.87 3.74
2914 4581 8.981647 CAATAAGCAACAGTTTTATTCAGCTTT 58.018 29.630 9.36 0.00 40.95 3.51
2915 4582 8.748380 ATAAGCAACAGTTTTATTCAGCTTTC 57.252 30.769 9.36 0.00 40.95 2.62
2916 4583 6.147864 AGCAACAGTTTTATTCAGCTTTCA 57.852 33.333 0.00 0.00 0.00 2.69
2917 4584 6.752168 AGCAACAGTTTTATTCAGCTTTCAT 58.248 32.000 0.00 0.00 0.00 2.57
2918 4585 6.643770 AGCAACAGTTTTATTCAGCTTTCATG 59.356 34.615 0.00 0.00 0.00 3.07
2919 4586 6.128742 GCAACAGTTTTATTCAGCTTTCATGG 60.129 38.462 0.00 0.00 0.00 3.66
2920 4587 6.655078 ACAGTTTTATTCAGCTTTCATGGT 57.345 33.333 0.00 0.00 0.00 3.55
2921 4588 7.759489 ACAGTTTTATTCAGCTTTCATGGTA 57.241 32.000 0.00 0.00 0.00 3.25
2922 4589 8.353423 ACAGTTTTATTCAGCTTTCATGGTAT 57.647 30.769 0.00 0.00 0.00 2.73
2923 4590 8.462016 ACAGTTTTATTCAGCTTTCATGGTATC 58.538 33.333 0.00 0.00 0.00 2.24
2924 4591 8.461222 CAGTTTTATTCAGCTTTCATGGTATCA 58.539 33.333 0.00 0.00 0.00 2.15
2925 4592 8.680903 AGTTTTATTCAGCTTTCATGGTATCAG 58.319 33.333 0.00 0.00 0.00 2.90
2926 4593 8.677300 GTTTTATTCAGCTTTCATGGTATCAGA 58.323 33.333 0.00 0.00 0.00 3.27
2927 4594 8.985315 TTTATTCAGCTTTCATGGTATCAGAT 57.015 30.769 0.00 0.00 0.00 2.90
2929 4596 7.976135 ATTCAGCTTTCATGGTATCAGATAC 57.024 36.000 11.71 11.71 35.00 2.24
2937 4604 2.005370 GGTATCAGATACCGGTCCCA 57.995 55.000 21.68 0.00 45.20 4.37
2938 4605 1.893801 GGTATCAGATACCGGTCCCAG 59.106 57.143 21.68 0.56 45.20 4.45
2939 4606 1.893801 GTATCAGATACCGGTCCCAGG 59.106 57.143 12.40 0.00 0.00 4.45
2940 4607 0.561184 ATCAGATACCGGTCCCAGGA 59.439 55.000 12.40 4.11 0.00 3.86
2941 4608 0.561184 TCAGATACCGGTCCCAGGAT 59.439 55.000 12.40 0.00 0.00 3.24
2942 4609 1.062428 TCAGATACCGGTCCCAGGATT 60.062 52.381 12.40 0.00 0.00 3.01
2943 4610 1.768870 CAGATACCGGTCCCAGGATTT 59.231 52.381 12.40 0.00 0.00 2.17
2944 4611 2.969950 CAGATACCGGTCCCAGGATTTA 59.030 50.000 12.40 0.00 0.00 1.40
2945 4612 3.006967 CAGATACCGGTCCCAGGATTTAG 59.993 52.174 12.40 0.00 0.00 1.85
2946 4613 1.797320 TACCGGTCCCAGGATTTAGG 58.203 55.000 12.40 0.00 0.00 2.69
2947 4614 0.986550 ACCGGTCCCAGGATTTAGGG 60.987 60.000 0.00 0.00 46.90 3.53
2948 4615 0.986550 CCGGTCCCAGGATTTAGGGT 60.987 60.000 0.00 0.00 45.64 4.34
2949 4616 1.693404 CCGGTCCCAGGATTTAGGGTA 60.693 57.143 0.00 0.00 45.64 3.69
2950 4617 2.335933 CGGTCCCAGGATTTAGGGTAT 58.664 52.381 0.00 0.00 45.64 2.73
2951 4618 2.038557 CGGTCCCAGGATTTAGGGTATG 59.961 54.545 0.00 0.00 45.64 2.39
2952 4619 2.375509 GGTCCCAGGATTTAGGGTATGG 59.624 54.545 0.00 0.00 45.64 2.74
2953 4620 2.062636 TCCCAGGATTTAGGGTATGGC 58.937 52.381 0.00 0.00 45.64 4.40
2954 4621 2.065799 CCCAGGATTTAGGGTATGGCT 58.934 52.381 0.00 0.00 40.34 4.75
2955 4622 2.040412 CCCAGGATTTAGGGTATGGCTC 59.960 54.545 0.00 0.00 40.34 4.70
2956 4623 2.040412 CCAGGATTTAGGGTATGGCTCC 59.960 54.545 0.00 0.00 0.00 4.70
2957 4624 1.978580 AGGATTTAGGGTATGGCTCCG 59.021 52.381 0.00 0.00 0.00 4.63
2958 4625 1.610886 GGATTTAGGGTATGGCTCCGC 60.611 57.143 0.00 0.00 0.00 5.54
2996 4663 4.570663 CCGCCCGGCTACTTCGAG 62.571 72.222 8.05 0.00 0.00 4.04
3020 4687 3.869272 GCCGCACTCATCGCCAAG 61.869 66.667 0.00 0.00 0.00 3.61
3021 4688 3.197790 CCGCACTCATCGCCAAGG 61.198 66.667 0.00 0.00 0.00 3.61
3022 4689 3.869272 CGCACTCATCGCCAAGGC 61.869 66.667 0.00 0.00 37.85 4.35
3023 4690 2.437359 GCACTCATCGCCAAGGCT 60.437 61.111 9.73 0.00 39.32 4.58
3024 4691 1.153369 GCACTCATCGCCAAGGCTA 60.153 57.895 9.73 0.00 39.32 3.93
3025 4692 1.432270 GCACTCATCGCCAAGGCTAC 61.432 60.000 9.73 0.00 39.32 3.58
3026 4693 0.811616 CACTCATCGCCAAGGCTACC 60.812 60.000 9.73 0.00 39.32 3.18
3027 4694 1.264749 ACTCATCGCCAAGGCTACCA 61.265 55.000 9.73 0.00 39.32 3.25
3028 4695 0.107703 CTCATCGCCAAGGCTACCAA 60.108 55.000 9.73 0.00 39.32 3.67
3029 4696 0.392461 TCATCGCCAAGGCTACCAAC 60.392 55.000 9.73 0.00 39.32 3.77
3030 4697 1.449601 ATCGCCAAGGCTACCAACG 60.450 57.895 9.73 0.00 39.32 4.10
3031 4698 3.799755 CGCCAAGGCTACCAACGC 61.800 66.667 9.73 0.00 39.32 4.84
3048 4715 3.816524 CCGCGACCGCTTCTCTCT 61.817 66.667 8.23 0.00 39.32 3.10
3049 4716 2.277628 CGCGACCGCTTCTCTCTC 60.278 66.667 12.69 0.00 39.32 3.20
3050 4717 2.277628 GCGACCGCTTCTCTCTCG 60.278 66.667 7.19 0.00 38.26 4.04
3052 4719 2.103340 GACCGCTTCTCTCTCGGC 59.897 66.667 0.00 0.00 46.49 5.54
3053 4720 3.418744 GACCGCTTCTCTCTCGGCC 62.419 68.421 0.00 0.00 46.49 6.13
3054 4721 4.214327 CCGCTTCTCTCTCGGCCC 62.214 72.222 0.00 0.00 36.53 5.80
3055 4722 3.144193 CGCTTCTCTCTCGGCCCT 61.144 66.667 0.00 0.00 0.00 5.19
3056 4723 2.811799 GCTTCTCTCTCGGCCCTC 59.188 66.667 0.00 0.00 0.00 4.30
3057 4724 2.055042 GCTTCTCTCTCGGCCCTCA 61.055 63.158 0.00 0.00 0.00 3.86
3058 4725 1.813192 CTTCTCTCTCGGCCCTCAC 59.187 63.158 0.00 0.00 0.00 3.51
3059 4726 1.671901 CTTCTCTCTCGGCCCTCACC 61.672 65.000 0.00 0.00 0.00 4.02
3060 4727 2.363018 CTCTCTCGGCCCTCACCA 60.363 66.667 0.00 0.00 0.00 4.17
3061 4728 1.760086 CTCTCTCGGCCCTCACCAT 60.760 63.158 0.00 0.00 0.00 3.55
3062 4729 0.468214 CTCTCTCGGCCCTCACCATA 60.468 60.000 0.00 0.00 0.00 2.74
3063 4730 0.468214 TCTCTCGGCCCTCACCATAG 60.468 60.000 0.00 0.00 0.00 2.23
3064 4731 2.093537 CTCTCGGCCCTCACCATAGC 62.094 65.000 0.00 0.00 0.00 2.97
3065 4732 2.041922 TCGGCCCTCACCATAGCT 60.042 61.111 0.00 0.00 0.00 3.32
3066 4733 2.093537 CTCGGCCCTCACCATAGCTC 62.094 65.000 0.00 0.00 0.00 4.09
3067 4734 2.832498 GGCCCTCACCATAGCTCC 59.168 66.667 0.00 0.00 0.00 4.70
3068 4735 2.072487 GGCCCTCACCATAGCTCCA 61.072 63.158 0.00 0.00 0.00 3.86
3069 4736 1.147153 GCCCTCACCATAGCTCCAC 59.853 63.158 0.00 0.00 0.00 4.02
3070 4737 1.626356 GCCCTCACCATAGCTCCACA 61.626 60.000 0.00 0.00 0.00 4.17
3071 4738 0.911769 CCCTCACCATAGCTCCACAA 59.088 55.000 0.00 0.00 0.00 3.33
3072 4739 1.281867 CCCTCACCATAGCTCCACAAA 59.718 52.381 0.00 0.00 0.00 2.83
3073 4740 2.290896 CCCTCACCATAGCTCCACAAAA 60.291 50.000 0.00 0.00 0.00 2.44
3074 4741 2.749621 CCTCACCATAGCTCCACAAAAC 59.250 50.000 0.00 0.00 0.00 2.43
3075 4742 3.560025 CCTCACCATAGCTCCACAAAACT 60.560 47.826 0.00 0.00 0.00 2.66
3076 4743 4.323485 CCTCACCATAGCTCCACAAAACTA 60.323 45.833 0.00 0.00 0.00 2.24
3077 4744 4.575885 TCACCATAGCTCCACAAAACTAC 58.424 43.478 0.00 0.00 0.00 2.73
3078 4745 3.689649 CACCATAGCTCCACAAAACTACC 59.310 47.826 0.00 0.00 0.00 3.18
3079 4746 3.279434 CCATAGCTCCACAAAACTACCC 58.721 50.000 0.00 0.00 0.00 3.69
3080 4747 3.054361 CCATAGCTCCACAAAACTACCCT 60.054 47.826 0.00 0.00 0.00 4.34
3081 4748 2.568623 AGCTCCACAAAACTACCCTG 57.431 50.000 0.00 0.00 0.00 4.45
3082 4749 0.881796 GCTCCACAAAACTACCCTGC 59.118 55.000 0.00 0.00 0.00 4.85
3083 4750 1.817740 GCTCCACAAAACTACCCTGCA 60.818 52.381 0.00 0.00 0.00 4.41
3084 4751 1.880027 CTCCACAAAACTACCCTGCAC 59.120 52.381 0.00 0.00 0.00 4.57
3085 4752 0.958822 CCACAAAACTACCCTGCACC 59.041 55.000 0.00 0.00 0.00 5.01
3086 4753 0.958822 CACAAAACTACCCTGCACCC 59.041 55.000 0.00 0.00 0.00 4.61
3087 4754 0.553819 ACAAAACTACCCTGCACCCA 59.446 50.000 0.00 0.00 0.00 4.51
3088 4755 1.146982 ACAAAACTACCCTGCACCCAT 59.853 47.619 0.00 0.00 0.00 4.00
3089 4756 1.818674 CAAAACTACCCTGCACCCATC 59.181 52.381 0.00 0.00 0.00 3.51
3090 4757 0.331616 AAACTACCCTGCACCCATCC 59.668 55.000 0.00 0.00 0.00 3.51
3091 4758 0.550147 AACTACCCTGCACCCATCCT 60.550 55.000 0.00 0.00 0.00 3.24
3092 4759 0.983378 ACTACCCTGCACCCATCCTC 60.983 60.000 0.00 0.00 0.00 3.71
3093 4760 2.032860 CTACCCTGCACCCATCCTCG 62.033 65.000 0.00 0.00 0.00 4.63
3094 4761 4.864334 CCCTGCACCCATCCTCGC 62.864 72.222 0.00 0.00 0.00 5.03
3095 4762 4.864334 CCTGCACCCATCCTCGCC 62.864 72.222 0.00 0.00 0.00 5.54
3099 4766 4.552365 CACCCATCCTCGCCGCAT 62.552 66.667 0.00 0.00 0.00 4.73
3100 4767 4.241555 ACCCATCCTCGCCGCATC 62.242 66.667 0.00 0.00 0.00 3.91
3101 4768 4.240103 CCCATCCTCGCCGCATCA 62.240 66.667 0.00 0.00 0.00 3.07
3102 4769 2.203056 CCATCCTCGCCGCATCAA 60.203 61.111 0.00 0.00 0.00 2.57
3103 4770 1.598962 CCATCCTCGCCGCATCAAT 60.599 57.895 0.00 0.00 0.00 2.57
3104 4771 0.320683 CCATCCTCGCCGCATCAATA 60.321 55.000 0.00 0.00 0.00 1.90
3105 4772 1.676916 CCATCCTCGCCGCATCAATAT 60.677 52.381 0.00 0.00 0.00 1.28
3106 4773 1.662629 CATCCTCGCCGCATCAATATC 59.337 52.381 0.00 0.00 0.00 1.63
3107 4774 0.969149 TCCTCGCCGCATCAATATCT 59.031 50.000 0.00 0.00 0.00 1.98
3108 4775 1.067565 TCCTCGCCGCATCAATATCTC 60.068 52.381 0.00 0.00 0.00 2.75
3109 4776 1.067283 CCTCGCCGCATCAATATCTCT 60.067 52.381 0.00 0.00 0.00 3.10
3110 4777 2.611473 CCTCGCCGCATCAATATCTCTT 60.611 50.000 0.00 0.00 0.00 2.85
3111 4778 2.407090 TCGCCGCATCAATATCTCTTG 58.593 47.619 0.00 0.00 0.00 3.02
3112 4779 1.136141 CGCCGCATCAATATCTCTTGC 60.136 52.381 0.00 0.00 0.00 4.01
3113 4780 2.149578 GCCGCATCAATATCTCTTGCT 58.850 47.619 0.00 0.00 0.00 3.91
3114 4781 2.095869 GCCGCATCAATATCTCTTGCTG 60.096 50.000 0.00 0.00 0.00 4.41
3115 4782 3.396560 CCGCATCAATATCTCTTGCTGA 58.603 45.455 0.00 0.00 0.00 4.26
3116 4783 3.186001 CCGCATCAATATCTCTTGCTGAC 59.814 47.826 0.00 0.00 0.00 3.51
3117 4784 3.805971 CGCATCAATATCTCTTGCTGACA 59.194 43.478 0.00 0.00 0.00 3.58
3118 4785 4.318618 CGCATCAATATCTCTTGCTGACAC 60.319 45.833 0.00 0.00 0.00 3.67
3119 4786 4.573607 GCATCAATATCTCTTGCTGACACA 59.426 41.667 0.00 0.00 0.00 3.72
3120 4787 5.065602 GCATCAATATCTCTTGCTGACACAA 59.934 40.000 0.00 0.00 0.00 3.33
3121 4788 6.238676 GCATCAATATCTCTTGCTGACACAAT 60.239 38.462 0.00 0.00 0.00 2.71
3122 4789 6.915544 TCAATATCTCTTGCTGACACAATC 57.084 37.500 0.00 0.00 0.00 2.67
3123 4790 6.647229 TCAATATCTCTTGCTGACACAATCT 58.353 36.000 0.00 0.00 0.00 2.40
3124 4791 6.760298 TCAATATCTCTTGCTGACACAATCTC 59.240 38.462 0.00 0.00 0.00 2.75
3125 4792 3.325293 TCTCTTGCTGACACAATCTCC 57.675 47.619 0.00 0.00 0.00 3.71
3126 4793 1.998315 CTCTTGCTGACACAATCTCCG 59.002 52.381 0.00 0.00 0.00 4.63
3127 4794 1.618343 TCTTGCTGACACAATCTCCGA 59.382 47.619 0.00 0.00 0.00 4.55
3128 4795 1.728971 CTTGCTGACACAATCTCCGAC 59.271 52.381 0.00 0.00 0.00 4.79
3129 4796 0.388520 TGCTGACACAATCTCCGACG 60.389 55.000 0.00 0.00 0.00 5.12
3130 4797 0.388649 GCTGACACAATCTCCGACGT 60.389 55.000 0.00 0.00 0.00 4.34
3131 4798 1.618861 CTGACACAATCTCCGACGTC 58.381 55.000 5.18 5.18 0.00 4.34
3132 4799 0.955905 TGACACAATCTCCGACGTCA 59.044 50.000 17.16 0.00 0.00 4.35
3133 4800 1.068541 TGACACAATCTCCGACGTCAG 60.069 52.381 17.16 3.99 0.00 3.51
3134 4801 0.388649 ACACAATCTCCGACGTCAGC 60.389 55.000 17.16 0.00 0.00 4.26
3135 4802 1.078759 CACAATCTCCGACGTCAGCC 61.079 60.000 17.16 0.00 0.00 4.85
3136 4803 1.519455 CAATCTCCGACGTCAGCCC 60.519 63.158 17.16 0.00 0.00 5.19
3137 4804 2.722201 AATCTCCGACGTCAGCCCC 61.722 63.158 17.16 0.00 0.00 5.80
3138 4805 3.663815 ATCTCCGACGTCAGCCCCT 62.664 63.158 17.16 0.00 0.00 4.79
3139 4806 2.280404 ATCTCCGACGTCAGCCCCTA 62.280 60.000 17.16 0.00 0.00 3.53
3140 4807 2.753043 TCCGACGTCAGCCCCTAC 60.753 66.667 17.16 0.00 0.00 3.18
3141 4808 3.066190 CCGACGTCAGCCCCTACA 61.066 66.667 17.16 0.00 0.00 2.74
3142 4809 2.423898 CCGACGTCAGCCCCTACAT 61.424 63.158 17.16 0.00 0.00 2.29
3143 4810 1.065928 CGACGTCAGCCCCTACATC 59.934 63.158 17.16 0.00 0.00 3.06
3144 4811 1.442148 GACGTCAGCCCCTACATCC 59.558 63.158 11.55 0.00 0.00 3.51
3145 4812 2.029307 GACGTCAGCCCCTACATCCC 62.029 65.000 11.55 0.00 0.00 3.85
3146 4813 2.808206 CGTCAGCCCCTACATCCCC 61.808 68.421 0.00 0.00 0.00 4.81
3147 4814 1.692749 GTCAGCCCCTACATCCCCA 60.693 63.158 0.00 0.00 0.00 4.96
3148 4815 1.062488 GTCAGCCCCTACATCCCCAT 61.062 60.000 0.00 0.00 0.00 4.00
3149 4816 0.570727 TCAGCCCCTACATCCCCATA 59.429 55.000 0.00 0.00 0.00 2.74
3150 4817 0.987294 CAGCCCCTACATCCCCATAG 59.013 60.000 0.00 0.00 0.00 2.23
3151 4818 0.573279 AGCCCCTACATCCCCATAGT 59.427 55.000 0.00 0.00 0.00 2.12
3152 4819 1.060561 AGCCCCTACATCCCCATAGTT 60.061 52.381 0.00 0.00 0.00 2.24
3153 4820 1.351350 GCCCCTACATCCCCATAGTTC 59.649 57.143 0.00 0.00 0.00 3.01
3154 4821 2.991580 CCCCTACATCCCCATAGTTCT 58.008 52.381 0.00 0.00 0.00 3.01
3155 4822 3.327439 CCCCTACATCCCCATAGTTCTT 58.673 50.000 0.00 0.00 0.00 2.52
3156 4823 3.073062 CCCCTACATCCCCATAGTTCTTG 59.927 52.174 0.00 0.00 0.00 3.02
3157 4824 3.973973 CCCTACATCCCCATAGTTCTTGA 59.026 47.826 0.00 0.00 0.00 3.02
3158 4825 4.599241 CCCTACATCCCCATAGTTCTTGAT 59.401 45.833 0.00 0.00 0.00 2.57
3159 4826 5.280215 CCCTACATCCCCATAGTTCTTGATC 60.280 48.000 0.00 0.00 0.00 2.92
3160 4827 5.545723 CCTACATCCCCATAGTTCTTGATCT 59.454 44.000 0.00 0.00 0.00 2.75
3161 4828 5.559148 ACATCCCCATAGTTCTTGATCTC 57.441 43.478 0.00 0.00 0.00 2.75
3162 4829 4.039730 ACATCCCCATAGTTCTTGATCTCG 59.960 45.833 0.00 0.00 0.00 4.04
3163 4830 2.365617 TCCCCATAGTTCTTGATCTCGC 59.634 50.000 0.00 0.00 0.00 5.03
3164 4831 2.548920 CCCCATAGTTCTTGATCTCGCC 60.549 54.545 0.00 0.00 0.00 5.54
3165 4832 2.398498 CCATAGTTCTTGATCTCGCCG 58.602 52.381 0.00 0.00 0.00 6.46
3166 4833 1.789464 CATAGTTCTTGATCTCGCCGC 59.211 52.381 0.00 0.00 0.00 6.53
3167 4834 0.102481 TAGTTCTTGATCTCGCCGCC 59.898 55.000 0.00 0.00 0.00 6.13
3168 4835 2.174319 GTTCTTGATCTCGCCGCCC 61.174 63.158 0.00 0.00 0.00 6.13
3169 4836 2.655073 TTCTTGATCTCGCCGCCCA 61.655 57.895 0.00 0.00 0.00 5.36
3170 4837 1.971505 TTCTTGATCTCGCCGCCCAT 61.972 55.000 0.00 0.00 0.00 4.00
3171 4838 1.112916 TCTTGATCTCGCCGCCCATA 61.113 55.000 0.00 0.00 0.00 2.74
3172 4839 0.249868 CTTGATCTCGCCGCCCATAA 60.250 55.000 0.00 0.00 0.00 1.90
3173 4840 0.531974 TTGATCTCGCCGCCCATAAC 60.532 55.000 0.00 0.00 0.00 1.89
3174 4841 1.367840 GATCTCGCCGCCCATAACT 59.632 57.895 0.00 0.00 0.00 2.24
3175 4842 0.601558 GATCTCGCCGCCCATAACTA 59.398 55.000 0.00 0.00 0.00 2.24
3176 4843 0.317479 ATCTCGCCGCCCATAACTAC 59.683 55.000 0.00 0.00 0.00 2.73
3177 4844 0.754217 TCTCGCCGCCCATAACTACT 60.754 55.000 0.00 0.00 0.00 2.57
3178 4845 0.956633 CTCGCCGCCCATAACTACTA 59.043 55.000 0.00 0.00 0.00 1.82
3179 4846 0.670162 TCGCCGCCCATAACTACTAC 59.330 55.000 0.00 0.00 0.00 2.73
3180 4847 0.319297 CGCCGCCCATAACTACTACC 60.319 60.000 0.00 0.00 0.00 3.18
3181 4848 0.754472 GCCGCCCATAACTACTACCA 59.246 55.000 0.00 0.00 0.00 3.25
3182 4849 1.346722 GCCGCCCATAACTACTACCAT 59.653 52.381 0.00 0.00 0.00 3.55
3183 4850 2.224450 GCCGCCCATAACTACTACCATT 60.224 50.000 0.00 0.00 0.00 3.16
3184 4851 3.399330 CCGCCCATAACTACTACCATTG 58.601 50.000 0.00 0.00 0.00 2.82
3185 4852 3.399330 CGCCCATAACTACTACCATTGG 58.601 50.000 0.00 0.00 0.00 3.16
3186 4853 3.070446 CGCCCATAACTACTACCATTGGA 59.930 47.826 10.37 0.00 0.00 3.53
3187 4854 4.642429 GCCCATAACTACTACCATTGGAG 58.358 47.826 10.37 5.22 0.00 3.86
3188 4855 4.347000 GCCCATAACTACTACCATTGGAGA 59.653 45.833 10.37 0.00 0.00 3.71
3189 4856 5.742255 GCCCATAACTACTACCATTGGAGAC 60.742 48.000 10.37 0.00 0.00 3.36
3190 4857 5.365605 CCCATAACTACTACCATTGGAGACA 59.634 44.000 10.37 0.00 39.83 3.41
3191 4858 6.043243 CCCATAACTACTACCATTGGAGACAT 59.957 42.308 10.37 0.00 42.32 3.06
3192 4859 7.155328 CCATAACTACTACCATTGGAGACATC 58.845 42.308 10.37 0.00 42.32 3.06
3193 4860 7.015682 CCATAACTACTACCATTGGAGACATCT 59.984 40.741 10.37 0.00 42.32 2.90
3194 4861 6.472686 AACTACTACCATTGGAGACATCTC 57.527 41.667 10.37 0.00 42.32 2.75
3195 4862 5.772004 ACTACTACCATTGGAGACATCTCT 58.228 41.667 10.37 0.00 42.48 3.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.019174 CCTCCCATAATTTCTGTGTGCTT 58.981 43.478 0.00 0.00 0.00 3.91
13 14 2.481441 AGCAGTCATCACCTCCCATAA 58.519 47.619 0.00 0.00 0.00 1.90
76 79 3.802948 ACCCTTGATCGTACAGATGTC 57.197 47.619 5.18 0.00 40.26 3.06
133 136 1.000274 GTTCAAACATTGCCGCTCCTT 60.000 47.619 0.00 0.00 0.00 3.36
179 182 2.813754 CACATGAGTTTCCCAATCACGT 59.186 45.455 0.00 0.00 0.00 4.49
205 208 5.594724 ATGTTCAACCAAATCATTTTGCG 57.405 34.783 0.00 0.00 40.77 4.85
224 227 2.428171 GCCAACATGAGCCAACATATGT 59.572 45.455 1.41 1.41 35.43 2.29
232 235 0.758310 TTGGTTGCCAACATGAGCCA 60.758 50.000 10.18 0.00 38.75 4.75
310 313 8.746052 ATAAAATAGCATAGTTGTACAAGCCA 57.254 30.769 8.98 0.00 0.00 4.75
409 424 1.156736 GCTAGCCGCTCTGTTTCAAA 58.843 50.000 2.29 0.00 35.14 2.69
467 483 1.459450 TTTAGATTTGGGTCGGCAGC 58.541 50.000 0.00 0.00 0.00 5.25
511 527 2.858839 CTTTTTATCCGTTTGGGTCGC 58.141 47.619 0.00 0.00 37.00 5.19
525 541 1.761206 GCGCTTTTGTCCGCTTTTTA 58.239 45.000 0.00 0.00 46.14 1.52
598 615 2.261671 GTCCAGTCGCGTCCACAT 59.738 61.111 5.77 0.00 0.00 3.21
643 660 1.913262 CAAAGGGCCCCTCAAACCC 60.913 63.158 21.43 0.00 44.62 4.11
646 666 2.530801 CCCAAAGGGCCCCTCAAA 59.469 61.111 21.43 0.00 35.35 2.69
660 681 2.300967 GCATCTCCACTCACCCCCA 61.301 63.158 0.00 0.00 0.00 4.96
661 682 1.977293 GAGCATCTCCACTCACCCCC 61.977 65.000 0.00 0.00 32.98 5.40
662 683 1.524482 GAGCATCTCCACTCACCCC 59.476 63.158 0.00 0.00 32.98 4.95
683 704 2.028484 GTGACGCGGTCAAGTGGA 59.972 61.111 12.47 0.00 44.49 4.02
695 716 2.016704 GTGTGTGAGCCGAGTGACG 61.017 63.158 0.00 0.00 42.18 4.35
697 718 0.249447 CTTGTGTGTGAGCCGAGTGA 60.249 55.000 0.00 0.00 0.00 3.41
813 835 9.176460 TGTATCTGCATGTTCATTTCATTTCTA 57.824 29.630 0.00 0.00 0.00 2.10
856 878 3.767673 TCCCTTCGTCTGTTAGCTGTAAT 59.232 43.478 0.00 0.00 0.00 1.89
875 897 0.249398 ATCACGCACCAACTACTCCC 59.751 55.000 0.00 0.00 0.00 4.30
1886 3383 0.398318 AAGAAGGCGTCCTTGCTCTT 59.602 50.000 14.63 9.72 44.82 2.85
2188 3758 1.135489 AGCAACGACGATCGAAAGCTA 60.135 47.619 24.34 0.00 43.74 3.32
2208 3786 9.676861 AATTGACATAGTTCATCAAGATCAGAA 57.323 29.630 0.00 0.00 35.89 3.02
2290 3881 2.549754 CCTTTGCCTTACACTCACACAG 59.450 50.000 0.00 0.00 0.00 3.66
2291 3882 2.092646 ACCTTTGCCTTACACTCACACA 60.093 45.455 0.00 0.00 0.00 3.72
2294 3885 2.846193 TCACCTTTGCCTTACACTCAC 58.154 47.619 0.00 0.00 0.00 3.51
2295 3886 3.072330 TCATCACCTTTGCCTTACACTCA 59.928 43.478 0.00 0.00 0.00 3.41
2297 3888 3.788227 TCATCACCTTTGCCTTACACT 57.212 42.857 0.00 0.00 0.00 3.55
2298 3889 3.129287 CCATCATCACCTTTGCCTTACAC 59.871 47.826 0.00 0.00 0.00 2.90
2299 3890 3.355378 CCATCATCACCTTTGCCTTACA 58.645 45.455 0.00 0.00 0.00 2.41
2301 3892 2.311542 ACCCATCATCACCTTTGCCTTA 59.688 45.455 0.00 0.00 0.00 2.69
2302 3893 1.077663 ACCCATCATCACCTTTGCCTT 59.922 47.619 0.00 0.00 0.00 4.35
2303 3894 0.706433 ACCCATCATCACCTTTGCCT 59.294 50.000 0.00 0.00 0.00 4.75
2304 3895 1.106285 GACCCATCATCACCTTTGCC 58.894 55.000 0.00 0.00 0.00 4.52
2305 3896 0.734889 CGACCCATCATCACCTTTGC 59.265 55.000 0.00 0.00 0.00 3.68
2308 3899 1.866015 TCTCGACCCATCATCACCTT 58.134 50.000 0.00 0.00 0.00 3.50
2309 3900 1.866015 TTCTCGACCCATCATCACCT 58.134 50.000 0.00 0.00 0.00 4.00
2310 3901 2.280628 GTTTCTCGACCCATCATCACC 58.719 52.381 0.00 0.00 0.00 4.02
2311 3902 1.927174 CGTTTCTCGACCCATCATCAC 59.073 52.381 0.00 0.00 42.86 3.06
2312 3903 1.739035 GCGTTTCTCGACCCATCATCA 60.739 52.381 0.00 0.00 42.86 3.07
2314 3905 0.249120 TGCGTTTCTCGACCCATCAT 59.751 50.000 0.00 0.00 42.86 2.45
2378 3969 3.310193 GCTAGGTATGAGGTCCCTCTTT 58.690 50.000 14.20 5.02 43.12 2.52
2384 3975 2.167900 ACGTTTGCTAGGTATGAGGTCC 59.832 50.000 0.00 0.00 0.00 4.46
2400 4060 4.764896 GTCCCCTGACGAACGTTT 57.235 55.556 0.46 0.00 0.00 3.60
2456 4116 9.653287 CTCAACTTAAACTGTCATACCATCTAA 57.347 33.333 0.00 0.00 0.00 2.10
2457 4117 9.031537 TCTCAACTTAAACTGTCATACCATCTA 57.968 33.333 0.00 0.00 0.00 1.98
2458 4118 7.907389 TCTCAACTTAAACTGTCATACCATCT 58.093 34.615 0.00 0.00 0.00 2.90
2459 4119 7.278868 CCTCTCAACTTAAACTGTCATACCATC 59.721 40.741 0.00 0.00 0.00 3.51
2460 4120 7.106239 CCTCTCAACTTAAACTGTCATACCAT 58.894 38.462 0.00 0.00 0.00 3.55
2461 4121 6.464222 CCTCTCAACTTAAACTGTCATACCA 58.536 40.000 0.00 0.00 0.00 3.25
2462 4122 5.875359 CCCTCTCAACTTAAACTGTCATACC 59.125 44.000 0.00 0.00 0.00 2.73
2463 4123 6.698380 TCCCTCTCAACTTAAACTGTCATAC 58.302 40.000 0.00 0.00 0.00 2.39
2464 4124 6.724441 TCTCCCTCTCAACTTAAACTGTCATA 59.276 38.462 0.00 0.00 0.00 2.15
2465 4125 5.544176 TCTCCCTCTCAACTTAAACTGTCAT 59.456 40.000 0.00 0.00 0.00 3.06
2466 4126 4.899457 TCTCCCTCTCAACTTAAACTGTCA 59.101 41.667 0.00 0.00 0.00 3.58
2467 4127 5.244178 TCTCTCCCTCTCAACTTAAACTGTC 59.756 44.000 0.00 0.00 0.00 3.51
2468 4128 5.148502 TCTCTCCCTCTCAACTTAAACTGT 58.851 41.667 0.00 0.00 0.00 3.55
2469 4129 5.337169 CCTCTCTCCCTCTCAACTTAAACTG 60.337 48.000 0.00 0.00 0.00 3.16
2470 4130 4.775253 CCTCTCTCCCTCTCAACTTAAACT 59.225 45.833 0.00 0.00 0.00 2.66
2471 4131 4.773149 TCCTCTCTCCCTCTCAACTTAAAC 59.227 45.833 0.00 0.00 0.00 2.01
2472 4132 5.011982 TCCTCTCTCCCTCTCAACTTAAA 57.988 43.478 0.00 0.00 0.00 1.52
2473 4133 4.292571 TCTCCTCTCTCCCTCTCAACTTAA 59.707 45.833 0.00 0.00 0.00 1.85
2474 4134 3.853181 TCTCCTCTCTCCCTCTCAACTTA 59.147 47.826 0.00 0.00 0.00 2.24
2475 4135 2.652348 TCTCCTCTCTCCCTCTCAACTT 59.348 50.000 0.00 0.00 0.00 2.66
2530 4195 0.187361 TTGAGGACAACCCCCTTTGG 59.813 55.000 0.00 0.00 36.73 3.28
2531 4196 1.686587 GTTTGAGGACAACCCCCTTTG 59.313 52.381 0.00 0.00 35.63 2.77
2532 4197 1.752788 CGTTTGAGGACAACCCCCTTT 60.753 52.381 0.00 0.00 35.63 3.11
2533 4198 0.179001 CGTTTGAGGACAACCCCCTT 60.179 55.000 0.00 0.00 35.63 3.95
2534 4199 1.350310 ACGTTTGAGGACAACCCCCT 61.350 55.000 0.00 0.00 35.63 4.79
2535 4200 1.149854 ACGTTTGAGGACAACCCCC 59.850 57.895 0.00 0.00 35.63 5.40
2536 4201 0.179040 TCACGTTTGAGGACAACCCC 60.179 55.000 0.00 0.00 35.63 4.95
2537 4202 1.332686 GTTCACGTTTGAGGACAACCC 59.667 52.381 0.00 0.00 35.63 4.11
2538 4203 1.004292 CGTTCACGTTTGAGGACAACC 60.004 52.381 0.00 0.00 35.63 3.77
2539 4204 1.593793 GCGTTCACGTTTGAGGACAAC 60.594 52.381 0.62 0.00 42.22 3.32
2540 4205 0.653636 GCGTTCACGTTTGAGGACAA 59.346 50.000 0.62 0.00 42.22 3.18
2541 4206 0.460459 TGCGTTCACGTTTGAGGACA 60.460 50.000 0.62 0.00 42.22 4.02
2542 4207 0.653636 TTGCGTTCACGTTTGAGGAC 59.346 50.000 0.62 0.00 42.22 3.85
2543 4208 1.588674 ATTGCGTTCACGTTTGAGGA 58.411 45.000 0.62 0.00 42.22 3.71
2544 4209 2.399396 AATTGCGTTCACGTTTGAGG 57.601 45.000 0.62 0.00 42.22 3.86
2545 4210 4.031201 ACAAAAATTGCGTTCACGTTTGAG 59.969 37.500 15.28 3.38 42.22 3.02
2546 4211 3.921021 ACAAAAATTGCGTTCACGTTTGA 59.079 34.783 15.28 0.00 42.22 2.69
2547 4212 4.012111 CACAAAAATTGCGTTCACGTTTG 58.988 39.130 9.54 9.54 42.22 2.93
2548 4213 3.675698 ACACAAAAATTGCGTTCACGTTT 59.324 34.783 0.62 0.00 42.22 3.60
2549 4214 3.246619 ACACAAAAATTGCGTTCACGTT 58.753 36.364 0.62 0.00 42.22 3.99
2550 4215 2.869897 ACACAAAAATTGCGTTCACGT 58.130 38.095 0.62 0.00 42.22 4.49
2551 4216 5.362987 TTTACACAAAAATTGCGTTCACG 57.637 34.783 0.00 0.00 43.27 4.35
2552 4217 7.230914 AGTTTTTACACAAAAATTGCGTTCAC 58.769 30.769 0.00 0.00 43.56 3.18
2553 4218 7.352719 AGTTTTTACACAAAAATTGCGTTCA 57.647 28.000 0.00 0.00 43.56 3.18
2615 4281 2.157668 GCAAGCGAACCGTATATGATGG 59.842 50.000 0.00 0.00 40.52 3.51
2660 4326 8.824781 CAGTCTCTTTGTTGATAATGGTAGATG 58.175 37.037 0.00 0.00 0.00 2.90
2662 4328 8.134202 TCAGTCTCTTTGTTGATAATGGTAGA 57.866 34.615 0.00 0.00 0.00 2.59
2672 4338 5.359194 AGGAAACTCAGTCTCTTTGTTGA 57.641 39.130 0.00 0.00 32.90 3.18
2674 4340 5.995446 AGAAGGAAACTCAGTCTCTTTGTT 58.005 37.500 0.00 0.00 42.68 2.83
2693 4359 6.036577 AGCTCTCTCTTTTCTTGGTAGAAG 57.963 41.667 0.00 0.00 41.25 2.85
2722 4389 6.223852 ACTCGAAAGCTCTGTCAAGAAATAA 58.776 36.000 0.00 0.00 30.03 1.40
2723 4390 5.784177 ACTCGAAAGCTCTGTCAAGAAATA 58.216 37.500 0.00 0.00 30.03 1.40
2724 4391 4.636249 ACTCGAAAGCTCTGTCAAGAAAT 58.364 39.130 0.00 0.00 30.03 2.17
2753 4420 1.065199 ACATGGGTCGTCAGATGCAAT 60.065 47.619 0.00 0.00 0.00 3.56
2767 4434 3.253188 CCTAACAGAACACACAACATGGG 59.747 47.826 0.00 0.00 37.93 4.00
2784 4451 8.115490 ACGTATACCATAATGACTACCCTAAC 57.885 38.462 0.00 0.00 0.00 2.34
2785 4452 9.453572 CTACGTATACCATAATGACTACCCTAA 57.546 37.037 0.00 0.00 0.00 2.69
2786 4453 8.605947 ACTACGTATACCATAATGACTACCCTA 58.394 37.037 0.00 0.00 0.00 3.53
2787 4454 7.465116 ACTACGTATACCATAATGACTACCCT 58.535 38.462 0.00 0.00 0.00 4.34
2788 4455 7.148171 GGACTACGTATACCATAATGACTACCC 60.148 44.444 11.61 0.00 0.00 3.69
2789 4456 7.391554 TGGACTACGTATACCATAATGACTACC 59.608 40.741 14.21 0.00 0.00 3.18
2790 4457 8.327941 TGGACTACGTATACCATAATGACTAC 57.672 38.462 14.21 0.00 0.00 2.73
2791 4458 8.922931 TTGGACTACGTATACCATAATGACTA 57.077 34.615 17.44 2.69 32.31 2.59
2792 4459 7.504911 ACTTGGACTACGTATACCATAATGACT 59.495 37.037 17.44 0.00 32.31 3.41
2793 4460 7.655490 ACTTGGACTACGTATACCATAATGAC 58.345 38.462 17.44 0.00 32.31 3.06
2794 4461 7.503230 TGACTTGGACTACGTATACCATAATGA 59.497 37.037 17.44 5.84 32.31 2.57
2795 4462 7.654568 TGACTTGGACTACGTATACCATAATG 58.345 38.462 17.44 12.09 32.31 1.90
2796 4463 7.504911 ACTGACTTGGACTACGTATACCATAAT 59.495 37.037 17.44 9.16 32.31 1.28
2797 4464 6.830324 ACTGACTTGGACTACGTATACCATAA 59.170 38.462 17.44 6.92 32.31 1.90
2798 4465 6.359804 ACTGACTTGGACTACGTATACCATA 58.640 40.000 17.44 10.22 32.31 2.74
2799 4466 5.198965 ACTGACTTGGACTACGTATACCAT 58.801 41.667 17.44 7.52 32.31 3.55
2800 4467 4.592942 ACTGACTTGGACTACGTATACCA 58.407 43.478 14.21 14.21 0.00 3.25
2801 4468 5.573337 AACTGACTTGGACTACGTATACC 57.427 43.478 0.00 3.47 0.00 2.73
2802 4469 6.865205 ACAAAACTGACTTGGACTACGTATAC 59.135 38.462 0.00 0.00 0.00 1.47
2803 4470 6.985117 ACAAAACTGACTTGGACTACGTATA 58.015 36.000 0.00 0.00 0.00 1.47
2804 4471 5.850614 ACAAAACTGACTTGGACTACGTAT 58.149 37.500 0.00 0.00 0.00 3.06
2805 4472 5.266733 ACAAAACTGACTTGGACTACGTA 57.733 39.130 0.00 0.00 0.00 3.57
2806 4473 4.133013 ACAAAACTGACTTGGACTACGT 57.867 40.909 0.00 0.00 0.00 3.57
2807 4474 4.446719 GGTACAAAACTGACTTGGACTACG 59.553 45.833 0.00 0.00 37.69 3.51
2808 4475 4.753610 GGGTACAAAACTGACTTGGACTAC 59.246 45.833 0.00 1.21 37.69 2.73
2809 4476 4.202388 GGGGTACAAAACTGACTTGGACTA 60.202 45.833 0.00 0.00 37.69 2.59
2810 4477 3.434596 GGGGTACAAAACTGACTTGGACT 60.435 47.826 0.00 0.00 37.69 3.85
2811 4478 2.882761 GGGGTACAAAACTGACTTGGAC 59.117 50.000 0.00 1.73 36.96 4.02
2812 4479 2.781174 AGGGGTACAAAACTGACTTGGA 59.219 45.455 0.00 0.00 0.00 3.53
2813 4480 3.223674 AGGGGTACAAAACTGACTTGG 57.776 47.619 0.00 0.00 0.00 3.61
2814 4481 4.941873 GGATAGGGGTACAAAACTGACTTG 59.058 45.833 0.00 0.00 0.00 3.16
2815 4482 4.850386 AGGATAGGGGTACAAAACTGACTT 59.150 41.667 0.00 0.00 0.00 3.01
2816 4483 4.436079 AGGATAGGGGTACAAAACTGACT 58.564 43.478 0.00 0.00 0.00 3.41
2817 4484 4.838904 AGGATAGGGGTACAAAACTGAC 57.161 45.455 0.00 0.00 0.00 3.51
2818 4485 6.027482 ACTTAGGATAGGGGTACAAAACTGA 58.973 40.000 0.00 0.00 0.00 3.41
2819 4486 6.309389 ACTTAGGATAGGGGTACAAAACTG 57.691 41.667 0.00 0.00 0.00 3.16
2820 4487 5.128335 CGACTTAGGATAGGGGTACAAAACT 59.872 44.000 0.00 0.00 0.00 2.66
2821 4488 5.354767 CGACTTAGGATAGGGGTACAAAAC 58.645 45.833 0.00 0.00 0.00 2.43
2822 4489 4.406649 CCGACTTAGGATAGGGGTACAAAA 59.593 45.833 0.00 0.00 0.00 2.44
2823 4490 3.962718 CCGACTTAGGATAGGGGTACAAA 59.037 47.826 0.00 0.00 0.00 2.83
2824 4491 3.052642 ACCGACTTAGGATAGGGGTACAA 60.053 47.826 0.00 0.00 34.73 2.41
2825 4492 2.515429 ACCGACTTAGGATAGGGGTACA 59.485 50.000 0.00 0.00 34.73 2.90
2826 4493 3.235750 ACCGACTTAGGATAGGGGTAC 57.764 52.381 0.00 0.00 34.73 3.34
2827 4494 3.979501 AACCGACTTAGGATAGGGGTA 57.020 47.619 0.00 0.00 34.73 3.69
2828 4495 2.862850 AACCGACTTAGGATAGGGGT 57.137 50.000 0.00 0.00 34.73 4.95
2829 4496 6.097981 GGATATAAACCGACTTAGGATAGGGG 59.902 46.154 0.00 0.00 34.73 4.79
2830 4497 6.896307 AGGATATAAACCGACTTAGGATAGGG 59.104 42.308 0.00 0.00 34.73 3.53
2831 4498 7.835181 AGAGGATATAAACCGACTTAGGATAGG 59.165 40.741 0.00 0.00 34.73 2.57
2832 4499 8.810990 AGAGGATATAAACCGACTTAGGATAG 57.189 38.462 0.00 0.00 34.73 2.08
2834 4501 9.771140 ATAAGAGGATATAAACCGACTTAGGAT 57.229 33.333 16.94 7.92 36.07 3.24
2850 4517 9.121658 CGGCATACAAGAGTATATAAGAGGATA 57.878 37.037 0.00 0.00 38.88 2.59
2851 4518 7.616150 ACGGCATACAAGAGTATATAAGAGGAT 59.384 37.037 0.00 0.00 38.88 3.24
2852 4519 6.946583 ACGGCATACAAGAGTATATAAGAGGA 59.053 38.462 0.00 0.00 38.88 3.71
2853 4520 7.159322 ACGGCATACAAGAGTATATAAGAGG 57.841 40.000 0.00 0.00 38.88 3.69
2854 4521 8.182881 GGTACGGCATACAAGAGTATATAAGAG 58.817 40.741 0.00 0.00 38.88 2.85
2855 4522 7.666804 TGGTACGGCATACAAGAGTATATAAGA 59.333 37.037 0.00 0.00 38.88 2.10
2856 4523 7.823665 TGGTACGGCATACAAGAGTATATAAG 58.176 38.462 0.00 0.00 38.88 1.73
2857 4524 7.764141 TGGTACGGCATACAAGAGTATATAA 57.236 36.000 0.00 0.00 38.88 0.98
2858 4525 7.764141 TTGGTACGGCATACAAGAGTATATA 57.236 36.000 0.00 0.00 38.88 0.86
2859 4526 6.659745 TTGGTACGGCATACAAGAGTATAT 57.340 37.500 0.00 0.00 38.88 0.86
2860 4527 6.468333 TTTGGTACGGCATACAAGAGTATA 57.532 37.500 0.00 0.00 38.88 1.47
2861 4528 5.347620 TTTGGTACGGCATACAAGAGTAT 57.652 39.130 0.00 0.00 41.57 2.12
2862 4529 4.804868 TTTGGTACGGCATACAAGAGTA 57.195 40.909 0.00 0.00 35.23 2.59
2863 4530 3.688694 TTTGGTACGGCATACAAGAGT 57.311 42.857 0.00 0.00 35.23 3.24
2864 4531 4.188462 TGATTTGGTACGGCATACAAGAG 58.812 43.478 0.00 0.00 35.23 2.85
2865 4532 4.209307 TGATTTGGTACGGCATACAAGA 57.791 40.909 0.00 0.00 35.23 3.02
2866 4533 4.574421 TGATGATTTGGTACGGCATACAAG 59.426 41.667 0.00 0.00 35.23 3.16
2867 4534 4.518249 TGATGATTTGGTACGGCATACAA 58.482 39.130 0.00 0.00 35.23 2.41
2868 4535 4.143986 TGATGATTTGGTACGGCATACA 57.856 40.909 0.00 0.00 35.23 2.29
2869 4536 5.689383 ATTGATGATTTGGTACGGCATAC 57.311 39.130 0.00 0.00 0.00 2.39
2870 4537 6.072728 GCTTATTGATGATTTGGTACGGCATA 60.073 38.462 0.00 0.00 0.00 3.14
2871 4538 5.278463 GCTTATTGATGATTTGGTACGGCAT 60.278 40.000 0.00 0.00 0.00 4.40
2872 4539 4.036262 GCTTATTGATGATTTGGTACGGCA 59.964 41.667 0.00 0.00 0.00 5.69
2873 4540 4.036262 TGCTTATTGATGATTTGGTACGGC 59.964 41.667 0.00 0.00 0.00 5.68
2874 4541 5.749596 TGCTTATTGATGATTTGGTACGG 57.250 39.130 0.00 0.00 0.00 4.02
2875 4542 6.550843 TGTTGCTTATTGATGATTTGGTACG 58.449 36.000 0.00 0.00 0.00 3.67
2876 4543 7.538575 ACTGTTGCTTATTGATGATTTGGTAC 58.461 34.615 0.00 0.00 0.00 3.34
2877 4544 7.701539 ACTGTTGCTTATTGATGATTTGGTA 57.298 32.000 0.00 0.00 0.00 3.25
2878 4545 6.594788 ACTGTTGCTTATTGATGATTTGGT 57.405 33.333 0.00 0.00 0.00 3.67
2879 4546 7.894376 AAACTGTTGCTTATTGATGATTTGG 57.106 32.000 0.00 0.00 0.00 3.28
2884 4551 9.844790 CTGAATAAAACTGTTGCTTATTGATGA 57.155 29.630 12.52 0.00 0.00 2.92
2885 4552 8.589629 GCTGAATAAAACTGTTGCTTATTGATG 58.410 33.333 12.52 6.16 0.00 3.07
2886 4553 8.526147 AGCTGAATAAAACTGTTGCTTATTGAT 58.474 29.630 12.52 0.15 0.00 2.57
2887 4554 7.885297 AGCTGAATAAAACTGTTGCTTATTGA 58.115 30.769 12.52 6.05 0.00 2.57
2888 4555 8.524870 AAGCTGAATAAAACTGTTGCTTATTG 57.475 30.769 12.52 4.06 37.68 1.90
2889 4556 9.196552 GAAAGCTGAATAAAACTGTTGCTTATT 57.803 29.630 10.97 9.98 38.36 1.40
2890 4557 8.359642 TGAAAGCTGAATAAAACTGTTGCTTAT 58.640 29.630 10.97 2.97 38.36 1.73
2891 4558 7.711846 TGAAAGCTGAATAAAACTGTTGCTTA 58.288 30.769 10.97 0.91 38.36 3.09
2892 4559 6.572519 TGAAAGCTGAATAAAACTGTTGCTT 58.427 32.000 6.28 6.28 40.59 3.91
2893 4560 6.147864 TGAAAGCTGAATAAAACTGTTGCT 57.852 33.333 0.00 0.00 0.00 3.91
2894 4561 6.128742 CCATGAAAGCTGAATAAAACTGTTGC 60.129 38.462 0.00 0.00 0.00 4.17
2895 4562 6.925165 ACCATGAAAGCTGAATAAAACTGTTG 59.075 34.615 0.00 0.00 0.00 3.33
2896 4563 7.054491 ACCATGAAAGCTGAATAAAACTGTT 57.946 32.000 0.00 0.00 0.00 3.16
2897 4564 6.655078 ACCATGAAAGCTGAATAAAACTGT 57.345 33.333 0.00 0.00 0.00 3.55
2898 4565 8.461222 TGATACCATGAAAGCTGAATAAAACTG 58.539 33.333 0.00 0.00 0.00 3.16
2899 4566 8.579850 TGATACCATGAAAGCTGAATAAAACT 57.420 30.769 0.00 0.00 0.00 2.66
2900 4567 8.677300 TCTGATACCATGAAAGCTGAATAAAAC 58.323 33.333 0.00 0.00 0.00 2.43
2901 4568 8.806429 TCTGATACCATGAAAGCTGAATAAAA 57.194 30.769 0.00 0.00 0.00 1.52
2902 4569 8.985315 ATCTGATACCATGAAAGCTGAATAAA 57.015 30.769 0.00 0.00 0.00 1.40
2903 4570 9.494271 GTATCTGATACCATGAAAGCTGAATAA 57.506 33.333 15.40 0.00 0.00 1.40
2905 4572 7.976135 GTATCTGATACCATGAAAGCTGAAT 57.024 36.000 15.40 0.00 0.00 2.57
2919 4586 1.893801 CCTGGGACCGGTATCTGATAC 59.106 57.143 17.52 17.52 35.00 2.24
2920 4587 1.784593 TCCTGGGACCGGTATCTGATA 59.215 52.381 7.34 0.00 0.00 2.15
2921 4588 0.561184 TCCTGGGACCGGTATCTGAT 59.439 55.000 7.34 0.00 0.00 2.90
2922 4589 0.561184 ATCCTGGGACCGGTATCTGA 59.439 55.000 7.34 0.74 0.00 3.27
2923 4590 1.424638 AATCCTGGGACCGGTATCTG 58.575 55.000 7.34 6.82 0.00 2.90
2924 4591 2.191981 AAATCCTGGGACCGGTATCT 57.808 50.000 7.34 0.00 0.00 1.98
2925 4592 2.302157 CCTAAATCCTGGGACCGGTATC 59.698 54.545 7.34 2.84 0.00 2.24
2926 4593 2.335933 CCTAAATCCTGGGACCGGTAT 58.664 52.381 7.34 0.00 0.00 2.73
2927 4594 1.693404 CCCTAAATCCTGGGACCGGTA 60.693 57.143 7.34 0.00 46.15 4.02
2928 4595 0.986550 CCCTAAATCCTGGGACCGGT 60.987 60.000 6.92 6.92 46.15 5.28
2929 4596 0.986550 ACCCTAAATCCTGGGACCGG 60.987 60.000 0.00 0.00 46.15 5.28
2930 4597 1.797320 TACCCTAAATCCTGGGACCG 58.203 55.000 4.93 0.00 46.15 4.79
2931 4598 2.375509 CCATACCCTAAATCCTGGGACC 59.624 54.545 4.93 0.00 46.15 4.46
2932 4599 2.224793 GCCATACCCTAAATCCTGGGAC 60.225 54.545 4.93 0.00 46.15 4.46
2933 4600 2.062636 GCCATACCCTAAATCCTGGGA 58.937 52.381 4.93 0.00 46.15 4.37
2935 4602 2.040412 GGAGCCATACCCTAAATCCTGG 59.960 54.545 0.00 0.00 0.00 4.45
2936 4603 2.289694 CGGAGCCATACCCTAAATCCTG 60.290 54.545 0.00 0.00 0.00 3.86
2937 4604 1.978580 CGGAGCCATACCCTAAATCCT 59.021 52.381 0.00 0.00 0.00 3.24
2938 4605 2.474410 CGGAGCCATACCCTAAATCC 57.526 55.000 0.00 0.00 0.00 3.01
2979 4646 4.570663 CTCGAAGTAGCCGGGCGG 62.571 72.222 14.39 0.00 38.57 6.13
3004 4671 3.197790 CCTTGGCGATGAGTGCGG 61.198 66.667 0.00 0.00 0.00 5.69
3005 4672 2.906182 TAGCCTTGGCGATGAGTGCG 62.906 60.000 5.95 0.00 0.00 5.34
3006 4673 1.153369 TAGCCTTGGCGATGAGTGC 60.153 57.895 5.95 0.00 0.00 4.40
3007 4674 0.811616 GGTAGCCTTGGCGATGAGTG 60.812 60.000 5.95 0.00 0.00 3.51
3008 4675 1.264749 TGGTAGCCTTGGCGATGAGT 61.265 55.000 5.95 0.00 0.00 3.41
3009 4676 0.107703 TTGGTAGCCTTGGCGATGAG 60.108 55.000 5.95 0.00 0.00 2.90
3010 4677 0.392461 GTTGGTAGCCTTGGCGATGA 60.392 55.000 5.95 0.00 0.00 2.92
3011 4678 1.705337 CGTTGGTAGCCTTGGCGATG 61.705 60.000 5.95 0.00 0.00 3.84
3012 4679 1.449601 CGTTGGTAGCCTTGGCGAT 60.450 57.895 5.95 0.00 0.00 4.58
3013 4680 2.047655 CGTTGGTAGCCTTGGCGA 60.048 61.111 5.95 0.00 0.00 5.54
3014 4681 3.799755 GCGTTGGTAGCCTTGGCG 61.800 66.667 5.95 0.00 0.00 5.69
3033 4700 2.277628 CGAGAGAGAAGCGGTCGC 60.278 66.667 7.32 7.32 42.33 5.19
3034 4701 2.405594 CCGAGAGAGAAGCGGTCG 59.594 66.667 0.00 0.00 40.17 4.79
3035 4702 2.103340 GCCGAGAGAGAAGCGGTC 59.897 66.667 0.00 0.00 46.38 4.79
3036 4703 3.453679 GGCCGAGAGAGAAGCGGT 61.454 66.667 0.00 0.00 46.38 5.68
3038 4705 3.132481 GAGGGCCGAGAGAGAAGCG 62.132 68.421 0.00 0.00 0.00 4.68
3039 4706 2.055042 TGAGGGCCGAGAGAGAAGC 61.055 63.158 0.00 0.00 0.00 3.86
3040 4707 1.671901 GGTGAGGGCCGAGAGAGAAG 61.672 65.000 0.00 0.00 0.00 2.85
3041 4708 1.682684 GGTGAGGGCCGAGAGAGAA 60.683 63.158 0.00 0.00 0.00 2.87
3042 4709 2.043852 GGTGAGGGCCGAGAGAGA 60.044 66.667 0.00 0.00 0.00 3.10
3043 4710 0.468214 TATGGTGAGGGCCGAGAGAG 60.468 60.000 0.00 0.00 0.00 3.20
3044 4711 0.468214 CTATGGTGAGGGCCGAGAGA 60.468 60.000 0.00 0.00 0.00 3.10
3045 4712 2.045280 CTATGGTGAGGGCCGAGAG 58.955 63.158 0.00 0.00 0.00 3.20
3046 4713 2.134287 GCTATGGTGAGGGCCGAGA 61.134 63.158 0.00 0.00 0.00 4.04
3047 4714 2.093537 GAGCTATGGTGAGGGCCGAG 62.094 65.000 0.00 0.00 0.00 4.63
3048 4715 2.041922 AGCTATGGTGAGGGCCGA 60.042 61.111 0.00 0.00 0.00 5.54
3049 4716 2.423446 GAGCTATGGTGAGGGCCG 59.577 66.667 0.00 0.00 0.00 6.13
3050 4717 2.072487 TGGAGCTATGGTGAGGGCC 61.072 63.158 0.00 0.00 0.00 5.80
3051 4718 1.147153 GTGGAGCTATGGTGAGGGC 59.853 63.158 0.00 0.00 0.00 5.19
3052 4719 0.911769 TTGTGGAGCTATGGTGAGGG 59.088 55.000 0.00 0.00 0.00 4.30
3053 4720 2.749621 GTTTTGTGGAGCTATGGTGAGG 59.250 50.000 0.00 0.00 0.00 3.86
3054 4721 3.679389 AGTTTTGTGGAGCTATGGTGAG 58.321 45.455 0.00 0.00 0.00 3.51
3055 4722 3.788227 AGTTTTGTGGAGCTATGGTGA 57.212 42.857 0.00 0.00 0.00 4.02
3056 4723 3.689649 GGTAGTTTTGTGGAGCTATGGTG 59.310 47.826 0.00 0.00 0.00 4.17
3057 4724 3.308188 GGGTAGTTTTGTGGAGCTATGGT 60.308 47.826 0.00 0.00 0.00 3.55
3058 4725 3.054361 AGGGTAGTTTTGTGGAGCTATGG 60.054 47.826 0.00 0.00 0.00 2.74
3059 4726 3.941483 CAGGGTAGTTTTGTGGAGCTATG 59.059 47.826 0.00 0.00 0.00 2.23
3060 4727 3.622455 GCAGGGTAGTTTTGTGGAGCTAT 60.622 47.826 0.00 0.00 0.00 2.97
3061 4728 2.290071 GCAGGGTAGTTTTGTGGAGCTA 60.290 50.000 0.00 0.00 0.00 3.32
3062 4729 1.545651 GCAGGGTAGTTTTGTGGAGCT 60.546 52.381 0.00 0.00 0.00 4.09
3063 4730 0.881796 GCAGGGTAGTTTTGTGGAGC 59.118 55.000 0.00 0.00 0.00 4.70
3064 4731 1.880027 GTGCAGGGTAGTTTTGTGGAG 59.120 52.381 0.00 0.00 0.00 3.86
3065 4732 1.477923 GGTGCAGGGTAGTTTTGTGGA 60.478 52.381 0.00 0.00 0.00 4.02
3066 4733 0.958822 GGTGCAGGGTAGTTTTGTGG 59.041 55.000 0.00 0.00 0.00 4.17
3067 4734 0.958822 GGGTGCAGGGTAGTTTTGTG 59.041 55.000 0.00 0.00 0.00 3.33
3068 4735 0.553819 TGGGTGCAGGGTAGTTTTGT 59.446 50.000 0.00 0.00 0.00 2.83
3069 4736 1.818674 GATGGGTGCAGGGTAGTTTTG 59.181 52.381 0.00 0.00 0.00 2.44
3070 4737 1.272480 GGATGGGTGCAGGGTAGTTTT 60.272 52.381 0.00 0.00 0.00 2.43
3071 4738 0.331616 GGATGGGTGCAGGGTAGTTT 59.668 55.000 0.00 0.00 0.00 2.66
3072 4739 0.550147 AGGATGGGTGCAGGGTAGTT 60.550 55.000 0.00 0.00 0.00 2.24
3073 4740 0.983378 GAGGATGGGTGCAGGGTAGT 60.983 60.000 0.00 0.00 0.00 2.73
3074 4741 1.832912 GAGGATGGGTGCAGGGTAG 59.167 63.158 0.00 0.00 0.00 3.18
3075 4742 2.063979 CGAGGATGGGTGCAGGGTA 61.064 63.158 0.00 0.00 0.00 3.69
3076 4743 3.402681 CGAGGATGGGTGCAGGGT 61.403 66.667 0.00 0.00 0.00 4.34
3077 4744 4.864334 GCGAGGATGGGTGCAGGG 62.864 72.222 0.00 0.00 0.00 4.45
3078 4745 4.864334 GGCGAGGATGGGTGCAGG 62.864 72.222 0.00 0.00 0.00 4.85
3082 4749 4.552365 ATGCGGCGAGGATGGGTG 62.552 66.667 12.98 0.00 0.00 4.61
3083 4750 4.241555 GATGCGGCGAGGATGGGT 62.242 66.667 12.98 0.00 0.00 4.51
3084 4751 3.644700 TATTGATGCGGCGAGGATGGG 62.645 57.143 12.98 0.00 0.00 4.00
3085 4752 0.320683 TATTGATGCGGCGAGGATGG 60.321 55.000 12.98 0.00 0.00 3.51
3086 4753 1.662629 GATATTGATGCGGCGAGGATG 59.337 52.381 12.98 0.00 0.00 3.51
3087 4754 1.552337 AGATATTGATGCGGCGAGGAT 59.448 47.619 12.98 0.00 0.00 3.24
3088 4755 0.969149 AGATATTGATGCGGCGAGGA 59.031 50.000 12.98 0.00 0.00 3.71
3089 4756 1.067283 AGAGATATTGATGCGGCGAGG 60.067 52.381 12.98 0.00 0.00 4.63
3090 4757 2.360553 AGAGATATTGATGCGGCGAG 57.639 50.000 12.98 0.00 0.00 5.03
3091 4758 2.407090 CAAGAGATATTGATGCGGCGA 58.593 47.619 12.98 0.00 31.55 5.54
3092 4759 1.136141 GCAAGAGATATTGATGCGGCG 60.136 52.381 0.51 0.51 31.55 6.46
3093 4760 2.095869 CAGCAAGAGATATTGATGCGGC 60.096 50.000 0.00 0.00 39.44 6.53
3094 4761 3.186001 GTCAGCAAGAGATATTGATGCGG 59.814 47.826 0.78 0.00 44.27 5.69
3095 4762 3.805971 TGTCAGCAAGAGATATTGATGCG 59.194 43.478 0.78 0.00 44.27 4.73
3096 4763 4.573607 TGTGTCAGCAAGAGATATTGATGC 59.426 41.667 0.78 0.00 44.27 3.91
3097 4764 6.673154 TTGTGTCAGCAAGAGATATTGATG 57.327 37.500 0.00 0.00 45.60 3.07
3098 4765 7.281098 AGATTGTGTCAGCAAGAGATATTGAT 58.719 34.615 0.00 0.00 31.55 2.57
3099 4766 6.647229 AGATTGTGTCAGCAAGAGATATTGA 58.353 36.000 0.00 0.00 31.55 2.57
3100 4767 6.018098 GGAGATTGTGTCAGCAAGAGATATTG 60.018 42.308 0.00 0.00 0.00 1.90
3101 4768 6.054295 GGAGATTGTGTCAGCAAGAGATATT 58.946 40.000 0.00 0.00 0.00 1.28
3102 4769 5.609423 GGAGATTGTGTCAGCAAGAGATAT 58.391 41.667 0.00 0.00 0.00 1.63
3103 4770 4.440663 CGGAGATTGTGTCAGCAAGAGATA 60.441 45.833 0.00 0.00 0.00 1.98
3104 4771 3.678252 CGGAGATTGTGTCAGCAAGAGAT 60.678 47.826 0.00 0.00 0.00 2.75
3105 4772 2.353109 CGGAGATTGTGTCAGCAAGAGA 60.353 50.000 0.00 0.00 0.00 3.10
3106 4773 1.998315 CGGAGATTGTGTCAGCAAGAG 59.002 52.381 0.00 0.00 0.00 2.85
3107 4774 1.618343 TCGGAGATTGTGTCAGCAAGA 59.382 47.619 0.00 0.00 0.00 3.02
3108 4775 1.728971 GTCGGAGATTGTGTCAGCAAG 59.271 52.381 0.00 0.00 40.67 4.01
3109 4776 1.795768 GTCGGAGATTGTGTCAGCAA 58.204 50.000 0.00 0.00 40.67 3.91
3110 4777 0.388520 CGTCGGAGATTGTGTCAGCA 60.389 55.000 0.00 0.00 40.67 4.41
3111 4778 0.388649 ACGTCGGAGATTGTGTCAGC 60.389 55.000 0.00 0.00 40.67 4.26
3112 4779 1.068541 TGACGTCGGAGATTGTGTCAG 60.069 52.381 11.62 0.00 40.67 3.51
3113 4780 0.955905 TGACGTCGGAGATTGTGTCA 59.044 50.000 11.62 0.00 40.67 3.58
3114 4781 1.618861 CTGACGTCGGAGATTGTGTC 58.381 55.000 20.01 0.00 40.67 3.67
3115 4782 0.388649 GCTGACGTCGGAGATTGTGT 60.389 55.000 28.38 0.00 40.67 3.72
3116 4783 1.078759 GGCTGACGTCGGAGATTGTG 61.079 60.000 28.38 2.28 40.67 3.33
3117 4784 1.215647 GGCTGACGTCGGAGATTGT 59.784 57.895 28.38 0.00 40.67 2.71
3118 4785 1.519455 GGGCTGACGTCGGAGATTG 60.519 63.158 28.38 4.65 40.67 2.67
3119 4786 2.722201 GGGGCTGACGTCGGAGATT 61.722 63.158 28.38 0.00 40.67 2.40
3120 4787 2.280404 TAGGGGCTGACGTCGGAGAT 62.280 60.000 28.38 12.10 40.67 2.75
3121 4788 2.975265 TAGGGGCTGACGTCGGAGA 61.975 63.158 28.38 0.14 0.00 3.71
3122 4789 2.439701 TAGGGGCTGACGTCGGAG 60.440 66.667 28.38 13.48 0.00 4.63
3123 4790 2.753043 GTAGGGGCTGACGTCGGA 60.753 66.667 28.38 3.34 0.00 4.55
3124 4791 2.351336 GATGTAGGGGCTGACGTCGG 62.351 65.000 20.35 20.35 0.00 4.79
3125 4792 1.065928 GATGTAGGGGCTGACGTCG 59.934 63.158 11.62 7.05 0.00 5.12
3126 4793 1.442148 GGATGTAGGGGCTGACGTC 59.558 63.158 9.11 9.11 0.00 4.34
3127 4794 2.064581 GGGATGTAGGGGCTGACGT 61.065 63.158 0.00 0.00 0.00 4.34
3128 4795 2.808206 GGGGATGTAGGGGCTGACG 61.808 68.421 0.00 0.00 0.00 4.35
3129 4796 1.062488 ATGGGGATGTAGGGGCTGAC 61.062 60.000 0.00 0.00 0.00 3.51
3130 4797 0.570727 TATGGGGATGTAGGGGCTGA 59.429 55.000 0.00 0.00 0.00 4.26
3131 4798 0.987294 CTATGGGGATGTAGGGGCTG 59.013 60.000 0.00 0.00 0.00 4.85
3132 4799 0.573279 ACTATGGGGATGTAGGGGCT 59.427 55.000 0.00 0.00 0.00 5.19
3133 4800 1.351350 GAACTATGGGGATGTAGGGGC 59.649 57.143 0.00 0.00 0.00 5.80
3134 4801 2.991580 AGAACTATGGGGATGTAGGGG 58.008 52.381 0.00 0.00 0.00 4.79
3135 4802 3.973973 TCAAGAACTATGGGGATGTAGGG 59.026 47.826 0.00 0.00 0.00 3.53
3136 4803 5.545723 AGATCAAGAACTATGGGGATGTAGG 59.454 44.000 0.00 0.00 0.00 3.18
3137 4804 6.571344 CGAGATCAAGAACTATGGGGATGTAG 60.571 46.154 0.00 0.00 0.00 2.74
3138 4805 5.243954 CGAGATCAAGAACTATGGGGATGTA 59.756 44.000 0.00 0.00 0.00 2.29
3139 4806 4.039730 CGAGATCAAGAACTATGGGGATGT 59.960 45.833 0.00 0.00 0.00 3.06
3140 4807 4.564041 CGAGATCAAGAACTATGGGGATG 58.436 47.826 0.00 0.00 0.00 3.51
3141 4808 3.007398 GCGAGATCAAGAACTATGGGGAT 59.993 47.826 0.00 0.00 0.00 3.85
3142 4809 2.365617 GCGAGATCAAGAACTATGGGGA 59.634 50.000 0.00 0.00 0.00 4.81
3143 4810 2.548920 GGCGAGATCAAGAACTATGGGG 60.549 54.545 0.00 0.00 0.00 4.96
3144 4811 2.760374 GGCGAGATCAAGAACTATGGG 58.240 52.381 0.00 0.00 0.00 4.00
3145 4812 2.398498 CGGCGAGATCAAGAACTATGG 58.602 52.381 0.00 0.00 0.00 2.74
3146 4813 1.789464 GCGGCGAGATCAAGAACTATG 59.211 52.381 12.98 0.00 0.00 2.23
3147 4814 1.269831 GGCGGCGAGATCAAGAACTAT 60.270 52.381 12.98 0.00 0.00 2.12
3148 4815 0.102481 GGCGGCGAGATCAAGAACTA 59.898 55.000 12.98 0.00 0.00 2.24
3149 4816 1.153549 GGCGGCGAGATCAAGAACT 60.154 57.895 12.98 0.00 0.00 3.01
3150 4817 2.174319 GGGCGGCGAGATCAAGAAC 61.174 63.158 12.98 0.00 0.00 3.01
3151 4818 1.971505 ATGGGCGGCGAGATCAAGAA 61.972 55.000 12.98 0.00 0.00 2.52
3152 4819 1.112916 TATGGGCGGCGAGATCAAGA 61.113 55.000 12.98 0.00 0.00 3.02
3153 4820 0.249868 TTATGGGCGGCGAGATCAAG 60.250 55.000 12.98 0.00 0.00 3.02
3154 4821 0.531974 GTTATGGGCGGCGAGATCAA 60.532 55.000 12.98 0.00 0.00 2.57
3155 4822 1.069090 GTTATGGGCGGCGAGATCA 59.931 57.895 12.98 2.35 0.00 2.92
3156 4823 0.601558 TAGTTATGGGCGGCGAGATC 59.398 55.000 12.98 0.00 0.00 2.75
3157 4824 0.317479 GTAGTTATGGGCGGCGAGAT 59.683 55.000 12.98 0.34 0.00 2.75
3158 4825 0.754217 AGTAGTTATGGGCGGCGAGA 60.754 55.000 12.98 0.00 0.00 4.04
3159 4826 0.956633 TAGTAGTTATGGGCGGCGAG 59.043 55.000 12.98 0.00 0.00 5.03
3160 4827 0.670162 GTAGTAGTTATGGGCGGCGA 59.330 55.000 12.98 0.00 0.00 5.54
3161 4828 0.319297 GGTAGTAGTTATGGGCGGCG 60.319 60.000 0.51 0.51 0.00 6.46
3162 4829 0.754472 TGGTAGTAGTTATGGGCGGC 59.246 55.000 0.00 0.00 0.00 6.53
3163 4830 3.399330 CAATGGTAGTAGTTATGGGCGG 58.601 50.000 0.00 0.00 0.00 6.13
3164 4831 3.070446 TCCAATGGTAGTAGTTATGGGCG 59.930 47.826 0.00 0.00 0.00 6.13
3165 4832 4.347000 TCTCCAATGGTAGTAGTTATGGGC 59.653 45.833 0.00 0.00 0.00 5.36
3166 4833 5.365605 TGTCTCCAATGGTAGTAGTTATGGG 59.634 44.000 0.00 0.00 0.00 4.00
3167 4834 6.479972 TGTCTCCAATGGTAGTAGTTATGG 57.520 41.667 0.00 0.00 0.00 2.74
3168 4835 7.957002 AGATGTCTCCAATGGTAGTAGTTATG 58.043 38.462 0.00 0.00 0.00 1.90
3169 4836 8.007742 AGAGATGTCTCCAATGGTAGTAGTTAT 58.992 37.037 6.41 0.00 43.88 1.89
3170 4837 7.355101 AGAGATGTCTCCAATGGTAGTAGTTA 58.645 38.462 6.41 0.00 43.88 2.24
3171 4838 6.198639 AGAGATGTCTCCAATGGTAGTAGTT 58.801 40.000 6.41 0.00 43.88 2.24
3172 4839 5.772004 AGAGATGTCTCCAATGGTAGTAGT 58.228 41.667 6.41 0.00 43.88 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.