Multiple sequence alignment - TraesCS3D01G414100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G414100 chr3D 100.000 3311 0 0 1 3311 526070883 526067573 0.000000e+00 6115.0
1 TraesCS3D01G414100 chr3D 86.667 285 36 2 19 302 383591926 383591643 6.900000e-82 315.0
2 TraesCS3D01G414100 chr3D 80.503 318 39 10 2882 3197 427303529 427303825 4.300000e-54 222.0
3 TraesCS3D01G414100 chr3D 80.000 325 36 16 2882 3192 29797830 29798139 2.590000e-51 213.0
4 TraesCS3D01G414100 chr3D 80.247 324 28 19 2883 3196 536210543 536210246 9.310000e-51 211.0
5 TraesCS3D01G414100 chr3D 90.647 139 13 0 1981 2119 526068969 526068831 5.640000e-43 185.0
6 TraesCS3D01G414100 chr3D 81.034 232 36 4 1324 1554 526069458 526069234 9.440000e-41 178.0
7 TraesCS3D01G414100 chr3D 77.922 308 45 17 2941 3245 597484227 597484514 1.580000e-38 171.0
8 TraesCS3D01G414100 chr3D 81.564 179 25 8 2863 3037 542830267 542830441 1.240000e-29 141.0
9 TraesCS3D01G414100 chr3D 89.000 100 11 0 2598 2697 275206411 275206312 1.250000e-24 124.0
10 TraesCS3D01G414100 chr2D 93.525 2579 147 9 23 2595 569260903 569263467 0.000000e+00 3819.0
11 TraesCS3D01G414100 chr2D 87.889 289 27 7 23 304 507459805 507459518 1.900000e-87 333.0
12 TraesCS3D01G414100 chr2D 78.630 365 46 15 2883 3245 8220480 8220814 2.590000e-51 213.0
13 TraesCS3D01G414100 chr2D 91.096 146 11 2 1974 2119 569262786 569262929 2.610000e-46 196.0
14 TraesCS3D01G414100 chr2D 82.096 229 35 2 1326 1554 569262304 569262526 1.210000e-44 191.0
15 TraesCS3D01G414100 chr2D 78.808 302 44 15 2902 3199 622307630 622307345 5.640000e-43 185.0
16 TraesCS3D01G414100 chr5D 90.625 1664 110 19 28 1647 445208497 445210158 0.000000e+00 2167.0
17 TraesCS3D01G414100 chr5D 84.398 1205 117 26 299 1448 489152525 489153713 0.000000e+00 1118.0
18 TraesCS3D01G414100 chr5D 84.943 1056 118 25 302 1336 431531471 431530436 0.000000e+00 1031.0
19 TraesCS3D01G414100 chr5D 89.810 736 60 4 1324 2053 445210033 445210759 0.000000e+00 929.0
20 TraesCS3D01G414100 chr5D 95.309 405 12 1 2198 2595 445210768 445211172 1.300000e-178 636.0
21 TraesCS3D01G414100 chr5D 87.188 320 41 0 1670 1989 431530355 431530036 6.750000e-97 364.0
22 TraesCS3D01G414100 chr5D 88.693 283 25 5 302 578 431531901 431531620 4.090000e-89 339.0
23 TraesCS3D01G414100 chr5D 86.774 310 32 8 302 603 445207945 445208253 1.470000e-88 337.0
24 TraesCS3D01G414100 chr5D 88.645 273 28 3 28 298 421880776 421880505 2.460000e-86 329.0
25 TraesCS3D01G414100 chr5D 82.768 354 42 11 2047 2391 489153980 489154323 6.950000e-77 298.0
26 TraesCS3D01G414100 chr5D 87.402 254 25 3 329 576 489152116 489152368 5.410000e-73 285.0
27 TraesCS3D01G414100 chr5D 78.355 462 74 7 1524 1984 445215026 445215462 3.250000e-70 276.0
28 TraesCS3D01G414100 chr5D 80.782 307 30 16 2941 3245 528752094 528751815 2.590000e-51 213.0
29 TraesCS3D01G414100 chr5D 78.743 334 47 16 2045 2376 431538994 431538683 5.600000e-48 202.0
30 TraesCS3D01G414100 chr5D 83.412 211 25 6 2052 2255 431530105 431529898 1.570000e-43 187.0
31 TraesCS3D01G414100 chr5D 87.578 161 16 2 2439 2595 431404443 431404283 2.030000e-42 183.0
32 TraesCS3D01G414100 chr5D 81.659 229 29 6 2971 3195 28996401 28996182 9.440000e-41 178.0
33 TraesCS3D01G414100 chr5D 88.372 129 15 0 1324 1452 445210237 445210365 4.420000e-34 156.0
34 TraesCS3D01G414100 chr5D 87.324 71 9 0 1257 1327 445209942 445210012 7.620000e-12 82.4
35 TraesCS3D01G414100 chr5A 88.429 1642 130 15 23 1612 562785244 562786877 0.000000e+00 1925.0
36 TraesCS3D01G414100 chr5A 84.796 1105 90 21 1338 2429 562787134 562788173 0.000000e+00 1038.0
37 TraesCS3D01G414100 chr5A 89.550 622 39 9 1981 2595 546589174 546588572 0.000000e+00 765.0
38 TraesCS3D01G414100 chr5A 83.002 806 86 22 1257 2052 546589801 546589037 0.000000e+00 682.0
39 TraesCS3D01G414100 chr5A 87.805 410 35 6 928 1336 546590221 546589826 1.800000e-127 466.0
40 TraesCS3D01G414100 chr5A 80.851 470 72 14 1524 1985 562797388 562797847 1.460000e-93 353.0
41 TraesCS3D01G414100 chr5A 88.809 277 27 4 23 298 520245502 520245775 1.470000e-88 337.0
42 TraesCS3D01G414100 chr5A 77.017 657 103 22 926 1554 546659100 546658464 1.900000e-87 333.0
43 TraesCS3D01G414100 chr5A 87.912 273 30 3 335 606 546591430 546591160 5.330000e-83 318.0
44 TraesCS3D01G414100 chr5A 85.000 220 27 4 1437 1650 562786498 562786717 5.560000e-53 219.0
45 TraesCS3D01G414100 chr5A 80.442 317 29 13 2882 3195 535278121 535278407 9.310000e-51 211.0
46 TraesCS3D01G414100 chr5A 78.229 271 44 12 2933 3195 523630378 523630115 3.420000e-35 159.0
47 TraesCS3D01G414100 chr5A 88.281 128 13 2 1910 2035 562787723 562787850 5.720000e-33 152.0
48 TraesCS3D01G414100 chr5A 93.137 102 7 0 2598 2699 649787920 649787819 2.060000e-32 150.0
49 TraesCS3D01G414100 chr5A 79.000 200 36 6 2047 2243 546658196 546658000 7.460000e-27 132.0
50 TraesCS3D01G414100 chr5A 90.099 101 10 0 2598 2698 649792149 649792049 7.460000e-27 132.0
51 TraesCS3D01G414100 chr7D 83.066 561 67 16 2047 2589 28531323 28531873 4.970000e-133 484.0
52 TraesCS3D01G414100 chr1D 82.005 439 73 1 1524 1956 10393464 10393026 5.220000e-98 368.0
53 TraesCS3D01G414100 chr1D 78.715 498 63 25 2107 2590 10393028 10392560 3.230000e-75 292.0
54 TraesCS3D01G414100 chr1D 82.700 237 27 8 2961 3195 441735750 441735974 7.250000e-47 198.0
55 TraesCS3D01G414100 chr4D 88.214 280 30 2 21 298 378497134 378496856 6.850000e-87 331.0
56 TraesCS3D01G414100 chr4D 87.544 281 34 1 19 298 278254031 278254311 1.150000e-84 324.0
57 TraesCS3D01G414100 chr4D 87.273 110 13 1 2598 2707 312865352 312865244 1.250000e-24 124.0
58 TraesCS3D01G414100 chr2A 83.284 341 33 14 2877 3213 753764819 753765139 3.230000e-75 292.0
59 TraesCS3D01G414100 chr6A 78.779 344 37 17 2882 3221 599797368 599797679 7.250000e-47 198.0
60 TraesCS3D01G414100 chr6A 76.752 314 43 16 2890 3195 599797735 599797444 7.400000e-32 148.0
61 TraesCS3D01G414100 chr6A 90.196 102 10 0 2598 2699 578705426 578705325 2.070000e-27 134.0
62 TraesCS3D01G414100 chr6A 88.235 102 12 0 2598 2699 586843749 586843850 4.490000e-24 122.0
63 TraesCS3D01G414100 chr6B 78.882 322 36 14 2882 3195 688859544 688859841 4.360000e-44 189.0
64 TraesCS3D01G414100 chr6D 78.019 323 45 14 2883 3199 453470144 453470446 2.630000e-41 180.0
65 TraesCS3D01G414100 chr3A 93.069 101 7 0 2598 2698 473328102 473328202 7.400000e-32 148.0
66 TraesCS3D01G414100 chr3A 88.350 103 12 0 2596 2698 470124490 470124388 1.250000e-24 124.0
67 TraesCS3D01G414100 chr7B 85.385 130 19 0 1119 1248 3721703 3721832 5.760000e-28 135.0
68 TraesCS3D01G414100 chr5B 89.109 101 11 0 2598 2698 14281131 14281031 3.470000e-25 126.0
69 TraesCS3D01G414100 chr7A 83.969 131 19 2 1119 1248 66173988 66174117 1.250000e-24 124.0
70 TraesCS3D01G414100 chr1A 80.000 155 20 11 2891 3040 589435907 589436055 1.630000e-18 104.0
71 TraesCS3D01G414100 chr1A 80.488 123 14 6 2968 3088 52831309 52831423 5.890000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G414100 chr3D 526067573 526070883 3310 True 2159.333333 6115 90.560333 1 3311 3 chr3D.!!$R4 3310
1 TraesCS3D01G414100 chr2D 569260903 569263467 2564 False 1402.000000 3819 88.905667 23 2595 3 chr2D.!!$F2 2572
2 TraesCS3D01G414100 chr5D 445207945 445215462 7517 False 654.771429 2167 88.081286 28 2595 7 chr5D.!!$F1 2567
3 TraesCS3D01G414100 chr5D 489152116 489154323 2207 False 567.000000 1118 84.856000 299 2391 3 chr5D.!!$F2 2092
4 TraesCS3D01G414100 chr5D 431529898 431531901 2003 True 480.250000 1031 86.059000 302 2255 4 chr5D.!!$R6 1953
5 TraesCS3D01G414100 chr5A 562785244 562788173 2929 False 833.500000 1925 86.626500 23 2429 4 chr5A.!!$F4 2406
6 TraesCS3D01G414100 chr5A 546588572 546591430 2858 True 557.750000 765 87.067250 335 2595 4 chr5A.!!$R4 2260
7 TraesCS3D01G414100 chr5A 546658000 546659100 1100 True 232.500000 333 78.008500 926 2243 2 chr5A.!!$R5 1317
8 TraesCS3D01G414100 chr7D 28531323 28531873 550 False 484.000000 484 83.066000 2047 2589 1 chr7D.!!$F1 542
9 TraesCS3D01G414100 chr1D 10392560 10393464 904 True 330.000000 368 80.360000 1524 2590 2 chr1D.!!$R1 1066

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
21 22 0.533032 AGAGGACTCGCTTTAGGTGC 59.467 55.0 0.00 0.0 34.09 5.01 F
823 1718 0.611618 TTGCTTGGCATGGGAATCGT 60.612 50.0 2.33 0.0 38.76 3.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1076 2217 0.935898 GCATCTCTGAAGACATGCGG 59.064 55.0 5.03 0.0 36.88 5.69 R
2596 4989 0.039888 CGTTTTTGGCCGTCGGATTT 60.040 50.0 17.49 0.0 0.00 2.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.217510 TGAGAGGACTCGCTTTAGGT 57.782 50.000 4.76 0.00 45.25 3.08
20 21 1.819288 TGAGAGGACTCGCTTTAGGTG 59.181 52.381 4.76 0.00 45.25 4.00
21 22 0.533032 AGAGGACTCGCTTTAGGTGC 59.467 55.000 0.00 0.00 34.09 5.01
30 31 1.590147 CTTTAGGTGCGAGGTCCGT 59.410 57.895 0.00 0.00 41.15 4.69
134 136 6.007076 TCATGTACTGTTTTGGCCTGATTTA 58.993 36.000 3.32 0.00 0.00 1.40
174 176 5.016051 TGCTCAGATATCCAAGTGACTTC 57.984 43.478 0.00 0.00 0.00 3.01
189 191 1.886542 GACTTCAAATTTGGAGCGGGT 59.113 47.619 23.90 7.53 37.29 5.28
191 193 2.162681 CTTCAAATTTGGAGCGGGTCT 58.837 47.619 17.90 0.00 0.00 3.85
195 197 0.673644 AATTTGGAGCGGGTCTCACG 60.674 55.000 7.19 0.00 43.70 4.35
210 212 4.572389 GGTCTCACGCATCAAATTGTCTAT 59.428 41.667 0.00 0.00 0.00 1.98
277 281 4.031129 CCAGGTGCAGCTGAGCCT 62.031 66.667 40.03 20.02 0.00 4.58
298 302 2.572209 GGCACCAAAACACCCTACTA 57.428 50.000 0.00 0.00 0.00 1.82
299 303 2.156917 GGCACCAAAACACCCTACTAC 58.843 52.381 0.00 0.00 0.00 2.73
300 304 2.487625 GGCACCAAAACACCCTACTACA 60.488 50.000 0.00 0.00 0.00 2.74
301 305 3.215975 GCACCAAAACACCCTACTACAA 58.784 45.455 0.00 0.00 0.00 2.41
302 306 3.633065 GCACCAAAACACCCTACTACAAA 59.367 43.478 0.00 0.00 0.00 2.83
303 307 4.098196 GCACCAAAACACCCTACTACAAAA 59.902 41.667 0.00 0.00 0.00 2.44
304 308 5.221362 GCACCAAAACACCCTACTACAAAAT 60.221 40.000 0.00 0.00 0.00 1.82
305 309 6.684362 GCACCAAAACACCCTACTACAAAATT 60.684 38.462 0.00 0.00 0.00 1.82
306 310 7.269316 CACCAAAACACCCTACTACAAAATTT 58.731 34.615 0.00 0.00 0.00 1.82
307 311 7.766738 CACCAAAACACCCTACTACAAAATTTT 59.233 33.333 0.00 0.00 0.00 1.82
308 312 7.982919 ACCAAAACACCCTACTACAAAATTTTC 59.017 33.333 0.00 0.00 0.00 2.29
512 1372 9.426534 TTTTGTTGGATTTAATTTTTCCCCAAT 57.573 25.926 0.00 0.00 35.09 3.16
529 1389 1.779061 AATGGAGCCCGACAAGGTGT 61.779 55.000 0.00 0.00 38.74 4.16
662 1546 7.676683 ATAGTAGAAAGTTAGGCATCTCCAA 57.323 36.000 0.00 0.00 37.29 3.53
669 1553 0.975556 TAGGCATCTCCAACTGGCGA 60.976 55.000 0.00 0.00 42.32 5.54
681 1569 1.071471 CTGGCGACTCACCCTTGTT 59.929 57.895 0.00 0.00 0.00 2.83
719 1609 1.951602 ACCACTTGCGTTAAGGGAAAC 59.048 47.619 3.69 0.00 42.70 2.78
757 1647 4.985538 TCTTTTTCAGTTGAGTATGGCCT 58.014 39.130 3.32 0.00 0.00 5.19
823 1718 0.611618 TTGCTTGGCATGGGAATCGT 60.612 50.000 2.33 0.00 38.76 3.73
952 2061 2.766828 CCTCCCGTCCTCTTCAAATACT 59.233 50.000 0.00 0.00 0.00 2.12
1088 2229 4.393155 AGCCGCCGCATGTCTTCA 62.393 61.111 0.00 0.00 37.52 3.02
1109 2250 4.334118 ATGCAGTCCACTGGCGCA 62.334 61.111 10.83 8.55 43.94 6.09
1186 2327 1.094073 GCAGCATTCTCCTGTGCGAT 61.094 55.000 0.00 0.00 45.69 4.58
1193 2334 2.358615 TCCTGTGCGATGTGCCAC 60.359 61.111 0.00 0.00 45.60 5.01
1443 3016 2.832661 GTGTGCCACTGCCCAACA 60.833 61.111 0.00 0.00 36.33 3.33
1464 3037 1.005867 GTCCGCACGGAGGTTACAA 60.006 57.895 12.96 0.00 46.16 2.41
1481 3054 3.788227 ACAACCAGAGCAATGGAACTA 57.212 42.857 13.66 0.00 43.57 2.24
1484 3057 3.902881 ACCAGAGCAATGGAACTAGAG 57.097 47.619 13.66 0.00 43.57 2.43
1571 3567 1.741770 CACGGAGGTTACAGCCAGC 60.742 63.158 0.00 0.00 0.00 4.85
1762 4060 2.183300 CCGATTGGAGTTCGCCGA 59.817 61.111 0.00 0.00 37.49 5.54
1881 4188 4.134785 TGGCAACCTGGGCACACA 62.135 61.111 0.00 0.00 38.55 3.72
1977 4335 1.376942 GAGGAGGACTCGGTCGACA 60.377 63.158 18.91 0.00 36.29 4.35
2036 4394 2.225496 ACTGGATGTTGAGGAGGACTCT 60.225 50.000 0.00 0.00 46.72 3.24
2074 4432 1.589196 GAGCGCGCGAAGTAAGGAT 60.589 57.895 37.18 3.04 0.00 3.24
2101 4459 1.075050 ACTGGACGTTGAGGAGGACTA 59.925 52.381 0.00 0.00 0.00 2.59
2160 4518 5.411669 CCACAGGAGCTTTACTTATTCGTTT 59.588 40.000 0.00 0.00 0.00 3.60
2161 4519 6.592607 CCACAGGAGCTTTACTTATTCGTTTA 59.407 38.462 0.00 0.00 0.00 2.01
2162 4520 7.201530 CCACAGGAGCTTTACTTATTCGTTTAG 60.202 40.741 0.00 0.00 0.00 1.85
2202 4571 6.416750 TTGATCTACTCATATACGTTGCAACG 59.583 38.462 41.62 41.62 45.01 4.10
2255 4625 2.228822 GCAAGTTTCGACATCCACCAAT 59.771 45.455 0.00 0.00 0.00 3.16
2278 4658 1.561717 CGTCATCACCAAAACGCCGA 61.562 55.000 0.00 0.00 0.00 5.54
2290 4670 4.717629 CGCCGACACAAGCTCCGA 62.718 66.667 0.00 0.00 0.00 4.55
2458 4851 3.439129 CCTTTAACAAGGTCCGATTGGTC 59.561 47.826 0.00 0.00 44.46 4.02
2496 4889 3.663078 CGCGTACGATATTAGCGGA 57.337 52.632 21.65 0.00 46.06 5.54
2538 4931 6.932960 TGATTTATGATCCACATCAGCTAGTG 59.067 38.462 6.24 6.24 42.53 2.74
2595 4988 1.197721 CATCCTTGCAAGACGGTTGTC 59.802 52.381 28.05 0.00 45.86 3.18
2605 4998 0.437295 GACGGTTGTCAAATCCGACG 59.563 55.000 18.55 5.80 46.05 5.12
2606 4999 0.947180 ACGGTTGTCAAATCCGACGG 60.947 55.000 18.55 7.84 46.05 4.79
2607 5000 1.500396 GGTTGTCAAATCCGACGGC 59.500 57.895 9.66 0.00 38.84 5.68
2608 5001 1.500396 GTTGTCAAATCCGACGGCC 59.500 57.895 9.66 0.00 38.84 6.13
2609 5002 1.071642 TTGTCAAATCCGACGGCCA 59.928 52.632 9.66 0.00 38.84 5.36
2610 5003 0.535328 TTGTCAAATCCGACGGCCAA 60.535 50.000 9.66 2.25 38.84 4.52
2611 5004 0.535328 TGTCAAATCCGACGGCCAAA 60.535 50.000 9.66 0.00 38.84 3.28
2612 5005 0.594110 GTCAAATCCGACGGCCAAAA 59.406 50.000 9.66 0.00 0.00 2.44
2613 5006 1.001158 GTCAAATCCGACGGCCAAAAA 60.001 47.619 9.66 0.00 0.00 1.94
2614 5007 1.001158 TCAAATCCGACGGCCAAAAAC 60.001 47.619 9.66 0.00 0.00 2.43
2615 5008 0.039888 AAATCCGACGGCCAAAAACG 60.040 50.000 9.66 0.00 0.00 3.60
2616 5009 0.885596 AATCCGACGGCCAAAAACGA 60.886 50.000 9.66 0.00 0.00 3.85
2617 5010 1.571215 ATCCGACGGCCAAAAACGAC 61.571 55.000 9.66 0.00 0.00 4.34
2618 5011 2.248835 CCGACGGCCAAAAACGACT 61.249 57.895 2.24 0.00 0.00 4.18
2619 5012 0.945265 CCGACGGCCAAAAACGACTA 60.945 55.000 2.24 0.00 0.00 2.59
2621 5014 1.261089 CGACGGCCAAAAACGACTAAA 59.739 47.619 2.24 0.00 0.00 1.85
2623 5016 3.294102 GACGGCCAAAAACGACTAAAAG 58.706 45.455 2.24 0.00 0.00 2.27
2624 5017 2.684374 ACGGCCAAAAACGACTAAAAGT 59.316 40.909 2.24 0.00 0.00 2.66
2625 5018 3.040099 CGGCCAAAAACGACTAAAAGTG 58.960 45.455 2.24 0.00 0.00 3.16
2626 5019 3.377439 GGCCAAAAACGACTAAAAGTGG 58.623 45.455 0.00 0.00 0.00 4.00
2627 5020 2.792674 GCCAAAAACGACTAAAAGTGGC 59.207 45.455 0.00 0.00 43.10 5.01
2628 5021 3.040099 CCAAAAACGACTAAAAGTGGCG 58.960 45.455 0.00 0.00 0.00 5.69
2629 5022 3.242804 CCAAAAACGACTAAAAGTGGCGA 60.243 43.478 0.00 0.00 0.00 5.54
2630 5023 4.533222 CAAAAACGACTAAAAGTGGCGAT 58.467 39.130 0.00 0.00 0.00 4.58
2631 5024 4.400036 AAAACGACTAAAAGTGGCGATC 57.600 40.909 0.00 0.00 0.00 3.69
2632 5025 2.005971 ACGACTAAAAGTGGCGATCC 57.994 50.000 0.00 0.00 0.00 3.36
2633 5026 1.274167 ACGACTAAAAGTGGCGATCCA 59.726 47.619 0.00 0.00 40.85 3.41
2634 5027 2.289195 ACGACTAAAAGTGGCGATCCAA 60.289 45.455 0.00 0.00 45.53 3.53
2635 5028 2.093783 CGACTAAAAGTGGCGATCCAAC 59.906 50.000 0.00 0.00 45.53 3.77
2636 5029 3.071479 GACTAAAAGTGGCGATCCAACA 58.929 45.455 0.00 0.00 45.53 3.33
2637 5030 3.482436 ACTAAAAGTGGCGATCCAACAA 58.518 40.909 0.00 0.00 45.53 2.83
2638 5031 4.079253 ACTAAAAGTGGCGATCCAACAAT 58.921 39.130 0.00 0.00 45.53 2.71
2640 5033 5.708230 ACTAAAAGTGGCGATCCAACAATTA 59.292 36.000 0.00 0.00 45.53 1.40
2641 5034 5.461032 AAAAGTGGCGATCCAACAATTAA 57.539 34.783 0.00 0.00 45.53 1.40
2642 5035 5.461032 AAAGTGGCGATCCAACAATTAAA 57.539 34.783 0.00 0.00 45.53 1.52
2643 5036 5.461032 AAGTGGCGATCCAACAATTAAAA 57.539 34.783 0.00 0.00 45.53 1.52
2644 5037 5.461032 AGTGGCGATCCAACAATTAAAAA 57.539 34.783 0.00 0.00 45.53 1.94
2645 5038 6.036577 AGTGGCGATCCAACAATTAAAAAT 57.963 33.333 0.00 0.00 45.53 1.82
2647 5040 4.629200 TGGCGATCCAACAATTAAAAATGC 59.371 37.500 0.00 0.00 39.99 3.56
2648 5041 4.869861 GGCGATCCAACAATTAAAAATGCT 59.130 37.500 0.00 0.00 0.00 3.79
2650 5043 5.576384 GCGATCCAACAATTAAAAATGCTGA 59.424 36.000 0.00 0.00 0.00 4.26
2652 5045 7.614908 CGATCCAACAATTAAAAATGCTGATG 58.385 34.615 0.00 0.00 0.00 3.07
2653 5046 7.254185 CGATCCAACAATTAAAAATGCTGATGG 60.254 37.037 0.00 0.00 0.00 3.51
2654 5047 5.642919 TCCAACAATTAAAAATGCTGATGGC 59.357 36.000 0.00 0.00 42.22 4.40
2655 5048 5.163733 CCAACAATTAAAAATGCTGATGGCC 60.164 40.000 0.00 0.00 40.92 5.36
2657 5050 6.543430 ACAATTAAAAATGCTGATGGCCTA 57.457 33.333 3.32 0.00 40.92 3.93
2661 5054 4.996788 AAAAATGCTGATGGCCTAAGAG 57.003 40.909 3.32 0.00 40.92 2.85
2663 5056 3.488778 AATGCTGATGGCCTAAGAGAG 57.511 47.619 3.32 0.00 40.92 3.20
2665 5058 2.191400 TGCTGATGGCCTAAGAGAGTT 58.809 47.619 3.32 0.00 40.92 3.01
2666 5059 2.093288 TGCTGATGGCCTAAGAGAGTTG 60.093 50.000 3.32 0.00 40.92 3.16
2669 5062 2.119495 GATGGCCTAAGAGAGTTGGGA 58.881 52.381 3.32 0.00 0.00 4.37
2670 5063 1.573108 TGGCCTAAGAGAGTTGGGAG 58.427 55.000 3.32 0.00 0.00 4.30
2671 5064 0.833949 GGCCTAAGAGAGTTGGGAGG 59.166 60.000 0.00 0.00 0.00 4.30
2672 5065 1.622725 GGCCTAAGAGAGTTGGGAGGA 60.623 57.143 0.00 0.00 0.00 3.71
2673 5066 2.403561 GCCTAAGAGAGTTGGGAGGAT 58.596 52.381 0.00 0.00 0.00 3.24
2675 5068 2.103941 CCTAAGAGAGTTGGGAGGATGC 59.896 54.545 0.00 0.00 0.00 3.91
2676 5069 1.963985 AAGAGAGTTGGGAGGATGCT 58.036 50.000 0.00 0.00 0.00 3.79
2677 5070 1.494960 AGAGAGTTGGGAGGATGCTC 58.505 55.000 5.52 5.52 0.00 4.26
2678 5071 0.103937 GAGAGTTGGGAGGATGCTCG 59.896 60.000 8.26 0.00 0.00 5.03
2679 5072 1.144936 GAGTTGGGAGGATGCTCGG 59.855 63.158 8.26 0.00 0.00 4.63
2680 5073 1.613630 AGTTGGGAGGATGCTCGGT 60.614 57.895 8.26 0.00 0.00 4.69
2681 5074 1.201429 AGTTGGGAGGATGCTCGGTT 61.201 55.000 8.26 0.00 0.00 4.44
2683 5076 1.141053 GTTGGGAGGATGCTCGGTTAT 59.859 52.381 8.26 0.00 0.00 1.89
2685 5078 2.684943 TGGGAGGATGCTCGGTTATAA 58.315 47.619 8.26 0.00 0.00 0.98
2686 5079 3.248024 TGGGAGGATGCTCGGTTATAAT 58.752 45.455 8.26 0.00 0.00 1.28
2687 5080 3.007940 TGGGAGGATGCTCGGTTATAATG 59.992 47.826 8.26 0.00 0.00 1.90
2688 5081 3.008049 GGGAGGATGCTCGGTTATAATGT 59.992 47.826 8.26 0.00 0.00 2.71
2689 5082 4.222145 GGGAGGATGCTCGGTTATAATGTA 59.778 45.833 8.26 0.00 0.00 2.29
2690 5083 5.104900 GGGAGGATGCTCGGTTATAATGTAT 60.105 44.000 8.26 0.00 0.00 2.29
2691 5084 6.043411 GGAGGATGCTCGGTTATAATGTATC 58.957 44.000 8.26 0.00 0.00 2.24
2692 5085 6.127310 GGAGGATGCTCGGTTATAATGTATCT 60.127 42.308 8.26 0.00 0.00 1.98
2722 6417 5.717078 AAGCATGCTTCATAACCCATATG 57.283 39.130 27.21 0.00 42.40 1.78
2723 6418 4.084287 AGCATGCTTCATAACCCATATGG 58.916 43.478 16.30 15.41 41.53 2.74
2752 6447 8.476657 TCGTCCATATAACGAATACTCTAGAG 57.523 38.462 18.49 18.49 45.36 2.43
2754 6449 8.719648 CGTCCATATAACGAATACTCTAGAGTT 58.280 37.037 29.57 13.75 42.62 3.01
2755 6450 9.828852 GTCCATATAACGAATACTCTAGAGTTG 57.171 37.037 29.57 18.58 42.54 3.16
2756 6451 9.570468 TCCATATAACGAATACTCTAGAGTTGT 57.430 33.333 29.57 19.16 42.54 3.32
2757 6452 9.828852 CCATATAACGAATACTCTAGAGTTGTC 57.171 37.037 29.57 23.20 42.54 3.18
2758 6453 9.828852 CATATAACGAATACTCTAGAGTTGTCC 57.171 37.037 29.57 15.25 42.54 4.02
2759 6454 9.796180 ATATAACGAATACTCTAGAGTTGTCCT 57.204 33.333 29.57 16.51 42.54 3.85
2761 6456 7.934855 AACGAATACTCTAGAGTTGTCCTTA 57.065 36.000 29.57 11.06 42.54 2.69
2762 6457 7.556733 ACGAATACTCTAGAGTTGTCCTTAG 57.443 40.000 29.57 16.52 42.54 2.18
2763 6458 6.543100 ACGAATACTCTAGAGTTGTCCTTAGG 59.457 42.308 29.57 15.15 42.54 2.69
2764 6459 6.543100 CGAATACTCTAGAGTTGTCCTTAGGT 59.457 42.308 29.57 4.48 42.54 3.08
2765 6460 7.467539 CGAATACTCTAGAGTTGTCCTTAGGTG 60.468 44.444 29.57 9.47 42.54 4.00
2766 6461 5.000570 ACTCTAGAGTTGTCCTTAGGTGT 57.999 43.478 20.00 0.00 38.83 4.16
2768 6463 5.222171 ACTCTAGAGTTGTCCTTAGGTGTCT 60.222 44.000 20.00 0.00 38.83 3.41
2769 6464 5.010933 TCTAGAGTTGTCCTTAGGTGTCTG 58.989 45.833 0.00 0.00 0.00 3.51
2770 6465 3.577919 AGAGTTGTCCTTAGGTGTCTGT 58.422 45.455 0.00 0.00 0.00 3.41
2771 6466 4.737578 AGAGTTGTCCTTAGGTGTCTGTA 58.262 43.478 0.00 0.00 0.00 2.74
2772 6467 4.767928 AGAGTTGTCCTTAGGTGTCTGTAG 59.232 45.833 0.00 0.00 0.00 2.74
2773 6468 4.481072 AGTTGTCCTTAGGTGTCTGTAGT 58.519 43.478 0.00 0.00 0.00 2.73
2776 6471 4.989277 TGTCCTTAGGTGTCTGTAGTGTA 58.011 43.478 0.00 0.00 0.00 2.90
2777 6472 4.763793 TGTCCTTAGGTGTCTGTAGTGTAC 59.236 45.833 0.00 0.00 0.00 2.90
2779 6474 4.043812 TCCTTAGGTGTCTGTAGTGTACCT 59.956 45.833 0.00 0.00 43.69 3.08
2780 6475 4.771054 CCTTAGGTGTCTGTAGTGTACCTT 59.229 45.833 0.00 0.00 41.67 3.50
2781 6476 5.245526 CCTTAGGTGTCTGTAGTGTACCTTT 59.754 44.000 0.00 0.00 41.67 3.11
2782 6477 6.239515 CCTTAGGTGTCTGTAGTGTACCTTTT 60.240 42.308 0.00 0.00 41.67 2.27
2783 6478 7.039504 CCTTAGGTGTCTGTAGTGTACCTTTTA 60.040 40.741 0.00 0.00 41.67 1.52
2784 6479 6.930068 AGGTGTCTGTAGTGTACCTTTTAT 57.070 37.500 0.00 0.00 38.56 1.40
2785 6480 6.932947 AGGTGTCTGTAGTGTACCTTTTATC 58.067 40.000 0.00 0.00 38.56 1.75
2786 6481 6.724905 AGGTGTCTGTAGTGTACCTTTTATCT 59.275 38.462 0.00 0.00 38.56 1.98
2787 6482 7.234988 AGGTGTCTGTAGTGTACCTTTTATCTT 59.765 37.037 0.00 0.00 38.56 2.40
2788 6483 7.544915 GGTGTCTGTAGTGTACCTTTTATCTTC 59.455 40.741 0.00 0.00 0.00 2.87
2789 6484 8.305317 GTGTCTGTAGTGTACCTTTTATCTTCT 58.695 37.037 0.00 0.00 0.00 2.85
2790 6485 8.521176 TGTCTGTAGTGTACCTTTTATCTTCTC 58.479 37.037 0.00 0.00 0.00 2.87
2791 6486 8.741841 GTCTGTAGTGTACCTTTTATCTTCTCT 58.258 37.037 0.00 0.00 0.00 3.10
2792 6487 8.958506 TCTGTAGTGTACCTTTTATCTTCTCTC 58.041 37.037 0.00 0.00 0.00 3.20
2793 6488 8.880991 TGTAGTGTACCTTTTATCTTCTCTCT 57.119 34.615 0.00 0.00 0.00 3.10
2807 6502 9.809096 TTATCTTCTCTCTTATGTAGTTGCTTG 57.191 33.333 0.00 0.00 0.00 4.01
2808 6503 7.233389 TCTTCTCTCTTATGTAGTTGCTTGT 57.767 36.000 0.00 0.00 0.00 3.16
2809 6504 8.349568 TCTTCTCTCTTATGTAGTTGCTTGTA 57.650 34.615 0.00 0.00 0.00 2.41
2812 6507 8.349568 TCTCTCTTATGTAGTTGCTTGTAAGA 57.650 34.615 0.00 0.00 0.00 2.10
2813 6508 8.803235 TCTCTCTTATGTAGTTGCTTGTAAGAA 58.197 33.333 0.00 0.00 30.47 2.52
2815 6510 8.803235 TCTCTTATGTAGTTGCTTGTAAGAAGA 58.197 33.333 0.00 0.00 30.47 2.87
2816 6511 8.758633 TCTTATGTAGTTGCTTGTAAGAAGAC 57.241 34.615 0.00 0.00 0.00 3.01
2817 6512 8.364894 TCTTATGTAGTTGCTTGTAAGAAGACA 58.635 33.333 0.00 0.00 0.00 3.41
2818 6513 6.787085 ATGTAGTTGCTTGTAAGAAGACAC 57.213 37.500 0.00 0.00 0.00 3.67
2820 6515 4.150897 AGTTGCTTGTAAGAAGACACCA 57.849 40.909 0.00 0.00 0.00 4.17
2821 6516 4.718961 AGTTGCTTGTAAGAAGACACCAT 58.281 39.130 0.00 0.00 0.00 3.55
2824 6519 3.181445 TGCTTGTAAGAAGACACCATGGT 60.181 43.478 13.00 13.00 0.00 3.55
2826 6521 4.278419 GCTTGTAAGAAGACACCATGGTTT 59.722 41.667 16.84 9.58 0.00 3.27
2828 6523 5.042463 TGTAAGAAGACACCATGGTTTCA 57.958 39.130 28.36 9.34 0.00 2.69
2829 6524 5.063204 TGTAAGAAGACACCATGGTTTCAG 58.937 41.667 28.36 14.99 0.00 3.02
2830 6525 3.864789 AGAAGACACCATGGTTTCAGT 57.135 42.857 28.36 18.01 0.00 3.41
2831 6526 4.170468 AGAAGACACCATGGTTTCAGTT 57.830 40.909 28.36 17.14 0.00 3.16
2832 6527 5.304686 AGAAGACACCATGGTTTCAGTTA 57.695 39.130 28.36 0.00 0.00 2.24
2833 6528 5.690865 AGAAGACACCATGGTTTCAGTTAA 58.309 37.500 28.36 0.00 0.00 2.01
2835 6530 6.777580 AGAAGACACCATGGTTTCAGTTAAAT 59.222 34.615 28.36 7.26 0.00 1.40
2837 6532 6.068010 AGACACCATGGTTTCAGTTAAATGA 58.932 36.000 28.36 0.56 0.00 2.57
2838 6533 6.549364 AGACACCATGGTTTCAGTTAAATGAA 59.451 34.615 28.36 13.98 37.41 2.57
2839 6534 7.069331 AGACACCATGGTTTCAGTTAAATGAAA 59.931 33.333 28.36 23.18 44.72 2.69
2849 6544 8.704849 TTTCAGTTAAATGAAATGGAAGAGGA 57.295 30.769 23.18 1.77 42.68 3.71
2850 6545 8.704849 TTCAGTTAAATGAAATGGAAGAGGAA 57.295 30.769 15.48 0.00 36.28 3.36
2851 6546 8.704849 TCAGTTAAATGAAATGGAAGAGGAAA 57.295 30.769 2.54 0.00 33.85 3.13
2853 6548 8.579863 CAGTTAAATGAAATGGAAGAGGAAACT 58.420 33.333 0.00 0.00 34.33 2.66
2901 6596 6.683974 ATTGAAAGTGATGTTCTAATCCCG 57.316 37.500 0.00 0.00 0.00 5.14
2902 6597 5.414789 TGAAAGTGATGTTCTAATCCCGA 57.585 39.130 0.00 0.00 0.00 5.14
2903 6598 5.419542 TGAAAGTGATGTTCTAATCCCGAG 58.580 41.667 0.00 0.00 0.00 4.63
2904 6599 3.460857 AGTGATGTTCTAATCCCGAGC 57.539 47.619 0.00 0.00 0.00 5.03
2907 6602 3.031013 TGATGTTCTAATCCCGAGCTCA 58.969 45.455 15.40 0.00 0.00 4.26
2908 6603 2.961526 TGTTCTAATCCCGAGCTCAC 57.038 50.000 15.40 1.13 0.00 3.51
2909 6604 2.176045 TGTTCTAATCCCGAGCTCACA 58.824 47.619 15.40 4.03 0.00 3.58
2910 6605 2.766263 TGTTCTAATCCCGAGCTCACAT 59.234 45.455 15.40 0.00 0.00 3.21
2912 6607 2.666317 TCTAATCCCGAGCTCACATGA 58.334 47.619 15.40 4.26 0.00 3.07
2913 6608 3.031013 TCTAATCCCGAGCTCACATGAA 58.969 45.455 15.40 0.00 0.00 2.57
2914 6609 3.643320 TCTAATCCCGAGCTCACATGAAT 59.357 43.478 15.40 0.00 0.00 2.57
2916 6611 2.787473 TCCCGAGCTCACATGAATTT 57.213 45.000 15.40 0.00 0.00 1.82
2917 6612 2.358957 TCCCGAGCTCACATGAATTTG 58.641 47.619 15.40 0.00 0.00 2.32
2918 6613 1.402968 CCCGAGCTCACATGAATTTGG 59.597 52.381 15.40 2.18 0.00 3.28
2920 6615 1.202222 CGAGCTCACATGAATTTGGGC 60.202 52.381 15.40 0.00 0.00 5.36
2921 6616 0.813184 AGCTCACATGAATTTGGGCG 59.187 50.000 0.00 0.00 0.00 6.13
2922 6617 0.810648 GCTCACATGAATTTGGGCGA 59.189 50.000 0.00 0.00 0.00 5.54
2923 6618 1.202114 GCTCACATGAATTTGGGCGAA 59.798 47.619 0.00 0.00 0.00 4.70
2926 6876 2.824936 TCACATGAATTTGGGCGAACAT 59.175 40.909 0.00 0.00 0.00 2.71
2930 6880 5.636965 CACATGAATTTGGGCGAACATTAAA 59.363 36.000 0.00 0.00 0.00 1.52
2933 6883 8.037758 ACATGAATTTGGGCGAACATTAAAATA 58.962 29.630 0.00 0.00 0.00 1.40
2976 7783 7.524294 AATCTGATTTTTGTGTGTGTGAAAC 57.476 32.000 0.00 0.00 37.35 2.78
2979 7786 7.151308 TCTGATTTTTGTGTGTGTGAAACTTT 58.849 30.769 0.00 0.00 38.04 2.66
2980 7787 7.114882 TGATTTTTGTGTGTGTGAAACTTTG 57.885 32.000 0.00 0.00 38.04 2.77
2981 7788 6.925718 TGATTTTTGTGTGTGTGAAACTTTGA 59.074 30.769 0.00 0.00 38.04 2.69
2987 7794 5.632764 TGTGTGTGTGAAACTTTGACAAATG 59.367 36.000 0.05 0.00 38.04 2.32
2990 7797 6.703607 TGTGTGTGAAACTTTGACAAATGTTT 59.296 30.769 19.46 19.46 42.90 2.83
2991 7798 7.225538 TGTGTGTGAAACTTTGACAAATGTTTT 59.774 29.630 19.95 12.60 41.29 2.43
2992 7799 7.739911 GTGTGTGAAACTTTGACAAATGTTTTC 59.260 33.333 19.95 17.97 41.29 2.29
2993 7800 7.439356 TGTGTGAAACTTTGACAAATGTTTTCA 59.561 29.630 19.95 19.48 41.29 2.69
2994 7801 8.442384 GTGTGAAACTTTGACAAATGTTTTCAT 58.558 29.630 22.48 8.86 41.29 2.57
2995 7802 9.645059 TGTGAAACTTTGACAAATGTTTTCATA 57.355 25.926 22.48 19.55 41.29 2.15
2998 7805 8.947055 AAACTTTGACAAATGTTTTCATAGCT 57.053 26.923 16.25 0.00 39.38 3.32
3000 7807 8.356533 ACTTTGACAAATGTTTTCATAGCTTG 57.643 30.769 0.05 0.00 39.94 4.01
3001 7808 6.768029 TTGACAAATGTTTTCATAGCTTGC 57.232 33.333 0.00 0.00 39.94 4.01
3003 7810 6.279123 TGACAAATGTTTTCATAGCTTGCAA 58.721 32.000 0.00 0.00 39.94 4.08
3005 7812 7.441760 TGACAAATGTTTTCATAGCTTGCAAAT 59.558 29.630 0.00 0.00 39.94 2.32
3006 7813 8.156994 ACAAATGTTTTCATAGCTTGCAAATT 57.843 26.923 0.00 0.00 39.94 1.82
3007 7814 8.623030 ACAAATGTTTTCATAGCTTGCAAATTT 58.377 25.926 0.00 0.00 39.94 1.82
3008 7815 9.109533 CAAATGTTTTCATAGCTTGCAAATTTC 57.890 29.630 0.00 0.00 39.94 2.17
3009 7816 7.966246 ATGTTTTCATAGCTTGCAAATTTCA 57.034 28.000 0.00 0.00 38.95 2.69
3010 7817 7.966246 TGTTTTCATAGCTTGCAAATTTCAT 57.034 28.000 0.00 0.00 0.00 2.57
3011 7818 8.020861 TGTTTTCATAGCTTGCAAATTTCATC 57.979 30.769 0.00 0.00 0.00 2.92
3012 7819 7.656542 TGTTTTCATAGCTTGCAAATTTCATCA 59.343 29.630 0.00 0.00 0.00 3.07
3013 7820 7.585286 TTTCATAGCTTGCAAATTTCATCAC 57.415 32.000 0.00 0.00 0.00 3.06
3015 7822 6.689554 TCATAGCTTGCAAATTTCATCACAA 58.310 32.000 0.00 0.00 0.00 3.33
3017 7824 5.204409 AGCTTGCAAATTTCATCACAAGA 57.796 34.783 0.00 0.00 37.32 3.02
3018 7825 5.790593 AGCTTGCAAATTTCATCACAAGAT 58.209 33.333 0.00 8.17 37.32 2.40
3037 7844 7.147312 ACAAGATGTCATTGTGTAAAATGTGG 58.853 34.615 1.53 0.00 39.36 4.17
3038 7845 5.713025 AGATGTCATTGTGTAAAATGTGGC 58.287 37.500 0.00 0.00 38.46 5.01
3039 7846 4.926140 TGTCATTGTGTAAAATGTGGCA 57.074 36.364 0.00 0.00 38.46 4.92
3040 7847 5.268118 TGTCATTGTGTAAAATGTGGCAA 57.732 34.783 0.00 0.00 38.46 4.52
3041 7848 5.046529 TGTCATTGTGTAAAATGTGGCAAC 58.953 37.500 0.00 0.00 38.46 4.17
3042 7849 5.046529 GTCATTGTGTAAAATGTGGCAACA 58.953 37.500 0.00 0.00 39.28 3.33
3075 7882 6.833342 AATAAAATCGATGCTCCAAAATGC 57.167 33.333 0.00 0.00 0.00 3.56
3095 7902 9.994432 AAAATGCATTTGAAAATAACGTTTTGA 57.006 22.222 24.74 0.00 34.73 2.69
3096 7903 9.994432 AAATGCATTTGAAAATAACGTTTTGAA 57.006 22.222 23.54 0.00 0.00 2.69
3098 7905 7.122550 TGCATTTGAAAATAACGTTTTGAAGC 58.877 30.769 5.91 0.00 0.00 3.86
3099 7906 7.122550 GCATTTGAAAATAACGTTTTGAAGCA 58.877 30.769 5.91 0.00 0.00 3.91
3100 7907 7.798052 GCATTTGAAAATAACGTTTTGAAGCAT 59.202 29.630 5.91 0.00 0.00 3.79
3101 7908 9.305110 CATTTGAAAATAACGTTTTGAAGCATC 57.695 29.630 5.91 0.00 0.00 3.91
3118 8083 8.338985 TGAAGCATCGATATTGTTTTTATTGC 57.661 30.769 0.00 0.00 0.00 3.56
3119 8084 7.434897 TGAAGCATCGATATTGTTTTTATTGCC 59.565 33.333 0.00 0.00 0.00 4.52
3121 8086 6.697019 AGCATCGATATTGTTTTTATTGCCAC 59.303 34.615 0.00 0.00 0.00 5.01
3122 8087 6.475076 GCATCGATATTGTTTTTATTGCCACA 59.525 34.615 0.00 0.00 0.00 4.17
3123 8088 7.169645 GCATCGATATTGTTTTTATTGCCACAT 59.830 33.333 0.00 0.00 0.00 3.21
3126 8091 9.429359 TCGATATTGTTTTTATTGCCACATTTT 57.571 25.926 0.00 0.00 0.00 1.82
3131 8096 9.680315 ATTGTTTTTATTGCCACATTTTTCATG 57.320 25.926 0.00 0.00 0.00 3.07
3133 8098 8.896744 TGTTTTTATTGCCACATTTTTCATGAA 58.103 25.926 3.38 3.38 0.00 2.57
3134 8099 9.896263 GTTTTTATTGCCACATTTTTCATGAAT 57.104 25.926 9.40 0.00 0.00 2.57
3135 8100 9.894783 TTTTTATTGCCACATTTTTCATGAATG 57.105 25.926 9.40 7.47 39.73 2.67
3136 8101 8.618702 TTTATTGCCACATTTTTCATGAATGT 57.381 26.923 9.40 8.16 45.80 2.71
3137 8102 6.730960 ATTGCCACATTTTTCATGAATGTC 57.269 33.333 9.40 1.26 43.75 3.06
3139 8104 5.795972 TGCCACATTTTTCATGAATGTCAT 58.204 33.333 9.40 0.00 43.75 3.06
3141 8106 7.557724 TGCCACATTTTTCATGAATGTCATAT 58.442 30.769 9.40 0.00 43.75 1.78
3142 8107 7.492994 TGCCACATTTTTCATGAATGTCATATG 59.507 33.333 9.40 7.69 43.75 1.78
3143 8108 7.042321 GCCACATTTTTCATGAATGTCATATGG 60.042 37.037 9.40 11.96 43.75 2.74
3144 8109 7.982919 CCACATTTTTCATGAATGTCATATGGT 59.017 33.333 9.40 0.00 43.75 3.55
3145 8110 8.813282 CACATTTTTCATGAATGTCATATGGTG 58.187 33.333 9.40 5.26 43.75 4.17
3146 8111 8.751242 ACATTTTTCATGAATGTCATATGGTGA 58.249 29.630 9.40 0.00 42.40 4.02
3148 8113 9.758651 ATTTTTCATGAATGTCATATGGTGATG 57.241 29.630 9.40 0.00 39.48 3.07
3150 8115 8.522542 TTTCATGAATGTCATATGGTGATGAA 57.477 30.769 9.40 5.40 39.48 2.57
3151 8116 8.522542 TTCATGAATGTCATATGGTGATGAAA 57.477 30.769 3.38 0.00 39.48 2.69
3152 8117 8.700439 TCATGAATGTCATATGGTGATGAAAT 57.300 30.769 2.13 0.00 39.48 2.17
3154 8119 9.758651 CATGAATGTCATATGGTGATGAAATTT 57.241 29.630 2.13 0.00 41.75 1.82
3156 8121 9.589111 TGAATGTCATATGGTGATGAAATTTTG 57.411 29.630 2.13 0.00 41.75 2.44
3157 8122 8.428186 AATGTCATATGGTGATGAAATTTTGC 57.572 30.769 2.13 0.00 39.69 3.68
3158 8123 6.932947 TGTCATATGGTGATGAAATTTTGCA 58.067 32.000 2.13 0.00 39.48 4.08
3159 8124 7.384477 TGTCATATGGTGATGAAATTTTGCAA 58.616 30.769 2.13 0.00 39.48 4.08
3161 8126 6.535865 TCATATGGTGATGAAATTTTGCAAGC 59.464 34.615 2.13 0.00 32.84 4.01
3162 8127 4.339872 TGGTGATGAAATTTTGCAAGCT 57.660 36.364 0.00 0.00 0.00 3.74
3163 8128 5.465532 TGGTGATGAAATTTTGCAAGCTA 57.534 34.783 0.00 0.00 0.00 3.32
3164 8129 6.040209 TGGTGATGAAATTTTGCAAGCTAT 57.960 33.333 0.00 0.00 0.00 2.97
3165 8130 5.870433 TGGTGATGAAATTTTGCAAGCTATG 59.130 36.000 0.00 0.00 0.00 2.23
3170 8135 8.497554 TGATGAAATTTTGCAAGCTATGAAAAC 58.502 29.630 0.00 0.00 36.24 2.43
3171 8136 7.783090 TGAAATTTTGCAAGCTATGAAAACA 57.217 28.000 0.00 0.00 36.24 2.83
3172 8137 7.853524 TGAAATTTTGCAAGCTATGAAAACAG 58.146 30.769 0.00 0.00 36.24 3.16
3173 8138 7.495279 TGAAATTTTGCAAGCTATGAAAACAGT 59.505 29.630 0.00 0.00 36.24 3.55
3174 8139 7.790823 AATTTTGCAAGCTATGAAAACAGTT 57.209 28.000 0.00 0.00 36.24 3.16
3175 8140 6.586868 TTTTGCAAGCTATGAAAACAGTTG 57.413 33.333 0.00 0.00 36.24 3.16
3176 8141 4.916983 TGCAAGCTATGAAAACAGTTGT 57.083 36.364 0.00 0.00 0.00 3.32
3177 8142 4.858935 TGCAAGCTATGAAAACAGTTGTC 58.141 39.130 0.00 0.00 0.00 3.18
3179 8144 5.163571 TGCAAGCTATGAAAACAGTTGTCAA 60.164 36.000 10.35 0.14 0.00 3.18
3180 8145 5.748152 GCAAGCTATGAAAACAGTTGTCAAA 59.252 36.000 10.35 0.00 0.00 2.69
3181 8146 6.074676 GCAAGCTATGAAAACAGTTGTCAAAG 60.075 38.462 10.35 0.00 0.00 2.77
3185 8150 6.414987 GCTATGAAAACAGTTGTCAAAGTGTC 59.585 38.462 10.35 0.00 46.96 3.67
3186 8151 5.697473 TGAAAACAGTTGTCAAAGTGTCA 57.303 34.783 3.41 3.39 46.96 3.58
3187 8152 5.457140 TGAAAACAGTTGTCAAAGTGTCAC 58.543 37.500 3.41 0.00 46.96 3.67
3189 8154 4.946784 AACAGTTGTCAAAGTGTCACTC 57.053 40.909 5.82 0.00 46.96 3.51
3190 8155 3.937814 ACAGTTGTCAAAGTGTCACTCA 58.062 40.909 5.82 0.00 44.98 3.41
3191 8156 4.323417 ACAGTTGTCAAAGTGTCACTCAA 58.677 39.130 5.82 3.39 44.98 3.02
3192 8157 4.759693 ACAGTTGTCAAAGTGTCACTCAAA 59.240 37.500 5.82 0.00 44.98 2.69
3193 8158 5.240623 ACAGTTGTCAAAGTGTCACTCAAAA 59.759 36.000 5.82 0.00 44.98 2.44
3194 8159 6.148948 CAGTTGTCAAAGTGTCACTCAAAAA 58.851 36.000 5.82 0.00 32.85 1.94
3195 8160 6.306356 CAGTTGTCAAAGTGTCACTCAAAAAG 59.694 38.462 5.82 0.00 32.85 2.27
3198 8163 6.976088 TGTCAAAGTGTCACTCAAAAAGAAA 58.024 32.000 5.82 0.00 0.00 2.52
3199 8164 7.429633 TGTCAAAGTGTCACTCAAAAAGAAAA 58.570 30.769 5.82 0.00 0.00 2.29
3200 8165 7.923344 TGTCAAAGTGTCACTCAAAAAGAAAAA 59.077 29.630 5.82 0.00 0.00 1.94
3201 8166 8.214472 GTCAAAGTGTCACTCAAAAAGAAAAAC 58.786 33.333 5.82 0.00 0.00 2.43
3202 8167 7.383843 TCAAAGTGTCACTCAAAAAGAAAAACC 59.616 33.333 5.82 0.00 0.00 3.27
3203 8168 5.399013 AGTGTCACTCAAAAAGAAAAACCG 58.601 37.500 0.00 0.00 0.00 4.44
3204 8169 5.182380 AGTGTCACTCAAAAAGAAAAACCGA 59.818 36.000 0.00 0.00 0.00 4.69
3205 8170 5.859648 GTGTCACTCAAAAAGAAAAACCGAA 59.140 36.000 0.00 0.00 0.00 4.30
3206 8171 6.363896 GTGTCACTCAAAAAGAAAAACCGAAA 59.636 34.615 0.00 0.00 0.00 3.46
3207 8172 6.363896 TGTCACTCAAAAAGAAAAACCGAAAC 59.636 34.615 0.00 0.00 0.00 2.78
3208 8173 6.584942 GTCACTCAAAAAGAAAAACCGAAACT 59.415 34.615 0.00 0.00 0.00 2.66
3209 8174 7.115805 GTCACTCAAAAAGAAAAACCGAAACTT 59.884 33.333 0.00 0.00 0.00 2.66
3210 8175 7.654116 TCACTCAAAAAGAAAAACCGAAACTTT 59.346 29.630 0.00 0.00 33.18 2.66
3211 8176 8.279800 CACTCAAAAAGAAAAACCGAAACTTTT 58.720 29.630 0.00 0.00 40.76 2.27
3212 8177 8.832521 ACTCAAAAAGAAAAACCGAAACTTTTT 58.167 25.926 0.00 0.00 45.30 1.94
3236 8201 9.528018 TTTTCCATTTTTCTGATTGTACTGTTC 57.472 29.630 0.00 0.00 0.00 3.18
3237 8202 7.815840 TCCATTTTTCTGATTGTACTGTTCA 57.184 32.000 0.00 0.00 0.00 3.18
3238 8203 7.648142 TCCATTTTTCTGATTGTACTGTTCAC 58.352 34.615 0.00 0.00 0.00 3.18
3239 8204 6.863126 CCATTTTTCTGATTGTACTGTTCACC 59.137 38.462 0.00 0.00 0.00 4.02
3240 8205 6.385649 TTTTTCTGATTGTACTGTTCACCC 57.614 37.500 0.00 0.00 0.00 4.61
3241 8206 3.313012 TCTGATTGTACTGTTCACCCG 57.687 47.619 0.00 0.00 0.00 5.28
3242 8207 2.894765 TCTGATTGTACTGTTCACCCGA 59.105 45.455 0.00 0.00 0.00 5.14
3243 8208 3.056821 TCTGATTGTACTGTTCACCCGAG 60.057 47.826 0.00 0.00 0.00 4.63
3244 8209 2.000447 GATTGTACTGTTCACCCGAGC 59.000 52.381 0.00 0.00 0.00 5.03
3245 8210 0.753867 TTGTACTGTTCACCCGAGCA 59.246 50.000 0.00 0.00 0.00 4.26
3248 8213 2.345244 CTGTTCACCCGAGCAGCT 59.655 61.111 0.00 0.00 42.56 4.24
3249 8214 1.739562 CTGTTCACCCGAGCAGCTC 60.740 63.158 12.94 12.94 42.56 4.09
3259 8224 1.819229 GAGCAGCTCGGGATCAGAA 59.181 57.895 6.67 0.00 0.00 3.02
3261 8226 1.219124 GCAGCTCGGGATCAGAACA 59.781 57.895 0.00 0.00 0.00 3.18
3262 8227 0.179062 GCAGCTCGGGATCAGAACAT 60.179 55.000 0.00 0.00 0.00 2.71
3263 8228 1.745141 GCAGCTCGGGATCAGAACATT 60.745 52.381 0.00 0.00 0.00 2.71
3264 8229 2.636830 CAGCTCGGGATCAGAACATTT 58.363 47.619 0.00 0.00 0.00 2.32
3265 8230 2.611292 CAGCTCGGGATCAGAACATTTC 59.389 50.000 0.00 0.00 0.00 2.17
3266 8231 1.943340 GCTCGGGATCAGAACATTTCC 59.057 52.381 0.00 0.00 0.00 3.13
3268 8233 1.553248 TCGGGATCAGAACATTTCCGT 59.447 47.619 0.00 0.00 37.54 4.69
3272 8237 2.939103 GGATCAGAACATTTCCGTCCAG 59.061 50.000 0.00 0.00 0.00 3.86
3276 8241 5.414789 TCAGAACATTTCCGTCCAGAATA 57.585 39.130 0.00 0.00 0.00 1.75
3277 8242 5.989477 TCAGAACATTTCCGTCCAGAATAT 58.011 37.500 0.00 0.00 0.00 1.28
3279 8244 7.735917 TCAGAACATTTCCGTCCAGAATATAT 58.264 34.615 0.00 0.00 0.00 0.86
3280 8245 8.210946 TCAGAACATTTCCGTCCAGAATATATT 58.789 33.333 0.00 0.00 0.00 1.28
3282 8247 8.840321 AGAACATTTCCGTCCAGAATATATTTG 58.160 33.333 0.00 0.85 0.00 2.32
3283 8248 6.970484 ACATTTCCGTCCAGAATATATTTGC 58.030 36.000 0.00 0.00 0.00 3.68
3285 8250 7.285401 ACATTTCCGTCCAGAATATATTTGCTT 59.715 33.333 0.00 0.00 0.00 3.91
3286 8251 7.639113 TTTCCGTCCAGAATATATTTGCTTT 57.361 32.000 0.00 0.00 0.00 3.51
3287 8252 7.639113 TTCCGTCCAGAATATATTTGCTTTT 57.361 32.000 0.00 0.00 0.00 2.27
3289 8254 7.054124 TCCGTCCAGAATATATTTGCTTTTCT 58.946 34.615 0.00 0.00 0.00 2.52
3290 8255 7.556275 TCCGTCCAGAATATATTTGCTTTTCTT 59.444 33.333 0.00 0.00 0.00 2.52
3291 8256 8.836413 CCGTCCAGAATATATTTGCTTTTCTTA 58.164 33.333 0.00 0.00 0.00 2.10
3308 8273 4.519540 TCTTAAAGCTCCATTGTTTGGC 57.480 40.909 0.00 0.00 46.01 4.52
3310 8275 4.343526 TCTTAAAGCTCCATTGTTTGGCAA 59.656 37.500 0.00 0.00 46.01 4.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.819288 CACCTAAAGCGAGTCCTCTCA 59.181 52.381 0.00 0.00 40.44 3.27
1 2 1.470112 GCACCTAAAGCGAGTCCTCTC 60.470 57.143 0.00 0.00 37.35 3.20
3 4 3.052181 GCACCTAAAGCGAGTCCTC 57.948 57.895 0.00 0.00 0.00 3.71
11 12 1.810030 CGGACCTCGCACCTAAAGC 60.810 63.158 0.00 0.00 0.00 3.51
12 13 0.037605 AACGGACCTCGCACCTAAAG 60.038 55.000 0.00 0.00 43.89 1.85
13 14 0.037975 GAACGGACCTCGCACCTAAA 60.038 55.000 0.00 0.00 43.89 1.85
14 15 1.588082 GAACGGACCTCGCACCTAA 59.412 57.895 0.00 0.00 43.89 2.69
15 16 2.345760 GGAACGGACCTCGCACCTA 61.346 63.158 0.00 0.00 43.89 3.08
16 17 3.692406 GGAACGGACCTCGCACCT 61.692 66.667 0.00 0.00 43.89 4.00
17 18 2.798148 ATTGGAACGGACCTCGCACC 62.798 60.000 2.17 0.00 43.89 5.01
18 19 0.953960 AATTGGAACGGACCTCGCAC 60.954 55.000 2.17 0.00 43.89 5.34
19 20 0.250553 AAATTGGAACGGACCTCGCA 60.251 50.000 2.17 0.00 43.89 5.10
20 21 0.879090 AAAATTGGAACGGACCTCGC 59.121 50.000 2.17 0.00 43.89 5.03
21 22 2.147958 TGAAAATTGGAACGGACCTCG 58.852 47.619 2.17 0.00 45.88 4.63
30 31 8.921353 ATGTCCAAATGATTTGAAAATTGGAA 57.079 26.923 18.82 9.15 43.26 3.53
174 176 1.200020 GTGAGACCCGCTCCAAATTTG 59.800 52.381 11.40 11.40 43.26 2.32
189 191 4.504097 CGATAGACAATTTGATGCGTGAGA 59.496 41.667 2.79 0.00 39.76 3.27
191 193 3.001228 GCGATAGACAATTTGATGCGTGA 59.999 43.478 2.79 0.00 39.76 4.35
195 197 4.277257 TGTGCGATAGACAATTTGATGC 57.723 40.909 2.79 0.00 39.76 3.91
262 266 4.031129 CCAGGCTCAGCTGCACCT 62.031 66.667 18.62 18.62 34.04 4.00
277 281 0.468400 GTAGGGTGTTTTGGTGCCCA 60.468 55.000 0.00 0.00 43.42 5.36
283 287 8.201464 AGAAAATTTTGTAGTAGGGTGTTTTGG 58.799 33.333 8.47 0.00 0.00 3.28
305 309 9.283768 TGTGTGCTAAATTCAAGAGATAAGAAA 57.716 29.630 0.00 0.00 0.00 2.52
306 310 8.846943 TGTGTGCTAAATTCAAGAGATAAGAA 57.153 30.769 0.00 0.00 0.00 2.52
307 311 8.886719 CATGTGTGCTAAATTCAAGAGATAAGA 58.113 33.333 0.00 0.00 0.00 2.10
308 312 8.671921 ACATGTGTGCTAAATTCAAGAGATAAG 58.328 33.333 0.00 0.00 0.00 1.73
434 1290 2.285756 TGGTCTTTGTGTACGCGAAAAG 59.714 45.455 15.93 13.87 0.00 2.27
512 1372 2.847234 ACACCTTGTCGGGCTCCA 60.847 61.111 0.00 0.00 36.97 3.86
529 1389 1.001293 AGAACGAGTGCAGCATCTTCA 59.999 47.619 0.00 0.00 0.00 3.02
662 1546 1.696097 AACAAGGGTGAGTCGCCAGT 61.696 55.000 23.85 15.48 35.42 4.00
669 1553 2.427095 GCACTTTCAAACAAGGGTGAGT 59.573 45.455 0.00 0.00 28.92 3.41
681 1569 2.117779 TGTGGCGCTGCACTTTCAA 61.118 52.632 16.15 0.00 0.00 2.69
704 1592 4.920640 TGATTTGTTTCCCTTAACGCAA 57.079 36.364 0.00 0.00 0.00 4.85
752 1642 1.631071 TATCCATTGCGACCAGGCCA 61.631 55.000 5.01 0.00 0.00 5.36
757 1647 5.913137 AAGAAAAATATCCATTGCGACCA 57.087 34.783 0.00 0.00 0.00 4.02
823 1718 2.364317 CGAGGAAGGAGGGCTGGA 60.364 66.667 0.00 0.00 0.00 3.86
851 1746 2.124507 CTCCGCCCTTCTTTGGTCCA 62.125 60.000 0.00 0.00 0.00 4.02
875 1770 2.203294 GTGGGTGCAAACGGAGGT 60.203 61.111 0.00 0.00 0.00 3.85
937 1838 2.194271 CGGCGAGTATTTGAAGAGGAC 58.806 52.381 0.00 0.00 0.00 3.85
1009 2124 2.777692 GAGAGGAGAGAGGAGAGAGGAA 59.222 54.545 0.00 0.00 0.00 3.36
1076 2217 0.935898 GCATCTCTGAAGACATGCGG 59.064 55.000 5.03 0.00 36.88 5.69
1088 2229 1.601171 GCCAGTGGACTGCATCTCT 59.399 57.895 15.20 0.00 42.47 3.10
1253 2394 2.256158 CGTACGTGGTTCGGCTCA 59.744 61.111 7.22 0.00 44.69 4.26
1433 3006 2.590575 CGGACGTTGTTGGGCAGT 60.591 61.111 0.00 0.00 0.00 4.40
1443 3016 2.563798 TAACCTCCGTGCGGACGTT 61.564 57.895 27.59 23.53 44.54 3.99
1464 3037 2.093235 GCTCTAGTTCCATTGCTCTGGT 60.093 50.000 5.23 0.00 37.57 4.00
1668 3965 2.209315 GCCTGGCCAAAAGCAGGAA 61.209 57.895 7.01 0.00 46.50 3.36
1748 4046 2.813908 GCGTCGGCGAACTCCAAT 60.814 61.111 16.53 0.00 41.33 3.16
1805 4112 3.721172 ATCCGCCACCTCCCTCCAT 62.721 63.158 0.00 0.00 0.00 3.41
1921 4279 1.296715 CTTACTTGGCGCACTCCCT 59.703 57.895 10.83 0.00 0.00 4.20
2036 4394 4.829518 CCGATCGCGCAGTCGACA 62.830 66.667 26.73 0.00 40.11 4.35
2074 4432 2.279851 CAACGTCCAGTGCGACCA 60.280 61.111 0.00 0.00 0.00 4.02
2101 4459 4.538283 CGATCGCGCAGTCGACCT 62.538 66.667 22.36 0.00 40.11 3.85
2177 4539 6.416750 CGTTGCAACGTATATGAGTAGATCAA 59.583 38.462 37.16 0.00 46.63 2.57
2202 4571 7.684670 TCATAGCAATACGTCAATTTTCTGTC 58.315 34.615 0.00 0.00 0.00 3.51
2204 4573 8.894409 TTTCATAGCAATACGTCAATTTTCTG 57.106 30.769 0.00 0.00 0.00 3.02
2255 4625 2.541999 GGCGTTTTGGTGATGACGAAAA 60.542 45.455 1.31 1.31 37.42 2.29
2278 4658 3.740115 ACATTTACTTCGGAGCTTGTGT 58.260 40.909 0.00 0.00 0.00 3.72
2290 4670 8.846211 CATGGACGGGAAATATTACATTTACTT 58.154 33.333 0.00 0.00 0.00 2.24
2496 4889 9.725019 TCATAAATCAACTACTCTCATTGTTGT 57.275 29.630 0.00 0.00 40.20 3.32
2538 4931 7.205297 AGCACATAATTCTTATTCATGTTGGC 58.795 34.615 0.00 0.00 0.00 4.52
2595 4988 1.414378 GTTTTTGGCCGTCGGATTTG 58.586 50.000 17.49 0.00 0.00 2.32
2596 4989 0.039888 CGTTTTTGGCCGTCGGATTT 60.040 50.000 17.49 0.00 0.00 2.17
2597 4990 0.885596 TCGTTTTTGGCCGTCGGATT 60.886 50.000 17.49 0.00 0.00 3.01
2598 4991 1.301874 TCGTTTTTGGCCGTCGGAT 60.302 52.632 17.49 0.00 0.00 4.18
2599 4992 2.108566 TCGTTTTTGGCCGTCGGA 59.891 55.556 17.49 0.00 0.00 4.55
2600 4993 0.945265 TAGTCGTTTTTGGCCGTCGG 60.945 55.000 6.99 6.99 0.00 4.79
2601 4994 0.860533 TTAGTCGTTTTTGGCCGTCG 59.139 50.000 0.00 0.00 0.00 5.12
2602 4995 3.242837 ACTTTTAGTCGTTTTTGGCCGTC 60.243 43.478 0.00 0.00 0.00 4.79
2603 4996 2.684374 ACTTTTAGTCGTTTTTGGCCGT 59.316 40.909 0.00 0.00 0.00 5.68
2604 4997 3.040099 CACTTTTAGTCGTTTTTGGCCG 58.960 45.455 0.00 0.00 0.00 6.13
2605 4998 3.377439 CCACTTTTAGTCGTTTTTGGCC 58.623 45.455 0.00 0.00 0.00 5.36
2606 4999 2.792674 GCCACTTTTAGTCGTTTTTGGC 59.207 45.455 0.00 0.00 41.41 4.52
2607 5000 3.040099 CGCCACTTTTAGTCGTTTTTGG 58.960 45.455 0.00 0.00 0.00 3.28
2608 5001 3.942739 TCGCCACTTTTAGTCGTTTTTG 58.057 40.909 0.00 0.00 0.00 2.44
2609 5002 4.319984 GGATCGCCACTTTTAGTCGTTTTT 60.320 41.667 0.00 0.00 0.00 1.94
2610 5003 3.187842 GGATCGCCACTTTTAGTCGTTTT 59.812 43.478 0.00 0.00 0.00 2.43
2611 5004 2.740447 GGATCGCCACTTTTAGTCGTTT 59.260 45.455 0.00 0.00 0.00 3.60
2612 5005 2.289195 TGGATCGCCACTTTTAGTCGTT 60.289 45.455 0.00 0.00 39.92 3.85
2613 5006 1.274167 TGGATCGCCACTTTTAGTCGT 59.726 47.619 0.00 0.00 39.92 4.34
2614 5007 2.004583 TGGATCGCCACTTTTAGTCG 57.995 50.000 0.00 0.00 39.92 4.18
2615 5008 3.071479 TGTTGGATCGCCACTTTTAGTC 58.929 45.455 0.00 0.00 45.94 2.59
2616 5009 3.134574 TGTTGGATCGCCACTTTTAGT 57.865 42.857 0.00 0.00 45.94 2.24
2617 5010 4.701956 ATTGTTGGATCGCCACTTTTAG 57.298 40.909 0.00 0.00 45.94 1.85
2618 5011 6.576662 TTAATTGTTGGATCGCCACTTTTA 57.423 33.333 0.00 0.00 45.94 1.52
2619 5012 5.461032 TTAATTGTTGGATCGCCACTTTT 57.539 34.783 0.00 0.00 45.94 2.27
2621 5014 5.461032 TTTTAATTGTTGGATCGCCACTT 57.539 34.783 0.00 0.00 45.94 3.16
2623 5016 5.445806 GCATTTTTAATTGTTGGATCGCCAC 60.446 40.000 0.00 0.00 45.94 5.01
2624 5017 4.629200 GCATTTTTAATTGTTGGATCGCCA 59.371 37.500 0.00 0.00 44.17 5.69
2625 5018 4.869861 AGCATTTTTAATTGTTGGATCGCC 59.130 37.500 0.00 0.00 0.00 5.54
2626 5019 5.576384 TCAGCATTTTTAATTGTTGGATCGC 59.424 36.000 0.00 0.00 0.00 4.58
2627 5020 7.254185 CCATCAGCATTTTTAATTGTTGGATCG 60.254 37.037 0.00 0.00 32.80 3.69
2628 5021 7.466320 GCCATCAGCATTTTTAATTGTTGGATC 60.466 37.037 4.54 0.00 42.97 3.36
2629 5022 6.316890 GCCATCAGCATTTTTAATTGTTGGAT 59.683 34.615 4.54 0.00 42.97 3.41
2630 5023 5.642919 GCCATCAGCATTTTTAATTGTTGGA 59.357 36.000 4.54 0.00 42.97 3.53
2631 5024 5.163733 GGCCATCAGCATTTTTAATTGTTGG 60.164 40.000 0.00 0.00 46.50 3.77
2632 5025 5.644636 AGGCCATCAGCATTTTTAATTGTTG 59.355 36.000 5.01 0.00 46.50 3.33
2633 5026 5.807909 AGGCCATCAGCATTTTTAATTGTT 58.192 33.333 5.01 0.00 46.50 2.83
2634 5027 5.425196 AGGCCATCAGCATTTTTAATTGT 57.575 34.783 5.01 0.00 46.50 2.71
2635 5028 7.267128 TCTTAGGCCATCAGCATTTTTAATTG 58.733 34.615 5.01 0.00 46.50 2.32
2636 5029 7.342799 TCTCTTAGGCCATCAGCATTTTTAATT 59.657 33.333 5.01 0.00 46.50 1.40
2637 5030 6.835488 TCTCTTAGGCCATCAGCATTTTTAAT 59.165 34.615 5.01 0.00 46.50 1.40
2638 5031 6.186957 TCTCTTAGGCCATCAGCATTTTTAA 58.813 36.000 5.01 0.00 46.50 1.52
2640 5033 4.603131 TCTCTTAGGCCATCAGCATTTTT 58.397 39.130 5.01 0.00 46.50 1.94
2641 5034 4.205587 CTCTCTTAGGCCATCAGCATTTT 58.794 43.478 5.01 0.00 46.50 1.82
2642 5035 3.201708 ACTCTCTTAGGCCATCAGCATTT 59.798 43.478 5.01 0.00 46.50 2.32
2643 5036 2.776536 ACTCTCTTAGGCCATCAGCATT 59.223 45.455 5.01 0.00 46.50 3.56
2644 5037 2.406559 ACTCTCTTAGGCCATCAGCAT 58.593 47.619 5.01 0.00 46.50 3.79
2645 5038 1.871418 ACTCTCTTAGGCCATCAGCA 58.129 50.000 5.01 0.00 46.50 4.41
2647 5040 2.158842 CCCAACTCTCTTAGGCCATCAG 60.159 54.545 5.01 0.00 0.00 2.90
2648 5041 1.839994 CCCAACTCTCTTAGGCCATCA 59.160 52.381 5.01 0.00 0.00 3.07
2650 5043 2.122768 CTCCCAACTCTCTTAGGCCAT 58.877 52.381 5.01 0.00 0.00 4.40
2652 5045 0.833949 CCTCCCAACTCTCTTAGGCC 59.166 60.000 0.00 0.00 0.00 5.19
2653 5046 1.867363 TCCTCCCAACTCTCTTAGGC 58.133 55.000 0.00 0.00 0.00 3.93
2654 5047 2.103941 GCATCCTCCCAACTCTCTTAGG 59.896 54.545 0.00 0.00 0.00 2.69
2655 5048 3.037549 AGCATCCTCCCAACTCTCTTAG 58.962 50.000 0.00 0.00 0.00 2.18
2657 5050 1.836802 GAGCATCCTCCCAACTCTCTT 59.163 52.381 0.00 0.00 31.68 2.85
2661 5054 1.144936 CCGAGCATCCTCCCAACTC 59.855 63.158 0.00 0.00 34.49 3.01
2663 5056 0.539986 TAACCGAGCATCCTCCCAAC 59.460 55.000 0.00 0.00 34.49 3.77
2665 5058 2.391926 TATAACCGAGCATCCTCCCA 57.608 50.000 0.00 0.00 34.49 4.37
2666 5059 3.008049 ACATTATAACCGAGCATCCTCCC 59.992 47.826 0.00 0.00 34.49 4.30
2669 5062 6.859112 AGATACATTATAACCGAGCATCCT 57.141 37.500 0.00 0.00 0.00 3.24
2670 5063 8.997621 TTTAGATACATTATAACCGAGCATCC 57.002 34.615 0.00 0.00 0.00 3.51
2700 6395 4.525487 CCATATGGGTTATGAAGCATGCTT 59.475 41.667 32.41 32.41 40.22 3.91
2728 6423 8.254178 ACTCTAGAGTATTCGTTATATGGACG 57.746 38.462 24.04 7.02 40.43 4.79
2730 6425 9.570468 ACAACTCTAGAGTATTCGTTATATGGA 57.430 33.333 25.42 0.00 41.58 3.41
2731 6426 9.828852 GACAACTCTAGAGTATTCGTTATATGG 57.171 37.037 25.42 0.00 41.58 2.74
2732 6427 9.828852 GGACAACTCTAGAGTATTCGTTATATG 57.171 37.037 25.42 17.01 41.58 1.78
2733 6428 9.796180 AGGACAACTCTAGAGTATTCGTTATAT 57.204 33.333 25.42 3.19 41.58 0.86
2734 6429 9.624373 AAGGACAACTCTAGAGTATTCGTTATA 57.376 33.333 25.42 0.00 41.58 0.98
2736 6431 7.934855 AAGGACAACTCTAGAGTATTCGTTA 57.065 36.000 25.42 0.00 41.58 3.18
2737 6432 6.837471 AAGGACAACTCTAGAGTATTCGTT 57.163 37.500 25.42 24.11 41.58 3.85
2738 6433 6.543100 CCTAAGGACAACTCTAGAGTATTCGT 59.457 42.308 25.42 20.47 41.58 3.85
2740 6435 7.339976 ACACCTAAGGACAACTCTAGAGTATTC 59.660 40.741 25.42 21.66 41.58 1.75
2741 6436 7.183460 ACACCTAAGGACAACTCTAGAGTATT 58.817 38.462 25.42 15.10 41.58 1.89
2742 6437 6.733509 ACACCTAAGGACAACTCTAGAGTAT 58.266 40.000 25.42 16.60 41.58 2.12
2743 6438 6.012683 AGACACCTAAGGACAACTCTAGAGTA 60.013 42.308 25.42 7.42 41.58 2.59
2744 6439 5.000570 ACACCTAAGGACAACTCTAGAGT 57.999 43.478 20.00 20.00 44.94 3.24
2747 6442 4.767928 ACAGACACCTAAGGACAACTCTAG 59.232 45.833 0.00 0.00 0.00 2.43
2749 6444 3.577919 ACAGACACCTAAGGACAACTCT 58.422 45.455 0.00 0.00 0.00 3.24
2750 6445 4.523558 ACTACAGACACCTAAGGACAACTC 59.476 45.833 0.00 0.00 0.00 3.01
2752 6447 4.038883 ACACTACAGACACCTAAGGACAAC 59.961 45.833 0.00 0.00 0.00 3.32
2754 6449 3.840991 ACACTACAGACACCTAAGGACA 58.159 45.455 0.00 0.00 0.00 4.02
2755 6450 4.157472 GGTACACTACAGACACCTAAGGAC 59.843 50.000 0.00 0.00 0.00 3.85
2756 6451 4.043812 AGGTACACTACAGACACCTAAGGA 59.956 45.833 0.00 0.00 37.85 3.36
2757 6452 4.342359 AGGTACACTACAGACACCTAAGG 58.658 47.826 0.00 0.00 37.85 2.69
2758 6453 5.979288 AAGGTACACTACAGACACCTAAG 57.021 43.478 0.00 0.00 38.67 2.18
2759 6454 6.736110 AAAAGGTACACTACAGACACCTAA 57.264 37.500 0.00 0.00 38.67 2.69
2761 6456 6.724905 AGATAAAAGGTACACTACAGACACCT 59.275 38.462 0.00 0.00 41.38 4.00
2762 6457 6.932947 AGATAAAAGGTACACTACAGACACC 58.067 40.000 0.00 0.00 0.00 4.16
2763 6458 8.305317 AGAAGATAAAAGGTACACTACAGACAC 58.695 37.037 0.00 0.00 0.00 3.67
2764 6459 8.418597 AGAAGATAAAAGGTACACTACAGACA 57.581 34.615 0.00 0.00 0.00 3.41
2765 6460 8.741841 AGAGAAGATAAAAGGTACACTACAGAC 58.258 37.037 0.00 0.00 0.00 3.51
2766 6461 8.880991 AGAGAAGATAAAAGGTACACTACAGA 57.119 34.615 0.00 0.00 0.00 3.41
2768 6463 8.880991 AGAGAGAAGATAAAAGGTACACTACA 57.119 34.615 0.00 0.00 0.00 2.74
2781 6476 9.809096 CAAGCAACTACATAAGAGAGAAGATAA 57.191 33.333 0.00 0.00 0.00 1.75
2782 6477 8.972127 ACAAGCAACTACATAAGAGAGAAGATA 58.028 33.333 0.00 0.00 0.00 1.98
2783 6478 7.846066 ACAAGCAACTACATAAGAGAGAAGAT 58.154 34.615 0.00 0.00 0.00 2.40
2784 6479 7.233389 ACAAGCAACTACATAAGAGAGAAGA 57.767 36.000 0.00 0.00 0.00 2.87
2785 6480 8.988064 TTACAAGCAACTACATAAGAGAGAAG 57.012 34.615 0.00 0.00 0.00 2.85
2786 6481 8.803235 TCTTACAAGCAACTACATAAGAGAGAA 58.197 33.333 0.00 0.00 0.00 2.87
2787 6482 8.349568 TCTTACAAGCAACTACATAAGAGAGA 57.650 34.615 0.00 0.00 0.00 3.10
2788 6483 8.988064 TTCTTACAAGCAACTACATAAGAGAG 57.012 34.615 0.00 0.00 32.03 3.20
2789 6484 8.803235 TCTTCTTACAAGCAACTACATAAGAGA 58.197 33.333 0.00 0.00 32.03 3.10
2790 6485 8.865001 GTCTTCTTACAAGCAACTACATAAGAG 58.135 37.037 0.00 0.00 32.03 2.85
2791 6486 8.364894 TGTCTTCTTACAAGCAACTACATAAGA 58.635 33.333 0.00 0.00 0.00 2.10
2792 6487 8.436200 GTGTCTTCTTACAAGCAACTACATAAG 58.564 37.037 0.00 0.00 0.00 1.73
2793 6488 7.386848 GGTGTCTTCTTACAAGCAACTACATAA 59.613 37.037 0.00 0.00 0.00 1.90
2795 6490 5.701290 GGTGTCTTCTTACAAGCAACTACAT 59.299 40.000 0.00 0.00 0.00 2.29
2796 6491 5.054477 GGTGTCTTCTTACAAGCAACTACA 58.946 41.667 0.00 0.00 0.00 2.74
2797 6492 5.054477 TGGTGTCTTCTTACAAGCAACTAC 58.946 41.667 0.00 0.00 0.00 2.73
2798 6493 5.284861 TGGTGTCTTCTTACAAGCAACTA 57.715 39.130 0.00 0.00 0.00 2.24
2799 6494 4.150897 TGGTGTCTTCTTACAAGCAACT 57.849 40.909 0.00 0.00 0.00 3.16
2801 6496 3.820467 CCATGGTGTCTTCTTACAAGCAA 59.180 43.478 2.57 0.00 0.00 3.91
2802 6497 3.181445 ACCATGGTGTCTTCTTACAAGCA 60.181 43.478 18.99 0.00 0.00 3.91
2805 6500 5.441500 TGAAACCATGGTGTCTTCTTACAA 58.558 37.500 30.92 9.65 33.67 2.41
2806 6501 5.042463 TGAAACCATGGTGTCTTCTTACA 57.958 39.130 30.92 10.96 33.67 2.41
2807 6502 5.063880 ACTGAAACCATGGTGTCTTCTTAC 58.936 41.667 30.92 8.48 33.67 2.34
2808 6503 5.304686 ACTGAAACCATGGTGTCTTCTTA 57.695 39.130 30.92 13.20 33.67 2.10
2809 6504 4.170468 ACTGAAACCATGGTGTCTTCTT 57.830 40.909 30.92 15.85 33.67 2.52
2812 6507 6.549364 TCATTTAACTGAAACCATGGTGTCTT 59.451 34.615 30.92 21.55 33.67 3.01
2813 6508 6.068010 TCATTTAACTGAAACCATGGTGTCT 58.932 36.000 30.92 16.72 33.67 3.41
2815 6510 6.723298 TTCATTTAACTGAAACCATGGTGT 57.277 33.333 20.60 14.35 32.35 4.16
2816 6511 7.118101 CCATTTCATTTAACTGAAACCATGGTG 59.882 37.037 20.60 8.42 45.21 4.17
2817 6512 7.016072 TCCATTTCATTTAACTGAAACCATGGT 59.984 33.333 24.29 13.00 45.21 3.55
2818 6513 7.385267 TCCATTTCATTTAACTGAAACCATGG 58.615 34.615 21.84 21.84 45.21 3.66
2820 6515 8.869109 TCTTCCATTTCATTTAACTGAAACCAT 58.131 29.630 19.58 5.39 45.21 3.55
2821 6516 8.243961 TCTTCCATTTCATTTAACTGAAACCA 57.756 30.769 19.58 7.16 45.21 3.67
2824 6519 8.704849 TCCTCTTCCATTTCATTTAACTGAAA 57.295 30.769 19.50 19.50 46.13 2.69
2826 6521 8.576442 GTTTCCTCTTCCATTTCATTTAACTGA 58.424 33.333 0.00 0.00 0.00 3.41
2828 6523 8.712228 AGTTTCCTCTTCCATTTCATTTAACT 57.288 30.769 0.00 0.00 0.00 2.24
2829 6524 8.797438 AGAGTTTCCTCTTCCATTTCATTTAAC 58.203 33.333 0.00 0.00 46.08 2.01
2830 6525 8.940397 AGAGTTTCCTCTTCCATTTCATTTAA 57.060 30.769 0.00 0.00 46.08 1.52
2876 6571 7.393234 TCGGGATTAGAACATCACTTTCAATTT 59.607 33.333 0.00 0.00 0.00 1.82
2877 6572 6.884295 TCGGGATTAGAACATCACTTTCAATT 59.116 34.615 0.00 0.00 0.00 2.32
2878 6573 6.414732 TCGGGATTAGAACATCACTTTCAAT 58.585 36.000 0.00 0.00 0.00 2.57
2879 6574 5.800296 TCGGGATTAGAACATCACTTTCAA 58.200 37.500 0.00 0.00 0.00 2.69
2880 6575 5.414789 TCGGGATTAGAACATCACTTTCA 57.585 39.130 0.00 0.00 0.00 2.69
2883 6578 3.452627 AGCTCGGGATTAGAACATCACTT 59.547 43.478 0.00 0.00 0.00 3.16
2884 6579 3.034635 AGCTCGGGATTAGAACATCACT 58.965 45.455 0.00 0.00 0.00 3.41
2885 6580 3.181475 TGAGCTCGGGATTAGAACATCAC 60.181 47.826 9.64 0.00 0.00 3.06
2886 6581 3.031013 TGAGCTCGGGATTAGAACATCA 58.969 45.455 9.64 0.00 0.00 3.07
2887 6582 3.181475 TGTGAGCTCGGGATTAGAACATC 60.181 47.826 9.64 0.00 0.00 3.06
2888 6583 2.766263 TGTGAGCTCGGGATTAGAACAT 59.234 45.455 9.64 0.00 0.00 2.71
2889 6584 2.176045 TGTGAGCTCGGGATTAGAACA 58.824 47.619 9.64 1.22 0.00 3.18
2890 6585 2.961526 TGTGAGCTCGGGATTAGAAC 57.038 50.000 9.64 0.00 0.00 3.01
2892 6587 2.666317 TCATGTGAGCTCGGGATTAGA 58.334 47.619 9.64 0.00 0.00 2.10
2897 6592 2.358957 CAAATTCATGTGAGCTCGGGA 58.641 47.619 9.64 0.67 0.00 5.14
2899 6594 1.402968 CCCAAATTCATGTGAGCTCGG 59.597 52.381 9.64 0.00 0.00 4.63
2900 6595 1.202222 GCCCAAATTCATGTGAGCTCG 60.202 52.381 9.64 0.00 0.00 5.03
2901 6596 1.202222 CGCCCAAATTCATGTGAGCTC 60.202 52.381 6.82 6.82 0.00 4.09
2902 6597 0.813184 CGCCCAAATTCATGTGAGCT 59.187 50.000 0.00 0.00 0.00 4.09
2903 6598 0.810648 TCGCCCAAATTCATGTGAGC 59.189 50.000 0.00 0.00 0.00 4.26
2904 6599 2.228582 TGTTCGCCCAAATTCATGTGAG 59.771 45.455 0.00 0.00 0.00 3.51
2907 6602 3.959535 AATGTTCGCCCAAATTCATGT 57.040 38.095 0.00 0.00 0.00 3.21
2908 6603 6.718454 TTTTAATGTTCGCCCAAATTCATG 57.282 33.333 0.00 0.00 0.00 3.07
2909 6604 9.612066 ATTATTTTAATGTTCGCCCAAATTCAT 57.388 25.926 0.00 0.00 0.00 2.57
2950 6900 8.442384 GTTTCACACACACAAAAATCAGATTTT 58.558 29.630 14.43 14.43 43.83 1.82
2953 6903 6.866480 AGTTTCACACACACAAAAATCAGAT 58.134 32.000 0.00 0.00 0.00 2.90
2954 6904 6.266168 AGTTTCACACACACAAAAATCAGA 57.734 33.333 0.00 0.00 0.00 3.27
2956 6906 6.925718 TCAAAGTTTCACACACACAAAAATCA 59.074 30.769 0.00 0.00 0.00 2.57
2957 6907 7.095857 TGTCAAAGTTTCACACACACAAAAATC 60.096 33.333 0.00 0.00 0.00 2.17
2963 6913 4.837896 TTGTCAAAGTTTCACACACACA 57.162 36.364 0.00 0.00 0.00 3.72
2965 7772 5.777802 ACATTTGTCAAAGTTTCACACACA 58.222 33.333 4.03 0.00 0.00 3.72
2972 7779 9.034544 AGCTATGAAAACATTTGTCAAAGTTTC 57.965 29.630 18.13 17.63 33.45 2.78
2976 7783 7.042590 TGCAAGCTATGAAAACATTTGTCAAAG 60.043 33.333 4.03 0.00 0.00 2.77
2979 7786 5.840715 TGCAAGCTATGAAAACATTTGTCA 58.159 33.333 0.00 0.00 0.00 3.58
2980 7787 6.768029 TTGCAAGCTATGAAAACATTTGTC 57.232 33.333 0.00 0.00 0.00 3.18
2981 7788 7.733402 ATTTGCAAGCTATGAAAACATTTGT 57.267 28.000 0.00 0.00 39.42 2.83
2987 7794 7.953710 GTGATGAAATTTGCAAGCTATGAAAAC 59.046 33.333 0.00 0.00 39.42 2.43
2990 7797 6.689554 TGTGATGAAATTTGCAAGCTATGAA 58.310 32.000 0.00 0.00 0.00 2.57
2991 7798 6.270156 TGTGATGAAATTTGCAAGCTATGA 57.730 33.333 0.00 0.00 0.00 2.15
2992 7799 6.809689 TCTTGTGATGAAATTTGCAAGCTATG 59.190 34.615 0.00 0.00 33.10 2.23
2993 7800 6.927416 TCTTGTGATGAAATTTGCAAGCTAT 58.073 32.000 0.00 0.00 33.10 2.97
2994 7801 6.330004 TCTTGTGATGAAATTTGCAAGCTA 57.670 33.333 0.00 0.00 33.10 3.32
2995 7802 5.204409 TCTTGTGATGAAATTTGCAAGCT 57.796 34.783 0.00 0.00 33.10 3.74
3012 7819 7.147312 CCACATTTTACACAATGACATCTTGT 58.853 34.615 6.99 6.99 37.55 3.16
3013 7820 6.089820 GCCACATTTTACACAATGACATCTTG 59.910 38.462 0.48 0.00 37.55 3.02
3015 7822 5.243507 TGCCACATTTTACACAATGACATCT 59.756 36.000 0.48 0.00 37.55 2.90
3017 7824 5.465532 TGCCACATTTTACACAATGACAT 57.534 34.783 0.48 0.00 37.55 3.06
3018 7825 4.926140 TGCCACATTTTACACAATGACA 57.074 36.364 0.48 0.00 37.55 3.58
3019 7826 5.046529 TGTTGCCACATTTTACACAATGAC 58.953 37.500 0.48 0.00 37.55 3.06
3021 7828 5.980698 TTGTTGCCACATTTTACACAATG 57.019 34.783 0.00 0.00 39.67 2.82
3022 7829 6.992063 TTTTGTTGCCACATTTTACACAAT 57.008 29.167 0.00 0.00 31.06 2.71
3024 7831 6.992063 ATTTTTGTTGCCACATTTTACACA 57.008 29.167 0.00 0.00 31.06 3.72
3049 7856 8.177013 GCATTTTGGAGCATCGATTTTATTTTT 58.823 29.630 0.00 0.00 34.37 1.94
3050 7857 7.333921 TGCATTTTGGAGCATCGATTTTATTTT 59.666 29.630 0.00 0.00 35.51 1.82
3053 7860 5.904941 TGCATTTTGGAGCATCGATTTTAT 58.095 33.333 0.00 0.00 35.51 1.40
3055 7862 4.191033 TGCATTTTGGAGCATCGATTTT 57.809 36.364 0.00 0.00 35.51 1.82
3056 7863 3.872511 TGCATTTTGGAGCATCGATTT 57.127 38.095 0.00 0.00 35.51 2.17
3063 7870 7.570875 CGTTATTTTCAAATGCATTTTGGAGCA 60.571 33.333 21.95 8.19 44.07 4.26
3064 7871 6.737750 CGTTATTTTCAAATGCATTTTGGAGC 59.262 34.615 21.95 7.15 44.07 4.70
3065 7872 7.795859 ACGTTATTTTCAAATGCATTTTGGAG 58.204 30.769 21.95 11.03 44.07 3.86
3066 7873 7.721286 ACGTTATTTTCAAATGCATTTTGGA 57.279 28.000 21.95 14.23 44.07 3.53
3067 7874 8.779603 AAACGTTATTTTCAAATGCATTTTGG 57.220 26.923 21.95 12.10 44.07 3.28
3069 7876 9.994432 TCAAAACGTTATTTTCAAATGCATTTT 57.006 22.222 21.95 10.00 0.00 1.82
3070 7877 9.994432 TTCAAAACGTTATTTTCAAATGCATTT 57.006 22.222 18.99 18.99 0.00 2.32
3071 7878 9.649024 CTTCAAAACGTTATTTTCAAATGCATT 57.351 25.926 5.99 5.99 0.00 3.56
3072 7879 7.798052 GCTTCAAAACGTTATTTTCAAATGCAT 59.202 29.630 0.00 0.00 0.00 3.96
3073 7880 7.122550 GCTTCAAAACGTTATTTTCAAATGCA 58.877 30.769 0.00 0.00 0.00 3.96
3074 7881 7.122550 TGCTTCAAAACGTTATTTTCAAATGC 58.877 30.769 0.00 0.00 0.00 3.56
3075 7882 9.305110 GATGCTTCAAAACGTTATTTTCAAATG 57.695 29.630 0.00 0.00 0.00 2.32
3077 7884 7.432545 TCGATGCTTCAAAACGTTATTTTCAAA 59.567 29.630 0.00 0.00 0.00 2.69
3078 7885 6.913132 TCGATGCTTCAAAACGTTATTTTCAA 59.087 30.769 0.00 0.00 0.00 2.69
3079 7886 6.431278 TCGATGCTTCAAAACGTTATTTTCA 58.569 32.000 0.00 0.00 0.00 2.69
3081 7888 9.567848 AATATCGATGCTTCAAAACGTTATTTT 57.432 25.926 8.54 0.00 30.31 1.82
3082 7889 9.009327 CAATATCGATGCTTCAAAACGTTATTT 57.991 29.630 8.54 0.00 31.34 1.40
3083 7890 8.181573 ACAATATCGATGCTTCAAAACGTTATT 58.818 29.630 8.54 0.00 32.79 1.40
3085 7892 7.067532 ACAATATCGATGCTTCAAAACGTTA 57.932 32.000 8.54 0.00 0.00 3.18
3087 7894 5.545658 ACAATATCGATGCTTCAAAACGT 57.454 34.783 8.54 0.00 0.00 3.99
3088 7895 6.853279 AAACAATATCGATGCTTCAAAACG 57.147 33.333 8.54 0.00 0.00 3.60
3092 7899 8.806634 GCAATAAAAACAATATCGATGCTTCAA 58.193 29.630 8.54 0.00 0.00 2.69
3093 7900 7.434897 GGCAATAAAAACAATATCGATGCTTCA 59.565 33.333 8.54 0.00 0.00 3.02
3094 7901 7.434897 TGGCAATAAAAACAATATCGATGCTTC 59.565 33.333 8.54 0.00 0.00 3.86
3095 7902 7.222611 GTGGCAATAAAAACAATATCGATGCTT 59.777 33.333 8.54 0.00 0.00 3.91
3096 7903 6.697019 GTGGCAATAAAAACAATATCGATGCT 59.303 34.615 8.54 0.00 0.00 3.79
3098 7905 7.984002 TGTGGCAATAAAAACAATATCGATG 57.016 32.000 8.54 0.00 0.00 3.84
3099 7906 9.598517 AAATGTGGCAATAAAAACAATATCGAT 57.401 25.926 2.16 2.16 0.00 3.59
3100 7907 8.994429 AAATGTGGCAATAAAAACAATATCGA 57.006 26.923 0.00 0.00 0.00 3.59
3118 8083 7.982919 ACCATATGACATTCATGAAAAATGTGG 59.017 33.333 22.78 22.78 45.02 4.17
3119 8084 8.813282 CACCATATGACATTCATGAAAAATGTG 58.187 33.333 15.99 10.45 45.02 3.21
3121 8086 9.758651 ATCACCATATGACATTCATGAAAAATG 57.241 29.630 13.09 9.06 41.24 2.32
3122 8087 9.758651 CATCACCATATGACATTCATGAAAAAT 57.241 29.630 13.09 6.51 41.24 1.82
3123 8088 8.968969 TCATCACCATATGACATTCATGAAAAA 58.031 29.630 13.09 0.00 41.24 1.94
3126 8091 8.522542 TTTCATCACCATATGACATTCATGAA 57.477 30.769 11.26 11.26 41.24 2.57
3128 8093 9.758651 AAATTTCATCACCATATGACATTCATG 57.241 29.630 3.65 0.00 41.24 3.07
3131 8096 8.545420 GCAAAATTTCATCACCATATGACATTC 58.455 33.333 3.65 0.00 41.24 2.67
3133 8098 7.557724 TGCAAAATTTCATCACCATATGACAT 58.442 30.769 3.65 0.00 41.24 3.06
3134 8099 6.932947 TGCAAAATTTCATCACCATATGACA 58.067 32.000 3.65 0.00 41.24 3.58
3135 8100 7.464977 GCTTGCAAAATTTCATCACCATATGAC 60.465 37.037 3.65 0.00 41.24 3.06
3136 8101 6.535865 GCTTGCAAAATTTCATCACCATATGA 59.464 34.615 3.65 0.00 43.13 2.15
3137 8102 6.537301 AGCTTGCAAAATTTCATCACCATATG 59.463 34.615 0.00 0.00 0.00 1.78
3139 8104 6.040209 AGCTTGCAAAATTTCATCACCATA 57.960 33.333 0.00 0.00 0.00 2.74
3141 8106 4.339872 AGCTTGCAAAATTTCATCACCA 57.660 36.364 0.00 0.00 0.00 4.17
3142 8107 6.101332 TCATAGCTTGCAAAATTTCATCACC 58.899 36.000 0.00 0.00 0.00 4.02
3143 8108 7.585286 TTCATAGCTTGCAAAATTTCATCAC 57.415 32.000 0.00 0.00 0.00 3.06
3144 8109 8.497554 GTTTTCATAGCTTGCAAAATTTCATCA 58.502 29.630 0.00 0.00 0.00 3.07
3145 8110 8.497554 TGTTTTCATAGCTTGCAAAATTTCATC 58.502 29.630 0.00 0.00 0.00 2.92
3146 8111 8.380743 TGTTTTCATAGCTTGCAAAATTTCAT 57.619 26.923 0.00 0.00 0.00 2.57
3148 8113 7.854534 ACTGTTTTCATAGCTTGCAAAATTTC 58.145 30.769 0.00 0.00 0.00 2.17
3150 8115 7.280652 ACAACTGTTTTCATAGCTTGCAAAATT 59.719 29.630 0.00 0.00 0.00 1.82
3151 8116 6.762661 ACAACTGTTTTCATAGCTTGCAAAAT 59.237 30.769 0.00 0.00 0.00 1.82
3152 8117 6.105333 ACAACTGTTTTCATAGCTTGCAAAA 58.895 32.000 0.00 0.00 0.00 2.44
3154 8119 5.163571 TGACAACTGTTTTCATAGCTTGCAA 60.164 36.000 5.33 0.00 0.00 4.08
3156 8121 4.858935 TGACAACTGTTTTCATAGCTTGC 58.141 39.130 5.33 0.00 0.00 4.01
3157 8122 6.974622 ACTTTGACAACTGTTTTCATAGCTTG 59.025 34.615 19.95 5.37 0.00 4.01
3158 8123 6.974622 CACTTTGACAACTGTTTTCATAGCTT 59.025 34.615 19.95 6.01 0.00 3.74
3159 8124 6.095440 ACACTTTGACAACTGTTTTCATAGCT 59.905 34.615 19.95 9.85 0.00 3.32
3161 8126 7.429340 GTGACACTTTGACAACTGTTTTCATAG 59.571 37.037 19.01 19.01 0.00 2.23
3162 8127 7.120579 AGTGACACTTTGACAACTGTTTTCATA 59.879 33.333 9.92 5.18 0.00 2.15
3163 8128 6.071952 AGTGACACTTTGACAACTGTTTTCAT 60.072 34.615 9.92 0.00 0.00 2.57
3164 8129 5.240623 AGTGACACTTTGACAACTGTTTTCA 59.759 36.000 1.07 5.33 0.00 2.69
3165 8130 5.699839 AGTGACACTTTGACAACTGTTTTC 58.300 37.500 1.07 0.00 0.00 2.29
3170 8135 4.944962 TTGAGTGACACTTTGACAACTG 57.055 40.909 10.01 0.00 0.00 3.16
3171 8136 5.957842 TTTTGAGTGACACTTTGACAACT 57.042 34.783 10.01 0.00 0.00 3.16
3172 8137 6.378582 TCTTTTTGAGTGACACTTTGACAAC 58.621 36.000 10.01 0.00 0.00 3.32
3173 8138 6.567687 TCTTTTTGAGTGACACTTTGACAA 57.432 33.333 10.01 6.46 0.00 3.18
3174 8139 6.567687 TTCTTTTTGAGTGACACTTTGACA 57.432 33.333 10.01 0.00 0.00 3.58
3175 8140 7.867445 TTTTCTTTTTGAGTGACACTTTGAC 57.133 32.000 10.01 0.00 0.00 3.18
3176 8141 7.383843 GGTTTTTCTTTTTGAGTGACACTTTGA 59.616 33.333 10.01 0.00 0.00 2.69
3177 8142 7.509797 GGTTTTTCTTTTTGAGTGACACTTTG 58.490 34.615 10.01 0.00 0.00 2.77
3179 8144 5.861787 CGGTTTTTCTTTTTGAGTGACACTT 59.138 36.000 10.01 0.00 0.00 3.16
3180 8145 5.182380 TCGGTTTTTCTTTTTGAGTGACACT 59.818 36.000 8.12 8.12 0.00 3.55
3181 8146 5.395642 TCGGTTTTTCTTTTTGAGTGACAC 58.604 37.500 0.00 0.00 0.00 3.67
3184 8149 6.683715 AGTTTCGGTTTTTCTTTTTGAGTGA 58.316 32.000 0.00 0.00 0.00 3.41
3185 8150 6.944557 AGTTTCGGTTTTTCTTTTTGAGTG 57.055 33.333 0.00 0.00 0.00 3.51
3186 8151 7.956420 AAAGTTTCGGTTTTTCTTTTTGAGT 57.044 28.000 0.00 0.00 0.00 3.41
3209 8174 9.883142 AACAGTACAATCAGAAAAATGGAAAAA 57.117 25.926 0.00 0.00 0.00 1.94
3210 8175 9.528018 GAACAGTACAATCAGAAAAATGGAAAA 57.472 29.630 0.00 0.00 0.00 2.29
3211 8176 8.690884 TGAACAGTACAATCAGAAAAATGGAAA 58.309 29.630 0.00 0.00 0.00 3.13
3212 8177 8.134895 GTGAACAGTACAATCAGAAAAATGGAA 58.865 33.333 0.00 0.00 0.00 3.53
3214 8179 6.863126 GGTGAACAGTACAATCAGAAAAATGG 59.137 38.462 0.00 0.00 0.00 3.16
3216 8181 6.293955 CGGGTGAACAGTACAATCAGAAAAAT 60.294 38.462 0.00 0.00 0.00 1.82
3217 8182 5.008217 CGGGTGAACAGTACAATCAGAAAAA 59.992 40.000 0.00 0.00 0.00 1.94
3218 8183 4.513692 CGGGTGAACAGTACAATCAGAAAA 59.486 41.667 0.00 0.00 0.00 2.29
3219 8184 4.062293 CGGGTGAACAGTACAATCAGAAA 58.938 43.478 0.00 0.00 0.00 2.52
3220 8185 3.322541 TCGGGTGAACAGTACAATCAGAA 59.677 43.478 0.00 0.00 0.00 3.02
3222 8187 3.254060 CTCGGGTGAACAGTACAATCAG 58.746 50.000 0.00 0.00 0.00 2.90
3224 8189 2.000447 GCTCGGGTGAACAGTACAATC 59.000 52.381 0.00 0.00 0.00 2.67
3225 8190 1.346395 TGCTCGGGTGAACAGTACAAT 59.654 47.619 0.00 0.00 0.00 2.71
3226 8191 0.753867 TGCTCGGGTGAACAGTACAA 59.246 50.000 0.00 0.00 0.00 2.41
3227 8192 0.317160 CTGCTCGGGTGAACAGTACA 59.683 55.000 0.00 0.00 34.34 2.90
3228 8193 1.014564 GCTGCTCGGGTGAACAGTAC 61.015 60.000 0.00 0.00 39.88 2.73
3230 8195 2.031163 GCTGCTCGGGTGAACAGT 59.969 61.111 0.00 0.00 39.88 3.55
3231 8196 1.739562 GAGCTGCTCGGGTGAACAG 60.740 63.158 14.68 0.00 40.53 3.16
3241 8206 0.529555 GTTCTGATCCCGAGCTGCTC 60.530 60.000 19.53 19.53 0.00 4.26
3242 8207 1.260538 TGTTCTGATCCCGAGCTGCT 61.261 55.000 0.00 0.00 0.00 4.24
3243 8208 0.179062 ATGTTCTGATCCCGAGCTGC 60.179 55.000 0.00 0.00 0.00 5.25
3244 8209 2.322355 AATGTTCTGATCCCGAGCTG 57.678 50.000 0.00 0.00 0.00 4.24
3245 8210 2.420687 GGAAATGTTCTGATCCCGAGCT 60.421 50.000 0.00 0.00 0.00 4.09
3246 8211 1.943340 GGAAATGTTCTGATCCCGAGC 59.057 52.381 0.00 0.00 0.00 5.03
3247 8212 2.205074 CGGAAATGTTCTGATCCCGAG 58.795 52.381 0.00 0.00 38.34 4.63
3248 8213 1.553248 ACGGAAATGTTCTGATCCCGA 59.447 47.619 0.00 0.00 39.38 5.14
3249 8214 1.933853 GACGGAAATGTTCTGATCCCG 59.066 52.381 3.86 0.00 39.38 5.14
3250 8215 2.289565 GGACGGAAATGTTCTGATCCC 58.710 52.381 3.86 0.00 39.38 3.85
3251 8216 2.939103 CTGGACGGAAATGTTCTGATCC 59.061 50.000 3.86 7.40 39.38 3.36
3252 8217 3.861840 TCTGGACGGAAATGTTCTGATC 58.138 45.455 3.86 0.00 39.38 2.92
3254 8219 3.762407 TTCTGGACGGAAATGTTCTGA 57.238 42.857 3.86 0.00 39.38 3.27
3255 8220 7.969536 ATATATTCTGGACGGAAATGTTCTG 57.030 36.000 0.00 0.00 41.86 3.02
3257 8222 7.591426 GCAAATATATTCTGGACGGAAATGTTC 59.409 37.037 0.00 0.00 0.00 3.18
3259 8224 6.772716 AGCAAATATATTCTGGACGGAAATGT 59.227 34.615 0.00 0.00 0.00 2.71
3261 8226 7.823745 AAGCAAATATATTCTGGACGGAAAT 57.176 32.000 0.00 0.00 0.00 2.17
3262 8227 7.639113 AAAGCAAATATATTCTGGACGGAAA 57.361 32.000 0.00 0.00 0.00 3.13
3263 8228 7.556275 AGAAAAGCAAATATATTCTGGACGGAA 59.444 33.333 0.00 0.00 0.00 4.30
3264 8229 7.054124 AGAAAAGCAAATATATTCTGGACGGA 58.946 34.615 0.00 0.00 0.00 4.69
3265 8230 7.264373 AGAAAAGCAAATATATTCTGGACGG 57.736 36.000 0.00 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.