Multiple sequence alignment - TraesCS3D01G417700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G417700 chr3D 100.000 2606 0 0 1 2606 529504757 529502152 0.000000e+00 4813.0
1 TraesCS3D01G417700 chr3D 89.399 1198 91 7 910 2074 529496600 529495406 0.000000e+00 1476.0
2 TraesCS3D01G417700 chr3D 88.136 59 5 1 167 225 596077099 596077155 4.650000e-08 69.4
3 TraesCS3D01G417700 chr3A 93.317 1197 47 12 910 2074 663452045 663450850 0.000000e+00 1736.0
4 TraesCS3D01G417700 chr3A 90.393 1197 81 8 912 2074 663441904 663440708 0.000000e+00 1543.0
5 TraesCS3D01G417700 chr3A 94.769 497 25 1 2109 2605 663450852 663450357 0.000000e+00 773.0
6 TraesCS3D01G417700 chr3A 84.530 181 28 0 2426 2606 603920740 603920920 2.060000e-41 180.0
7 TraesCS3D01G417700 chr3A 79.204 226 47 0 311 536 62265170 62265395 9.650000e-35 158.0
8 TraesCS3D01G417700 chr3A 90.566 53 5 0 703 755 614233423 614233475 1.290000e-08 71.3
9 TraesCS3D01G417700 chr3B 90.590 1169 84 5 910 2055 700234738 700235903 0.000000e+00 1526.0
10 TraesCS3D01G417700 chr3B 88.824 1190 96 15 910 2062 700073432 700072243 0.000000e+00 1426.0
11 TraesCS3D01G417700 chr5D 92.053 755 54 3 1 750 525467606 525466853 0.000000e+00 1057.0
12 TraesCS3D01G417700 chr5D 81.911 1078 150 23 1006 2064 560224896 560225947 0.000000e+00 869.0
13 TraesCS3D01G417700 chr5D 88.636 88 9 1 438 525 96249913 96249827 3.550000e-19 106.0
14 TraesCS3D01G417700 chr5D 81.250 80 15 0 671 750 46089517 46089596 6.020000e-07 65.8
15 TraesCS3D01G417700 chr5D 97.143 35 1 0 758 792 542374409 542374375 2.800000e-05 60.2
16 TraesCS3D01G417700 chr7D 82.977 1122 161 18 972 2065 624769085 624770204 0.000000e+00 987.0
17 TraesCS3D01G417700 chr7D 80.203 1086 159 39 1025 2057 48824882 48823800 0.000000e+00 763.0
18 TraesCS3D01G417700 chr7D 84.746 177 27 0 2424 2600 583053070 583052894 7.410000e-41 178.0
19 TraesCS3D01G417700 chr7D 77.500 160 32 4 382 540 575357366 575357210 2.760000e-15 93.5
20 TraesCS3D01G417700 chr7D 95.745 47 1 1 175 221 55191564 55191609 1.000000e-09 75.0
21 TraesCS3D01G417700 chr7D 85.294 68 10 0 688 755 167363766 167363699 1.290000e-08 71.3
22 TraesCS3D01G417700 chr2A 89.133 773 68 7 1 771 760726873 760727631 0.000000e+00 948.0
23 TraesCS3D01G417700 chr2A 86.275 102 11 3 438 539 717883837 717883739 9.860000e-20 108.0
24 TraesCS3D01G417700 chr5B 81.818 1144 156 27 975 2070 710608481 710609620 0.000000e+00 913.0
25 TraesCS3D01G417700 chr5B 81.105 561 86 9 1024 1583 711858974 711858433 5.150000e-117 431.0
26 TraesCS3D01G417700 chr5B 82.857 175 25 5 2426 2598 565934510 565934339 4.490000e-33 152.0
27 TraesCS3D01G417700 chr4A 82.005 1117 161 17 979 2056 604105229 604104114 0.000000e+00 913.0
28 TraesCS3D01G417700 chr4A 94.286 35 1 1 723 756 56265081 56265047 5.000000e-03 52.8
29 TraesCS3D01G417700 chr7A 80.481 1081 156 39 1025 2057 51662495 51661422 0.000000e+00 776.0
30 TraesCS3D01G417700 chr7A 84.831 178 25 2 2424 2600 84252780 84252956 7.410000e-41 178.0
31 TraesCS3D01G417700 chr1B 81.630 675 105 14 1 664 327337688 327337022 2.280000e-150 542.0
32 TraesCS3D01G417700 chrUn 77.205 737 109 37 1287 1972 28781719 28782447 2.450000e-100 375.0
33 TraesCS3D01G417700 chr4D 86.364 176 23 1 2418 2592 378304206 378304381 9.520000e-45 191.0
34 TraesCS3D01G417700 chr1D 85.000 180 27 0 2426 2605 470652873 470652694 1.590000e-42 183.0
35 TraesCS3D01G417700 chr1D 82.514 183 27 5 2426 2605 366008041 366007861 3.470000e-34 156.0
36 TraesCS3D01G417700 chr2D 82.320 181 29 3 2426 2605 403472168 403471990 1.250000e-33 154.0
37 TraesCS3D01G417700 chr2D 83.019 106 15 3 436 540 503572542 503572645 2.760000e-15 93.5
38 TraesCS3D01G417700 chr5A 83.898 118 15 4 418 534 574665182 574665296 2.740000e-20 110.0
39 TraesCS3D01G417700 chr5A 90.196 51 5 0 703 753 600355052 600355002 1.670000e-07 67.6
40 TraesCS3D01G417700 chr6D 90.385 52 4 1 704 755 365733380 365733330 1.670000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G417700 chr3D 529502152 529504757 2605 True 4813.0 4813 100.000 1 2606 1 chr3D.!!$R2 2605
1 TraesCS3D01G417700 chr3D 529495406 529496600 1194 True 1476.0 1476 89.399 910 2074 1 chr3D.!!$R1 1164
2 TraesCS3D01G417700 chr3A 663440708 663441904 1196 True 1543.0 1543 90.393 912 2074 1 chr3A.!!$R1 1162
3 TraesCS3D01G417700 chr3A 663450357 663452045 1688 True 1254.5 1736 94.043 910 2605 2 chr3A.!!$R2 1695
4 TraesCS3D01G417700 chr3B 700234738 700235903 1165 False 1526.0 1526 90.590 910 2055 1 chr3B.!!$F1 1145
5 TraesCS3D01G417700 chr3B 700072243 700073432 1189 True 1426.0 1426 88.824 910 2062 1 chr3B.!!$R1 1152
6 TraesCS3D01G417700 chr5D 525466853 525467606 753 True 1057.0 1057 92.053 1 750 1 chr5D.!!$R2 749
7 TraesCS3D01G417700 chr5D 560224896 560225947 1051 False 869.0 869 81.911 1006 2064 1 chr5D.!!$F2 1058
8 TraesCS3D01G417700 chr7D 624769085 624770204 1119 False 987.0 987 82.977 972 2065 1 chr7D.!!$F2 1093
9 TraesCS3D01G417700 chr7D 48823800 48824882 1082 True 763.0 763 80.203 1025 2057 1 chr7D.!!$R1 1032
10 TraesCS3D01G417700 chr2A 760726873 760727631 758 False 948.0 948 89.133 1 771 1 chr2A.!!$F1 770
11 TraesCS3D01G417700 chr5B 710608481 710609620 1139 False 913.0 913 81.818 975 2070 1 chr5B.!!$F1 1095
12 TraesCS3D01G417700 chr5B 711858433 711858974 541 True 431.0 431 81.105 1024 1583 1 chr5B.!!$R2 559
13 TraesCS3D01G417700 chr4A 604104114 604105229 1115 True 913.0 913 82.005 979 2056 1 chr4A.!!$R2 1077
14 TraesCS3D01G417700 chr7A 51661422 51662495 1073 True 776.0 776 80.481 1025 2057 1 chr7A.!!$R1 1032
15 TraesCS3D01G417700 chr1B 327337022 327337688 666 True 542.0 542 81.630 1 664 1 chr1B.!!$R1 663
16 TraesCS3D01G417700 chrUn 28781719 28782447 728 False 375.0 375 77.205 1287 1972 1 chrUn.!!$F1 685

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
751 762 0.029433 GGCTTATTTGTAGCAGCCGC 59.971 55.0 0.0 0.0 42.47 6.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2092 2278 0.541863 ATACTCCGTTGAGGCCCTTG 59.458 55.0 0.0 0.0 43.29 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.260088 CTCGTCTCTCCCCCTCTCGT 62.260 65.000 0.00 0.00 0.00 4.18
32 33 2.123640 CCCCTCTCGTCTCTCCCC 60.124 72.222 0.00 0.00 0.00 4.81
40 41 2.818132 GTCTCTCCCCGATGCAGG 59.182 66.667 0.00 0.00 0.00 4.85
63 64 2.964310 GCTGGGAGGAAGCAGAGCA 61.964 63.158 0.00 0.00 40.52 4.26
94 95 0.677731 CCGCCAGAGATTTGCTTCCA 60.678 55.000 0.00 0.00 0.00 3.53
121 132 1.014564 CCTCCTTCCTGTCGCGTTTC 61.015 60.000 5.77 0.00 0.00 2.78
216 227 2.962253 GCTACGATGGAGCACCGC 60.962 66.667 0.00 0.00 39.84 5.68
236 247 2.750888 GCGCCGGAGACCACAAATC 61.751 63.158 10.31 0.00 0.00 2.17
237 248 1.375396 CGCCGGAGACCACAAATCA 60.375 57.895 5.05 0.00 0.00 2.57
245 256 3.935828 GGAGACCACAAATCAAGAGTAGC 59.064 47.826 0.00 0.00 0.00 3.58
250 261 4.999950 ACCACAAATCAAGAGTAGCTTCTG 59.000 41.667 0.00 0.00 33.60 3.02
261 272 2.435059 GCTTCTGCTCCGACCACC 60.435 66.667 0.00 0.00 36.03 4.61
286 297 4.056805 ATGGGCGTCTCCATGAGT 57.943 55.556 0.00 0.00 45.13 3.41
287 298 2.300996 ATGGGCGTCTCCATGAGTT 58.699 52.632 0.00 0.00 45.13 3.01
288 299 0.107508 ATGGGCGTCTCCATGAGTTG 60.108 55.000 0.00 0.00 45.13 3.16
289 300 2.109126 GGGCGTCTCCATGAGTTGC 61.109 63.158 0.00 0.00 36.21 4.17
290 301 1.375908 GGCGTCTCCATGAGTTGCA 60.376 57.895 0.00 0.00 34.50 4.08
291 302 0.955428 GGCGTCTCCATGAGTTGCAA 60.955 55.000 0.00 0.00 34.50 4.08
292 303 1.089920 GCGTCTCCATGAGTTGCAAT 58.910 50.000 0.59 0.00 33.62 3.56
293 304 1.202110 GCGTCTCCATGAGTTGCAATG 60.202 52.381 0.59 0.00 33.62 2.82
294 305 1.399440 CGTCTCCATGAGTTGCAATGG 59.601 52.381 10.06 10.06 35.58 3.16
295 306 2.715046 GTCTCCATGAGTTGCAATGGA 58.285 47.619 16.63 16.63 40.56 3.41
297 308 1.466856 TCCATGAGTTGCAATGGAGC 58.533 50.000 14.20 0.00 38.19 4.70
298 309 1.179152 CCATGAGTTGCAATGGAGCA 58.821 50.000 10.73 2.13 43.99 4.26
299 310 1.135199 CCATGAGTTGCAATGGAGCAC 60.135 52.381 10.73 0.00 45.61 4.40
300 311 1.135199 CATGAGTTGCAATGGAGCACC 60.135 52.381 0.59 0.00 45.61 5.01
301 312 1.236616 TGAGTTGCAATGGAGCACCG 61.237 55.000 0.59 0.00 45.61 4.94
302 313 2.126346 GTTGCAATGGAGCACCGC 60.126 61.111 0.59 0.00 45.61 5.68
303 314 3.736100 TTGCAATGGAGCACCGCG 61.736 61.111 0.00 0.00 45.61 6.46
305 316 4.465512 GCAATGGAGCACCGCGTG 62.466 66.667 4.92 4.73 39.42 5.34
318 329 3.726517 GCGTGCTGTTGCGATGGT 61.727 61.111 0.00 0.00 43.34 3.55
319 330 2.174107 CGTGCTGTTGCGATGGTG 59.826 61.111 0.00 0.00 43.34 4.17
320 331 2.316867 CGTGCTGTTGCGATGGTGA 61.317 57.895 0.00 0.00 43.34 4.02
321 332 1.207593 GTGCTGTTGCGATGGTGAC 59.792 57.895 0.00 0.00 43.34 3.67
322 333 1.965930 TGCTGTTGCGATGGTGACC 60.966 57.895 0.00 0.00 43.34 4.02
323 334 3.027170 GCTGTTGCGATGGTGACCG 62.027 63.158 0.00 0.00 0.00 4.79
362 373 3.869272 GCTGCAACTCCGGCGATG 61.869 66.667 9.30 0.00 0.00 3.84
363 374 2.434884 CTGCAACTCCGGCGATGT 60.435 61.111 9.30 3.26 0.00 3.06
364 375 2.031919 TGCAACTCCGGCGATGTT 59.968 55.556 9.30 10.18 0.00 2.71
365 376 2.244436 CTGCAACTCCGGCGATGTTG 62.244 60.000 27.59 27.59 42.55 3.33
366 377 2.480555 CAACTCCGGCGATGTTGC 59.519 61.111 23.54 0.00 35.39 4.17
374 385 2.401195 GCGATGTTGCCTCGAAGC 59.599 61.111 0.00 0.00 38.38 3.86
375 386 2.103042 GCGATGTTGCCTCGAAGCT 61.103 57.895 7.65 0.00 38.38 3.74
376 387 1.712081 CGATGTTGCCTCGAAGCTG 59.288 57.895 7.65 0.00 38.38 4.24
377 388 1.016130 CGATGTTGCCTCGAAGCTGT 61.016 55.000 7.65 0.00 38.38 4.40
378 389 0.723981 GATGTTGCCTCGAAGCTGTC 59.276 55.000 7.65 0.00 0.00 3.51
379 390 0.035317 ATGTTGCCTCGAAGCTGTCA 59.965 50.000 7.65 4.45 0.00 3.58
380 391 0.601046 TGTTGCCTCGAAGCTGTCAG 60.601 55.000 7.65 0.00 0.00 3.51
381 392 1.004560 TTGCCTCGAAGCTGTCAGG 60.005 57.895 7.65 0.00 0.00 3.86
382 393 2.125350 GCCTCGAAGCTGTCAGGG 60.125 66.667 1.14 0.00 0.00 4.45
383 394 2.650116 GCCTCGAAGCTGTCAGGGA 61.650 63.158 1.14 0.00 0.00 4.20
384 395 1.515020 CCTCGAAGCTGTCAGGGAG 59.485 63.158 1.14 0.00 0.00 4.30
385 396 1.153667 CTCGAAGCTGTCAGGGAGC 60.154 63.158 1.14 0.00 36.65 4.70
386 397 1.881903 CTCGAAGCTGTCAGGGAGCA 61.882 60.000 1.14 0.00 39.05 4.26
387 398 1.739562 CGAAGCTGTCAGGGAGCAC 60.740 63.158 1.14 0.00 39.05 4.40
388 399 1.376553 GAAGCTGTCAGGGAGCACC 60.377 63.158 1.14 0.00 39.05 5.01
389 400 3.245668 AAGCTGTCAGGGAGCACCG 62.246 63.158 1.14 0.00 46.96 4.94
391 402 3.699894 CTGTCAGGGAGCACCGCT 61.700 66.667 0.00 0.00 46.96 5.52
409 420 3.266964 GCTGTTGCAATGGAGCGA 58.733 55.556 0.59 0.00 39.41 4.93
410 421 1.154150 GCTGTTGCAATGGAGCGAC 60.154 57.895 0.59 0.00 46.78 5.19
412 423 2.202349 GTTGCAATGGAGCGACGC 60.202 61.111 13.03 13.03 38.98 5.19
413 424 3.430862 TTGCAATGGAGCGACGCC 61.431 61.111 17.79 8.03 37.31 5.68
437 448 2.969238 CTGGAAGCATAGCGGGCG 60.969 66.667 0.00 0.00 36.08 6.13
451 462 3.446570 GGCGCTGCAATGGAGCTT 61.447 61.111 23.54 0.00 34.03 3.74
452 463 2.101770 GCGCTGCAATGGAGCTTC 59.898 61.111 23.54 11.93 34.03 3.86
453 464 2.402388 CGCTGCAATGGAGCTTCG 59.598 61.111 23.54 5.49 34.03 3.79
454 465 2.101770 GCTGCAATGGAGCTTCGC 59.898 61.111 19.55 0.00 33.37 4.70
455 466 2.796651 CTGCAATGGAGCTTCGCC 59.203 61.111 0.00 0.00 34.99 5.54
456 467 3.104602 CTGCAATGGAGCTTCGCCG 62.105 63.158 0.00 0.00 34.99 6.46
457 468 2.819595 GCAATGGAGCTTCGCCGA 60.820 61.111 0.00 0.00 0.00 5.54
458 469 2.398554 GCAATGGAGCTTCGCCGAA 61.399 57.895 0.00 0.00 0.00 4.30
459 470 1.717937 CAATGGAGCTTCGCCGAAG 59.282 57.895 22.02 22.02 42.03 3.79
460 471 1.021390 CAATGGAGCTTCGCCGAAGT 61.021 55.000 25.97 14.02 41.27 3.01
461 472 0.321653 AATGGAGCTTCGCCGAAGTT 60.322 50.000 25.97 21.49 41.27 2.66
462 473 1.021390 ATGGAGCTTCGCCGAAGTTG 61.021 55.000 25.97 4.48 41.27 3.16
463 474 1.668151 GGAGCTTCGCCGAAGTTGT 60.668 57.895 25.97 12.61 41.27 3.32
464 475 0.389426 GGAGCTTCGCCGAAGTTGTA 60.389 55.000 25.97 0.00 41.27 2.41
465 476 1.425412 GAGCTTCGCCGAAGTTGTAA 58.575 50.000 25.97 0.00 41.27 2.41
466 477 2.000447 GAGCTTCGCCGAAGTTGTAAT 59.000 47.619 25.97 7.47 41.27 1.89
467 478 1.732259 AGCTTCGCCGAAGTTGTAATG 59.268 47.619 25.97 1.51 41.27 1.90
468 479 1.202031 GCTTCGCCGAAGTTGTAATGG 60.202 52.381 25.97 0.79 41.27 3.16
469 480 2.343101 CTTCGCCGAAGTTGTAATGGA 58.657 47.619 18.42 0.00 35.21 3.41
470 481 2.004583 TCGCCGAAGTTGTAATGGAG 57.995 50.000 0.00 0.00 0.00 3.86
471 482 0.373716 CGCCGAAGTTGTAATGGAGC 59.626 55.000 0.00 0.00 0.00 4.70
472 483 1.739067 GCCGAAGTTGTAATGGAGCT 58.261 50.000 0.00 0.00 0.00 4.09
473 484 2.084546 GCCGAAGTTGTAATGGAGCTT 58.915 47.619 0.00 0.00 0.00 3.74
474 485 2.096013 GCCGAAGTTGTAATGGAGCTTC 59.904 50.000 0.00 0.00 34.06 3.86
477 488 4.585619 GAAGTTGTAATGGAGCTTCGTC 57.414 45.455 0.00 0.00 0.00 4.20
478 489 2.607187 AGTTGTAATGGAGCTTCGTCG 58.393 47.619 0.00 0.00 0.00 5.12
479 490 1.659098 GTTGTAATGGAGCTTCGTCGG 59.341 52.381 0.00 0.00 0.00 4.79
480 491 0.459585 TGTAATGGAGCTTCGTCGGC 60.460 55.000 0.00 0.00 0.00 5.54
481 492 1.226859 TAATGGAGCTTCGTCGGCG 60.227 57.895 1.15 1.15 39.92 6.46
488 499 4.847516 CTTCGTCGGCGCCATCGA 62.848 66.667 29.86 29.86 38.10 3.59
489 500 4.201679 TTCGTCGGCGCCATCGAT 62.202 61.111 32.39 0.00 38.93 3.59
490 501 4.923710 TCGTCGGCGCCATCGATG 62.924 66.667 29.86 23.78 42.86 3.84
497 508 3.566853 CGCCATCGATGCTGCGTT 61.567 61.111 29.31 0.00 41.95 4.84
498 509 2.023741 GCCATCGATGCTGCGTTG 59.976 61.111 20.25 5.58 0.00 4.10
499 510 2.711311 CCATCGATGCTGCGTTGG 59.289 61.111 20.25 12.23 42.54 3.77
500 511 3.798380 CATCGATGCTGCGTTGGA 58.202 55.556 13.37 4.37 0.00 3.53
501 512 1.640069 CATCGATGCTGCGTTGGAG 59.360 57.895 13.37 0.00 0.00 3.86
502 513 2.176273 ATCGATGCTGCGTTGGAGC 61.176 57.895 9.16 3.15 36.95 4.70
503 514 2.584261 ATCGATGCTGCGTTGGAGCT 62.584 55.000 11.54 0.00 37.35 4.09
504 515 2.806856 CGATGCTGCGTTGGAGCTC 61.807 63.158 4.71 4.71 37.35 4.09
505 516 2.437359 ATGCTGCGTTGGAGCTCC 60.437 61.111 26.78 26.78 37.35 4.70
533 544 2.745884 CAATGGTGCTTCGCCGGA 60.746 61.111 5.05 0.00 36.72 5.14
534 545 2.746277 AATGGTGCTTCGCCGGAC 60.746 61.111 5.05 0.00 36.72 4.79
538 549 4.072088 GTGCTTCGCCGGACGTTG 62.072 66.667 5.05 7.22 44.19 4.10
548 559 2.175811 GGACGTTGCCGATGTTGC 59.824 61.111 0.00 0.00 37.88 4.17
549 560 2.202171 GACGTTGCCGATGTTGCG 60.202 61.111 0.00 0.00 37.88 4.85
550 561 2.950172 GACGTTGCCGATGTTGCGT 61.950 57.895 0.00 0.00 37.88 5.24
551 562 2.251075 CGTTGCCGATGTTGCGTT 59.749 55.556 0.00 0.00 35.63 4.84
552 563 2.074353 CGTTGCCGATGTTGCGTTG 61.074 57.895 0.00 0.00 35.63 4.10
553 564 1.281353 GTTGCCGATGTTGCGTTGA 59.719 52.632 0.00 0.00 0.00 3.18
554 565 0.317436 GTTGCCGATGTTGCGTTGAA 60.317 50.000 0.00 0.00 0.00 2.69
555 566 0.040514 TTGCCGATGTTGCGTTGAAG 60.041 50.000 0.00 0.00 0.00 3.02
556 567 1.797537 GCCGATGTTGCGTTGAAGC 60.798 57.895 0.00 0.00 37.71 3.86
557 568 1.573932 CCGATGTTGCGTTGAAGCA 59.426 52.632 0.00 0.00 46.54 3.91
564 575 3.453222 TGCGTTGAAGCAATTGTCG 57.547 47.368 7.40 4.52 45.06 4.35
565 576 0.660005 TGCGTTGAAGCAATTGTCGC 60.660 50.000 7.40 13.31 45.06 5.19
566 577 1.337110 GCGTTGAAGCAATTGTCGCC 61.337 55.000 7.40 0.00 31.97 5.54
567 578 1.059657 CGTTGAAGCAATTGTCGCCG 61.060 55.000 7.40 0.77 0.00 6.46
568 579 0.040425 GTTGAAGCAATTGTCGCCGT 60.040 50.000 7.40 0.00 0.00 5.68
569 580 0.040514 TTGAAGCAATTGTCGCCGTG 60.041 50.000 7.40 0.00 0.00 4.94
570 581 1.797537 GAAGCAATTGTCGCCGTGC 60.798 57.895 7.40 0.00 37.26 5.34
571 582 2.456594 GAAGCAATTGTCGCCGTGCA 62.457 55.000 7.40 0.00 39.50 4.57
572 583 2.462255 AAGCAATTGTCGCCGTGCAG 62.462 55.000 7.40 0.00 39.50 4.41
573 584 2.945984 CAATTGTCGCCGTGCAGT 59.054 55.556 0.00 0.00 0.00 4.40
574 585 1.440850 CAATTGTCGCCGTGCAGTG 60.441 57.895 0.00 0.00 0.00 3.66
575 586 1.891919 AATTGTCGCCGTGCAGTGT 60.892 52.632 0.00 0.00 0.00 3.55
576 587 2.116736 AATTGTCGCCGTGCAGTGTG 62.117 55.000 0.00 0.00 0.00 3.82
581 592 4.409218 GCCGTGCAGTGTGCCATG 62.409 66.667 0.00 0.00 44.23 3.66
582 593 2.669229 CCGTGCAGTGTGCCATGA 60.669 61.111 0.00 0.00 44.23 3.07
583 594 2.683859 CCGTGCAGTGTGCCATGAG 61.684 63.158 0.00 0.00 44.23 2.90
584 595 2.683859 CGTGCAGTGTGCCATGAGG 61.684 63.158 0.00 0.00 44.23 3.86
585 596 2.034532 TGCAGTGTGCCATGAGGG 59.965 61.111 0.00 0.00 44.23 4.30
594 605 2.672908 CCATGAGGGCTGCAGTGA 59.327 61.111 16.64 0.00 0.00 3.41
595 606 1.001764 CCATGAGGGCTGCAGTGAA 60.002 57.895 16.64 0.00 0.00 3.18
596 607 1.030488 CCATGAGGGCTGCAGTGAAG 61.030 60.000 16.64 0.00 0.00 3.02
597 608 1.378250 ATGAGGGCTGCAGTGAAGC 60.378 57.895 15.46 15.46 40.06 3.86
598 609 1.849975 ATGAGGGCTGCAGTGAAGCT 61.850 55.000 22.65 3.53 40.64 3.74
599 610 1.303155 GAGGGCTGCAGTGAAGCTT 60.303 57.895 22.65 11.43 40.64 3.74
600 611 0.892814 GAGGGCTGCAGTGAAGCTTT 60.893 55.000 22.65 11.06 40.64 3.51
601 612 1.177256 AGGGCTGCAGTGAAGCTTTG 61.177 55.000 22.65 0.00 40.64 2.77
602 613 1.174712 GGGCTGCAGTGAAGCTTTGA 61.175 55.000 22.65 0.00 40.64 2.69
603 614 0.039708 GGCTGCAGTGAAGCTTTGAC 60.040 55.000 22.65 1.63 40.64 3.18
604 615 0.664761 GCTGCAGTGAAGCTTTGACA 59.335 50.000 16.52 0.00 37.69 3.58
605 616 1.334779 GCTGCAGTGAAGCTTTGACAG 60.335 52.381 16.52 8.27 37.69 3.51
606 617 1.266175 CTGCAGTGAAGCTTTGACAGG 59.734 52.381 5.25 0.00 34.99 4.00
607 618 0.595095 GCAGTGAAGCTTTGACAGGG 59.405 55.000 0.00 0.00 0.00 4.45
608 619 1.972872 CAGTGAAGCTTTGACAGGGT 58.027 50.000 0.00 0.00 0.00 4.34
609 620 1.605710 CAGTGAAGCTTTGACAGGGTG 59.394 52.381 0.00 0.00 0.00 4.61
610 621 0.312102 GTGAAGCTTTGACAGGGTGC 59.688 55.000 0.00 0.00 0.00 5.01
611 622 0.823356 TGAAGCTTTGACAGGGTGCC 60.823 55.000 0.00 0.00 0.00 5.01
612 623 0.823356 GAAGCTTTGACAGGGTGCCA 60.823 55.000 0.00 0.00 0.00 4.92
613 624 0.178953 AAGCTTTGACAGGGTGCCAT 60.179 50.000 0.00 0.00 0.00 4.40
614 625 0.178953 AGCTTTGACAGGGTGCCATT 60.179 50.000 0.00 0.00 0.00 3.16
615 626 1.075374 AGCTTTGACAGGGTGCCATTA 59.925 47.619 0.00 0.00 0.00 1.90
616 627 1.474077 GCTTTGACAGGGTGCCATTAG 59.526 52.381 0.00 0.00 0.00 1.73
617 628 1.474077 CTTTGACAGGGTGCCATTAGC 59.526 52.381 0.00 0.00 44.14 3.09
626 637 4.886925 GCCATTAGCGCCGCGTTG 62.887 66.667 15.34 2.49 0.00 4.10
627 638 3.192230 CCATTAGCGCCGCGTTGA 61.192 61.111 15.34 5.47 0.00 3.18
628 639 2.745785 CCATTAGCGCCGCGTTGAA 61.746 57.895 15.34 6.62 0.00 2.69
629 640 1.296867 CATTAGCGCCGCGTTGAAG 60.297 57.895 15.34 0.00 0.00 3.02
630 641 3.095898 ATTAGCGCCGCGTTGAAGC 62.096 57.895 15.34 0.00 0.00 3.86
639 650 4.409588 CGTTGAAGCGTCGCGTGG 62.410 66.667 11.21 0.00 0.00 4.94
640 651 3.335534 GTTGAAGCGTCGCGTGGT 61.336 61.111 11.21 2.51 0.00 4.16
641 652 3.033764 TTGAAGCGTCGCGTGGTC 61.034 61.111 11.21 8.23 0.00 4.02
644 655 4.936823 AAGCGTCGCGTGGTCGTT 62.937 61.111 12.30 2.69 39.49 3.85
647 658 3.324671 CGTCGCGTGGTCGTTGTT 61.325 61.111 5.77 0.00 39.49 2.83
648 659 2.244382 GTCGCGTGGTCGTTGTTG 59.756 61.111 5.77 0.00 39.49 3.33
649 660 3.632107 TCGCGTGGTCGTTGTTGC 61.632 61.111 5.77 0.00 39.49 4.17
650 661 4.659874 CGCGTGGTCGTTGTTGCC 62.660 66.667 0.00 0.00 39.49 4.52
651 662 4.659874 GCGTGGTCGTTGTTGCCG 62.660 66.667 0.00 0.00 39.49 5.69
652 663 3.266376 CGTGGTCGTTGTTGCCGT 61.266 61.111 0.00 0.00 0.00 5.68
653 664 2.326550 GTGGTCGTTGTTGCCGTG 59.673 61.111 0.00 0.00 0.00 4.94
654 665 2.897846 TGGTCGTTGTTGCCGTGG 60.898 61.111 0.00 0.00 0.00 4.94
655 666 4.322385 GGTCGTTGTTGCCGTGGC 62.322 66.667 3.30 3.30 42.35 5.01
656 667 4.659874 GTCGTTGTTGCCGTGGCG 62.660 66.667 6.37 0.00 45.51 5.69
658 669 4.244802 CGTTGTTGCCGTGGCGTT 62.245 61.111 6.37 0.00 45.51 4.84
659 670 2.653766 GTTGTTGCCGTGGCGTTG 60.654 61.111 6.37 0.00 45.51 4.10
660 671 4.560856 TTGTTGCCGTGGCGTTGC 62.561 61.111 6.37 0.00 45.51 4.17
662 673 4.980903 GTTGCCGTGGCGTTGCAG 62.981 66.667 6.37 0.00 45.51 4.41
667 678 4.374702 CGTGGCGTTGCAGCTGTC 62.375 66.667 16.64 8.39 37.29 3.51
668 679 4.374702 GTGGCGTTGCAGCTGTCG 62.375 66.667 16.64 17.71 37.29 4.35
671 682 4.077188 GCGTTGCAGCTGTCGGAC 62.077 66.667 16.64 0.00 0.00 4.79
672 683 3.767230 CGTTGCAGCTGTCGGACG 61.767 66.667 16.64 15.65 0.00 4.79
673 684 3.414700 GTTGCAGCTGTCGGACGG 61.415 66.667 16.64 12.66 0.00 4.79
679 690 2.260434 GCTGTCGGACGGCTACAA 59.740 61.111 29.80 0.00 46.62 2.41
680 691 1.805945 GCTGTCGGACGGCTACAAG 60.806 63.158 29.80 9.49 46.62 3.16
681 692 1.805945 CTGTCGGACGGCTACAAGC 60.806 63.158 3.65 0.00 41.46 4.01
682 693 2.879462 GTCGGACGGCTACAAGCG 60.879 66.667 0.00 0.00 43.62 4.68
683 694 4.789075 TCGGACGGCTACAAGCGC 62.789 66.667 0.00 0.00 43.62 5.92
688 699 4.083600 CGGCTACAAGCGCGCAAA 62.084 61.111 35.10 14.09 43.62 3.68
689 700 2.485122 GGCTACAAGCGCGCAAAT 59.515 55.556 35.10 19.73 43.62 2.32
690 701 1.583709 GGCTACAAGCGCGCAAATC 60.584 57.895 35.10 16.03 43.62 2.17
691 702 1.425428 GCTACAAGCGCGCAAATCT 59.575 52.632 35.10 9.38 0.00 2.40
692 703 0.858961 GCTACAAGCGCGCAAATCTG 60.859 55.000 35.10 22.27 0.00 2.90
693 704 0.721154 CTACAAGCGCGCAAATCTGA 59.279 50.000 35.10 10.29 0.00 3.27
694 705 0.442310 TACAAGCGCGCAAATCTGAC 59.558 50.000 35.10 0.00 0.00 3.51
695 706 1.860423 CAAGCGCGCAAATCTGACG 60.860 57.895 35.10 6.08 0.00 4.35
696 707 3.027170 AAGCGCGCAAATCTGACGG 62.027 57.895 35.10 0.00 0.00 4.79
698 709 3.490759 CGCGCAAATCTGACGGCT 61.491 61.111 8.75 0.00 0.00 5.52
699 710 2.099062 GCGCAAATCTGACGGCTG 59.901 61.111 0.30 0.00 0.00 4.85
700 711 2.787249 CGCAAATCTGACGGCTGG 59.213 61.111 0.00 0.00 0.00 4.85
701 712 2.486966 GCAAATCTGACGGCTGGC 59.513 61.111 0.00 0.00 0.00 4.85
702 713 2.042831 GCAAATCTGACGGCTGGCT 61.043 57.895 0.00 0.00 0.00 4.75
703 714 0.744414 GCAAATCTGACGGCTGGCTA 60.744 55.000 0.00 0.00 0.00 3.93
704 715 1.293924 CAAATCTGACGGCTGGCTAG 58.706 55.000 0.00 0.00 0.00 3.42
705 716 0.179000 AAATCTGACGGCTGGCTAGG 59.821 55.000 0.00 0.00 0.00 3.02
706 717 2.317149 AATCTGACGGCTGGCTAGGC 62.317 60.000 14.10 14.10 45.44 3.93
712 723 3.550431 GGCTGGCTAGGCGGATGA 61.550 66.667 28.19 0.82 39.88 2.92
713 724 2.746359 GCTGGCTAGGCGGATGAT 59.254 61.111 28.19 0.00 0.00 2.45
714 725 1.072159 GCTGGCTAGGCGGATGATT 59.928 57.895 28.19 0.00 0.00 2.57
715 726 0.536006 GCTGGCTAGGCGGATGATTT 60.536 55.000 28.19 0.00 0.00 2.17
716 727 1.972872 CTGGCTAGGCGGATGATTTT 58.027 50.000 20.19 0.00 0.00 1.82
717 728 1.876156 CTGGCTAGGCGGATGATTTTC 59.124 52.381 20.19 0.00 0.00 2.29
718 729 1.239347 GGCTAGGCGGATGATTTTCC 58.761 55.000 0.00 0.00 0.00 3.13
719 730 1.239347 GCTAGGCGGATGATTTTCCC 58.761 55.000 0.00 0.00 31.61 3.97
720 731 1.476833 GCTAGGCGGATGATTTTCCCA 60.477 52.381 0.00 0.00 31.61 4.37
721 732 2.815589 GCTAGGCGGATGATTTTCCCAT 60.816 50.000 0.00 0.00 31.61 4.00
722 733 1.696063 AGGCGGATGATTTTCCCATG 58.304 50.000 0.00 0.00 31.61 3.66
723 734 1.215173 AGGCGGATGATTTTCCCATGA 59.785 47.619 0.00 0.00 31.61 3.07
724 735 2.031120 GGCGGATGATTTTCCCATGAA 58.969 47.619 0.00 0.00 31.61 2.57
725 736 2.430332 GGCGGATGATTTTCCCATGAAA 59.570 45.455 0.00 0.00 38.69 2.69
726 737 3.070015 GGCGGATGATTTTCCCATGAAAT 59.930 43.478 0.00 0.00 40.08 2.17
727 738 4.301628 GCGGATGATTTTCCCATGAAATC 58.698 43.478 10.10 10.10 40.08 2.17
732 743 5.518848 TGATTTTCCCATGAAATCATCCG 57.481 39.130 14.02 0.00 44.30 4.18
733 744 4.341806 TGATTTTCCCATGAAATCATCCGG 59.658 41.667 14.02 0.00 44.30 5.14
734 745 1.691196 TTCCCATGAAATCATCCGGC 58.309 50.000 0.00 0.00 33.61 6.13
735 746 0.846015 TCCCATGAAATCATCCGGCT 59.154 50.000 0.00 0.00 33.61 5.52
736 747 1.215173 TCCCATGAAATCATCCGGCTT 59.785 47.619 0.00 0.00 33.61 4.35
737 748 2.441375 TCCCATGAAATCATCCGGCTTA 59.559 45.455 0.00 0.00 33.61 3.09
738 749 3.074390 TCCCATGAAATCATCCGGCTTAT 59.926 43.478 0.00 0.00 33.61 1.73
739 750 3.828451 CCCATGAAATCATCCGGCTTATT 59.172 43.478 0.00 0.00 33.61 1.40
740 751 4.281688 CCCATGAAATCATCCGGCTTATTT 59.718 41.667 0.00 0.00 33.61 1.40
741 752 5.224888 CCATGAAATCATCCGGCTTATTTG 58.775 41.667 2.30 0.00 33.61 2.32
742 753 5.221303 CCATGAAATCATCCGGCTTATTTGT 60.221 40.000 2.30 0.00 33.61 2.83
743 754 6.016360 CCATGAAATCATCCGGCTTATTTGTA 60.016 38.462 2.30 0.00 33.61 2.41
744 755 6.618287 TGAAATCATCCGGCTTATTTGTAG 57.382 37.500 2.30 0.00 0.00 2.74
745 756 5.008613 TGAAATCATCCGGCTTATTTGTAGC 59.991 40.000 2.30 0.00 37.91 3.58
746 757 3.552132 TCATCCGGCTTATTTGTAGCA 57.448 42.857 0.00 0.00 40.42 3.49
747 758 3.466836 TCATCCGGCTTATTTGTAGCAG 58.533 45.455 0.00 0.00 40.42 4.24
748 759 1.663695 TCCGGCTTATTTGTAGCAGC 58.336 50.000 0.00 0.00 40.42 5.25
751 762 0.029433 GGCTTATTTGTAGCAGCCGC 59.971 55.000 0.00 0.00 42.47 6.53
752 763 0.029433 GCTTATTTGTAGCAGCCGCC 59.971 55.000 0.00 0.00 39.83 6.13
753 764 1.378531 CTTATTTGTAGCAGCCGCCA 58.621 50.000 0.00 0.00 39.83 5.69
754 765 1.949525 CTTATTTGTAGCAGCCGCCAT 59.050 47.619 0.00 0.00 39.83 4.40
755 766 2.920724 TATTTGTAGCAGCCGCCATA 57.079 45.000 0.00 0.00 39.83 2.74
756 767 1.597742 ATTTGTAGCAGCCGCCATAG 58.402 50.000 0.00 0.00 39.83 2.23
757 768 0.463654 TTTGTAGCAGCCGCCATAGG 60.464 55.000 0.00 0.00 39.83 2.57
758 769 1.334384 TTGTAGCAGCCGCCATAGGA 61.334 55.000 0.00 0.00 39.83 2.94
759 770 1.334384 TGTAGCAGCCGCCATAGGAA 61.334 55.000 0.00 0.00 39.83 3.36
760 771 0.179056 GTAGCAGCCGCCATAGGAAA 60.179 55.000 0.00 0.00 39.83 3.13
761 772 0.544223 TAGCAGCCGCCATAGGAAAA 59.456 50.000 0.00 0.00 39.83 2.29
762 773 0.323360 AGCAGCCGCCATAGGAAAAA 60.323 50.000 0.00 0.00 39.83 1.94
763 774 0.179137 GCAGCCGCCATAGGAAAAAC 60.179 55.000 0.00 0.00 0.00 2.43
764 775 0.098728 CAGCCGCCATAGGAAAAACG 59.901 55.000 0.00 0.00 0.00 3.60
765 776 0.035820 AGCCGCCATAGGAAAAACGA 60.036 50.000 0.00 0.00 0.00 3.85
766 777 1.021968 GCCGCCATAGGAAAAACGAT 58.978 50.000 0.00 0.00 0.00 3.73
767 778 1.002792 GCCGCCATAGGAAAAACGATC 60.003 52.381 0.00 0.00 0.00 3.69
768 779 2.561569 CCGCCATAGGAAAAACGATCT 58.438 47.619 0.00 0.00 0.00 2.75
769 780 2.943033 CCGCCATAGGAAAAACGATCTT 59.057 45.455 0.00 0.00 0.00 2.40
770 781 4.124238 CCGCCATAGGAAAAACGATCTTA 58.876 43.478 0.00 0.00 0.00 2.10
771 782 4.755123 CCGCCATAGGAAAAACGATCTTAT 59.245 41.667 0.00 0.00 0.00 1.73
772 783 5.929992 CCGCCATAGGAAAAACGATCTTATA 59.070 40.000 0.00 0.00 0.00 0.98
773 784 6.594159 CCGCCATAGGAAAAACGATCTTATAT 59.406 38.462 0.00 0.00 0.00 0.86
774 785 7.119262 CCGCCATAGGAAAAACGATCTTATATT 59.881 37.037 0.00 0.00 0.00 1.28
775 786 7.957484 CGCCATAGGAAAAACGATCTTATATTG 59.043 37.037 0.00 0.00 0.00 1.90
776 787 8.784043 GCCATAGGAAAAACGATCTTATATTGT 58.216 33.333 0.00 0.00 0.00 2.71
780 791 8.801882 AGGAAAAACGATCTTATATTGTTGGA 57.198 30.769 0.00 0.00 0.00 3.53
781 792 8.674607 AGGAAAAACGATCTTATATTGTTGGAC 58.325 33.333 0.00 0.00 0.00 4.02
782 793 7.638683 GGAAAAACGATCTTATATTGTTGGACG 59.361 37.037 0.00 0.00 0.00 4.79
783 794 6.598753 AAACGATCTTATATTGTTGGACGG 57.401 37.500 0.00 0.00 0.00 4.79
784 795 5.524971 ACGATCTTATATTGTTGGACGGA 57.475 39.130 0.00 0.00 0.00 4.69
785 796 5.529791 ACGATCTTATATTGTTGGACGGAG 58.470 41.667 0.00 0.00 0.00 4.63
786 797 4.923871 CGATCTTATATTGTTGGACGGAGG 59.076 45.833 0.00 0.00 0.00 4.30
787 798 4.682778 TCTTATATTGTTGGACGGAGGG 57.317 45.455 0.00 0.00 0.00 4.30
788 799 4.291792 TCTTATATTGTTGGACGGAGGGA 58.708 43.478 0.00 0.00 0.00 4.20
789 800 4.344102 TCTTATATTGTTGGACGGAGGGAG 59.656 45.833 0.00 0.00 0.00 4.30
790 801 1.946984 TATTGTTGGACGGAGGGAGT 58.053 50.000 0.00 0.00 0.00 3.85
791 802 1.946984 ATTGTTGGACGGAGGGAGTA 58.053 50.000 0.00 0.00 0.00 2.59
792 803 1.263356 TTGTTGGACGGAGGGAGTAG 58.737 55.000 0.00 0.00 0.00 2.57
793 804 0.113776 TGTTGGACGGAGGGAGTAGT 59.886 55.000 0.00 0.00 0.00 2.73
794 805 1.355381 TGTTGGACGGAGGGAGTAGTA 59.645 52.381 0.00 0.00 0.00 1.82
795 806 2.225091 TGTTGGACGGAGGGAGTAGTAA 60.225 50.000 0.00 0.00 0.00 2.24
796 807 2.827921 GTTGGACGGAGGGAGTAGTAAA 59.172 50.000 0.00 0.00 0.00 2.01
797 808 3.173953 TGGACGGAGGGAGTAGTAAAA 57.826 47.619 0.00 0.00 0.00 1.52
798 809 3.716431 TGGACGGAGGGAGTAGTAAAAT 58.284 45.455 0.00 0.00 0.00 1.82
799 810 4.870636 TGGACGGAGGGAGTAGTAAAATA 58.129 43.478 0.00 0.00 0.00 1.40
800 811 5.461327 TGGACGGAGGGAGTAGTAAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
801 812 5.901276 TGGACGGAGGGAGTAGTAAAATATT 59.099 40.000 0.00 0.00 0.00 1.28
802 813 6.183360 TGGACGGAGGGAGTAGTAAAATATTG 60.183 42.308 0.00 0.00 0.00 1.90
803 814 6.041296 GGACGGAGGGAGTAGTAAAATATTGA 59.959 42.308 0.00 0.00 0.00 2.57
804 815 6.814043 ACGGAGGGAGTAGTAAAATATTGAC 58.186 40.000 0.00 0.00 0.00 3.18
805 816 6.183360 ACGGAGGGAGTAGTAAAATATTGACC 60.183 42.308 0.00 0.00 0.00 4.02
806 817 6.183360 CGGAGGGAGTAGTAAAATATTGACCA 60.183 42.308 0.00 0.00 0.00 4.02
807 818 7.571025 GGAGGGAGTAGTAAAATATTGACCAA 58.429 38.462 0.00 0.00 0.00 3.67
808 819 8.050930 GGAGGGAGTAGTAAAATATTGACCAAA 58.949 37.037 0.00 0.00 0.00 3.28
809 820 9.457436 GAGGGAGTAGTAAAATATTGACCAAAA 57.543 33.333 0.00 0.00 0.00 2.44
810 821 9.990868 AGGGAGTAGTAAAATATTGACCAAAAT 57.009 29.630 0.00 0.00 0.00 1.82
821 832 7.848223 ATATTGACCAAAATTTTAGCAAGCC 57.152 32.000 2.44 0.00 0.00 4.35
822 833 4.679373 TGACCAAAATTTTAGCAAGCCA 57.321 36.364 2.44 0.00 0.00 4.75
823 834 5.028549 TGACCAAAATTTTAGCAAGCCAA 57.971 34.783 2.44 0.00 0.00 4.52
824 835 5.431765 TGACCAAAATTTTAGCAAGCCAAA 58.568 33.333 2.44 0.00 0.00 3.28
825 836 6.060788 TGACCAAAATTTTAGCAAGCCAAAT 58.939 32.000 2.44 0.00 0.00 2.32
826 837 7.220030 TGACCAAAATTTTAGCAAGCCAAATA 58.780 30.769 2.44 0.00 0.00 1.40
827 838 7.882271 TGACCAAAATTTTAGCAAGCCAAATAT 59.118 29.630 2.44 0.00 0.00 1.28
828 839 8.634335 ACCAAAATTTTAGCAAGCCAAATATT 57.366 26.923 2.44 0.00 0.00 1.28
829 840 9.076781 ACCAAAATTTTAGCAAGCCAAATATTT 57.923 25.926 2.44 0.00 0.00 1.40
830 841 9.344309 CCAAAATTTTAGCAAGCCAAATATTTG 57.656 29.630 19.40 19.40 37.90 2.32
843 854 5.945466 CAAATATTTGGCAAGGCAAAGTT 57.055 34.783 23.07 17.67 34.59 2.66
845 856 7.064060 CAAATATTTGGCAAGGCAAAGTTAG 57.936 36.000 23.07 10.83 34.59 2.34
846 857 2.524569 TTTGGCAAGGCAAAGTTAGC 57.475 45.000 16.50 0.00 0.00 3.09
847 858 1.703411 TTGGCAAGGCAAAGTTAGCT 58.297 45.000 6.59 0.00 0.00 3.32
848 859 2.577606 TGGCAAGGCAAAGTTAGCTA 57.422 45.000 0.00 0.00 0.00 3.32
849 860 2.870175 TGGCAAGGCAAAGTTAGCTAA 58.130 42.857 0.86 0.86 0.00 3.09
850 861 3.226777 TGGCAAGGCAAAGTTAGCTAAA 58.773 40.909 7.99 0.00 0.00 1.85
851 862 3.639094 TGGCAAGGCAAAGTTAGCTAAAA 59.361 39.130 7.99 0.00 0.00 1.52
852 863 3.987868 GGCAAGGCAAAGTTAGCTAAAAC 59.012 43.478 7.99 0.00 0.00 2.43
853 864 3.987868 GCAAGGCAAAGTTAGCTAAAACC 59.012 43.478 7.99 5.66 0.00 3.27
854 865 4.500716 GCAAGGCAAAGTTAGCTAAAACCA 60.501 41.667 7.99 0.00 0.00 3.67
855 866 5.596845 CAAGGCAAAGTTAGCTAAAACCAA 58.403 37.500 7.99 0.00 0.00 3.67
856 867 6.223120 CAAGGCAAAGTTAGCTAAAACCAAT 58.777 36.000 7.99 0.00 0.00 3.16
857 868 6.025749 AGGCAAAGTTAGCTAAAACCAATC 57.974 37.500 7.99 0.00 0.00 2.67
858 869 5.538433 AGGCAAAGTTAGCTAAAACCAATCA 59.462 36.000 7.99 0.00 0.00 2.57
859 870 5.633601 GGCAAAGTTAGCTAAAACCAATCAC 59.366 40.000 7.99 0.00 0.00 3.06
860 871 5.342259 GCAAAGTTAGCTAAAACCAATCACG 59.658 40.000 7.99 0.00 0.00 4.35
861 872 6.664515 CAAAGTTAGCTAAAACCAATCACGA 58.335 36.000 7.99 0.00 0.00 4.35
862 873 5.857822 AGTTAGCTAAAACCAATCACGAC 57.142 39.130 7.99 0.00 0.00 4.34
863 874 4.694037 AGTTAGCTAAAACCAATCACGACC 59.306 41.667 7.99 0.00 0.00 4.79
864 875 2.073816 AGCTAAAACCAATCACGACCG 58.926 47.619 0.00 0.00 0.00 4.79
865 876 2.070783 GCTAAAACCAATCACGACCGA 58.929 47.619 0.00 0.00 0.00 4.69
866 877 2.481185 GCTAAAACCAATCACGACCGAA 59.519 45.455 0.00 0.00 0.00 4.30
867 878 3.424433 GCTAAAACCAATCACGACCGAAG 60.424 47.826 0.00 0.00 0.00 3.79
868 879 2.536761 AAACCAATCACGACCGAAGA 57.463 45.000 0.00 0.00 0.00 2.87
869 880 1.792006 AACCAATCACGACCGAAGAC 58.208 50.000 0.00 0.00 0.00 3.01
870 881 0.677288 ACCAATCACGACCGAAGACA 59.323 50.000 0.00 0.00 0.00 3.41
871 882 1.275291 ACCAATCACGACCGAAGACAT 59.725 47.619 0.00 0.00 0.00 3.06
872 883 1.927174 CCAATCACGACCGAAGACATC 59.073 52.381 0.00 0.00 0.00 3.06
886 897 5.059660 GAAGACATCGACGCTTTAAGATG 57.940 43.478 0.00 3.12 44.22 2.90
890 901 3.916255 CATCGACGCTTTAAGATGTGTG 58.084 45.455 0.00 0.00 36.62 3.82
891 902 3.021269 TCGACGCTTTAAGATGTGTGT 57.979 42.857 0.00 0.00 0.00 3.72
892 903 3.386486 TCGACGCTTTAAGATGTGTGTT 58.614 40.909 0.00 0.00 0.00 3.32
893 904 3.427528 TCGACGCTTTAAGATGTGTGTTC 59.572 43.478 0.00 0.00 0.00 3.18
894 905 3.423123 CGACGCTTTAAGATGTGTGTTCC 60.423 47.826 0.00 0.00 0.00 3.62
895 906 3.472652 ACGCTTTAAGATGTGTGTTCCA 58.527 40.909 0.00 0.00 0.00 3.53
896 907 3.250040 ACGCTTTAAGATGTGTGTTCCAC 59.750 43.478 0.00 0.00 44.78 4.02
907 918 4.900635 GTGTGTTCCACATGAGTTTTCT 57.099 40.909 0.00 0.00 46.32 2.52
908 919 5.248870 GTGTGTTCCACATGAGTTTTCTT 57.751 39.130 0.00 0.00 46.32 2.52
940 951 0.818296 GCCACGACTACCTCACTCAT 59.182 55.000 0.00 0.00 0.00 2.90
973 1012 6.633500 AAACTGAATTCAAAGGATCGACAA 57.367 33.333 9.88 0.00 0.00 3.18
977 1016 6.263168 ACTGAATTCAAAGGATCGACAAACTT 59.737 34.615 9.88 0.00 0.00 2.66
996 1035 3.118445 ACTTCAGAAGCTAGCTCCAATCC 60.118 47.826 19.65 3.60 0.00 3.01
1044 1086 2.662150 GCTAAAGGCGTTCGACGAT 58.338 52.632 10.82 0.00 46.05 3.73
1263 1323 1.622312 ACGGTAGGTTTCTTCCAGGTC 59.378 52.381 0.00 0.00 31.59 3.85
1310 1370 3.419759 GTCGGCGATGTTTGCGGT 61.420 61.111 14.79 0.00 34.63 5.68
1575 1706 3.826754 CTGCTGTCGGAGGCGCTA 61.827 66.667 7.64 0.00 33.37 4.26
2075 2261 9.896645 ATCTAATGAATCTCACACAAATGTACT 57.103 29.630 0.00 0.00 36.72 2.73
2076 2262 9.371136 TCTAATGAATCTCACACAAATGTACTC 57.629 33.333 0.00 0.00 36.72 2.59
2077 2263 6.992063 ATGAATCTCACACAAATGTACTCC 57.008 37.500 0.00 0.00 36.72 3.85
2078 2264 5.245531 TGAATCTCACACAAATGTACTCCC 58.754 41.667 0.00 0.00 36.72 4.30
2079 2265 3.313012 TCTCACACAAATGTACTCCCG 57.687 47.619 0.00 0.00 36.72 5.14
2080 2266 2.028476 TCTCACACAAATGTACTCCCGG 60.028 50.000 0.00 0.00 36.72 5.73
2081 2267 0.802494 CACACAAATGTACTCCCGGC 59.198 55.000 0.00 0.00 36.72 6.13
2082 2268 0.398696 ACACAAATGTACTCCCGGCA 59.601 50.000 0.00 0.00 37.26 5.69
2083 2269 0.802494 CACAAATGTACTCCCGGCAC 59.198 55.000 0.00 0.00 0.00 5.01
2084 2270 0.690762 ACAAATGTACTCCCGGCACT 59.309 50.000 0.00 0.00 0.00 4.40
2085 2271 1.903860 ACAAATGTACTCCCGGCACTA 59.096 47.619 0.00 0.00 0.00 2.74
2086 2272 2.277084 CAAATGTACTCCCGGCACTAC 58.723 52.381 0.00 0.00 0.00 2.73
2087 2273 1.563924 AATGTACTCCCGGCACTACA 58.436 50.000 0.00 0.41 0.00 2.74
2088 2274 1.112113 ATGTACTCCCGGCACTACAG 58.888 55.000 0.00 0.00 0.00 2.74
2089 2275 0.968901 TGTACTCCCGGCACTACAGG 60.969 60.000 0.00 0.00 0.00 4.00
2097 2283 2.044946 GCACTACAGGGCCAAGGG 60.045 66.667 6.18 1.81 0.00 3.95
2107 2293 4.344865 GCCAAGGGCCTCAACGGA 62.345 66.667 6.46 0.00 44.06 4.69
2108 2294 2.045926 CCAAGGGCCTCAACGGAG 60.046 66.667 6.46 0.00 41.02 4.63
2110 2296 1.550130 CCAAGGGCCTCAACGGAGTA 61.550 60.000 6.46 0.00 45.00 2.59
2127 2313 4.745125 CGGAGTATTTGTCGTGCTTATGAT 59.255 41.667 0.00 0.00 0.00 2.45
2135 2321 2.789893 GTCGTGCTTATGATCGGACTTC 59.210 50.000 0.00 0.00 0.00 3.01
2136 2322 2.425668 TCGTGCTTATGATCGGACTTCA 59.574 45.455 0.00 0.00 0.00 3.02
2139 2325 3.059325 GTGCTTATGATCGGACTTCATGC 60.059 47.826 4.70 2.00 35.50 4.06
2155 2341 3.900971 TCATGCTTGGGCTTGAATCATA 58.099 40.909 0.00 0.00 45.40 2.15
2169 2355 7.754027 GGCTTGAATCATAGTATGAATGAATGC 59.246 37.037 16.61 14.92 43.50 3.56
2274 2460 5.521735 AGATTGACTTCGTGCTTGTATCATC 59.478 40.000 0.00 0.00 0.00 2.92
2289 2475 8.310382 GCTTGTATCATCAGTAGAATATGGACT 58.690 37.037 0.00 0.00 0.00 3.85
2307 2493 6.452494 TGGACTACTAGAAATAGACAGTGC 57.548 41.667 0.00 0.00 0.00 4.40
2314 2500 4.992381 AGAAATAGACAGTGCGTTTGTC 57.008 40.909 6.88 6.88 44.09 3.18
2380 2566 5.352846 TCGATGCAGTTTTTATTTCCGATCA 59.647 36.000 0.00 0.00 0.00 2.92
2448 2641 2.307098 AGCATCTACAGCCAGGTCTTTT 59.693 45.455 0.00 0.00 0.00 2.27
2459 2652 3.370209 GCCAGGTCTTTTATACCCGTCTT 60.370 47.826 0.00 0.00 37.77 3.01
2506 2699 0.312416 TGCCCGGTCACAAAAATTCG 59.688 50.000 0.00 0.00 0.00 3.34
2527 2720 4.081309 TCGATCCAACCGGACTTCTTAAAT 60.081 41.667 9.46 0.00 46.79 1.40
2537 2730 4.086457 GGACTTCTTAAATGGGCCTCAAA 58.914 43.478 4.53 0.00 0.00 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 3.157252 GCCTGCATCGGGGAGAGA 61.157 66.667 0.00 0.00 37.05 3.10
47 48 2.296365 CCTGCTCTGCTTCCTCCCA 61.296 63.158 0.00 0.00 0.00 4.37
80 81 2.238395 GAGAGGGTGGAAGCAAATCTCT 59.762 50.000 0.00 0.00 37.15 3.10
94 95 1.394151 CAGGAAGGAGGGAGAGGGT 59.606 63.158 0.00 0.00 0.00 4.34
155 166 2.221169 CATCACCTCTCTCTCCTCTCG 58.779 57.143 0.00 0.00 0.00 4.04
220 231 0.804989 CTTGATTTGTGGTCTCCGGC 59.195 55.000 0.00 0.00 0.00 6.13
221 232 2.289694 ACTCTTGATTTGTGGTCTCCGG 60.290 50.000 0.00 0.00 0.00 5.14
222 233 3.045601 ACTCTTGATTTGTGGTCTCCG 57.954 47.619 0.00 0.00 0.00 4.63
245 256 2.125912 CGGTGGTCGGAGCAGAAG 60.126 66.667 10.61 1.31 34.75 2.85
273 284 1.089920 ATTGCAACTCATGGAGACGC 58.910 50.000 0.00 2.93 33.32 5.19
281 292 1.180029 GGTGCTCCATTGCAACTCAT 58.820 50.000 0.00 0.00 46.25 2.90
286 297 3.736100 CGCGGTGCTCCATTGCAA 61.736 61.111 0.00 0.00 45.12 4.08
288 299 4.465512 CACGCGGTGCTCCATTGC 62.466 66.667 12.47 0.00 0.00 3.56
301 312 3.726517 ACCATCGCAACAGCACGC 61.727 61.111 0.00 0.00 0.00 5.34
302 313 2.174107 CACCATCGCAACAGCACG 59.826 61.111 0.00 0.00 0.00 5.34
303 314 1.207593 GTCACCATCGCAACAGCAC 59.792 57.895 0.00 0.00 0.00 4.40
304 315 1.965930 GGTCACCATCGCAACAGCA 60.966 57.895 0.00 0.00 0.00 4.41
305 316 2.870372 GGTCACCATCGCAACAGC 59.130 61.111 0.00 0.00 0.00 4.40
306 317 3.168271 CGGTCACCATCGCAACAG 58.832 61.111 0.00 0.00 0.00 3.16
345 356 3.869272 CATCGCCGGAGTTGCAGC 61.869 66.667 5.05 0.00 0.00 5.25
346 357 2.034879 AACATCGCCGGAGTTGCAG 61.035 57.895 15.24 0.68 0.00 4.41
347 358 2.031919 AACATCGCCGGAGTTGCA 59.968 55.556 15.24 0.00 0.00 4.08
348 359 2.480555 CAACATCGCCGGAGTTGC 59.519 61.111 15.24 0.00 36.59 4.17
349 360 2.480555 GCAACATCGCCGGAGTTG 59.519 61.111 5.05 14.89 44.01 3.16
350 361 2.746277 GGCAACATCGCCGGAGTT 60.746 61.111 5.05 0.09 43.52 3.01
357 368 2.103042 AGCTTCGAGGCAACATCGC 61.103 57.895 22.42 0.00 39.98 4.58
358 369 1.016130 ACAGCTTCGAGGCAACATCG 61.016 55.000 22.42 5.08 41.50 3.84
359 370 0.723981 GACAGCTTCGAGGCAACATC 59.276 55.000 22.42 9.16 41.41 3.06
360 371 0.035317 TGACAGCTTCGAGGCAACAT 59.965 50.000 22.42 3.39 41.41 2.71
361 372 0.601046 CTGACAGCTTCGAGGCAACA 60.601 55.000 22.42 15.81 41.41 3.33
362 373 1.294659 CCTGACAGCTTCGAGGCAAC 61.295 60.000 22.42 12.20 34.17 4.17
363 374 1.004560 CCTGACAGCTTCGAGGCAA 60.005 57.895 22.42 3.32 34.17 4.52
364 375 2.659016 CCTGACAGCTTCGAGGCA 59.341 61.111 22.42 0.00 34.17 4.75
365 376 2.125350 CCCTGACAGCTTCGAGGC 60.125 66.667 12.25 12.25 0.00 4.70
366 377 1.515020 CTCCCTGACAGCTTCGAGG 59.485 63.158 0.00 0.00 0.00 4.63
367 378 1.153667 GCTCCCTGACAGCTTCGAG 60.154 63.158 0.00 0.35 33.75 4.04
368 379 1.908299 TGCTCCCTGACAGCTTCGA 60.908 57.895 0.00 0.00 37.79 3.71
369 380 1.739562 GTGCTCCCTGACAGCTTCG 60.740 63.158 0.00 0.00 37.79 3.79
370 381 1.376553 GGTGCTCCCTGACAGCTTC 60.377 63.158 0.00 0.00 37.79 3.86
371 382 2.753029 GGTGCTCCCTGACAGCTT 59.247 61.111 0.00 0.00 37.79 3.74
372 383 3.699894 CGGTGCTCCCTGACAGCT 61.700 66.667 0.00 0.00 37.79 4.24
374 385 3.699894 AGCGGTGCTCCCTGACAG 61.700 66.667 0.00 0.00 30.62 3.51
375 386 4.007644 CAGCGGTGCTCCCTGACA 62.008 66.667 14.54 0.00 36.40 3.58
385 396 1.731613 CATTGCAACAGCAGCGGTG 60.732 57.895 10.98 10.98 39.82 4.94
386 397 2.646719 CATTGCAACAGCAGCGGT 59.353 55.556 0.00 0.00 39.82 5.68
387 398 2.126228 CCATTGCAACAGCAGCGG 60.126 61.111 0.00 0.00 39.82 5.52
388 399 1.154093 CTCCATTGCAACAGCAGCG 60.154 57.895 0.00 0.00 39.82 5.18
389 400 1.445582 GCTCCATTGCAACAGCAGC 60.446 57.895 17.80 10.54 39.82 5.25
390 401 1.154093 CGCTCCATTGCAACAGCAG 60.154 57.895 20.89 12.76 39.82 4.24
391 402 1.600356 TCGCTCCATTGCAACAGCA 60.600 52.632 20.89 9.78 36.26 4.41
392 403 1.154150 GTCGCTCCATTGCAACAGC 60.154 57.895 0.00 9.06 0.00 4.40
393 404 1.133253 CGTCGCTCCATTGCAACAG 59.867 57.895 0.00 0.00 0.00 3.16
394 405 2.965147 GCGTCGCTCCATTGCAACA 61.965 57.895 10.68 0.00 0.00 3.33
395 406 2.202349 GCGTCGCTCCATTGCAAC 60.202 61.111 10.68 0.00 0.00 4.17
396 407 3.430862 GGCGTCGCTCCATTGCAA 61.431 61.111 18.11 0.00 0.00 4.08
412 423 2.978452 CTATGCTTCCAGCGACCCGG 62.978 65.000 0.00 0.00 46.26 5.73
413 424 1.592669 CTATGCTTCCAGCGACCCG 60.593 63.158 0.00 0.00 46.26 5.28
414 425 1.889573 GCTATGCTTCCAGCGACCC 60.890 63.158 0.00 0.00 46.26 4.46
415 426 3.724494 GCTATGCTTCCAGCGACC 58.276 61.111 0.00 0.00 46.26 4.79
419 430 3.282920 GCCCGCTATGCTTCCAGC 61.283 66.667 0.00 0.00 42.82 4.85
420 431 2.969238 CGCCCGCTATGCTTCCAG 60.969 66.667 0.00 0.00 0.00 3.86
434 445 3.407046 GAAGCTCCATTGCAGCGCC 62.407 63.158 2.29 0.00 42.14 6.53
435 446 2.101770 GAAGCTCCATTGCAGCGC 59.898 61.111 0.00 0.00 42.14 5.92
436 447 2.402388 CGAAGCTCCATTGCAGCG 59.598 61.111 0.00 0.00 42.14 5.18
449 460 2.343101 TCCATTACAACTTCGGCGAAG 58.657 47.619 39.38 39.38 44.37 3.79
450 461 2.343101 CTCCATTACAACTTCGGCGAA 58.657 47.619 22.33 22.33 0.00 4.70
451 462 2.004583 CTCCATTACAACTTCGGCGA 57.995 50.000 4.99 4.99 0.00 5.54
452 463 0.373716 GCTCCATTACAACTTCGGCG 59.626 55.000 0.00 0.00 0.00 6.46
453 464 1.739067 AGCTCCATTACAACTTCGGC 58.261 50.000 0.00 0.00 0.00 5.54
456 467 3.060895 CGACGAAGCTCCATTACAACTTC 59.939 47.826 0.00 0.00 34.71 3.01
457 468 2.993899 CGACGAAGCTCCATTACAACTT 59.006 45.455 0.00 0.00 0.00 2.66
458 469 2.607187 CGACGAAGCTCCATTACAACT 58.393 47.619 0.00 0.00 0.00 3.16
459 470 1.659098 CCGACGAAGCTCCATTACAAC 59.341 52.381 0.00 0.00 0.00 3.32
460 471 2.004583 CCGACGAAGCTCCATTACAA 57.995 50.000 0.00 0.00 0.00 2.41
461 472 0.459585 GCCGACGAAGCTCCATTACA 60.460 55.000 0.00 0.00 0.00 2.41
462 473 1.480219 CGCCGACGAAGCTCCATTAC 61.480 60.000 0.00 0.00 43.93 1.89
463 474 1.226859 CGCCGACGAAGCTCCATTA 60.227 57.895 0.00 0.00 43.93 1.90
464 475 2.509336 CGCCGACGAAGCTCCATT 60.509 61.111 0.00 0.00 43.93 3.16
471 482 4.847516 TCGATGGCGCCGACGAAG 62.848 66.667 33.60 18.20 43.93 3.79
472 483 4.201679 ATCGATGGCGCCGACGAA 62.202 61.111 36.82 25.45 43.93 3.85
473 484 4.923710 CATCGATGGCGCCGACGA 62.924 66.667 35.91 35.91 43.93 4.20
481 492 2.023741 CAACGCAGCATCGATGGC 59.976 61.111 26.00 19.79 0.00 4.40
482 493 2.711311 CCAACGCAGCATCGATGG 59.289 61.111 26.00 12.02 43.92 3.51
483 494 1.640069 CTCCAACGCAGCATCGATG 59.360 57.895 21.27 21.27 32.99 3.84
484 495 2.176273 GCTCCAACGCAGCATCGAT 61.176 57.895 4.64 0.00 36.82 3.59
485 496 2.815211 GCTCCAACGCAGCATCGA 60.815 61.111 4.64 0.00 36.82 3.59
486 497 2.806856 GAGCTCCAACGCAGCATCG 61.807 63.158 0.87 0.00 39.56 3.84
487 498 2.467826 GGAGCTCCAACGCAGCATC 61.468 63.158 28.43 0.00 39.56 3.91
488 499 2.437359 GGAGCTCCAACGCAGCAT 60.437 61.111 28.43 0.00 39.56 3.79
535 546 0.317436 TTCAACGCAACATCGGCAAC 60.317 50.000 0.00 0.00 0.00 4.17
536 547 0.040514 CTTCAACGCAACATCGGCAA 60.041 50.000 0.00 0.00 0.00 4.52
537 548 1.573932 CTTCAACGCAACATCGGCA 59.426 52.632 0.00 0.00 0.00 5.69
538 549 1.797537 GCTTCAACGCAACATCGGC 60.798 57.895 0.00 0.00 0.00 5.54
539 550 0.040514 TTGCTTCAACGCAACATCGG 60.041 50.000 0.00 0.00 44.30 4.18
540 551 3.453222 TTGCTTCAACGCAACATCG 57.547 47.368 0.00 0.00 44.30 3.84
546 557 0.660005 GCGACAATTGCTTCAACGCA 60.660 50.000 5.05 0.00 43.18 5.24
547 558 1.337110 GGCGACAATTGCTTCAACGC 61.337 55.000 5.05 12.51 43.00 4.84
548 559 1.059657 CGGCGACAATTGCTTCAACG 61.060 55.000 0.00 3.72 0.00 4.10
549 560 0.040425 ACGGCGACAATTGCTTCAAC 60.040 50.000 16.62 0.00 0.00 3.18
550 561 0.040514 CACGGCGACAATTGCTTCAA 60.041 50.000 16.62 0.00 0.00 2.69
551 562 1.573932 CACGGCGACAATTGCTTCA 59.426 52.632 16.62 0.00 0.00 3.02
552 563 1.797537 GCACGGCGACAATTGCTTC 60.798 57.895 16.62 0.00 32.00 3.86
553 564 2.255252 GCACGGCGACAATTGCTT 59.745 55.556 16.62 0.00 32.00 3.91
554 565 2.969806 CTGCACGGCGACAATTGCT 61.970 57.895 16.62 0.00 35.91 3.91
555 566 2.502510 CTGCACGGCGACAATTGC 60.503 61.111 16.62 13.75 35.45 3.56
556 567 1.440850 CACTGCACGGCGACAATTG 60.441 57.895 16.62 3.24 0.00 2.32
557 568 1.891919 ACACTGCACGGCGACAATT 60.892 52.632 16.62 0.00 0.00 2.32
558 569 2.280797 ACACTGCACGGCGACAAT 60.281 55.556 16.62 0.00 0.00 2.71
559 570 3.268603 CACACTGCACGGCGACAA 61.269 61.111 16.62 0.00 0.00 3.18
577 588 1.001764 TTCACTGCAGCCCTCATGG 60.002 57.895 15.27 0.00 37.09 3.66
578 589 1.654954 GCTTCACTGCAGCCCTCATG 61.655 60.000 15.27 3.19 0.00 3.07
579 590 1.378250 GCTTCACTGCAGCCCTCAT 60.378 57.895 15.27 0.00 0.00 2.90
580 591 2.033141 GCTTCACTGCAGCCCTCA 59.967 61.111 15.27 0.00 0.00 3.86
581 592 0.892814 AAAGCTTCACTGCAGCCCTC 60.893 55.000 15.27 0.00 38.09 4.30
582 593 1.152368 AAAGCTTCACTGCAGCCCT 59.848 52.632 15.27 0.00 38.09 5.19
583 594 1.174712 TCAAAGCTTCACTGCAGCCC 61.175 55.000 15.27 0.00 38.09 5.19
584 595 0.039708 GTCAAAGCTTCACTGCAGCC 60.040 55.000 15.27 0.00 38.09 4.85
585 596 0.664761 TGTCAAAGCTTCACTGCAGC 59.335 50.000 15.27 0.00 37.56 5.25
586 597 1.266175 CCTGTCAAAGCTTCACTGCAG 59.734 52.381 13.48 13.48 34.99 4.41
587 598 1.311859 CCTGTCAAAGCTTCACTGCA 58.688 50.000 0.00 0.00 34.99 4.41
588 599 0.595095 CCCTGTCAAAGCTTCACTGC 59.405 55.000 0.00 0.00 0.00 4.40
589 600 1.605710 CACCCTGTCAAAGCTTCACTG 59.394 52.381 0.00 4.01 0.00 3.66
590 601 1.972872 CACCCTGTCAAAGCTTCACT 58.027 50.000 0.00 0.00 0.00 3.41
591 602 0.312102 GCACCCTGTCAAAGCTTCAC 59.688 55.000 0.00 0.00 0.00 3.18
592 603 0.823356 GGCACCCTGTCAAAGCTTCA 60.823 55.000 0.00 0.00 0.00 3.02
593 604 0.823356 TGGCACCCTGTCAAAGCTTC 60.823 55.000 0.00 0.00 0.00 3.86
594 605 0.178953 ATGGCACCCTGTCAAAGCTT 60.179 50.000 0.00 0.00 34.67 3.74
595 606 0.178953 AATGGCACCCTGTCAAAGCT 60.179 50.000 0.00 0.00 34.67 3.74
596 607 1.474077 CTAATGGCACCCTGTCAAAGC 59.526 52.381 0.00 0.00 34.67 3.51
597 608 1.474077 GCTAATGGCACCCTGTCAAAG 59.526 52.381 0.00 0.00 34.67 2.77
598 609 1.544724 GCTAATGGCACCCTGTCAAA 58.455 50.000 0.00 0.00 34.67 2.69
599 610 0.676466 CGCTAATGGCACCCTGTCAA 60.676 55.000 0.00 0.00 34.67 3.18
600 611 1.078497 CGCTAATGGCACCCTGTCA 60.078 57.895 0.00 0.00 41.91 3.58
601 612 2.472909 GCGCTAATGGCACCCTGTC 61.473 63.158 0.00 0.00 41.91 3.51
602 613 2.438434 GCGCTAATGGCACCCTGT 60.438 61.111 0.00 0.00 41.91 4.00
603 614 3.211963 GGCGCTAATGGCACCCTG 61.212 66.667 7.64 0.00 41.91 4.45
604 615 4.856801 CGGCGCTAATGGCACCCT 62.857 66.667 7.64 0.00 39.83 4.34
609 620 4.886925 CAACGCGGCGCTAATGGC 62.887 66.667 30.54 0.00 37.64 4.40
610 621 2.631696 CTTCAACGCGGCGCTAATGG 62.632 60.000 30.54 16.27 0.00 3.16
611 622 1.296867 CTTCAACGCGGCGCTAATG 60.297 57.895 30.54 23.48 0.00 1.90
612 623 3.089784 CTTCAACGCGGCGCTAAT 58.910 55.556 30.54 12.51 0.00 1.73
613 624 3.784412 GCTTCAACGCGGCGCTAA 61.784 61.111 30.54 16.58 0.00 3.09
622 633 4.409588 CCACGCGACGCTTCAACG 62.410 66.667 15.93 3.27 39.50 4.10
623 634 3.277742 GACCACGCGACGCTTCAAC 62.278 63.158 15.93 2.98 0.00 3.18
624 635 3.033764 GACCACGCGACGCTTCAA 61.034 61.111 15.93 0.00 0.00 2.69
627 638 4.936823 AACGACCACGCGACGCTT 62.937 61.111 15.93 5.43 43.96 4.68
630 641 3.324671 AACAACGACCACGCGACG 61.325 61.111 15.93 15.16 43.96 5.12
631 642 2.244382 CAACAACGACCACGCGAC 59.756 61.111 15.93 0.00 43.96 5.19
632 643 3.632107 GCAACAACGACCACGCGA 61.632 61.111 15.93 0.00 43.96 5.87
633 644 4.659874 GGCAACAACGACCACGCG 62.660 66.667 3.53 3.53 43.96 6.01
634 645 4.659874 CGGCAACAACGACCACGC 62.660 66.667 0.00 0.00 43.96 5.34
635 646 3.266376 ACGGCAACAACGACCACG 61.266 61.111 0.00 0.00 45.75 4.94
636 647 2.326550 CACGGCAACAACGACCAC 59.673 61.111 0.00 0.00 34.93 4.16
637 648 2.897846 CCACGGCAACAACGACCA 60.898 61.111 0.00 0.00 34.93 4.02
638 649 4.322385 GCCACGGCAACAACGACC 62.322 66.667 2.36 0.00 41.49 4.79
639 650 4.659874 CGCCACGGCAACAACGAC 62.660 66.667 9.11 0.00 42.06 4.34
641 652 4.244802 AACGCCACGGCAACAACG 62.245 61.111 9.11 0.00 42.06 4.10
642 653 2.653766 CAACGCCACGGCAACAAC 60.654 61.111 9.11 0.00 42.06 3.32
643 654 4.560856 GCAACGCCACGGCAACAA 62.561 61.111 9.11 0.00 42.06 2.83
645 656 4.980903 CTGCAACGCCACGGCAAC 62.981 66.667 9.11 0.00 42.06 4.17
650 661 4.374702 GACAGCTGCAACGCCACG 62.375 66.667 15.27 0.00 0.00 4.94
651 662 4.374702 CGACAGCTGCAACGCCAC 62.375 66.667 15.27 0.00 0.00 5.01
654 665 4.077188 GTCCGACAGCTGCAACGC 62.077 66.667 15.27 2.38 0.00 4.84
655 666 3.767230 CGTCCGACAGCTGCAACG 61.767 66.667 15.27 16.65 0.00 4.10
656 667 3.414700 CCGTCCGACAGCTGCAAC 61.415 66.667 15.27 5.97 0.00 4.17
659 670 4.129737 TAGCCGTCCGACAGCTGC 62.130 66.667 17.86 5.81 37.45 5.25
660 671 2.202623 GTAGCCGTCCGACAGCTG 60.203 66.667 17.86 13.48 37.45 4.24
661 672 2.214181 CTTGTAGCCGTCCGACAGCT 62.214 60.000 13.67 13.67 40.66 4.24
662 673 1.805945 CTTGTAGCCGTCCGACAGC 60.806 63.158 0.00 0.00 30.59 4.40
663 674 1.805945 GCTTGTAGCCGTCCGACAG 60.806 63.158 0.00 0.00 34.48 3.51
664 675 2.260434 GCTTGTAGCCGTCCGACA 59.740 61.111 0.00 0.00 34.48 4.35
665 676 2.879462 CGCTTGTAGCCGTCCGAC 60.879 66.667 0.00 0.00 38.18 4.79
666 677 4.789075 GCGCTTGTAGCCGTCCGA 62.789 66.667 0.00 0.00 38.18 4.55
671 682 3.381169 ATTTGCGCGCTTGTAGCCG 62.381 57.895 33.29 0.00 38.18 5.52
672 683 1.583709 GATTTGCGCGCTTGTAGCC 60.584 57.895 33.29 10.84 38.18 3.93
673 684 0.858961 CAGATTTGCGCGCTTGTAGC 60.859 55.000 33.29 16.62 38.02 3.58
674 685 0.721154 TCAGATTTGCGCGCTTGTAG 59.279 50.000 33.29 17.18 0.00 2.74
675 686 0.442310 GTCAGATTTGCGCGCTTGTA 59.558 50.000 33.29 14.76 0.00 2.41
676 687 1.207593 GTCAGATTTGCGCGCTTGT 59.792 52.632 33.29 17.45 0.00 3.16
677 688 1.860423 CGTCAGATTTGCGCGCTTG 60.860 57.895 33.29 20.60 0.00 4.01
678 689 2.476051 CGTCAGATTTGCGCGCTT 59.524 55.556 33.29 17.16 0.00 4.68
679 690 3.490759 CCGTCAGATTTGCGCGCT 61.491 61.111 33.29 12.78 0.00 5.92
681 692 3.490759 AGCCGTCAGATTTGCGCG 61.491 61.111 0.00 0.00 0.00 6.86
682 693 2.099062 CAGCCGTCAGATTTGCGC 59.901 61.111 0.00 0.00 0.00 6.09
683 694 2.787249 CCAGCCGTCAGATTTGCG 59.213 61.111 0.00 0.00 0.00 4.85
684 695 0.744414 TAGCCAGCCGTCAGATTTGC 60.744 55.000 0.00 0.00 0.00 3.68
685 696 1.293924 CTAGCCAGCCGTCAGATTTG 58.706 55.000 0.00 0.00 0.00 2.32
686 697 0.179000 CCTAGCCAGCCGTCAGATTT 59.821 55.000 0.00 0.00 0.00 2.17
687 698 1.826024 CCTAGCCAGCCGTCAGATT 59.174 57.895 0.00 0.00 0.00 2.40
688 699 2.801631 GCCTAGCCAGCCGTCAGAT 61.802 63.158 0.00 0.00 0.00 2.90
689 700 3.461773 GCCTAGCCAGCCGTCAGA 61.462 66.667 0.00 0.00 0.00 3.27
690 701 4.880537 CGCCTAGCCAGCCGTCAG 62.881 72.222 0.00 0.00 0.00 3.51
694 705 4.976925 CATCCGCCTAGCCAGCCG 62.977 72.222 0.00 0.00 0.00 5.52
695 706 2.403132 AATCATCCGCCTAGCCAGCC 62.403 60.000 0.00 0.00 0.00 4.85
696 707 0.536006 AAATCATCCGCCTAGCCAGC 60.536 55.000 0.00 0.00 0.00 4.85
697 708 1.876156 GAAAATCATCCGCCTAGCCAG 59.124 52.381 0.00 0.00 0.00 4.85
698 709 1.476833 GGAAAATCATCCGCCTAGCCA 60.477 52.381 0.00 0.00 0.00 4.75
699 710 1.239347 GGAAAATCATCCGCCTAGCC 58.761 55.000 0.00 0.00 0.00 3.93
700 711 1.239347 GGGAAAATCATCCGCCTAGC 58.761 55.000 0.00 0.00 40.62 3.42
701 712 2.638480 TGGGAAAATCATCCGCCTAG 57.362 50.000 0.00 0.00 40.62 3.02
702 713 2.441375 TCATGGGAAAATCATCCGCCTA 59.559 45.455 0.00 0.00 40.62 3.93
703 714 1.215173 TCATGGGAAAATCATCCGCCT 59.785 47.619 0.00 0.00 40.62 5.52
704 715 1.691196 TCATGGGAAAATCATCCGCC 58.309 50.000 0.00 0.00 40.62 6.13
705 716 3.799281 TTTCATGGGAAAATCATCCGC 57.201 42.857 0.00 0.00 39.96 5.54
706 717 5.518848 TGATTTCATGGGAAAATCATCCG 57.481 39.130 14.02 0.00 45.52 4.18
708 719 6.154445 CGGATGATTTCATGGGAAAATCATC 58.846 40.000 30.68 30.68 45.52 2.92
709 720 5.011329 CCGGATGATTTCATGGGAAAATCAT 59.989 40.000 23.57 23.57 45.52 2.45
710 721 4.341806 CCGGATGATTTCATGGGAAAATCA 59.658 41.667 18.18 18.18 45.52 2.57
711 722 4.797275 GCCGGATGATTTCATGGGAAAATC 60.797 45.833 5.05 10.10 45.52 2.17
712 723 3.070015 GCCGGATGATTTCATGGGAAAAT 59.930 43.478 5.05 0.00 45.52 1.82
713 724 2.430332 GCCGGATGATTTCATGGGAAAA 59.570 45.455 5.05 0.00 45.52 2.29
714 725 2.031120 GCCGGATGATTTCATGGGAAA 58.969 47.619 5.05 0.00 46.36 3.13
715 726 1.215173 AGCCGGATGATTTCATGGGAA 59.785 47.619 5.05 0.00 36.57 3.97
716 727 0.846015 AGCCGGATGATTTCATGGGA 59.154 50.000 5.05 0.00 36.57 4.37
717 728 1.696063 AAGCCGGATGATTTCATGGG 58.304 50.000 5.05 0.88 36.57 4.00
718 729 5.221303 ACAAATAAGCCGGATGATTTCATGG 60.221 40.000 12.29 4.22 36.57 3.66
719 730 5.835257 ACAAATAAGCCGGATGATTTCATG 58.165 37.500 12.29 5.29 36.57 3.07
720 731 6.294176 GCTACAAATAAGCCGGATGATTTCAT 60.294 38.462 12.29 6.56 35.07 2.57
721 732 5.008613 GCTACAAATAAGCCGGATGATTTCA 59.991 40.000 12.29 2.94 33.73 2.69
722 733 5.008613 TGCTACAAATAAGCCGGATGATTTC 59.991 40.000 12.29 2.28 39.30 2.17
723 734 4.887071 TGCTACAAATAAGCCGGATGATTT 59.113 37.500 9.35 9.35 39.30 2.17
724 735 4.460263 TGCTACAAATAAGCCGGATGATT 58.540 39.130 5.05 0.00 39.30 2.57
725 736 4.067896 CTGCTACAAATAAGCCGGATGAT 58.932 43.478 5.05 0.00 39.30 2.45
726 737 3.466836 CTGCTACAAATAAGCCGGATGA 58.533 45.455 5.05 0.00 39.30 2.92
727 738 2.031682 GCTGCTACAAATAAGCCGGATG 60.032 50.000 5.05 0.00 39.30 3.51
728 739 2.222027 GCTGCTACAAATAAGCCGGAT 58.778 47.619 5.05 0.00 39.30 4.18
729 740 1.663695 GCTGCTACAAATAAGCCGGA 58.336 50.000 5.05 0.00 39.30 5.14
730 741 0.663153 GGCTGCTACAAATAAGCCGG 59.337 55.000 0.00 0.00 45.30 6.13
733 744 0.029433 GGCGGCTGCTACAAATAAGC 59.971 55.000 18.85 0.00 42.25 3.09
734 745 1.378531 TGGCGGCTGCTACAAATAAG 58.621 50.000 18.85 0.00 42.25 1.73
735 746 2.051334 ATGGCGGCTGCTACAAATAA 57.949 45.000 18.85 0.00 42.25 1.40
736 747 2.549992 CCTATGGCGGCTGCTACAAATA 60.550 50.000 18.85 7.25 42.25 1.40
737 748 1.597742 CTATGGCGGCTGCTACAAAT 58.402 50.000 18.85 6.47 42.25 2.32
738 749 0.463654 CCTATGGCGGCTGCTACAAA 60.464 55.000 18.85 0.00 42.25 2.83
739 750 1.146041 CCTATGGCGGCTGCTACAA 59.854 57.895 18.85 2.28 42.25 2.41
740 751 1.334384 TTCCTATGGCGGCTGCTACA 61.334 55.000 18.85 8.34 42.25 2.74
741 752 0.179056 TTTCCTATGGCGGCTGCTAC 60.179 55.000 18.85 1.54 42.25 3.58
742 753 0.544223 TTTTCCTATGGCGGCTGCTA 59.456 50.000 18.85 12.85 42.25 3.49
743 754 0.323360 TTTTTCCTATGGCGGCTGCT 60.323 50.000 18.85 0.00 42.25 4.24
744 755 0.179137 GTTTTTCCTATGGCGGCTGC 60.179 55.000 9.72 9.72 41.71 5.25
745 756 0.098728 CGTTTTTCCTATGGCGGCTG 59.901 55.000 11.43 0.03 0.00 4.85
746 757 0.035820 TCGTTTTTCCTATGGCGGCT 60.036 50.000 11.43 0.00 0.00 5.52
747 758 1.002792 GATCGTTTTTCCTATGGCGGC 60.003 52.381 0.00 0.00 0.00 6.53
748 759 2.561569 AGATCGTTTTTCCTATGGCGG 58.438 47.619 0.00 0.00 0.00 6.13
749 760 5.924475 ATAAGATCGTTTTTCCTATGGCG 57.076 39.130 0.00 0.00 0.00 5.69
750 761 8.784043 ACAATATAAGATCGTTTTTCCTATGGC 58.216 33.333 0.00 0.00 0.00 4.40
754 765 9.893634 TCCAACAATATAAGATCGTTTTTCCTA 57.106 29.630 0.00 0.00 0.00 2.94
755 766 8.674607 GTCCAACAATATAAGATCGTTTTTCCT 58.325 33.333 0.00 0.00 0.00 3.36
756 767 7.638683 CGTCCAACAATATAAGATCGTTTTTCC 59.361 37.037 0.00 0.00 0.00 3.13
757 768 7.638683 CCGTCCAACAATATAAGATCGTTTTTC 59.361 37.037 0.00 0.00 0.00 2.29
758 769 7.334921 TCCGTCCAACAATATAAGATCGTTTTT 59.665 33.333 0.00 0.00 0.00 1.94
759 770 6.819649 TCCGTCCAACAATATAAGATCGTTTT 59.180 34.615 0.00 0.00 0.00 2.43
760 771 6.342906 TCCGTCCAACAATATAAGATCGTTT 58.657 36.000 0.00 0.00 0.00 3.60
761 772 5.909477 TCCGTCCAACAATATAAGATCGTT 58.091 37.500 0.00 0.00 0.00 3.85
762 773 5.509163 CCTCCGTCCAACAATATAAGATCGT 60.509 44.000 0.00 0.00 0.00 3.73
763 774 4.923871 CCTCCGTCCAACAATATAAGATCG 59.076 45.833 0.00 0.00 0.00 3.69
764 775 5.011738 TCCCTCCGTCCAACAATATAAGATC 59.988 44.000 0.00 0.00 0.00 2.75
765 776 4.905456 TCCCTCCGTCCAACAATATAAGAT 59.095 41.667 0.00 0.00 0.00 2.40
766 777 4.291792 TCCCTCCGTCCAACAATATAAGA 58.708 43.478 0.00 0.00 0.00 2.10
767 778 4.101119 ACTCCCTCCGTCCAACAATATAAG 59.899 45.833 0.00 0.00 0.00 1.73
768 779 4.035112 ACTCCCTCCGTCCAACAATATAA 58.965 43.478 0.00 0.00 0.00 0.98
769 780 3.649843 ACTCCCTCCGTCCAACAATATA 58.350 45.455 0.00 0.00 0.00 0.86
770 781 2.478292 ACTCCCTCCGTCCAACAATAT 58.522 47.619 0.00 0.00 0.00 1.28
771 782 1.946984 ACTCCCTCCGTCCAACAATA 58.053 50.000 0.00 0.00 0.00 1.90
772 783 1.831736 CTACTCCCTCCGTCCAACAAT 59.168 52.381 0.00 0.00 0.00 2.71
773 784 1.263356 CTACTCCCTCCGTCCAACAA 58.737 55.000 0.00 0.00 0.00 2.83
774 785 0.113776 ACTACTCCCTCCGTCCAACA 59.886 55.000 0.00 0.00 0.00 3.33
775 786 2.134789 TACTACTCCCTCCGTCCAAC 57.865 55.000 0.00 0.00 0.00 3.77
776 787 2.905415 TTACTACTCCCTCCGTCCAA 57.095 50.000 0.00 0.00 0.00 3.53
777 788 2.905415 TTTACTACTCCCTCCGTCCA 57.095 50.000 0.00 0.00 0.00 4.02
778 789 6.041296 TCAATATTTTACTACTCCCTCCGTCC 59.959 42.308 0.00 0.00 0.00 4.79
779 790 6.922407 GTCAATATTTTACTACTCCCTCCGTC 59.078 42.308 0.00 0.00 0.00 4.79
780 791 6.183360 GGTCAATATTTTACTACTCCCTCCGT 60.183 42.308 0.00 0.00 0.00 4.69
781 792 6.183360 TGGTCAATATTTTACTACTCCCTCCG 60.183 42.308 0.00 0.00 0.00 4.63
782 793 7.133133 TGGTCAATATTTTACTACTCCCTCC 57.867 40.000 0.00 0.00 0.00 4.30
783 794 9.457436 TTTTGGTCAATATTTTACTACTCCCTC 57.543 33.333 0.00 0.00 0.00 4.30
784 795 9.990868 ATTTTGGTCAATATTTTACTACTCCCT 57.009 29.630 0.00 0.00 0.00 4.20
795 806 8.729756 GGCTTGCTAAAATTTTGGTCAATATTT 58.270 29.630 13.76 6.38 34.82 1.40
796 807 7.882271 TGGCTTGCTAAAATTTTGGTCAATATT 59.118 29.630 13.76 0.00 0.00 1.28
797 808 7.393216 TGGCTTGCTAAAATTTTGGTCAATAT 58.607 30.769 13.76 0.00 0.00 1.28
798 809 6.763355 TGGCTTGCTAAAATTTTGGTCAATA 58.237 32.000 13.76 6.45 0.00 1.90
799 810 5.619220 TGGCTTGCTAAAATTTTGGTCAAT 58.381 33.333 13.76 0.00 0.00 2.57
800 811 5.028549 TGGCTTGCTAAAATTTTGGTCAA 57.971 34.783 13.76 15.69 0.00 3.18
801 812 4.679373 TGGCTTGCTAAAATTTTGGTCA 57.321 36.364 13.76 9.87 0.00 4.02
802 813 6.558771 ATTTGGCTTGCTAAAATTTTGGTC 57.441 33.333 13.76 7.55 0.00 4.02
803 814 8.634335 AATATTTGGCTTGCTAAAATTTTGGT 57.366 26.923 13.76 0.00 0.00 3.67
804 815 9.344309 CAAATATTTGGCTTGCTAAAATTTTGG 57.656 29.630 18.72 11.69 34.59 3.28
821 832 5.945466 AACTTTGCCTTGCCAAATATTTG 57.055 34.783 19.40 19.40 34.50 2.32
822 833 5.643348 GCTAACTTTGCCTTGCCAAATATTT 59.357 36.000 0.00 0.00 34.50 1.40
823 834 5.046376 AGCTAACTTTGCCTTGCCAAATATT 60.046 36.000 0.00 0.00 34.50 1.28
824 835 4.467438 AGCTAACTTTGCCTTGCCAAATAT 59.533 37.500 0.00 0.00 34.50 1.28
825 836 3.831911 AGCTAACTTTGCCTTGCCAAATA 59.168 39.130 0.00 0.00 34.50 1.40
826 837 2.634453 AGCTAACTTTGCCTTGCCAAAT 59.366 40.909 0.00 0.00 34.50 2.32
827 838 2.038659 AGCTAACTTTGCCTTGCCAAA 58.961 42.857 0.00 0.00 33.93 3.28
828 839 1.703411 AGCTAACTTTGCCTTGCCAA 58.297 45.000 0.00 0.00 0.00 4.52
829 840 2.577606 TAGCTAACTTTGCCTTGCCA 57.422 45.000 0.00 0.00 0.00 4.92
830 841 3.934457 TTTAGCTAACTTTGCCTTGCC 57.066 42.857 5.45 0.00 0.00 4.52
831 842 3.987868 GGTTTTAGCTAACTTTGCCTTGC 59.012 43.478 5.45 0.00 0.00 4.01
832 843 5.195001 TGGTTTTAGCTAACTTTGCCTTG 57.805 39.130 5.45 0.00 0.00 3.61
833 844 5.862678 TTGGTTTTAGCTAACTTTGCCTT 57.137 34.783 5.45 0.00 0.00 4.35
834 845 5.538433 TGATTGGTTTTAGCTAACTTTGCCT 59.462 36.000 5.45 0.00 0.00 4.75
835 846 5.633601 GTGATTGGTTTTAGCTAACTTTGCC 59.366 40.000 5.45 5.04 0.00 4.52
836 847 5.342259 CGTGATTGGTTTTAGCTAACTTTGC 59.658 40.000 5.45 0.00 0.00 3.68
837 848 6.577427 GTCGTGATTGGTTTTAGCTAACTTTG 59.423 38.462 5.45 0.00 0.00 2.77
838 849 6.293790 GGTCGTGATTGGTTTTAGCTAACTTT 60.294 38.462 5.45 0.00 0.00 2.66
839 850 5.180680 GGTCGTGATTGGTTTTAGCTAACTT 59.819 40.000 5.45 0.00 0.00 2.66
840 851 4.694037 GGTCGTGATTGGTTTTAGCTAACT 59.306 41.667 5.45 0.00 0.00 2.24
841 852 4.435121 CGGTCGTGATTGGTTTTAGCTAAC 60.435 45.833 5.45 0.00 0.00 2.34
842 853 3.680937 CGGTCGTGATTGGTTTTAGCTAA 59.319 43.478 0.86 0.86 0.00 3.09
843 854 3.056678 TCGGTCGTGATTGGTTTTAGCTA 60.057 43.478 0.00 0.00 0.00 3.32
844 855 2.073816 CGGTCGTGATTGGTTTTAGCT 58.926 47.619 0.00 0.00 0.00 3.32
845 856 2.070783 TCGGTCGTGATTGGTTTTAGC 58.929 47.619 0.00 0.00 0.00 3.09
846 857 3.991773 TCTTCGGTCGTGATTGGTTTTAG 59.008 43.478 0.00 0.00 0.00 1.85
847 858 3.742369 GTCTTCGGTCGTGATTGGTTTTA 59.258 43.478 0.00 0.00 0.00 1.52
848 859 2.546789 GTCTTCGGTCGTGATTGGTTTT 59.453 45.455 0.00 0.00 0.00 2.43
849 860 2.140717 GTCTTCGGTCGTGATTGGTTT 58.859 47.619 0.00 0.00 0.00 3.27
850 861 1.069513 TGTCTTCGGTCGTGATTGGTT 59.930 47.619 0.00 0.00 0.00 3.67
851 862 0.677288 TGTCTTCGGTCGTGATTGGT 59.323 50.000 0.00 0.00 0.00 3.67
852 863 1.927174 GATGTCTTCGGTCGTGATTGG 59.073 52.381 0.00 0.00 0.00 3.16
853 864 1.583856 CGATGTCTTCGGTCGTGATTG 59.416 52.381 0.28 0.00 44.28 2.67
854 865 1.909376 CGATGTCTTCGGTCGTGATT 58.091 50.000 0.28 0.00 44.28 2.57
855 866 3.624305 CGATGTCTTCGGTCGTGAT 57.376 52.632 0.28 0.00 44.28 3.06
864 875 4.563184 ACATCTTAAAGCGTCGATGTCTTC 59.437 41.667 6.48 0.00 41.77 2.87
865 876 4.327357 CACATCTTAAAGCGTCGATGTCTT 59.673 41.667 6.48 7.41 43.16 3.01
866 877 3.859961 CACATCTTAAAGCGTCGATGTCT 59.140 43.478 6.48 1.14 43.16 3.41
867 878 3.612860 ACACATCTTAAAGCGTCGATGTC 59.387 43.478 6.48 0.00 43.16 3.06
868 879 3.367932 CACACATCTTAAAGCGTCGATGT 59.632 43.478 6.48 0.00 45.17 3.06
869 880 3.367932 ACACACATCTTAAAGCGTCGATG 59.632 43.478 0.00 0.00 39.23 3.84
870 881 3.585862 ACACACATCTTAAAGCGTCGAT 58.414 40.909 0.00 0.00 0.00 3.59
871 882 3.021269 ACACACATCTTAAAGCGTCGA 57.979 42.857 0.00 0.00 0.00 4.20
872 883 3.423123 GGAACACACATCTTAAAGCGTCG 60.423 47.826 0.00 0.00 0.00 5.12
873 884 3.496884 TGGAACACACATCTTAAAGCGTC 59.503 43.478 0.00 0.00 0.00 5.19
874 885 3.472652 TGGAACACACATCTTAAAGCGT 58.527 40.909 0.00 0.00 0.00 5.07
890 901 6.016777 ACTGATCAAGAAAACTCATGTGGAAC 60.017 38.462 0.00 0.00 37.35 3.62
891 902 6.064060 ACTGATCAAGAAAACTCATGTGGAA 58.936 36.000 0.00 0.00 0.00 3.53
892 903 5.624159 ACTGATCAAGAAAACTCATGTGGA 58.376 37.500 0.00 0.00 0.00 4.02
893 904 5.954296 ACTGATCAAGAAAACTCATGTGG 57.046 39.130 0.00 0.00 0.00 4.17
894 905 8.777413 TCTTTACTGATCAAGAAAACTCATGTG 58.223 33.333 0.00 0.00 0.00 3.21
895 906 8.908786 TCTTTACTGATCAAGAAAACTCATGT 57.091 30.769 0.00 0.00 0.00 3.21
896 907 7.961827 GCTCTTTACTGATCAAGAAAACTCATG 59.038 37.037 0.00 0.00 0.00 3.07
897 908 7.120432 GGCTCTTTACTGATCAAGAAAACTCAT 59.880 37.037 0.00 0.00 0.00 2.90
898 909 6.428159 GGCTCTTTACTGATCAAGAAAACTCA 59.572 38.462 0.00 0.00 0.00 3.41
899 910 6.428159 TGGCTCTTTACTGATCAAGAAAACTC 59.572 38.462 0.00 0.00 0.00 3.01
900 911 6.205658 GTGGCTCTTTACTGATCAAGAAAACT 59.794 38.462 0.00 0.00 0.00 2.66
901 912 6.374578 GTGGCTCTTTACTGATCAAGAAAAC 58.625 40.000 0.00 0.00 0.00 2.43
902 913 5.179368 CGTGGCTCTTTACTGATCAAGAAAA 59.821 40.000 0.00 0.00 0.00 2.29
903 914 4.690748 CGTGGCTCTTTACTGATCAAGAAA 59.309 41.667 0.00 0.00 0.00 2.52
904 915 4.021456 TCGTGGCTCTTTACTGATCAAGAA 60.021 41.667 0.00 0.00 0.00 2.52
905 916 3.509967 TCGTGGCTCTTTACTGATCAAGA 59.490 43.478 0.00 0.00 0.00 3.02
906 917 3.614616 GTCGTGGCTCTTTACTGATCAAG 59.385 47.826 0.00 0.00 0.00 3.02
907 918 3.258372 AGTCGTGGCTCTTTACTGATCAA 59.742 43.478 0.00 0.00 0.00 2.57
908 919 2.826128 AGTCGTGGCTCTTTACTGATCA 59.174 45.455 0.00 0.00 0.00 2.92
940 951 6.593382 CCTTTGAATTCAGTTTTGTGTGGAAA 59.407 34.615 8.41 0.00 0.00 3.13
973 1012 4.512484 GATTGGAGCTAGCTTCTGAAGTT 58.488 43.478 23.62 14.77 0.00 2.66
977 1016 2.697751 GAGGATTGGAGCTAGCTTCTGA 59.302 50.000 23.62 12.73 0.00 3.27
1029 1071 0.244450 TGGTATCGTCGAACGCCTTT 59.756 50.000 0.00 0.00 42.21 3.11
1044 1086 2.529643 TTGACCCCGGCCTTGGTA 60.530 61.111 12.62 0.00 34.20 3.25
1097 1139 2.434185 GCGCGTGGTGGAAGATGA 60.434 61.111 8.43 0.00 0.00 2.92
1251 1311 2.249844 GGTTCACGACCTGGAAGAAA 57.750 50.000 0.00 0.00 45.55 2.52
1786 1954 3.041940 CGACGTTCACCACCAGGC 61.042 66.667 0.00 0.00 39.06 4.85
2074 2260 4.162690 GCCCTGTAGTGCCGGGAG 62.163 72.222 12.01 0.00 40.55 4.30
2080 2266 2.044946 CCCTTGGCCCTGTAGTGC 60.045 66.667 0.00 0.00 0.00 4.40
2081 2267 2.044946 GCCCTTGGCCCTGTAGTG 60.045 66.667 0.00 0.00 44.06 2.74
2091 2277 1.550130 TACTCCGTTGAGGCCCTTGG 61.550 60.000 0.00 0.00 43.29 3.61
2092 2278 0.541863 ATACTCCGTTGAGGCCCTTG 59.458 55.000 0.00 0.00 43.29 3.61
2093 2279 1.286248 AATACTCCGTTGAGGCCCTT 58.714 50.000 0.00 0.00 43.29 3.95
2094 2280 1.065418 CAAATACTCCGTTGAGGCCCT 60.065 52.381 0.00 0.00 43.29 5.19
2095 2281 1.339727 ACAAATACTCCGTTGAGGCCC 60.340 52.381 0.00 0.00 43.29 5.80
2096 2282 2.007608 GACAAATACTCCGTTGAGGCC 58.992 52.381 0.00 0.00 43.29 5.19
2097 2283 1.659098 CGACAAATACTCCGTTGAGGC 59.341 52.381 0.00 0.00 43.29 4.70
2098 2284 2.666508 CACGACAAATACTCCGTTGAGG 59.333 50.000 0.00 0.00 43.29 3.86
2099 2285 2.092211 GCACGACAAATACTCCGTTGAG 59.908 50.000 0.00 0.00 44.62 3.02
2100 2286 2.063266 GCACGACAAATACTCCGTTGA 58.937 47.619 0.00 0.00 32.50 3.18
2101 2287 2.066262 AGCACGACAAATACTCCGTTG 58.934 47.619 0.00 0.00 32.50 4.10
2102 2288 2.450609 AGCACGACAAATACTCCGTT 57.549 45.000 0.00 0.00 32.50 4.44
2103 2289 2.450609 AAGCACGACAAATACTCCGT 57.549 45.000 0.00 0.00 35.46 4.69
2104 2290 4.109766 TCATAAGCACGACAAATACTCCG 58.890 43.478 0.00 0.00 0.00 4.63
2105 2291 5.107837 CGATCATAAGCACGACAAATACTCC 60.108 44.000 0.00 0.00 0.00 3.85
2106 2292 5.107837 CCGATCATAAGCACGACAAATACTC 60.108 44.000 0.00 0.00 0.00 2.59
2107 2293 4.745125 CCGATCATAAGCACGACAAATACT 59.255 41.667 0.00 0.00 0.00 2.12
2108 2294 4.743151 TCCGATCATAAGCACGACAAATAC 59.257 41.667 0.00 0.00 0.00 1.89
2109 2295 4.743151 GTCCGATCATAAGCACGACAAATA 59.257 41.667 0.00 0.00 0.00 1.40
2110 2296 3.555956 GTCCGATCATAAGCACGACAAAT 59.444 43.478 0.00 0.00 0.00 2.32
2127 2313 1.377202 GCCCAAGCATGAAGTCCGA 60.377 57.895 0.00 0.00 39.53 4.55
2135 2321 3.635373 ACTATGATTCAAGCCCAAGCATG 59.365 43.478 0.00 0.00 43.56 4.06
2136 2322 3.907221 ACTATGATTCAAGCCCAAGCAT 58.093 40.909 0.00 0.00 43.56 3.79
2139 2325 7.446319 TCATTCATACTATGATTCAAGCCCAAG 59.554 37.037 0.00 0.00 39.39 3.61
2155 2341 8.380867 TGGATAATCAGAGCATTCATTCATACT 58.619 33.333 0.00 0.00 0.00 2.12
2230 2416 8.260818 TCAATCTTATTTGGAAAAACAACACCA 58.739 29.630 0.00 0.00 0.00 4.17
2289 2475 6.684686 ACAAACGCACTGTCTATTTCTAGTA 58.315 36.000 0.00 0.00 0.00 1.82
2459 2652 4.679412 GGCCTGTTCGGACGTTTA 57.321 55.556 0.00 0.00 33.16 2.01
2527 2720 2.227757 TCCGGATGTTTGAGGCCCA 61.228 57.895 0.00 0.00 0.00 5.36
2584 2777 4.394712 CGGGGCCGCTCCATATCC 62.395 72.222 18.79 0.00 36.21 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.