Multiple sequence alignment - TraesCS3D01G419700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G419700 chr3D 100.000 3481 0 0 1 3481 532168574 532172054 0.000000e+00 6429.0
1 TraesCS3D01G419700 chr3D 83.015 471 50 18 1810 2260 532155915 532156375 1.950000e-107 399.0
2 TraesCS3D01G419700 chr3D 79.258 593 90 21 767 1349 532153585 532154154 1.960000e-102 383.0
3 TraesCS3D01G419700 chr3D 80.549 437 56 16 884 1312 532104611 532105026 3.370000e-80 309.0
4 TraesCS3D01G419700 chr3D 93.237 207 12 2 3261 3465 580908870 580909076 1.570000e-78 303.0
5 TraesCS3D01G419700 chr3D 96.196 184 7 0 345 528 68388301 68388118 5.650000e-78 302.0
6 TraesCS3D01G419700 chr3D 84.190 253 37 3 2006 2256 532105473 532105724 3.470000e-60 243.0
7 TraesCS3D01G419700 chr3D 85.311 177 11 5 1398 1566 532154327 532154496 5.980000e-38 169.0
8 TraesCS3D01G419700 chr3D 98.077 52 1 0 3145 3196 532171668 532171719 1.330000e-14 91.6
9 TraesCS3D01G419700 chr3D 98.077 52 1 0 3095 3146 532171718 532171769 1.330000e-14 91.6
10 TraesCS3D01G419700 chr3D 89.855 69 7 0 3145 3213 135868941 135868873 4.790000e-14 89.8
11 TraesCS3D01G419700 chr3D 94.545 55 3 0 1679 1733 532155834 532155888 6.190000e-13 86.1
12 TraesCS3D01G419700 chr3D 84.507 71 4 3 3145 3208 545672314 545672384 2.900000e-06 63.9
13 TraesCS3D01G419700 chr3A 88.961 1386 82 24 1810 3146 667353897 667355260 0.000000e+00 1646.0
14 TraesCS3D01G419700 chr3A 93.412 759 32 9 680 1436 667352961 667353703 0.000000e+00 1109.0
15 TraesCS3D01G419700 chr3A 82.281 570 57 27 1810 2357 667345457 667346004 1.470000e-123 453.0
16 TraesCS3D01G419700 chr3A 81.106 434 58 16 884 1312 667132031 667132445 3.350000e-85 326.0
17 TraesCS3D01G419700 chr3A 78.125 544 97 15 801 1340 667314488 667315013 3.350000e-85 326.0
18 TraesCS3D01G419700 chr3A 91.866 209 14 3 3260 3465 77769076 77768868 4.400000e-74 289.0
19 TraesCS3D01G419700 chr3A 91.388 209 15 3 3260 3465 77728462 77728254 2.050000e-72 283.0
20 TraesCS3D01G419700 chr3A 85.057 261 37 2 2007 2266 667132888 667133147 7.410000e-67 265.0
21 TraesCS3D01G419700 chr3A 95.283 106 5 0 73 178 667351064 667351169 5.980000e-38 169.0
22 TraesCS3D01G419700 chr3A 98.571 70 1 0 176 245 667351193 667351262 1.310000e-24 124.0
23 TraesCS3D01G419700 chr3A 91.176 68 5 1 3145 3212 495012067 495012133 1.330000e-14 91.6
24 TraesCS3D01G419700 chr3A 81.633 98 17 1 2862 2958 743533678 743533581 2.880000e-11 80.5
25 TraesCS3D01G419700 chr3B 88.506 1392 93 25 1789 3130 704324524 704325898 0.000000e+00 1622.0
26 TraesCS3D01G419700 chr3B 91.575 724 38 13 797 1518 704323633 704324335 0.000000e+00 977.0
27 TraesCS3D01G419700 chr3B 83.227 471 51 17 1810 2260 704311782 704312244 1.160000e-109 407.0
28 TraesCS3D01G419700 chr3B 89.003 291 20 5 73 351 704323034 704323324 1.990000e-92 350.0
29 TraesCS3D01G419700 chr3B 77.609 594 100 22 767 1349 704309531 704310102 2.590000e-86 329.0
30 TraesCS3D01G419700 chr3B 80.092 437 66 14 884 1312 704108905 704109328 4.370000e-79 305.0
31 TraesCS3D01G419700 chr3B 90.047 211 16 4 3261 3469 519860656 519860863 5.730000e-68 268.0
32 TraesCS3D01G419700 chr3B 84.411 263 37 4 2006 2266 704025597 704025857 4.460000e-64 255.0
33 TraesCS3D01G419700 chr3B 83.817 241 35 4 2018 2256 704109737 704109975 3.500000e-55 226.0
34 TraesCS3D01G419700 chr3B 87.302 126 5 5 3145 3262 704325863 704325985 2.180000e-27 134.0
35 TraesCS3D01G419700 chr3B 91.176 68 6 0 3145 3212 306576451 306576384 3.700000e-15 93.5
36 TraesCS3D01G419700 chr3B 88.158 76 8 1 3139 3213 669331070 669330995 4.790000e-14 89.8
37 TraesCS3D01G419700 chr3B 93.220 59 4 0 1679 1737 704311701 704311759 1.720000e-13 87.9
38 TraesCS3D01G419700 chr3B 82.667 75 7 4 884 955 704024776 704024847 1.040000e-05 62.1
39 TraesCS3D01G419700 chr2D 96.970 198 5 1 335 532 170450770 170450574 7.200000e-87 331.0
40 TraesCS3D01G419700 chr5A 96.825 189 6 0 343 531 448995859 448995671 2.020000e-82 316.0
41 TraesCS3D01G419700 chr5A 89.407 236 18 5 3251 3481 115095113 115095346 1.220000e-74 291.0
42 TraesCS3D01G419700 chr4D 96.257 187 7 0 345 531 75786105 75785919 1.210000e-79 307.0
43 TraesCS3D01G419700 chr7A 95.767 189 8 0 343 531 120090333 120090521 4.370000e-79 305.0
44 TraesCS3D01G419700 chr7A 95.213 188 9 0 343 530 120060106 120060293 7.300000e-77 298.0
45 TraesCS3D01G419700 chr7A 90.476 210 15 5 3260 3465 460292167 460291959 4.430000e-69 272.0
46 TraesCS3D01G419700 chr7A 97.561 41 1 0 3090 3130 355686882 355686842 1.730000e-08 71.3
47 TraesCS3D01G419700 chr1A 94.737 190 8 2 342 530 301554512 301554324 9.450000e-76 294.0
48 TraesCS3D01G419700 chr1A 91.667 48 4 0 3087 3134 11897637 11897684 2.240000e-07 67.6
49 TraesCS3D01G419700 chr2A 94.271 192 10 1 343 534 595540397 595540207 3.400000e-75 292.0
50 TraesCS3D01G419700 chr2A 87.500 64 5 2 3145 3205 465366924 465366987 1.730000e-08 71.3
51 TraesCS3D01G419700 chr5D 93.782 193 12 0 349 541 327612985 327613177 1.220000e-74 291.0
52 TraesCS3D01G419700 chr5B 89.362 235 19 5 3251 3481 121249490 121249722 1.220000e-74 291.0
53 TraesCS3D01G419700 chr7B 89.524 210 13 7 3260 3465 411779519 411779315 1.240000e-64 257.0
54 TraesCS3D01G419700 chr7B 95.455 44 2 0 3091 3134 403564370 403564413 1.730000e-08 71.3
55 TraesCS3D01G419700 chr7B 95.455 44 2 0 3091 3134 403730220 403730263 1.730000e-08 71.3
56 TraesCS3D01G419700 chr7B 97.500 40 1 0 3091 3130 407941060 407941099 6.230000e-08 69.4
57 TraesCS3D01G419700 chr4B 87.225 227 20 8 3256 3480 166765512 166765731 2.070000e-62 250.0
58 TraesCS3D01G419700 chr6D 91.304 69 6 0 3145 3213 211444019 211443951 1.030000e-15 95.3
59 TraesCS3D01G419700 chr4A 82.000 100 17 1 2860 2958 612401294 612401393 2.230000e-12 84.2
60 TraesCS3D01G419700 chrUn 95.455 44 2 0 3091 3134 478179663 478179620 1.730000e-08 71.3
61 TraesCS3D01G419700 chr6A 83.582 67 5 2 3145 3205 430337002 430337068 1.350000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G419700 chr3D 532168574 532172054 3480 False 2204.066667 6429 98.718000 1 3481 3 chr3D.!!$F5 3480
1 TraesCS3D01G419700 chr3D 532104611 532105724 1113 False 276.000000 309 82.369500 884 2256 2 chr3D.!!$F3 1372
2 TraesCS3D01G419700 chr3D 532153585 532156375 2790 False 259.275000 399 85.532250 767 2260 4 chr3D.!!$F4 1493
3 TraesCS3D01G419700 chr3A 667351064 667355260 4196 False 762.000000 1646 94.056750 73 3146 4 chr3A.!!$F5 3073
4 TraesCS3D01G419700 chr3A 667345457 667346004 547 False 453.000000 453 82.281000 1810 2357 1 chr3A.!!$F3 547
5 TraesCS3D01G419700 chr3A 667314488 667315013 525 False 326.000000 326 78.125000 801 1340 1 chr3A.!!$F2 539
6 TraesCS3D01G419700 chr3A 667132031 667133147 1116 False 295.500000 326 83.081500 884 2266 2 chr3A.!!$F4 1382
7 TraesCS3D01G419700 chr3B 704323034 704325985 2951 False 770.750000 1622 89.096500 73 3262 4 chr3B.!!$F5 3189
8 TraesCS3D01G419700 chr3B 704309531 704312244 2713 False 274.633333 407 84.685333 767 2260 3 chr3B.!!$F4 1493
9 TraesCS3D01G419700 chr3B 704108905 704109975 1070 False 265.500000 305 81.954500 884 2256 2 chr3B.!!$F3 1372

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
782 2288 0.094216 CACAAGAAGATCGCGCTGTG 59.906 55.0 5.56 6.81 0.0 3.66 F
950 2476 0.106967 GCCATTGTTCCTCCCCTCTC 60.107 60.0 0.00 0.00 0.0 3.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2420 5467 1.153823 ATCTCGTGTCCGCTTTCCG 60.154 57.895 0.0 0.0 0.0 4.30 R
2686 5736 1.809547 TGGCATCATACAAACACACCG 59.190 47.619 0.0 0.0 0.0 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 3.033764 GTGCGCGACCTTGACGAA 61.034 61.111 12.10 0.00 0.00 3.85
37 38 3.033764 TGCGCGACCTTGACGAAC 61.034 61.111 12.10 0.00 0.00 3.95
38 39 4.117372 GCGCGACCTTGACGAACG 62.117 66.667 12.10 0.00 0.00 3.95
39 40 4.117372 CGCGACCTTGACGAACGC 62.117 66.667 0.00 0.00 44.64 4.84
40 41 2.733593 GCGACCTTGACGAACGCT 60.734 61.111 0.00 0.00 44.67 5.07
41 42 1.443194 GCGACCTTGACGAACGCTA 60.443 57.895 0.00 0.00 44.67 4.26
42 43 1.403972 GCGACCTTGACGAACGCTAG 61.404 60.000 0.00 0.00 44.67 3.42
43 44 1.403972 CGACCTTGACGAACGCTAGC 61.404 60.000 4.06 4.06 0.00 3.42
44 45 1.077089 GACCTTGACGAACGCTAGCC 61.077 60.000 9.66 0.00 0.00 3.93
45 46 2.158959 CCTTGACGAACGCTAGCCG 61.159 63.158 9.66 9.78 44.21 5.52
140 141 0.790207 CTTTTAGCTGCGTTCGAGCA 59.210 50.000 0.00 0.00 45.96 4.26
141 142 1.394917 CTTTTAGCTGCGTTCGAGCAT 59.605 47.619 0.00 0.00 46.97 3.79
146 147 1.808799 CTGCGTTCGAGCATGCTCT 60.809 57.895 37.44 12.83 46.97 4.09
280 345 8.598075 ACATCAACGATTCGGTTTATAACTTAC 58.402 33.333 11.29 0.00 0.00 2.34
291 356 6.372981 GGTTTATAACTTACCAAACCGTGTG 58.627 40.000 9.55 0.00 40.22 3.82
293 358 1.752683 AACTTACCAAACCGTGTGCA 58.247 45.000 0.00 0.00 0.00 4.57
302 367 0.951558 AACCGTGTGCAATTCTGGAC 59.048 50.000 0.00 0.00 43.80 4.02
351 416 0.809241 CAGCGAGCTCTAAGGCCTTG 60.809 60.000 28.77 17.30 0.00 3.61
353 418 0.460311 GCGAGCTCTAAGGCCTTGTA 59.540 55.000 28.77 14.41 0.00 2.41
355 420 1.476891 CGAGCTCTAAGGCCTTGTACA 59.523 52.381 28.77 6.91 0.00 2.90
356 421 2.094182 CGAGCTCTAAGGCCTTGTACAA 60.094 50.000 28.77 8.28 0.00 2.41
357 422 3.430929 CGAGCTCTAAGGCCTTGTACAAT 60.431 47.826 28.77 9.37 0.00 2.71
358 423 3.873952 GAGCTCTAAGGCCTTGTACAATG 59.126 47.826 28.77 7.68 0.00 2.82
359 424 2.945668 GCTCTAAGGCCTTGTACAATGG 59.054 50.000 28.77 13.26 0.00 3.16
360 425 3.545703 CTCTAAGGCCTTGTACAATGGG 58.454 50.000 28.77 14.91 0.00 4.00
361 426 3.186283 TCTAAGGCCTTGTACAATGGGA 58.814 45.455 28.77 2.40 0.00 4.37
362 427 2.514458 AAGGCCTTGTACAATGGGAG 57.486 50.000 19.73 1.65 0.00 4.30
363 428 1.668826 AGGCCTTGTACAATGGGAGA 58.331 50.000 16.08 0.00 0.00 3.71
364 429 2.208872 AGGCCTTGTACAATGGGAGAT 58.791 47.619 16.08 0.53 0.00 2.75
365 430 2.092212 AGGCCTTGTACAATGGGAGATG 60.092 50.000 16.08 0.00 0.00 2.90
366 431 1.678101 GCCTTGTACAATGGGAGATGC 59.322 52.381 16.08 3.76 0.00 3.91
367 432 2.684927 GCCTTGTACAATGGGAGATGCT 60.685 50.000 16.08 0.00 0.00 3.79
368 433 3.624777 CCTTGTACAATGGGAGATGCTT 58.375 45.455 9.13 0.00 0.00 3.91
369 434 4.780815 CCTTGTACAATGGGAGATGCTTA 58.219 43.478 9.13 0.00 0.00 3.09
370 435 4.818546 CCTTGTACAATGGGAGATGCTTAG 59.181 45.833 9.13 0.00 0.00 2.18
371 436 5.396772 CCTTGTACAATGGGAGATGCTTAGA 60.397 44.000 9.13 0.00 0.00 2.10
372 437 5.282055 TGTACAATGGGAGATGCTTAGAG 57.718 43.478 0.00 0.00 0.00 2.43
373 438 3.853355 ACAATGGGAGATGCTTAGAGG 57.147 47.619 0.00 0.00 0.00 3.69
374 439 3.387962 ACAATGGGAGATGCTTAGAGGA 58.612 45.455 0.00 0.00 0.00 3.71
375 440 3.390639 ACAATGGGAGATGCTTAGAGGAG 59.609 47.826 0.00 0.00 0.00 3.69
376 441 2.856760 TGGGAGATGCTTAGAGGAGT 57.143 50.000 0.00 0.00 0.00 3.85
377 442 2.392662 TGGGAGATGCTTAGAGGAGTG 58.607 52.381 0.00 0.00 0.00 3.51
378 443 1.069978 GGGAGATGCTTAGAGGAGTGC 59.930 57.143 0.00 0.00 0.00 4.40
379 444 2.038659 GGAGATGCTTAGAGGAGTGCT 58.961 52.381 0.00 0.00 0.00 4.40
380 445 2.433970 GGAGATGCTTAGAGGAGTGCTT 59.566 50.000 0.00 0.00 0.00 3.91
381 446 3.639094 GGAGATGCTTAGAGGAGTGCTTA 59.361 47.826 0.00 0.00 0.00 3.09
382 447 4.261994 GGAGATGCTTAGAGGAGTGCTTAG 60.262 50.000 0.00 0.00 0.00 2.18
383 448 4.541705 AGATGCTTAGAGGAGTGCTTAGA 58.458 43.478 0.00 0.00 0.00 2.10
384 449 4.959210 AGATGCTTAGAGGAGTGCTTAGAA 59.041 41.667 0.00 0.00 0.00 2.10
385 450 5.423610 AGATGCTTAGAGGAGTGCTTAGAAA 59.576 40.000 0.00 0.00 0.00 2.52
386 451 5.483685 TGCTTAGAGGAGTGCTTAGAAAA 57.516 39.130 0.00 0.00 0.00 2.29
387 452 5.865085 TGCTTAGAGGAGTGCTTAGAAAAA 58.135 37.500 0.00 0.00 0.00 1.94
388 453 6.476378 TGCTTAGAGGAGTGCTTAGAAAAAT 58.524 36.000 0.00 0.00 0.00 1.82
389 454 7.620880 TGCTTAGAGGAGTGCTTAGAAAAATA 58.379 34.615 0.00 0.00 0.00 1.40
390 455 8.100791 TGCTTAGAGGAGTGCTTAGAAAAATAA 58.899 33.333 0.00 0.00 0.00 1.40
391 456 8.947115 GCTTAGAGGAGTGCTTAGAAAAATAAA 58.053 33.333 0.00 0.00 0.00 1.40
393 458 7.689446 AGAGGAGTGCTTAGAAAAATAAACC 57.311 36.000 0.00 0.00 0.00 3.27
394 459 6.371825 AGAGGAGTGCTTAGAAAAATAAACCG 59.628 38.462 0.00 0.00 0.00 4.44
395 460 6.235664 AGGAGTGCTTAGAAAAATAAACCGA 58.764 36.000 0.00 0.00 0.00 4.69
396 461 6.371825 AGGAGTGCTTAGAAAAATAAACCGAG 59.628 38.462 0.00 0.00 0.00 4.63
397 462 6.370718 GGAGTGCTTAGAAAAATAAACCGAGA 59.629 38.462 0.00 0.00 0.00 4.04
398 463 7.065923 GGAGTGCTTAGAAAAATAAACCGAGAT 59.934 37.037 0.00 0.00 0.00 2.75
399 464 8.336801 AGTGCTTAGAAAAATAAACCGAGATT 57.663 30.769 0.00 0.00 0.00 2.40
400 465 8.793592 AGTGCTTAGAAAAATAAACCGAGATTT 58.206 29.630 0.00 0.00 0.00 2.17
401 466 9.406828 GTGCTTAGAAAAATAAACCGAGATTTT 57.593 29.630 0.00 0.00 36.94 1.82
402 467 9.620660 TGCTTAGAAAAATAAACCGAGATTTTC 57.379 29.630 0.00 0.00 39.23 2.29
403 468 9.841880 GCTTAGAAAAATAAACCGAGATTTTCT 57.158 29.630 14.07 14.07 46.39 2.52
407 472 9.899226 AGAAAAATAAACCGAGATTTTCTGAAG 57.101 29.630 10.10 0.00 44.34 3.02
408 473 8.520835 AAAAATAAACCGAGATTTTCTGAAGC 57.479 30.769 0.00 0.00 34.86 3.86
409 474 6.817765 AATAAACCGAGATTTTCTGAAGCA 57.182 33.333 0.00 0.00 0.00 3.91
410 475 4.489679 AAACCGAGATTTTCTGAAGCAC 57.510 40.909 0.00 0.00 0.00 4.40
411 476 2.427506 ACCGAGATTTTCTGAAGCACC 58.572 47.619 0.00 0.00 0.00 5.01
412 477 1.394917 CCGAGATTTTCTGAAGCACCG 59.605 52.381 0.00 0.00 0.00 4.94
413 478 1.394917 CGAGATTTTCTGAAGCACCGG 59.605 52.381 0.00 0.00 0.00 5.28
414 479 2.427506 GAGATTTTCTGAAGCACCGGT 58.572 47.619 0.00 0.00 0.00 5.28
415 480 2.154462 AGATTTTCTGAAGCACCGGTG 58.846 47.619 30.66 30.66 0.00 4.94
427 492 2.684001 CACCGGTGCCTATTTCTACA 57.316 50.000 24.02 0.00 0.00 2.74
428 493 2.550978 CACCGGTGCCTATTTCTACAG 58.449 52.381 24.02 0.00 0.00 2.74
429 494 1.485066 ACCGGTGCCTATTTCTACAGG 59.515 52.381 6.12 0.00 35.04 4.00
430 495 1.760613 CCGGTGCCTATTTCTACAGGA 59.239 52.381 0.00 0.00 33.42 3.86
431 496 2.224066 CCGGTGCCTATTTCTACAGGAG 60.224 54.545 0.00 0.00 33.42 3.69
432 497 2.693591 CGGTGCCTATTTCTACAGGAGA 59.306 50.000 0.00 0.00 33.42 3.71
433 498 3.243569 CGGTGCCTATTTCTACAGGAGAG 60.244 52.174 0.00 0.00 34.93 3.20
434 499 3.961408 GGTGCCTATTTCTACAGGAGAGA 59.039 47.826 0.00 0.00 34.93 3.10
435 500 4.202172 GGTGCCTATTTCTACAGGAGAGAC 60.202 50.000 0.00 0.00 34.93 3.36
436 501 3.632604 TGCCTATTTCTACAGGAGAGACG 59.367 47.826 0.00 0.00 34.93 4.18
437 502 3.551250 GCCTATTTCTACAGGAGAGACGC 60.551 52.174 0.00 0.00 34.93 5.19
438 503 3.886505 CCTATTTCTACAGGAGAGACGCT 59.113 47.826 0.00 0.00 34.93 5.07
439 504 4.339814 CCTATTTCTACAGGAGAGACGCTT 59.660 45.833 0.00 0.00 34.93 4.68
440 505 5.531659 CCTATTTCTACAGGAGAGACGCTTA 59.468 44.000 0.00 0.00 34.93 3.09
441 506 4.966965 TTTCTACAGGAGAGACGCTTAG 57.033 45.455 0.00 0.00 34.93 2.18
442 507 3.630892 TCTACAGGAGAGACGCTTAGT 57.369 47.619 0.00 0.00 0.00 2.24
443 508 3.952931 TCTACAGGAGAGACGCTTAGTT 58.047 45.455 0.00 0.00 0.00 2.24
444 509 5.095145 TCTACAGGAGAGACGCTTAGTTA 57.905 43.478 0.00 0.00 0.00 2.24
445 510 5.494724 TCTACAGGAGAGACGCTTAGTTAA 58.505 41.667 0.00 0.00 0.00 2.01
446 511 4.705337 ACAGGAGAGACGCTTAGTTAAG 57.295 45.455 0.00 0.00 36.40 1.85
447 512 9.223557 TTCTACAGGAGAGACGCTTAGTTAAGC 62.224 44.444 12.72 12.72 44.08 3.09
458 523 4.715527 CTTAGTTAAGCGTCTACCCTGT 57.284 45.455 0.00 0.00 0.00 4.00
459 524 5.824904 CTTAGTTAAGCGTCTACCCTGTA 57.175 43.478 0.00 0.00 0.00 2.74
460 525 5.567138 TTAGTTAAGCGTCTACCCTGTAC 57.433 43.478 0.00 0.00 0.00 2.90
461 526 3.424703 AGTTAAGCGTCTACCCTGTACA 58.575 45.455 0.00 0.00 0.00 2.90
462 527 3.828451 AGTTAAGCGTCTACCCTGTACAA 59.172 43.478 0.00 0.00 0.00 2.41
463 528 4.281688 AGTTAAGCGTCTACCCTGTACAAA 59.718 41.667 0.00 0.00 0.00 2.83
464 529 3.975168 AAGCGTCTACCCTGTACAAAT 57.025 42.857 0.00 0.00 0.00 2.32
465 530 6.153340 AGTTAAGCGTCTACCCTGTACAAATA 59.847 38.462 0.00 0.00 0.00 1.40
466 531 5.410355 AAGCGTCTACCCTGTACAAATAA 57.590 39.130 0.00 0.00 0.00 1.40
467 532 5.007385 AGCGTCTACCCTGTACAAATAAG 57.993 43.478 0.00 0.00 0.00 1.73
468 533 3.554731 GCGTCTACCCTGTACAAATAAGC 59.445 47.826 0.00 0.00 0.00 3.09
469 534 4.751060 CGTCTACCCTGTACAAATAAGCA 58.249 43.478 0.00 0.00 0.00 3.91
470 535 4.565564 CGTCTACCCTGTACAAATAAGCAC 59.434 45.833 0.00 0.00 0.00 4.40
471 536 4.874396 GTCTACCCTGTACAAATAAGCACC 59.126 45.833 0.00 0.00 0.00 5.01
472 537 2.706890 ACCCTGTACAAATAAGCACCG 58.293 47.619 0.00 0.00 0.00 4.94
473 538 2.303600 ACCCTGTACAAATAAGCACCGA 59.696 45.455 0.00 0.00 0.00 4.69
474 539 3.054655 ACCCTGTACAAATAAGCACCGAT 60.055 43.478 0.00 0.00 0.00 4.18
475 540 3.312421 CCCTGTACAAATAAGCACCGATG 59.688 47.826 0.00 0.00 0.00 3.84
489 554 3.600388 CACCGATGCTTAAGGAAAGTCT 58.400 45.455 0.00 0.00 37.53 3.24
490 555 3.372206 CACCGATGCTTAAGGAAAGTCTG 59.628 47.826 0.00 0.00 37.53 3.51
491 556 2.939103 CCGATGCTTAAGGAAAGTCTGG 59.061 50.000 0.00 0.00 37.53 3.86
492 557 3.600388 CGATGCTTAAGGAAAGTCTGGT 58.400 45.455 0.00 0.00 37.53 4.00
493 558 4.003648 CGATGCTTAAGGAAAGTCTGGTT 58.996 43.478 0.00 0.00 37.53 3.67
494 559 4.455877 CGATGCTTAAGGAAAGTCTGGTTT 59.544 41.667 0.00 0.00 37.53 3.27
495 560 5.642063 CGATGCTTAAGGAAAGTCTGGTTTA 59.358 40.000 0.00 0.00 37.53 2.01
496 561 6.316390 CGATGCTTAAGGAAAGTCTGGTTTAT 59.684 38.462 0.00 0.00 37.53 1.40
497 562 7.148239 CGATGCTTAAGGAAAGTCTGGTTTATT 60.148 37.037 0.00 0.00 37.53 1.40
498 563 7.833285 TGCTTAAGGAAAGTCTGGTTTATTT 57.167 32.000 4.29 0.00 37.53 1.40
499 564 7.882179 TGCTTAAGGAAAGTCTGGTTTATTTC 58.118 34.615 4.29 0.00 37.53 2.17
500 565 7.724061 TGCTTAAGGAAAGTCTGGTTTATTTCT 59.276 33.333 4.29 0.00 37.53 2.52
501 566 8.237949 GCTTAAGGAAAGTCTGGTTTATTTCTC 58.762 37.037 4.29 0.00 37.53 2.87
502 567 9.508642 CTTAAGGAAAGTCTGGTTTATTTCTCT 57.491 33.333 0.00 0.00 33.25 3.10
505 570 9.508642 AAGGAAAGTCTGGTTTATTTCTCTAAG 57.491 33.333 0.00 0.00 33.25 2.18
506 571 7.608376 AGGAAAGTCTGGTTTATTTCTCTAAGC 59.392 37.037 0.00 0.00 33.25 3.09
507 572 7.390718 GGAAAGTCTGGTTTATTTCTCTAAGCA 59.609 37.037 0.00 0.00 33.25 3.91
508 573 7.674471 AAGTCTGGTTTATTTCTCTAAGCAC 57.326 36.000 0.00 0.00 0.00 4.40
509 574 6.174049 AGTCTGGTTTATTTCTCTAAGCACC 58.826 40.000 0.00 0.00 0.00 5.01
510 575 6.013293 AGTCTGGTTTATTTCTCTAAGCACCT 60.013 38.462 0.00 0.00 0.00 4.00
511 576 6.314152 GTCTGGTTTATTTCTCTAAGCACCTC 59.686 42.308 0.00 0.00 0.00 3.85
512 577 5.497474 TGGTTTATTTCTCTAAGCACCTCC 58.503 41.667 0.00 0.00 0.00 4.30
513 578 4.882427 GGTTTATTTCTCTAAGCACCTCCC 59.118 45.833 0.00 0.00 0.00 4.30
514 579 5.497474 GTTTATTTCTCTAAGCACCTCCCA 58.503 41.667 0.00 0.00 0.00 4.37
515 580 5.975988 TTATTTCTCTAAGCACCTCCCAT 57.024 39.130 0.00 0.00 0.00 4.00
516 581 4.870021 ATTTCTCTAAGCACCTCCCATT 57.130 40.909 0.00 0.00 0.00 3.16
517 582 3.634397 TTCTCTAAGCACCTCCCATTG 57.366 47.619 0.00 0.00 0.00 2.82
518 583 2.551270 TCTCTAAGCACCTCCCATTGT 58.449 47.619 0.00 0.00 0.00 2.71
519 584 3.719871 TCTCTAAGCACCTCCCATTGTA 58.280 45.455 0.00 0.00 0.00 2.41
520 585 3.451178 TCTCTAAGCACCTCCCATTGTAC 59.549 47.826 0.00 0.00 0.00 2.90
521 586 3.178046 TCTAAGCACCTCCCATTGTACA 58.822 45.455 0.00 0.00 0.00 2.90
522 587 2.969821 AAGCACCTCCCATTGTACAA 57.030 45.000 11.41 11.41 0.00 2.41
523 588 2.496899 AGCACCTCCCATTGTACAAG 57.503 50.000 14.65 6.30 0.00 3.16
524 589 1.004745 AGCACCTCCCATTGTACAAGG 59.995 52.381 14.65 13.92 0.00 3.61
525 590 1.463674 CACCTCCCATTGTACAAGGC 58.536 55.000 14.66 0.00 0.00 4.35
526 591 0.331616 ACCTCCCATTGTACAAGGCC 59.668 55.000 14.66 0.00 0.00 5.19
527 592 0.625849 CCTCCCATTGTACAAGGCCT 59.374 55.000 14.66 0.00 0.00 5.19
528 593 1.843851 CCTCCCATTGTACAAGGCCTA 59.156 52.381 14.66 1.57 0.00 3.93
529 594 2.241176 CCTCCCATTGTACAAGGCCTAA 59.759 50.000 14.66 0.00 0.00 2.69
530 595 3.545703 CTCCCATTGTACAAGGCCTAAG 58.454 50.000 14.66 4.24 0.00 2.18
531 596 2.024414 CCCATTGTACAAGGCCTAAGC 58.976 52.381 14.66 0.00 38.76 3.09
639 722 5.734855 AATGTTCACGCACATATAGAACC 57.265 39.130 0.00 0.00 36.30 3.62
647 730 8.528917 TCACGCACATATAGAACCATTTATAC 57.471 34.615 0.00 0.00 0.00 1.47
731 2236 1.821753 TGTGTGATTTAAATGGGCCGG 59.178 47.619 5.17 0.00 0.00 6.13
775 2281 0.392193 AGCCTGCCACAAGAAGATCG 60.392 55.000 0.00 0.00 0.00 3.69
782 2288 0.094216 CACAAGAAGATCGCGCTGTG 59.906 55.000 5.56 6.81 0.00 3.66
784 2290 1.448540 AAGAAGATCGCGCTGTGGG 60.449 57.895 5.56 0.00 0.00 4.61
785 2291 2.125512 GAAGATCGCGCTGTGGGT 60.126 61.111 5.56 0.00 0.00 4.51
786 2292 2.434884 AAGATCGCGCTGTGGGTG 60.435 61.111 5.56 0.00 0.00 4.61
787 2293 3.240134 AAGATCGCGCTGTGGGTGT 62.240 57.895 5.56 0.00 0.00 4.16
788 2294 3.188786 GATCGCGCTGTGGGTGTC 61.189 66.667 5.56 2.18 0.00 3.67
789 2295 4.760047 ATCGCGCTGTGGGTGTCC 62.760 66.667 5.56 0.00 0.00 4.02
947 2473 1.497309 TTCGCCATTGTTCCTCCCCT 61.497 55.000 0.00 0.00 0.00 4.79
948 2474 1.452108 CGCCATTGTTCCTCCCCTC 60.452 63.158 0.00 0.00 0.00 4.30
949 2475 1.915078 CGCCATTGTTCCTCCCCTCT 61.915 60.000 0.00 0.00 0.00 3.69
950 2476 0.106967 GCCATTGTTCCTCCCCTCTC 60.107 60.000 0.00 0.00 0.00 3.20
951 2477 0.179000 CCATTGTTCCTCCCCTCTCG 59.821 60.000 0.00 0.00 0.00 4.04
968 2506 3.537874 GCCCCGATCGTACCAGCT 61.538 66.667 15.09 0.00 0.00 4.24
969 2507 2.417516 CCCCGATCGTACCAGCTG 59.582 66.667 15.09 6.78 0.00 4.24
971 2509 1.226974 CCCGATCGTACCAGCTGTG 60.227 63.158 15.09 6.81 0.00 3.66
1437 3113 3.181467 ACTGGAGATAGAGAGCAACATGC 60.181 47.826 0.00 0.00 45.46 4.06
1473 3157 4.681744 ACATGTTTGCTTCGTGACATTTT 58.318 34.783 0.00 0.00 30.78 1.82
1474 3158 5.108517 ACATGTTTGCTTCGTGACATTTTT 58.891 33.333 0.00 0.00 30.78 1.94
1543 3233 1.656441 CAGCCAGCAACCTGTTGAC 59.344 57.895 13.94 5.46 42.93 3.18
1549 3239 0.109342 AGCAACCTGTTGACCTCTGG 59.891 55.000 13.94 0.00 42.93 3.86
1560 3250 3.753294 TGACCTCTGGTTCTCTGAAAC 57.247 47.619 0.00 0.00 35.25 2.78
1563 4305 4.061596 GACCTCTGGTTCTCTGAAACTTG 58.938 47.826 0.00 0.00 35.25 3.16
1564 4306 2.810852 CCTCTGGTTCTCTGAAACTTGC 59.189 50.000 0.00 0.00 0.00 4.01
1565 4307 3.495806 CCTCTGGTTCTCTGAAACTTGCT 60.496 47.826 0.00 0.00 0.00 3.91
1566 4308 4.133078 CTCTGGTTCTCTGAAACTTGCTT 58.867 43.478 0.00 0.00 0.00 3.91
1567 4309 4.130118 TCTGGTTCTCTGAAACTTGCTTC 58.870 43.478 0.00 0.00 0.00 3.86
1568 4310 4.133078 CTGGTTCTCTGAAACTTGCTTCT 58.867 43.478 0.00 0.00 0.00 2.85
1569 4311 4.526970 TGGTTCTCTGAAACTTGCTTCTT 58.473 39.130 0.00 0.00 0.00 2.52
1570 4312 5.680619 TGGTTCTCTGAAACTTGCTTCTTA 58.319 37.500 0.00 0.00 0.00 2.10
1575 4317 9.980780 GTTCTCTGAAACTTGCTTCTTATAATC 57.019 33.333 0.00 0.00 0.00 1.75
1576 4318 9.950496 TTCTCTGAAACTTGCTTCTTATAATCT 57.050 29.630 0.00 0.00 0.00 2.40
1577 4319 9.376075 TCTCTGAAACTTGCTTCTTATAATCTG 57.624 33.333 0.00 0.00 0.00 2.90
1579 4321 8.321353 TCTGAAACTTGCTTCTTATAATCTGGA 58.679 33.333 0.00 0.00 0.00 3.86
1583 4325 6.951971 ACTTGCTTCTTATAATCTGGAGTGT 58.048 36.000 0.00 0.00 0.00 3.55
1586 4328 8.893219 TTGCTTCTTATAATCTGGAGTGTATG 57.107 34.615 0.00 0.00 0.00 2.39
1636 4567 8.922058 ATGCTTGATTGAGTTTCATCAAATAC 57.078 30.769 0.00 0.00 42.21 1.89
1650 4587 8.998558 TTCATCAAATACTAGTACACGATACG 57.001 34.615 4.31 0.00 0.00 3.06
1653 4590 9.442033 CATCAAATACTAGTACACGATACGAAA 57.558 33.333 4.31 0.00 0.00 3.46
1733 4671 8.705594 CAGGGGTATTAGAAATTCTACTCTTCA 58.294 37.037 1.61 0.00 0.00 3.02
1747 4685 8.511604 TTCTACTCTTCATGAAAATTCATCCC 57.488 34.615 9.88 0.00 45.62 3.85
1748 4686 7.865820 TCTACTCTTCATGAAAATTCATCCCT 58.134 34.615 9.88 0.00 45.62 4.20
1749 4687 7.989741 TCTACTCTTCATGAAAATTCATCCCTC 59.010 37.037 9.88 0.00 45.62 4.30
1750 4688 5.587844 ACTCTTCATGAAAATTCATCCCTCG 59.412 40.000 9.88 0.00 45.62 4.63
1751 4689 4.883585 TCTTCATGAAAATTCATCCCTCGG 59.116 41.667 9.88 0.00 45.62 4.63
1752 4690 4.235079 TCATGAAAATTCATCCCTCGGT 57.765 40.909 5.68 0.00 45.62 4.69
1753 4691 4.599041 TCATGAAAATTCATCCCTCGGTT 58.401 39.130 5.68 0.00 45.62 4.44
1754 4692 5.016173 TCATGAAAATTCATCCCTCGGTTT 58.984 37.500 5.68 0.00 45.62 3.27
1755 4693 5.480073 TCATGAAAATTCATCCCTCGGTTTT 59.520 36.000 5.68 0.00 45.62 2.43
1756 4694 6.661377 TCATGAAAATTCATCCCTCGGTTTTA 59.339 34.615 5.68 0.00 45.62 1.52
1757 4695 7.341769 TCATGAAAATTCATCCCTCGGTTTTAT 59.658 33.333 5.68 0.00 45.62 1.40
1758 4696 7.475137 TGAAAATTCATCCCTCGGTTTTATT 57.525 32.000 0.00 0.00 31.01 1.40
1759 4697 8.582657 TGAAAATTCATCCCTCGGTTTTATTA 57.417 30.769 0.00 0.00 31.01 0.98
1760 4698 9.026121 TGAAAATTCATCCCTCGGTTTTATTAA 57.974 29.630 0.00 0.00 31.01 1.40
1764 4702 9.816354 AATTCATCCCTCGGTTTTATTAATTTG 57.184 29.630 0.00 0.00 0.00 2.32
1765 4703 6.801575 TCATCCCTCGGTTTTATTAATTTGC 58.198 36.000 0.00 0.00 0.00 3.68
1766 4704 6.378564 TCATCCCTCGGTTTTATTAATTTGCA 59.621 34.615 0.00 0.00 0.00 4.08
1767 4705 6.591750 TCCCTCGGTTTTATTAATTTGCAA 57.408 33.333 0.00 0.00 0.00 4.08
1768 4706 6.626302 TCCCTCGGTTTTATTAATTTGCAAG 58.374 36.000 0.00 0.00 0.00 4.01
1769 4707 6.209788 TCCCTCGGTTTTATTAATTTGCAAGT 59.790 34.615 0.00 0.00 0.00 3.16
1770 4708 6.871492 CCCTCGGTTTTATTAATTTGCAAGTT 59.129 34.615 12.16 12.16 0.00 2.66
1771 4709 7.062956 CCCTCGGTTTTATTAATTTGCAAGTTC 59.937 37.037 10.79 0.00 0.00 3.01
1772 4710 7.596995 CCTCGGTTTTATTAATTTGCAAGTTCA 59.403 33.333 10.79 0.30 0.00 3.18
1773 4711 9.139174 CTCGGTTTTATTAATTTGCAAGTTCAT 57.861 29.630 10.79 8.40 0.00 2.57
1774 4712 9.482627 TCGGTTTTATTAATTTGCAAGTTCATT 57.517 25.926 10.79 4.94 0.00 2.57
1775 4713 9.527566 CGGTTTTATTAATTTGCAAGTTCATTG 57.472 29.630 10.79 0.00 42.20 2.82
1780 4718 6.768029 TTAATTTGCAAGTTCATTGTCAGC 57.232 33.333 10.79 0.00 41.29 4.26
1781 4719 4.595762 ATTTGCAAGTTCATTGTCAGCT 57.404 36.364 0.00 0.00 41.29 4.24
1782 4720 5.710513 ATTTGCAAGTTCATTGTCAGCTA 57.289 34.783 0.00 0.00 41.29 3.32
1783 4721 4.754372 TTGCAAGTTCATTGTCAGCTAG 57.246 40.909 0.00 0.00 41.29 3.42
1786 4724 5.304778 TGCAAGTTCATTGTCAGCTAGTTA 58.695 37.500 0.00 0.00 41.29 2.24
1794 4732 5.185828 TCATTGTCAGCTAGTTAGAGCAAGA 59.814 40.000 0.00 0.00 45.43 3.02
1801 4739 4.161189 AGCTAGTTAGAGCAAGAGCATTGA 59.839 41.667 5.91 0.00 45.43 2.57
1804 4742 5.356291 AGTTAGAGCAAGAGCATTGAGAT 57.644 39.130 5.91 0.00 45.49 2.75
1807 4745 7.507829 AGTTAGAGCAAGAGCATTGAGATATT 58.492 34.615 5.91 0.00 45.49 1.28
1808 4746 7.441760 AGTTAGAGCAAGAGCATTGAGATATTG 59.558 37.037 5.91 0.00 45.49 1.90
1827 4765 1.629353 TGTATTGAACTGCCCCGGTAA 59.371 47.619 0.00 0.00 0.00 2.85
1853 4796 3.500680 TGCGTCTGTTATTTTCCAACTCC 59.499 43.478 0.00 0.00 0.00 3.85
1890 4858 5.470368 TGATTTCGGTACTATGCTCATAGC 58.530 41.667 14.86 0.00 43.46 2.97
1897 4865 4.321601 GGTACTATGCTCATAGCCTCACAG 60.322 50.000 14.86 0.00 43.46 3.66
1898 4866 2.036992 ACTATGCTCATAGCCTCACAGC 59.963 50.000 14.86 0.00 43.46 4.40
1899 4867 0.835276 ATGCTCATAGCCTCACAGCA 59.165 50.000 0.00 0.00 43.96 4.41
1900 4868 0.835276 TGCTCATAGCCTCACAGCAT 59.165 50.000 0.00 0.00 41.51 3.79
1901 4869 1.211212 TGCTCATAGCCTCACAGCATT 59.789 47.619 0.00 0.00 41.51 3.56
1902 4870 1.872313 GCTCATAGCCTCACAGCATTC 59.128 52.381 0.00 0.00 34.48 2.67
1903 4871 2.485124 GCTCATAGCCTCACAGCATTCT 60.485 50.000 0.00 0.00 34.48 2.40
1904 4872 3.391965 CTCATAGCCTCACAGCATTCTC 58.608 50.000 0.00 0.00 34.23 2.87
1907 4875 2.328819 AGCCTCACAGCATTCTCATC 57.671 50.000 0.00 0.00 34.23 2.92
1938 4907 4.032703 ACTTGTTGCAAAGCTGTGTTAG 57.967 40.909 5.61 0.00 0.00 2.34
1939 4908 3.443681 ACTTGTTGCAAAGCTGTGTTAGT 59.556 39.130 5.61 0.00 0.00 2.24
1953 4967 5.296780 GCTGTGTTAGTTGGTATGTGCATAT 59.703 40.000 0.31 0.31 0.00 1.78
1961 4975 6.537355 AGTTGGTATGTGCATATTGCTAGAT 58.463 36.000 0.00 0.00 45.31 1.98
1983 5001 3.819902 TGAATGTTGTTATGCTGCACTCA 59.180 39.130 3.57 1.55 0.00 3.41
1998 5017 6.808212 TGCTGCACTCAATAAAAAGCTTAATC 59.192 34.615 0.00 0.00 0.00 1.75
2001 5020 7.315142 TGCACTCAATAAAAAGCTTAATCCAG 58.685 34.615 0.00 0.00 0.00 3.86
2077 5097 1.552792 CCTGGAGTTCTTCAGTCCTCC 59.447 57.143 7.27 0.00 44.80 4.30
2381 5428 4.159321 TCAACCAATTGAGCAGAAACACAA 59.841 37.500 7.12 0.00 40.01 3.33
2390 5437 1.946768 GCAGAAACACAACAGCCAGTA 59.053 47.619 0.00 0.00 0.00 2.74
2411 5458 4.451629 AAAATTCTCCTGCAGCTTCATG 57.548 40.909 8.66 0.00 0.00 3.07
2420 5467 1.503542 CAGCTTCATGAACGGGCAC 59.496 57.895 17.45 0.00 0.00 5.01
2482 5529 0.247460 TGCAAGAGAGTCCGGTGATG 59.753 55.000 0.00 0.00 0.00 3.07
2484 5531 1.737363 GCAAGAGAGTCCGGTGATGTC 60.737 57.143 0.00 0.00 0.00 3.06
2485 5532 0.811915 AAGAGAGTCCGGTGATGTCG 59.188 55.000 0.00 0.00 0.00 4.35
2486 5533 0.035343 AGAGAGTCCGGTGATGTCGA 60.035 55.000 0.00 0.00 0.00 4.20
2488 5535 1.405821 GAGAGTCCGGTGATGTCGAAT 59.594 52.381 0.00 0.00 0.00 3.34
2489 5536 1.405821 AGAGTCCGGTGATGTCGAATC 59.594 52.381 0.00 0.00 0.00 2.52
2491 5538 2.617308 GAGTCCGGTGATGTCGAATCTA 59.383 50.000 0.00 0.00 0.00 1.98
2492 5539 2.358267 AGTCCGGTGATGTCGAATCTAC 59.642 50.000 0.00 0.00 0.00 2.59
2493 5540 1.679680 TCCGGTGATGTCGAATCTACC 59.320 52.381 0.00 3.54 0.00 3.18
2494 5541 1.407618 CCGGTGATGTCGAATCTACCA 59.592 52.381 17.85 3.20 0.00 3.25
2567 5617 5.814705 GCAGAGCTAAGATTATGTGAACTGT 59.185 40.000 0.00 0.00 0.00 3.55
2577 5627 6.765036 AGATTATGTGAACTGTCATGGCTAAG 59.235 38.462 0.00 0.00 35.80 2.18
2578 5628 2.426522 TGTGAACTGTCATGGCTAAGC 58.573 47.619 0.00 0.00 35.80 3.09
2651 5701 3.568007 GGTTTGTATCAAGTGCCAGTTGA 59.432 43.478 16.80 16.80 41.31 3.18
2663 5713 4.102649 GTGCCAGTTGAAACAGTTGTAAC 58.897 43.478 5.25 5.25 0.00 2.50
2665 5715 4.102649 GCCAGTTGAAACAGTTGTAACAC 58.897 43.478 12.83 2.34 0.00 3.32
2669 5719 7.531716 CCAGTTGAAACAGTTGTAACACTTAA 58.468 34.615 12.83 0.00 0.00 1.85
2671 5721 9.567848 CAGTTGAAACAGTTGTAACACTTAATT 57.432 29.630 12.83 0.00 0.00 1.40
2759 5809 7.997107 ATGTAATCAGTGCAAAATGCTAATG 57.003 32.000 3.78 0.82 45.31 1.90
2766 5816 5.796935 CAGTGCAAAATGCTAATGTCAGTAC 59.203 40.000 3.78 0.00 45.31 2.73
2795 5850 1.612950 CAGTAACCAGTGCATTTGCCA 59.387 47.619 0.00 0.00 41.18 4.92
2817 5872 5.890985 CCACCTTCCCAAAATATGTCATGTA 59.109 40.000 0.00 0.00 0.00 2.29
2881 5936 9.060347 AGCTACAATACCAAATCAGTATCAATG 57.940 33.333 0.00 0.00 30.10 2.82
2896 5951 9.292195 TCAGTATCAATGCATACATCATGAAAT 57.708 29.630 0.00 0.00 36.69 2.17
2972 6027 7.764695 AAACTTGGTCGACTTTTTAAAATGG 57.235 32.000 16.46 8.68 0.00 3.16
3113 6174 8.389366 AGTAGTACTCCCTCCGTAACATAATAT 58.611 37.037 0.00 0.00 0.00 1.28
3119 6180 7.727186 ACTCCCTCCGTAACATAATATAAGACA 59.273 37.037 0.00 0.00 0.00 3.41
3156 6217 2.445565 AAAACGTCTCCCTCCGTAAC 57.554 50.000 0.00 0.00 36.04 2.50
3157 6218 1.331214 AAACGTCTCCCTCCGTAACA 58.669 50.000 0.00 0.00 36.04 2.41
3158 6219 1.553706 AACGTCTCCCTCCGTAACAT 58.446 50.000 0.00 0.00 36.04 2.71
3159 6220 2.425143 ACGTCTCCCTCCGTAACATA 57.575 50.000 0.00 0.00 35.16 2.29
3160 6221 2.726821 ACGTCTCCCTCCGTAACATAA 58.273 47.619 0.00 0.00 35.16 1.90
3161 6222 3.294214 ACGTCTCCCTCCGTAACATAAT 58.706 45.455 0.00 0.00 35.16 1.28
3162 6223 4.464008 ACGTCTCCCTCCGTAACATAATA 58.536 43.478 0.00 0.00 35.16 0.98
3163 6224 5.075493 ACGTCTCCCTCCGTAACATAATAT 58.925 41.667 0.00 0.00 35.16 1.28
3164 6225 6.240894 ACGTCTCCCTCCGTAACATAATATA 58.759 40.000 0.00 0.00 35.16 0.86
3165 6226 6.716628 ACGTCTCCCTCCGTAACATAATATAA 59.283 38.462 0.00 0.00 35.16 0.98
3166 6227 7.094463 ACGTCTCCCTCCGTAACATAATATAAG 60.094 40.741 0.00 0.00 35.16 1.73
3167 6228 7.120285 CGTCTCCCTCCGTAACATAATATAAGA 59.880 40.741 0.00 0.00 0.00 2.10
3168 6229 8.242739 GTCTCCCTCCGTAACATAATATAAGAC 58.757 40.741 0.00 0.00 0.00 3.01
3169 6230 7.946219 TCTCCCTCCGTAACATAATATAAGACA 59.054 37.037 0.00 0.00 0.00 3.41
3170 6231 8.660295 TCCCTCCGTAACATAATATAAGACAT 57.340 34.615 0.00 0.00 0.00 3.06
3171 6232 9.096823 TCCCTCCGTAACATAATATAAGACATT 57.903 33.333 0.00 0.00 0.00 2.71
3172 6233 9.720769 CCCTCCGTAACATAATATAAGACATTT 57.279 33.333 0.00 0.00 0.00 2.32
3273 6334 8.810041 TCTTATTAAATTATACTCCCTCCGTCC 58.190 37.037 0.00 0.00 0.00 4.79
3274 6335 5.813513 TTAAATTATACTCCCTCCGTCCC 57.186 43.478 0.00 0.00 0.00 4.46
3275 6336 3.339713 AATTATACTCCCTCCGTCCCA 57.660 47.619 0.00 0.00 0.00 4.37
3276 6337 3.562108 ATTATACTCCCTCCGTCCCAT 57.438 47.619 0.00 0.00 0.00 4.00
3277 6338 4.687262 ATTATACTCCCTCCGTCCCATA 57.313 45.455 0.00 0.00 0.00 2.74
3278 6339 4.474303 TTATACTCCCTCCGTCCCATAA 57.526 45.455 0.00 0.00 0.00 1.90
3279 6340 3.562108 ATACTCCCTCCGTCCCATAAT 57.438 47.619 0.00 0.00 0.00 1.28
3280 6341 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
3281 6342 1.344087 ACTCCCTCCGTCCCATAATGT 60.344 52.381 0.00 0.00 0.00 2.71
3282 6343 2.090943 ACTCCCTCCGTCCCATAATGTA 60.091 50.000 0.00 0.00 0.00 2.29
3283 6344 2.563179 CTCCCTCCGTCCCATAATGTAG 59.437 54.545 0.00 0.00 0.00 2.74
3284 6345 2.090943 TCCCTCCGTCCCATAATGTAGT 60.091 50.000 0.00 0.00 0.00 2.73
3285 6346 2.037251 CCCTCCGTCCCATAATGTAGTG 59.963 54.545 0.00 0.00 0.00 2.74
3286 6347 2.548067 CCTCCGTCCCATAATGTAGTGC 60.548 54.545 0.00 0.00 0.00 4.40
3287 6348 2.102420 CTCCGTCCCATAATGTAGTGCA 59.898 50.000 0.00 0.00 0.00 4.57
3288 6349 2.703536 TCCGTCCCATAATGTAGTGCAT 59.296 45.455 0.00 0.00 40.03 3.96
3289 6350 3.898741 TCCGTCCCATAATGTAGTGCATA 59.101 43.478 0.00 0.00 36.67 3.14
3290 6351 4.530553 TCCGTCCCATAATGTAGTGCATAT 59.469 41.667 0.00 0.00 36.67 1.78
3291 6352 5.717654 TCCGTCCCATAATGTAGTGCATATA 59.282 40.000 0.00 0.00 36.67 0.86
3292 6353 6.042777 CCGTCCCATAATGTAGTGCATATAG 58.957 44.000 0.00 0.00 36.67 1.31
3293 6354 6.127451 CCGTCCCATAATGTAGTGCATATAGA 60.127 42.308 0.00 0.00 36.67 1.98
3294 6355 7.417911 CCGTCCCATAATGTAGTGCATATAGAT 60.418 40.741 0.00 0.00 36.67 1.98
3295 6356 7.981789 CGTCCCATAATGTAGTGCATATAGATT 59.018 37.037 0.00 8.63 36.67 2.40
3296 6357 9.672673 GTCCCATAATGTAGTGCATATAGATTT 57.327 33.333 8.82 0.00 36.67 2.17
3319 6380 6.445357 TTTTAAGAGTCAAACCTCACCAAC 57.555 37.500 0.00 0.00 33.75 3.77
3320 6381 3.933861 AAGAGTCAAACCTCACCAACT 57.066 42.857 0.00 0.00 33.75 3.16
3321 6382 3.933861 AGAGTCAAACCTCACCAACTT 57.066 42.857 0.00 0.00 33.75 2.66
3322 6383 4.236527 AGAGTCAAACCTCACCAACTTT 57.763 40.909 0.00 0.00 33.75 2.66
3323 6384 3.947834 AGAGTCAAACCTCACCAACTTTG 59.052 43.478 0.00 0.00 33.75 2.77
3324 6385 3.945285 GAGTCAAACCTCACCAACTTTGA 59.055 43.478 0.00 0.00 31.68 2.69
3325 6386 3.694566 AGTCAAACCTCACCAACTTTGAC 59.305 43.478 12.19 12.19 46.84 3.18
3326 6387 3.020984 TCAAACCTCACCAACTTTGACC 58.979 45.455 0.00 0.00 29.66 4.02
3327 6388 2.757868 CAAACCTCACCAACTTTGACCA 59.242 45.455 0.00 0.00 0.00 4.02
3328 6389 2.818751 ACCTCACCAACTTTGACCAA 57.181 45.000 0.00 0.00 0.00 3.67
3329 6390 2.654863 ACCTCACCAACTTTGACCAAG 58.345 47.619 0.00 0.00 38.64 3.61
3343 6404 8.669946 ACTTTGACCAAGTTTTTGAAGAAAAA 57.330 26.923 0.00 0.00 43.89 1.94
3362 6423 9.860898 AAGAAAAACATTTACATCTAGAATGCC 57.139 29.630 0.00 0.00 34.86 4.40
3363 6424 9.023962 AGAAAAACATTTACATCTAGAATGCCA 57.976 29.630 0.00 0.00 34.86 4.92
3364 6425 9.638239 GAAAAACATTTACATCTAGAATGCCAA 57.362 29.630 0.00 0.00 34.86 4.52
3365 6426 9.995003 AAAAACATTTACATCTAGAATGCCAAA 57.005 25.926 0.00 1.74 34.86 3.28
3366 6427 8.986477 AAACATTTACATCTAGAATGCCAAAC 57.014 30.769 0.00 0.00 34.86 2.93
3367 6428 7.701539 ACATTTACATCTAGAATGCCAAACA 57.298 32.000 0.00 0.00 34.86 2.83
3368 6429 8.297470 ACATTTACATCTAGAATGCCAAACAT 57.703 30.769 0.00 0.00 42.30 2.71
3369 6430 9.407380 ACATTTACATCTAGAATGCCAAACATA 57.593 29.630 0.00 0.00 38.34 2.29
3465 6526 9.691362 TTCTCTATAAATTTGGTCAAAGTTTGC 57.309 29.630 10.90 6.16 39.07 3.68
3466 6527 8.855110 TCTCTATAAATTTGGTCAAAGTTTGCA 58.145 29.630 10.90 1.36 39.07 4.08
3467 6528 9.474920 CTCTATAAATTTGGTCAAAGTTTGCAA 57.525 29.630 10.90 7.54 39.07 4.08
3468 6529 9.823647 TCTATAAATTTGGTCAAAGTTTGCAAA 57.176 25.926 17.93 17.93 39.07 3.68
3469 6530 9.862585 CTATAAATTTGGTCAAAGTTTGCAAAC 57.137 29.630 30.63 30.63 39.07 2.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 3.033764 TTCGTCAAGGTCGCGCAC 61.034 61.111 8.75 4.68 0.00 5.34
20 21 3.033764 GTTCGTCAAGGTCGCGCA 61.034 61.111 8.75 0.00 0.00 6.09
21 22 4.117372 CGTTCGTCAAGGTCGCGC 62.117 66.667 0.00 0.00 0.00 6.86
22 23 4.117372 GCGTTCGTCAAGGTCGCG 62.117 66.667 0.00 0.00 37.74 5.87
23 24 1.403972 CTAGCGTTCGTCAAGGTCGC 61.404 60.000 0.00 0.00 45.82 5.19
24 25 1.403972 GCTAGCGTTCGTCAAGGTCG 61.404 60.000 0.00 0.00 0.00 4.79
25 26 1.077089 GGCTAGCGTTCGTCAAGGTC 61.077 60.000 9.00 0.00 0.00 3.85
26 27 1.080025 GGCTAGCGTTCGTCAAGGT 60.080 57.895 9.00 0.00 0.00 3.50
27 28 2.158959 CGGCTAGCGTTCGTCAAGG 61.159 63.158 9.00 0.00 0.00 3.61
28 29 1.443872 ACGGCTAGCGTTCGTCAAG 60.444 57.895 9.00 0.00 30.89 3.02
29 30 1.731613 CACGGCTAGCGTTCGTCAA 60.732 57.895 13.56 0.00 34.73 3.18
30 31 2.126618 CACGGCTAGCGTTCGTCA 60.127 61.111 13.56 0.00 34.73 4.35
31 32 3.542742 GCACGGCTAGCGTTCGTC 61.543 66.667 13.56 6.61 34.73 4.20
33 34 4.796231 AGGCACGGCTAGCGTTCG 62.796 66.667 9.00 9.50 0.00 3.95
34 35 3.188786 CAGGCACGGCTAGCGTTC 61.189 66.667 9.00 4.81 0.00 3.95
61 62 4.093952 CAAGGCGCGCAGAAGGTG 62.094 66.667 34.42 16.10 0.00 4.00
140 141 2.433239 GCAATCATGGGGAAAAGAGCAT 59.567 45.455 0.00 0.00 0.00 3.79
141 142 1.826720 GCAATCATGGGGAAAAGAGCA 59.173 47.619 0.00 0.00 0.00 4.26
146 147 2.042842 TCAGAGGCAATCATGGGGAAAA 59.957 45.455 0.00 0.00 0.00 2.29
280 345 1.602668 CCAGAATTGCACACGGTTTGG 60.603 52.381 0.00 0.00 0.00 3.28
291 356 1.338200 ACCAGAGTCGTCCAGAATTGC 60.338 52.381 0.00 0.00 0.00 3.56
293 358 2.289694 CCAACCAGAGTCGTCCAGAATT 60.290 50.000 0.00 0.00 0.00 2.17
302 367 0.108615 CTGCCTACCAACCAGAGTCG 60.109 60.000 0.00 0.00 0.00 4.18
341 406 3.199946 TCTCCCATTGTACAAGGCCTTAG 59.800 47.826 20.00 15.05 0.00 2.18
351 416 4.345257 TCCTCTAAGCATCTCCCATTGTAC 59.655 45.833 0.00 0.00 0.00 2.90
353 418 3.387962 TCCTCTAAGCATCTCCCATTGT 58.612 45.455 0.00 0.00 0.00 2.71
355 420 3.390639 CACTCCTCTAAGCATCTCCCATT 59.609 47.826 0.00 0.00 0.00 3.16
356 421 2.971330 CACTCCTCTAAGCATCTCCCAT 59.029 50.000 0.00 0.00 0.00 4.00
357 422 2.392662 CACTCCTCTAAGCATCTCCCA 58.607 52.381 0.00 0.00 0.00 4.37
358 423 1.069978 GCACTCCTCTAAGCATCTCCC 59.930 57.143 0.00 0.00 0.00 4.30
359 424 2.038659 AGCACTCCTCTAAGCATCTCC 58.961 52.381 0.00 0.00 0.00 3.71
360 425 3.817709 AAGCACTCCTCTAAGCATCTC 57.182 47.619 0.00 0.00 0.00 2.75
361 426 4.541705 TCTAAGCACTCCTCTAAGCATCT 58.458 43.478 0.00 0.00 0.00 2.90
362 427 4.927978 TCTAAGCACTCCTCTAAGCATC 57.072 45.455 0.00 0.00 0.00 3.91
363 428 5.683876 TTTCTAAGCACTCCTCTAAGCAT 57.316 39.130 0.00 0.00 0.00 3.79
364 429 5.483685 TTTTCTAAGCACTCCTCTAAGCA 57.516 39.130 0.00 0.00 0.00 3.91
365 430 6.993786 ATTTTTCTAAGCACTCCTCTAAGC 57.006 37.500 0.00 0.00 0.00 3.09
367 432 9.227777 GGTTTATTTTTCTAAGCACTCCTCTAA 57.772 33.333 0.00 0.00 0.00 2.10
368 433 7.548075 CGGTTTATTTTTCTAAGCACTCCTCTA 59.452 37.037 0.00 0.00 0.00 2.43
369 434 6.371825 CGGTTTATTTTTCTAAGCACTCCTCT 59.628 38.462 0.00 0.00 0.00 3.69
370 435 6.370718 TCGGTTTATTTTTCTAAGCACTCCTC 59.629 38.462 0.00 0.00 0.00 3.71
371 436 6.235664 TCGGTTTATTTTTCTAAGCACTCCT 58.764 36.000 0.00 0.00 0.00 3.69
372 437 6.370718 TCTCGGTTTATTTTTCTAAGCACTCC 59.629 38.462 0.00 0.00 0.00 3.85
373 438 7.360575 TCTCGGTTTATTTTTCTAAGCACTC 57.639 36.000 0.00 0.00 0.00 3.51
374 439 7.923414 ATCTCGGTTTATTTTTCTAAGCACT 57.077 32.000 0.00 0.00 0.00 4.40
375 440 8.965986 AAATCTCGGTTTATTTTTCTAAGCAC 57.034 30.769 0.00 0.00 0.00 4.40
376 441 9.620660 GAAAATCTCGGTTTATTTTTCTAAGCA 57.379 29.630 0.00 0.00 35.87 3.91
377 442 9.841880 AGAAAATCTCGGTTTATTTTTCTAAGC 57.158 29.630 7.06 0.00 42.02 3.09
381 446 9.899226 CTTCAGAAAATCTCGGTTTATTTTTCT 57.101 29.630 0.00 0.00 43.65 2.52
382 447 8.639428 GCTTCAGAAAATCTCGGTTTATTTTTC 58.361 33.333 0.00 0.00 35.87 2.29
383 448 8.141268 TGCTTCAGAAAATCTCGGTTTATTTTT 58.859 29.630 0.00 0.00 35.87 1.94
384 449 7.595130 GTGCTTCAGAAAATCTCGGTTTATTTT 59.405 33.333 0.00 0.00 37.85 1.82
385 450 7.084486 GTGCTTCAGAAAATCTCGGTTTATTT 58.916 34.615 0.00 0.00 0.00 1.40
386 451 6.349363 GGTGCTTCAGAAAATCTCGGTTTATT 60.349 38.462 0.00 0.00 0.00 1.40
387 452 5.123979 GGTGCTTCAGAAAATCTCGGTTTAT 59.876 40.000 0.00 0.00 0.00 1.40
388 453 4.454504 GGTGCTTCAGAAAATCTCGGTTTA 59.545 41.667 0.00 0.00 0.00 2.01
389 454 3.253432 GGTGCTTCAGAAAATCTCGGTTT 59.747 43.478 0.00 0.00 0.00 3.27
390 455 2.814336 GGTGCTTCAGAAAATCTCGGTT 59.186 45.455 0.00 0.00 0.00 4.44
391 456 2.427506 GGTGCTTCAGAAAATCTCGGT 58.572 47.619 0.00 0.00 0.00 4.69
392 457 1.394917 CGGTGCTTCAGAAAATCTCGG 59.605 52.381 0.00 0.00 0.00 4.63
393 458 1.394917 CCGGTGCTTCAGAAAATCTCG 59.605 52.381 0.00 0.00 0.00 4.04
394 459 2.160417 CACCGGTGCTTCAGAAAATCTC 59.840 50.000 24.02 0.00 0.00 2.75
395 460 2.154462 CACCGGTGCTTCAGAAAATCT 58.846 47.619 24.02 0.00 0.00 2.40
396 461 2.619013 CACCGGTGCTTCAGAAAATC 57.381 50.000 24.02 0.00 0.00 2.17
408 473 2.550978 CTGTAGAAATAGGCACCGGTG 58.449 52.381 30.66 30.66 0.00 4.94
409 474 1.485066 CCTGTAGAAATAGGCACCGGT 59.515 52.381 0.00 0.00 0.00 5.28
410 475 1.760613 TCCTGTAGAAATAGGCACCGG 59.239 52.381 0.00 0.00 34.08 5.28
411 476 2.693591 TCTCCTGTAGAAATAGGCACCG 59.306 50.000 0.00 0.00 34.08 4.94
412 477 3.961408 TCTCTCCTGTAGAAATAGGCACC 59.039 47.826 0.00 0.00 34.08 5.01
413 478 4.498345 CGTCTCTCCTGTAGAAATAGGCAC 60.498 50.000 0.00 0.00 34.08 5.01
414 479 3.632604 CGTCTCTCCTGTAGAAATAGGCA 59.367 47.826 0.00 0.00 34.08 4.75
415 480 3.551250 GCGTCTCTCCTGTAGAAATAGGC 60.551 52.174 0.00 0.00 34.08 3.93
416 481 3.886505 AGCGTCTCTCCTGTAGAAATAGG 59.113 47.826 0.00 0.00 35.36 2.57
417 482 5.508200 AAGCGTCTCTCCTGTAGAAATAG 57.492 43.478 0.00 0.00 32.46 1.73
418 483 6.120905 ACTAAGCGTCTCTCCTGTAGAAATA 58.879 40.000 0.00 0.00 32.46 1.40
419 484 4.951094 ACTAAGCGTCTCTCCTGTAGAAAT 59.049 41.667 0.00 0.00 32.46 2.17
420 485 4.333690 ACTAAGCGTCTCTCCTGTAGAAA 58.666 43.478 0.00 0.00 32.46 2.52
421 486 3.952931 ACTAAGCGTCTCTCCTGTAGAA 58.047 45.455 0.00 0.00 32.46 2.10
422 487 3.630892 ACTAAGCGTCTCTCCTGTAGA 57.369 47.619 0.00 0.00 0.00 2.59
423 488 5.812652 CTTAACTAAGCGTCTCTCCTGTAG 58.187 45.833 0.00 0.00 0.00 2.74
424 489 5.814764 CTTAACTAAGCGTCTCTCCTGTA 57.185 43.478 0.00 0.00 0.00 2.74
425 490 4.705337 CTTAACTAAGCGTCTCTCCTGT 57.295 45.455 0.00 0.00 0.00 4.00
437 502 4.715527 ACAGGGTAGACGCTTAACTAAG 57.284 45.455 0.00 0.00 37.00 2.18
438 503 5.009631 TGTACAGGGTAGACGCTTAACTAA 58.990 41.667 0.00 0.00 37.00 2.24
439 504 4.588899 TGTACAGGGTAGACGCTTAACTA 58.411 43.478 0.00 0.00 37.00 2.24
440 505 3.424703 TGTACAGGGTAGACGCTTAACT 58.575 45.455 0.00 0.00 37.00 2.24
441 506 3.855689 TGTACAGGGTAGACGCTTAAC 57.144 47.619 0.00 0.00 37.00 2.01
442 507 4.870123 TTTGTACAGGGTAGACGCTTAA 57.130 40.909 0.00 0.00 37.00 1.85
443 508 6.528537 TTATTTGTACAGGGTAGACGCTTA 57.471 37.500 0.00 0.00 37.00 3.09
444 509 3.975168 ATTTGTACAGGGTAGACGCTT 57.025 42.857 0.00 0.00 37.00 4.68
445 510 4.679905 GCTTATTTGTACAGGGTAGACGCT 60.680 45.833 0.00 0.00 39.95 5.07
446 511 3.554731 GCTTATTTGTACAGGGTAGACGC 59.445 47.826 0.00 0.00 0.00 5.19
447 512 4.565564 GTGCTTATTTGTACAGGGTAGACG 59.434 45.833 0.00 0.00 0.00 4.18
448 513 4.874396 GGTGCTTATTTGTACAGGGTAGAC 59.126 45.833 0.00 0.00 0.00 2.59
449 514 4.382254 CGGTGCTTATTTGTACAGGGTAGA 60.382 45.833 0.00 0.00 0.00 2.59
450 515 3.869246 CGGTGCTTATTTGTACAGGGTAG 59.131 47.826 0.00 0.00 0.00 3.18
451 516 3.514706 TCGGTGCTTATTTGTACAGGGTA 59.485 43.478 0.00 0.00 0.00 3.69
452 517 2.303600 TCGGTGCTTATTTGTACAGGGT 59.696 45.455 0.00 0.00 0.00 4.34
453 518 2.980568 TCGGTGCTTATTTGTACAGGG 58.019 47.619 0.00 0.00 0.00 4.45
454 519 4.536364 CATCGGTGCTTATTTGTACAGG 57.464 45.455 0.00 0.00 0.00 4.00
468 533 3.372206 CAGACTTTCCTTAAGCATCGGTG 59.628 47.826 0.00 0.00 37.37 4.94
469 534 3.600388 CAGACTTTCCTTAAGCATCGGT 58.400 45.455 0.00 0.00 37.37 4.69
470 535 2.939103 CCAGACTTTCCTTAAGCATCGG 59.061 50.000 0.00 0.00 37.37 4.18
471 536 3.600388 ACCAGACTTTCCTTAAGCATCG 58.400 45.455 0.00 0.00 37.37 3.84
472 537 5.966742 AAACCAGACTTTCCTTAAGCATC 57.033 39.130 0.00 0.00 37.37 3.91
473 538 8.422577 AAATAAACCAGACTTTCCTTAAGCAT 57.577 30.769 0.00 0.00 37.37 3.79
474 539 7.724061 AGAAATAAACCAGACTTTCCTTAAGCA 59.276 33.333 0.00 0.00 37.37 3.91
475 540 8.112016 AGAAATAAACCAGACTTTCCTTAAGC 57.888 34.615 0.00 0.00 37.37 3.09
476 541 9.508642 AGAGAAATAAACCAGACTTTCCTTAAG 57.491 33.333 0.00 0.00 39.87 1.85
479 544 9.508642 CTTAGAGAAATAAACCAGACTTTCCTT 57.491 33.333 0.00 0.00 0.00 3.36
480 545 7.608376 GCTTAGAGAAATAAACCAGACTTTCCT 59.392 37.037 0.00 0.00 0.00 3.36
481 546 7.390718 TGCTTAGAGAAATAAACCAGACTTTCC 59.609 37.037 0.00 0.00 0.00 3.13
482 547 8.231161 GTGCTTAGAGAAATAAACCAGACTTTC 58.769 37.037 0.00 0.00 0.00 2.62
483 548 7.175119 GGTGCTTAGAGAAATAAACCAGACTTT 59.825 37.037 0.00 0.00 0.00 2.66
484 549 6.655425 GGTGCTTAGAGAAATAAACCAGACTT 59.345 38.462 0.00 0.00 0.00 3.01
485 550 6.013293 AGGTGCTTAGAGAAATAAACCAGACT 60.013 38.462 0.00 0.00 0.00 3.24
486 551 6.174049 AGGTGCTTAGAGAAATAAACCAGAC 58.826 40.000 0.00 0.00 0.00 3.51
487 552 6.374417 AGGTGCTTAGAGAAATAAACCAGA 57.626 37.500 0.00 0.00 0.00 3.86
488 553 5.586643 GGAGGTGCTTAGAGAAATAAACCAG 59.413 44.000 0.00 0.00 0.00 4.00
489 554 5.497474 GGAGGTGCTTAGAGAAATAAACCA 58.503 41.667 0.00 0.00 0.00 3.67
490 555 4.882427 GGGAGGTGCTTAGAGAAATAAACC 59.118 45.833 0.00 0.00 0.00 3.27
491 556 5.497474 TGGGAGGTGCTTAGAGAAATAAAC 58.503 41.667 0.00 0.00 0.00 2.01
492 557 5.772393 TGGGAGGTGCTTAGAGAAATAAA 57.228 39.130 0.00 0.00 0.00 1.40
493 558 5.975988 ATGGGAGGTGCTTAGAGAAATAA 57.024 39.130 0.00 0.00 0.00 1.40
494 559 5.191722 ACAATGGGAGGTGCTTAGAGAAATA 59.808 40.000 0.00 0.00 0.00 1.40
495 560 4.018050 ACAATGGGAGGTGCTTAGAGAAAT 60.018 41.667 0.00 0.00 0.00 2.17
496 561 3.330701 ACAATGGGAGGTGCTTAGAGAAA 59.669 43.478 0.00 0.00 0.00 2.52
497 562 2.912956 ACAATGGGAGGTGCTTAGAGAA 59.087 45.455 0.00 0.00 0.00 2.87
498 563 2.551270 ACAATGGGAGGTGCTTAGAGA 58.449 47.619 0.00 0.00 0.00 3.10
499 564 3.197766 TGTACAATGGGAGGTGCTTAGAG 59.802 47.826 0.00 0.00 0.00 2.43
500 565 3.178046 TGTACAATGGGAGGTGCTTAGA 58.822 45.455 0.00 0.00 0.00 2.10
501 566 3.627395 TGTACAATGGGAGGTGCTTAG 57.373 47.619 0.00 0.00 0.00 2.18
502 567 3.308117 CCTTGTACAATGGGAGGTGCTTA 60.308 47.826 9.13 0.00 0.00 3.09
503 568 2.555227 CCTTGTACAATGGGAGGTGCTT 60.555 50.000 9.13 0.00 0.00 3.91
504 569 1.004745 CCTTGTACAATGGGAGGTGCT 59.995 52.381 9.13 0.00 0.00 4.40
505 570 1.463674 CCTTGTACAATGGGAGGTGC 58.536 55.000 9.13 0.00 0.00 5.01
506 571 1.463674 GCCTTGTACAATGGGAGGTG 58.536 55.000 16.08 0.00 0.00 4.00
507 572 0.331616 GGCCTTGTACAATGGGAGGT 59.668 55.000 16.08 0.00 0.00 3.85
508 573 0.625849 AGGCCTTGTACAATGGGAGG 59.374 55.000 16.08 11.34 0.00 4.30
509 574 3.545703 CTTAGGCCTTGTACAATGGGAG 58.454 50.000 12.58 1.65 0.00 4.30
510 575 2.356741 GCTTAGGCCTTGTACAATGGGA 60.357 50.000 12.58 0.00 0.00 4.37
511 576 2.024414 GCTTAGGCCTTGTACAATGGG 58.976 52.381 12.58 14.91 0.00 4.00
618 701 4.765273 TGGTTCTATATGTGCGTGAACAT 58.235 39.130 0.00 0.00 43.21 2.71
685 771 6.314784 ACTTAATGCAAATACTTGAACGCTC 58.685 36.000 0.00 0.00 34.14 5.03
763 2269 0.094216 CACAGCGCGATCTTCTTGTG 59.906 55.000 12.10 2.36 0.00 3.33
947 2473 2.903855 GGTACGATCGGGGCGAGA 60.904 66.667 20.98 0.00 39.91 4.04
948 2474 3.195591 CTGGTACGATCGGGGCGAG 62.196 68.421 20.98 11.13 39.91 5.03
949 2475 3.214123 CTGGTACGATCGGGGCGA 61.214 66.667 20.98 5.31 41.13 5.54
950 2476 4.944372 GCTGGTACGATCGGGGCG 62.944 72.222 20.98 4.77 0.00 6.13
951 2477 3.537874 AGCTGGTACGATCGGGGC 61.538 66.667 20.98 14.63 0.00 5.80
968 2506 0.250252 TTCTTGGATGCTCGCACACA 60.250 50.000 0.00 0.00 0.00 3.72
969 2507 0.445436 CTTCTTGGATGCTCGCACAC 59.555 55.000 0.00 0.00 0.00 3.82
971 2509 1.442769 TTCTTCTTGGATGCTCGCAC 58.557 50.000 0.00 0.00 0.00 5.34
1437 3113 5.359009 AGCAAACATGTAATCTTCCATCCAG 59.641 40.000 0.00 0.00 0.00 3.86
1473 3157 4.037446 AGCCGCAAACTTGACAGATTAAAA 59.963 37.500 0.00 0.00 0.00 1.52
1474 3158 3.568007 AGCCGCAAACTTGACAGATTAAA 59.432 39.130 0.00 0.00 0.00 1.52
1476 3160 2.483877 CAGCCGCAAACTTGACAGATTA 59.516 45.455 0.00 0.00 0.00 1.75
1477 3161 1.267806 CAGCCGCAAACTTGACAGATT 59.732 47.619 0.00 0.00 0.00 2.40
1478 3162 0.877071 CAGCCGCAAACTTGACAGAT 59.123 50.000 0.00 0.00 0.00 2.90
1481 3165 1.723608 CCACAGCCGCAAACTTGACA 61.724 55.000 0.00 0.00 0.00 3.58
1482 3166 1.008538 CCACAGCCGCAAACTTGAC 60.009 57.895 0.00 0.00 0.00 3.18
1484 3168 0.318107 CTTCCACAGCCGCAAACTTG 60.318 55.000 0.00 0.00 0.00 3.16
1485 3169 0.751643 ACTTCCACAGCCGCAAACTT 60.752 50.000 0.00 0.00 0.00 2.66
1543 3233 2.810852 GCAAGTTTCAGAGAACCAGAGG 59.189 50.000 0.00 0.00 0.00 3.69
1549 3239 9.980780 GATTATAAGAAGCAAGTTTCAGAGAAC 57.019 33.333 0.00 0.00 0.00 3.01
1560 3250 8.986847 CATACACTCCAGATTATAAGAAGCAAG 58.013 37.037 0.00 0.00 0.00 4.01
1563 4305 6.370166 GCCATACACTCCAGATTATAAGAAGC 59.630 42.308 0.00 0.00 0.00 3.86
1564 4306 7.445121 TGCCATACACTCCAGATTATAAGAAG 58.555 38.462 0.00 0.00 0.00 2.85
1565 4307 7.071196 ACTGCCATACACTCCAGATTATAAGAA 59.929 37.037 0.00 0.00 0.00 2.52
1566 4308 6.554982 ACTGCCATACACTCCAGATTATAAGA 59.445 38.462 0.00 0.00 0.00 2.10
1567 4309 6.763355 ACTGCCATACACTCCAGATTATAAG 58.237 40.000 0.00 0.00 0.00 1.73
1568 4310 6.326323 TGACTGCCATACACTCCAGATTATAA 59.674 38.462 0.00 0.00 0.00 0.98
1569 4311 5.838521 TGACTGCCATACACTCCAGATTATA 59.161 40.000 0.00 0.00 0.00 0.98
1570 4312 4.655649 TGACTGCCATACACTCCAGATTAT 59.344 41.667 0.00 0.00 0.00 1.28
1575 4317 2.768253 TTGACTGCCATACACTCCAG 57.232 50.000 0.00 0.00 0.00 3.86
1576 4318 2.305635 ACATTGACTGCCATACACTCCA 59.694 45.455 0.00 0.00 0.00 3.86
1577 4319 2.991250 ACATTGACTGCCATACACTCC 58.009 47.619 0.00 0.00 0.00 3.85
1579 4321 3.754965 ACAACATTGACTGCCATACACT 58.245 40.909 0.00 0.00 0.00 3.55
1583 4325 3.758023 CCTGAACAACATTGACTGCCATA 59.242 43.478 0.00 0.00 0.00 2.74
1586 4328 1.270550 CCCTGAACAACATTGACTGCC 59.729 52.381 0.00 0.00 0.00 4.85
1636 4567 4.333649 TGGACCTTTCGTATCGTGTACTAG 59.666 45.833 0.00 0.00 0.00 2.57
1649 4586 6.513180 TGCTACTATATCTTTGGACCTTTCG 58.487 40.000 0.00 0.00 0.00 3.46
1650 4587 7.988028 AGTTGCTACTATATCTTTGGACCTTTC 59.012 37.037 0.00 0.00 31.21 2.62
1653 4590 7.439108 AAGTTGCTACTATATCTTTGGACCT 57.561 36.000 0.00 0.00 33.17 3.85
1692 4629 7.574021 AATACCCCTGATCTGAATATGCTTA 57.426 36.000 0.38 0.00 0.00 3.09
1739 4677 7.926018 GCAAATTAATAAAACCGAGGGATGAAT 59.074 33.333 0.00 0.00 0.00 2.57
1740 4678 7.093727 TGCAAATTAATAAAACCGAGGGATGAA 60.094 33.333 0.00 0.00 0.00 2.57
1741 4679 6.378564 TGCAAATTAATAAAACCGAGGGATGA 59.621 34.615 0.00 0.00 0.00 2.92
1742 4680 6.568869 TGCAAATTAATAAAACCGAGGGATG 58.431 36.000 0.00 0.00 0.00 3.51
1743 4681 6.783708 TGCAAATTAATAAAACCGAGGGAT 57.216 33.333 0.00 0.00 0.00 3.85
1744 4682 6.209788 ACTTGCAAATTAATAAAACCGAGGGA 59.790 34.615 0.00 0.00 0.00 4.20
1745 4683 6.394809 ACTTGCAAATTAATAAAACCGAGGG 58.605 36.000 0.00 0.00 0.00 4.30
1746 4684 7.596995 TGAACTTGCAAATTAATAAAACCGAGG 59.403 33.333 0.00 0.00 0.00 4.63
1747 4685 8.514136 TGAACTTGCAAATTAATAAAACCGAG 57.486 30.769 0.00 0.00 0.00 4.63
1748 4686 9.482627 AATGAACTTGCAAATTAATAAAACCGA 57.517 25.926 0.00 0.00 0.00 4.69
1749 4687 9.527566 CAATGAACTTGCAAATTAATAAAACCG 57.472 29.630 0.00 0.00 0.00 4.44
1754 4692 8.924691 GCTGACAATGAACTTGCAAATTAATAA 58.075 29.630 0.00 0.00 38.50 1.40
1755 4693 8.306038 AGCTGACAATGAACTTGCAAATTAATA 58.694 29.630 0.00 0.00 38.50 0.98
1756 4694 7.156673 AGCTGACAATGAACTTGCAAATTAAT 58.843 30.769 0.00 0.00 38.50 1.40
1757 4695 6.514947 AGCTGACAATGAACTTGCAAATTAA 58.485 32.000 0.00 0.00 38.50 1.40
1758 4696 6.088016 AGCTGACAATGAACTTGCAAATTA 57.912 33.333 0.00 0.00 38.50 1.40
1759 4697 4.952460 AGCTGACAATGAACTTGCAAATT 58.048 34.783 0.00 0.00 38.50 1.82
1760 4698 4.595762 AGCTGACAATGAACTTGCAAAT 57.404 36.364 0.00 0.00 38.50 2.32
1761 4699 4.580167 ACTAGCTGACAATGAACTTGCAAA 59.420 37.500 0.00 0.00 38.50 3.68
1762 4700 4.136796 ACTAGCTGACAATGAACTTGCAA 58.863 39.130 0.00 0.00 38.50 4.08
1763 4701 3.743521 ACTAGCTGACAATGAACTTGCA 58.256 40.909 0.00 0.00 38.50 4.08
1764 4702 4.756084 AACTAGCTGACAATGAACTTGC 57.244 40.909 0.00 0.00 38.50 4.01
1765 4703 6.183360 GCTCTAACTAGCTGACAATGAACTTG 60.183 42.308 0.00 0.00 39.50 3.16
1766 4704 5.872070 GCTCTAACTAGCTGACAATGAACTT 59.128 40.000 0.00 0.00 39.50 2.66
1767 4705 5.047021 TGCTCTAACTAGCTGACAATGAACT 60.047 40.000 0.00 0.00 43.19 3.01
1768 4706 5.171476 TGCTCTAACTAGCTGACAATGAAC 58.829 41.667 0.00 0.00 43.19 3.18
1769 4707 5.405935 TGCTCTAACTAGCTGACAATGAA 57.594 39.130 0.00 0.00 43.19 2.57
1770 4708 5.185828 TCTTGCTCTAACTAGCTGACAATGA 59.814 40.000 0.00 0.00 43.19 2.57
1771 4709 5.414360 TCTTGCTCTAACTAGCTGACAATG 58.586 41.667 0.00 0.00 43.19 2.82
1772 4710 5.659463 CTCTTGCTCTAACTAGCTGACAAT 58.341 41.667 0.00 0.00 43.19 2.71
1773 4711 4.619394 GCTCTTGCTCTAACTAGCTGACAA 60.619 45.833 0.00 0.00 43.19 3.18
1774 4712 3.119316 GCTCTTGCTCTAACTAGCTGACA 60.119 47.826 0.00 0.00 43.19 3.58
1775 4713 3.119316 TGCTCTTGCTCTAACTAGCTGAC 60.119 47.826 0.00 0.00 43.19 3.51
1776 4714 3.092301 TGCTCTTGCTCTAACTAGCTGA 58.908 45.455 0.00 0.00 43.19 4.26
1777 4715 3.516981 TGCTCTTGCTCTAACTAGCTG 57.483 47.619 0.00 0.00 43.19 4.24
1778 4716 4.161189 TCAATGCTCTTGCTCTAACTAGCT 59.839 41.667 0.00 0.00 43.19 3.32
1779 4717 4.437239 TCAATGCTCTTGCTCTAACTAGC 58.563 43.478 0.00 0.00 43.08 3.42
1780 4718 5.900425 TCTCAATGCTCTTGCTCTAACTAG 58.100 41.667 0.00 0.00 40.48 2.57
1781 4719 5.921962 TCTCAATGCTCTTGCTCTAACTA 57.078 39.130 0.00 0.00 40.48 2.24
1782 4720 4.815533 TCTCAATGCTCTTGCTCTAACT 57.184 40.909 0.00 0.00 40.48 2.24
1783 4721 7.226325 ACAATATCTCAATGCTCTTGCTCTAAC 59.774 37.037 0.00 0.00 40.48 2.34
1786 4724 5.682659 ACAATATCTCAATGCTCTTGCTCT 58.317 37.500 0.00 0.00 40.48 4.09
1794 4732 7.255381 GGCAGTTCAATACAATATCTCAATGCT 60.255 37.037 0.00 0.00 0.00 3.79
1801 4739 4.389374 CGGGGCAGTTCAATACAATATCT 58.611 43.478 0.00 0.00 0.00 1.98
1804 4742 2.240160 ACCGGGGCAGTTCAATACAATA 59.760 45.455 6.32 0.00 0.00 1.90
1807 4745 1.277579 TACCGGGGCAGTTCAATACA 58.722 50.000 6.32 0.00 0.00 2.29
1808 4746 2.406596 TTACCGGGGCAGTTCAATAC 57.593 50.000 6.32 0.00 0.00 1.89
1827 4765 7.391148 AGTTGGAAAATAACAGACGCATTAT 57.609 32.000 0.00 0.00 0.00 1.28
1853 4796 3.067461 CCGAAATCAGGAGGAGTAGAGTG 59.933 52.174 0.00 0.00 0.00 3.51
1890 4858 4.121317 GAGAAGATGAGAATGCTGTGAGG 58.879 47.826 0.00 0.00 0.00 3.86
1897 4865 6.985645 ACAAGTAGATGAGAAGATGAGAATGC 59.014 38.462 0.00 0.00 0.00 3.56
1898 4866 8.819015 CAACAAGTAGATGAGAAGATGAGAATG 58.181 37.037 0.00 0.00 0.00 2.67
1899 4867 7.495279 GCAACAAGTAGATGAGAAGATGAGAAT 59.505 37.037 0.00 0.00 0.00 2.40
1900 4868 6.815641 GCAACAAGTAGATGAGAAGATGAGAA 59.184 38.462 0.00 0.00 0.00 2.87
1901 4869 6.071165 TGCAACAAGTAGATGAGAAGATGAGA 60.071 38.462 0.00 0.00 0.00 3.27
1902 4870 6.104665 TGCAACAAGTAGATGAGAAGATGAG 58.895 40.000 0.00 0.00 0.00 2.90
1903 4871 6.041423 TGCAACAAGTAGATGAGAAGATGA 57.959 37.500 0.00 0.00 0.00 2.92
1904 4872 6.732531 TTGCAACAAGTAGATGAGAAGATG 57.267 37.500 0.00 0.00 0.00 2.90
1907 4875 5.180868 AGCTTTGCAACAAGTAGATGAGAAG 59.819 40.000 0.00 0.00 0.00 2.85
1953 4967 6.678655 GCAGCATAACAACATTCATCTAGCAA 60.679 38.462 0.00 0.00 0.00 3.91
1961 4975 3.819902 TGAGTGCAGCATAACAACATTCA 59.180 39.130 0.00 0.00 0.00 2.57
2077 5097 1.156736 CCAACCCAGACTTACGCTTG 58.843 55.000 0.00 0.00 0.00 4.01
2381 5428 3.084786 GCAGGAGAATTTTACTGGCTGT 58.915 45.455 10.10 1.74 0.00 4.40
2390 5437 4.084287 TCATGAAGCTGCAGGAGAATTTT 58.916 39.130 17.12 0.00 0.00 1.82
2411 5458 4.084888 CGCTTTCCGTGCCCGTTC 62.085 66.667 0.00 0.00 0.00 3.95
2420 5467 1.153823 ATCTCGTGTCCGCTTTCCG 60.154 57.895 0.00 0.00 0.00 4.30
2430 5477 2.028130 GACCATCTCCTCATCTCGTGT 58.972 52.381 0.00 0.00 0.00 4.49
2482 5529 2.423892 TCAGTCTGCTGGTAGATTCGAC 59.576 50.000 0.00 0.00 42.78 4.20
2484 5531 2.685388 TCTCAGTCTGCTGGTAGATTCG 59.315 50.000 0.00 0.00 42.78 3.34
2485 5532 3.699038 AGTCTCAGTCTGCTGGTAGATTC 59.301 47.826 0.00 0.00 42.78 2.52
2486 5533 3.707316 AGTCTCAGTCTGCTGGTAGATT 58.293 45.455 0.00 0.00 42.78 2.40
2488 5535 2.889170 AGTCTCAGTCTGCTGGTAGA 57.111 50.000 0.00 0.00 42.78 2.59
2489 5536 3.951775 AAAGTCTCAGTCTGCTGGTAG 57.048 47.619 0.00 0.00 42.78 3.18
2491 5538 2.171448 ACAAAAGTCTCAGTCTGCTGGT 59.829 45.455 0.00 0.00 42.78 4.00
2492 5539 2.547211 CACAAAAGTCTCAGTCTGCTGG 59.453 50.000 0.00 0.00 42.78 4.85
2493 5540 3.201290 ACACAAAAGTCTCAGTCTGCTG 58.799 45.455 0.00 0.00 43.87 4.41
2494 5541 3.118629 TGACACAAAAGTCTCAGTCTGCT 60.119 43.478 0.00 0.00 39.27 4.24
2567 5617 2.288666 CTTTAAGCCGCTTAGCCATGA 58.711 47.619 12.50 0.00 0.00 3.07
2577 5627 3.454375 TCTACACATAGCTTTAAGCCGC 58.546 45.455 13.84 0.00 43.77 6.53
2578 5628 5.050490 ACATCTACACATAGCTTTAAGCCG 58.950 41.667 13.84 5.26 43.77 5.52
2663 5713 8.073768 ACCGATGTACACAAGAAAAATTAAGTG 58.926 33.333 0.00 0.00 0.00 3.16
2665 5715 8.073768 ACACCGATGTACACAAGAAAAATTAAG 58.926 33.333 0.00 0.00 37.26 1.85
2669 5719 5.298276 ACACACCGATGTACACAAGAAAAAT 59.702 36.000 0.00 0.00 36.72 1.82
2671 5721 4.193090 ACACACCGATGTACACAAGAAAA 58.807 39.130 0.00 0.00 36.72 2.29
2680 5730 5.726688 GCATCATACAAACACACCGATGTAC 60.727 44.000 0.00 0.00 36.72 2.90
2686 5736 1.809547 TGGCATCATACAAACACACCG 59.190 47.619 0.00 0.00 0.00 4.94
2766 5816 3.814842 TGCACTGGTTACTGATTTGACAG 59.185 43.478 0.00 0.00 42.78 3.51
2795 5850 6.129179 CCTACATGACATATTTTGGGAAGGT 58.871 40.000 0.00 0.00 0.00 3.50
2817 5872 5.827797 TCTATGAACTTGCTCAACAAAACCT 59.172 36.000 0.00 0.00 37.96 3.50
3004 6059 8.122472 TCTGTTTTGATTAAAATCTCCTTCCC 57.878 34.615 0.00 0.00 38.01 3.97
3078 6139 6.264970 ACGGAGGGAGTACTACTGAATATTTC 59.735 42.308 4.77 0.00 0.00 2.17
3136 6197 2.102925 TGTTACGGAGGGAGACGTTTTT 59.897 45.455 0.00 0.00 43.79 1.94
3137 6198 1.688197 TGTTACGGAGGGAGACGTTTT 59.312 47.619 0.00 0.00 43.79 2.43
3138 6199 1.331214 TGTTACGGAGGGAGACGTTT 58.669 50.000 0.00 0.00 43.79 3.60
3139 6200 1.553706 ATGTTACGGAGGGAGACGTT 58.446 50.000 0.00 0.00 43.79 3.99
3140 6201 2.425143 TATGTTACGGAGGGAGACGT 57.575 50.000 0.00 0.00 46.17 4.34
3141 6202 5.640189 ATATTATGTTACGGAGGGAGACG 57.360 43.478 0.00 0.00 0.00 4.18
3142 6203 8.242739 GTCTTATATTATGTTACGGAGGGAGAC 58.757 40.741 0.00 0.00 0.00 3.36
3143 6204 7.946219 TGTCTTATATTATGTTACGGAGGGAGA 59.054 37.037 0.00 0.00 0.00 3.71
3144 6205 8.118976 TGTCTTATATTATGTTACGGAGGGAG 57.881 38.462 0.00 0.00 0.00 4.30
3145 6206 8.660295 ATGTCTTATATTATGTTACGGAGGGA 57.340 34.615 0.00 0.00 0.00 4.20
3146 6207 9.720769 AAATGTCTTATATTATGTTACGGAGGG 57.279 33.333 0.00 0.00 0.00 4.30
3262 6323 1.424638 ACATTATGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
3263 6324 2.090943 ACTACATTATGGGACGGAGGGA 60.091 50.000 0.00 0.00 0.00 4.20
3264 6325 2.037251 CACTACATTATGGGACGGAGGG 59.963 54.545 0.00 0.00 0.00 4.30
3265 6326 2.548067 GCACTACATTATGGGACGGAGG 60.548 54.545 0.00 0.00 0.00 4.30
3266 6327 2.102420 TGCACTACATTATGGGACGGAG 59.898 50.000 0.00 0.00 0.00 4.63
3267 6328 2.112190 TGCACTACATTATGGGACGGA 58.888 47.619 0.00 0.00 0.00 4.69
3268 6329 2.613026 TGCACTACATTATGGGACGG 57.387 50.000 0.00 0.00 0.00 4.79
3269 6330 6.863275 TCTATATGCACTACATTATGGGACG 58.137 40.000 0.00 0.00 40.38 4.79
3270 6331 9.672673 AAATCTATATGCACTACATTATGGGAC 57.327 33.333 0.00 0.00 40.38 4.46
3295 6356 6.661805 AGTTGGTGAGGTTTGACTCTTAAAAA 59.338 34.615 0.00 0.00 38.32 1.94
3296 6357 6.184789 AGTTGGTGAGGTTTGACTCTTAAAA 58.815 36.000 0.00 0.00 38.32 1.52
3297 6358 5.751586 AGTTGGTGAGGTTTGACTCTTAAA 58.248 37.500 0.00 0.00 38.32 1.52
3298 6359 5.367945 AGTTGGTGAGGTTTGACTCTTAA 57.632 39.130 0.00 0.00 38.32 1.85
3299 6360 5.367945 AAGTTGGTGAGGTTTGACTCTTA 57.632 39.130 0.00 0.00 38.32 2.10
3300 6361 3.933861 AGTTGGTGAGGTTTGACTCTT 57.066 42.857 0.00 0.00 38.32 2.85
3301 6362 3.933861 AAGTTGGTGAGGTTTGACTCT 57.066 42.857 0.00 0.00 38.32 3.24
3302 6363 3.945285 TCAAAGTTGGTGAGGTTTGACTC 59.055 43.478 0.00 0.00 34.72 3.36
3303 6364 3.963129 TCAAAGTTGGTGAGGTTTGACT 58.037 40.909 0.00 0.00 34.72 3.41
3304 6365 4.028852 GTCAAAGTTGGTGAGGTTTGAC 57.971 45.455 10.15 10.15 46.75 3.18
3305 6366 3.020984 GGTCAAAGTTGGTGAGGTTTGA 58.979 45.455 0.00 0.00 36.74 2.69
3306 6367 2.757868 TGGTCAAAGTTGGTGAGGTTTG 59.242 45.455 0.00 0.00 0.00 2.93
3307 6368 3.094484 TGGTCAAAGTTGGTGAGGTTT 57.906 42.857 0.00 0.00 0.00 3.27
3308 6369 2.818751 TGGTCAAAGTTGGTGAGGTT 57.181 45.000 0.00 0.00 0.00 3.50
3309 6370 2.654863 CTTGGTCAAAGTTGGTGAGGT 58.345 47.619 0.00 0.00 0.00 3.85
3336 6397 9.860898 GGCATTCTAGATGTAAATGTTTTTCTT 57.139 29.630 0.00 0.00 33.82 2.52
3337 6398 9.023962 TGGCATTCTAGATGTAAATGTTTTTCT 57.976 29.630 0.00 0.00 33.82 2.52
3338 6399 9.638239 TTGGCATTCTAGATGTAAATGTTTTTC 57.362 29.630 0.00 0.00 33.82 2.29
3339 6400 9.995003 TTTGGCATTCTAGATGTAAATGTTTTT 57.005 25.926 0.00 0.00 33.82 1.94
3340 6401 9.423061 GTTTGGCATTCTAGATGTAAATGTTTT 57.577 29.630 0.00 0.00 33.82 2.43
3341 6402 8.584157 TGTTTGGCATTCTAGATGTAAATGTTT 58.416 29.630 0.00 0.00 33.82 2.83
3342 6403 8.121305 TGTTTGGCATTCTAGATGTAAATGTT 57.879 30.769 0.00 0.00 33.82 2.71
3343 6404 7.701539 TGTTTGGCATTCTAGATGTAAATGT 57.298 32.000 0.00 0.00 33.82 2.71
3439 6500 9.691362 GCAAACTTTGACCAAATTTATAGAGAA 57.309 29.630 5.65 0.00 0.00 2.87
3440 6501 8.855110 TGCAAACTTTGACCAAATTTATAGAGA 58.145 29.630 5.65 0.00 0.00 3.10
3441 6502 9.474920 TTGCAAACTTTGACCAAATTTATAGAG 57.525 29.630 5.65 0.00 0.00 2.43
3442 6503 9.823647 TTTGCAAACTTTGACCAAATTTATAGA 57.176 25.926 8.05 0.00 0.00 1.98
3443 6504 9.862585 GTTTGCAAACTTTGACCAAATTTATAG 57.137 29.630 30.49 0.00 36.03 1.31
3444 6505 9.606631 AGTTTGCAAACTTTGACCAAATTTATA 57.393 25.926 33.85 0.00 46.52 0.98
3445 6506 8.504812 AGTTTGCAAACTTTGACCAAATTTAT 57.495 26.923 33.85 10.80 46.52 1.40
3446 6507 7.913674 AGTTTGCAAACTTTGACCAAATTTA 57.086 28.000 33.85 0.00 46.52 1.40
3447 6508 6.816134 AGTTTGCAAACTTTGACCAAATTT 57.184 29.167 33.85 11.83 46.52 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.