Multiple sequence alignment - TraesCS3D01G406200
Loading Multiple Alignment...
BLAST Results
BLAST Results - Input Sequence
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this
to extract flanking regions for cloning. If the result of the multiple sequence alignment is
not as expected, these results could be used for further investigation.
qseqid
sseqid
percentage.identical
alignment.length
no.mismatch
no.gap.openings
qstart
qend
sstart
send
evalue
bitscore
0
TraesCS3D01G406200
chr3D
100.000
2945
0
0
1
2945
520290645
520293589
0.000000e+00
5439.0
1
TraesCS3D01G406200
chr3D
92.605
933
54
5
964
1887
519948034
519947108
0.000000e+00
1327.0
2
TraesCS3D01G406200
chr3D
89.594
788
77
4
1914
2700
519946834
519946051
0.000000e+00
996.0
3
TraesCS3D01G406200
chr3D
90.468
598
48
7
1
594
567244189
567243597
0.000000e+00
780.0
4
TraesCS3D01G406200
chr3D
83.588
786
97
14
948
1722
519710344
519709580
0.000000e+00
708.0
5
TraesCS3D01G406200
chr3D
85.106
564
54
15
1244
1788
519876539
519875987
1.540000e-152
549.0
6
TraesCS3D01G406200
chr3D
78.434
779
116
23
978
1722
519714059
519713299
7.440000e-126
460.0
7
TraesCS3D01G406200
chr3D
85.284
299
26
9
596
892
569567035
569567317
2.870000e-75
292.0
8
TraesCS3D01G406200
chr3D
96.732
153
5
0
2793
2945
519883278
519883126
3.770000e-64
255.0
9
TraesCS3D01G406200
chr3D
80.000
220
33
9
674
892
2597935
2597726
5.080000e-33
152.0
10
TraesCS3D01G406200
chr3D
81.410
156
24
4
733
887
389214619
389214468
3.990000e-24
122.0
11
TraesCS3D01G406200
chr3D
91.071
56
4
1
1830
1885
305882875
305882929
1.130000e-09
75.0
12
TraesCS3D01G406200
chr3D
90.196
51
5
0
909
959
519876817
519876767
1.890000e-07
67.6
13
TraesCS3D01G406200
chr5A
94.622
595
30
2
1
594
685532631
685533224
0.000000e+00
920.0
14
TraesCS3D01G406200
chr5A
87.603
121
9
3
1890
2005
534895124
534895005
5.120000e-28
135.0
15
TraesCS3D01G406200
chr5A
94.118
51
2
1
1830
1880
69358458
69358507
3.150000e-10
76.8
16
TraesCS3D01G406200
chr5D
94.444
594
33
0
1
594
61814814
61814221
0.000000e+00
915.0
17
TraesCS3D01G406200
chr5D
90.667
600
48
7
1
594
74135738
74136335
0.000000e+00
791.0
18
TraesCS3D01G406200
chr5D
82.022
267
32
13
634
892
350596878
350597136
2.300000e-51
213.0
19
TraesCS3D01G406200
chr5D
90.000
120
7
2
1890
2005
397657930
397657812
1.830000e-32
150.0
20
TraesCS3D01G406200
chr5D
92.982
57
3
1
1830
1886
495896616
495896561
6.760000e-12
82.4
21
TraesCS3D01G406200
chr3A
84.641
918
94
22
936
1832
655507394
655506503
0.000000e+00
870.0
22
TraesCS3D01G406200
chr3A
78.965
889
126
33
953
1835
655232546
655231713
1.540000e-152
549.0
23
TraesCS3D01G406200
chr3A
78.394
523
60
22
1243
1726
655505309
655504801
1.030000e-74
291.0
24
TraesCS3D01G406200
chr3A
87.719
57
6
1
1830
1886
155011650
155011705
6.810000e-07
65.8
25
TraesCS3D01G406200
chr7A
93.110
566
34
4
1
563
48070460
48071023
0.000000e+00
824.0
26
TraesCS3D01G406200
chr7A
90.090
111
7
1
1890
1996
518551914
518552024
1.100000e-29
141.0
27
TraesCS3D01G406200
chr7A
89.655
58
5
1
1830
1887
245605451
245605507
4.070000e-09
73.1
28
TraesCS3D01G406200
chr7A
79.348
92
13
4
2170
2259
651644286
651644199
3.170000e-05
60.2
29
TraesCS3D01G406200
chr6A
91.639
598
43
6
1
594
149386620
149387214
0.000000e+00
821.0
30
TraesCS3D01G406200
chr1D
91.181
601
43
10
1
594
54899993
54900590
0.000000e+00
808.0
31
TraesCS3D01G406200
chr1D
84.767
407
46
8
1277
1667
407823576
407823982
7.650000e-106
394.0
32
TraesCS3D01G406200
chr1D
77.827
681
115
17
1017
1667
407807896
407808570
3.560000e-104
388.0
33
TraesCS3D01G406200
chr1D
95.122
41
2
0
1835
1875
26524078
26524038
6.810000e-07
65.8
34
TraesCS3D01G406200
chr6D
91.152
599
44
7
1
594
350238652
350238058
0.000000e+00
804.0
35
TraesCS3D01G406200
chr6D
81.437
167
27
4
727
892
4946397
4946560
1.840000e-27
134.0
36
TraesCS3D01G406200
chr6D
87.500
120
9
6
1890
2005
321771170
321771053
1.840000e-27
134.0
37
TraesCS3D01G406200
chr7D
90.818
599
45
8
1
594
51796893
51796300
0.000000e+00
793.0
38
TraesCS3D01G406200
chr3B
80.946
761
97
23
909
1661
684462337
684461617
2.560000e-155
558.0
39
TraesCS3D01G406200
chr3B
79.692
650
116
12
1017
1661
684268912
684268274
3.460000e-124
455.0
40
TraesCS3D01G406200
chr3B
93.266
297
16
2
596
892
422554011
422553719
4.510000e-118
435.0
41
TraesCS3D01G406200
chr3B
83.803
426
55
8
1243
1661
684320935
684320517
2.750000e-105
392.0
42
TraesCS3D01G406200
chr3B
78.818
609
102
16
978
1573
684328250
684327656
4.600000e-103
385.0
43
TraesCS3D01G406200
chr3B
83.737
289
25
8
1564
1832
684322246
684321960
1.350000e-63
254.0
44
TraesCS3D01G406200
chr3B
89.189
111
8
1
1890
1996
243766683
243766793
5.120000e-28
135.0
45
TraesCS3D01G406200
chr3B
95.238
63
3
0
1244
1306
684460083
684460021
1.870000e-17
100.0
46
TraesCS3D01G406200
chr3B
94.444
36
2
0
2222
2257
125531359
125531394
4.100000e-04
56.5
47
TraesCS3D01G406200
chr1B
83.824
408
48
10
1277
1667
548391299
548391705
3.580000e-99
372.0
48
TraesCS3D01G406200
chr1B
90.000
120
7
2
1890
2005
65555747
65555629
1.830000e-32
150.0
49
TraesCS3D01G406200
chr1B
94.595
37
2
0
2214
2250
681046474
681046510
1.140000e-04
58.4
50
TraesCS3D01G406200
chr1B
90.476
42
4
0
2216
2257
427534172
427534213
4.100000e-04
56.5
51
TraesCS3D01G406200
chr1A
84.282
369
40
10
1354
1706
503325725
503326091
7.810000e-91
344.0
52
TraesCS3D01G406200
chr1A
87.500
120
10
2
1890
2005
45789138
45789256
1.840000e-27
134.0
53
TraesCS3D01G406200
chr1A
94.595
37
2
0
2214
2250
3018838
3018874
1.140000e-04
58.4
54
TraesCS3D01G406200
chr2A
79.927
274
36
14
630
893
699576344
699576608
1.800000e-42
183.0
55
TraesCS3D01G406200
chr2A
90.000
110
7
1
1890
1995
477127620
477127511
3.960000e-29
139.0
56
TraesCS3D01G406200
chr4B
79.051
253
39
10
640
883
620172150
620172397
8.450000e-36
161.0
57
TraesCS3D01G406200
chr5B
83.871
124
14
6
770
892
399279445
399279327
2.400000e-21
113.0
58
TraesCS3D01G406200
chr6B
90.909
44
4
0
2214
2257
687964326
687964369
3.170000e-05
60.2
59
TraesCS3D01G406200
chr4A
89.362
47
5
0
2214
2260
651215987
651215941
3.170000e-05
60.2
60
TraesCS3D01G406200
chrUn
91.892
37
3
0
2214
2250
400539979
400540015
5.000000e-03
52.8
BLAST Results - HSPs grouped
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the
BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are
purely upstream or downstream may be removed if they don't overlap both primers.
query
scaffold
start
end
length
rev.comp
avg.bitscore
max.bitscore
avg.percent.identical
query.start
query.end
num_hsp
groupid
homo_length
0
TraesCS3D01G406200
chr3D
520290645
520293589
2944
False
5439.0
5439
100.0000
1
2945
1
chr3D.!!$F2
2944
1
TraesCS3D01G406200
chr3D
519946051
519948034
1983
True
1161.5
1327
91.0995
964
2700
2
chr3D.!!$R7
1736
2
TraesCS3D01G406200
chr3D
567243597
567244189
592
True
780.0
780
90.4680
1
594
1
chr3D.!!$R4
593
3
TraesCS3D01G406200
chr3D
519709580
519714059
4479
True
584.0
708
81.0110
948
1722
2
chr3D.!!$R5
774
4
TraesCS3D01G406200
chr3D
519875987
519876817
830
True
308.3
549
87.6510
909
1788
2
chr3D.!!$R6
879
5
TraesCS3D01G406200
chr5A
685532631
685533224
593
False
920.0
920
94.6220
1
594
1
chr5A.!!$F2
593
6
TraesCS3D01G406200
chr5D
61814221
61814814
593
True
915.0
915
94.4440
1
594
1
chr5D.!!$R1
593
7
TraesCS3D01G406200
chr5D
74135738
74136335
597
False
791.0
791
90.6670
1
594
1
chr5D.!!$F1
593
8
TraesCS3D01G406200
chr3A
655504801
655507394
2593
True
580.5
870
81.5175
936
1832
2
chr3A.!!$R2
896
9
TraesCS3D01G406200
chr3A
655231713
655232546
833
True
549.0
549
78.9650
953
1835
1
chr3A.!!$R1
882
10
TraesCS3D01G406200
chr7A
48070460
48071023
563
False
824.0
824
93.1100
1
563
1
chr7A.!!$F1
562
11
TraesCS3D01G406200
chr6A
149386620
149387214
594
False
821.0
821
91.6390
1
594
1
chr6A.!!$F1
593
12
TraesCS3D01G406200
chr1D
54899993
54900590
597
False
808.0
808
91.1810
1
594
1
chr1D.!!$F1
593
13
TraesCS3D01G406200
chr1D
407807896
407808570
674
False
388.0
388
77.8270
1017
1667
1
chr1D.!!$F2
650
14
TraesCS3D01G406200
chr6D
350238058
350238652
594
True
804.0
804
91.1520
1
594
1
chr6D.!!$R2
593
15
TraesCS3D01G406200
chr7D
51796300
51796893
593
True
793.0
793
90.8180
1
594
1
chr7D.!!$R1
593
16
TraesCS3D01G406200
chr3B
684268274
684268912
638
True
455.0
455
79.6920
1017
1661
1
chr3B.!!$R2
644
17
TraesCS3D01G406200
chr3B
684327656
684328250
594
True
385.0
385
78.8180
978
1573
1
chr3B.!!$R3
595
18
TraesCS3D01G406200
chr3B
684460021
684462337
2316
True
329.0
558
88.0920
909
1661
2
chr3B.!!$R5
752
19
TraesCS3D01G406200
chr3B
684320517
684322246
1729
True
323.0
392
83.7700
1243
1832
2
chr3B.!!$R4
589
AutoCloner calculated primer pairs
These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3),
whilst remaining within the specified product range where possible.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
601
609
0.180406
CCAAAGGATCTACCCACCCG
59.82
60.0
0.0
0.0
40.05
5.28
F
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
2538
8233
0.248215
GCACGGAGAAAATGGCATCG
60.248
55.0
0.0
0.9
0.0
3.84
R
All possible primers
Listed here are all possible primers based on the multiple sequence alignment and SNPs generated
previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work
during PCR or sequencing,
these could be used as alternatives.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
87
88
2.110899
TGGATAGGCCCAAAAGGAACAA
59.889
45.455
0.00
0.00
38.24
2.83
249
250
2.844348
TCAAGGGGGAGAATGTTAGGTC
59.156
50.000
0.00
0.00
0.00
3.85
600
608
1.591768
TCCAAAGGATCTACCCACCC
58.408
55.000
0.00
0.00
40.05
4.61
601
609
0.180406
CCAAAGGATCTACCCACCCG
59.820
60.000
0.00
0.00
40.05
5.28
602
610
0.463833
CAAAGGATCTACCCACCCGC
60.464
60.000
0.00
0.00
40.05
6.13
603
611
1.968050
AAAGGATCTACCCACCCGCG
61.968
60.000
0.00
0.00
40.05
6.46
604
612
4.603946
GGATCTACCCACCCGCGC
62.604
72.222
0.00
0.00
0.00
6.86
605
613
4.944372
GATCTACCCACCCGCGCG
62.944
72.222
25.67
25.67
0.00
6.86
623
631
4.193334
CGAGATCGTGCCGGCAGA
62.193
66.667
33.73
27.95
34.11
4.26
624
632
2.279120
GAGATCGTGCCGGCAGAG
60.279
66.667
33.73
26.81
0.00
3.35
625
633
2.755876
AGATCGTGCCGGCAGAGA
60.756
61.111
33.73
31.11
0.00
3.10
626
634
2.279120
GATCGTGCCGGCAGAGAG
60.279
66.667
33.73
21.35
0.00
3.20
628
636
2.945398
GATCGTGCCGGCAGAGAGAC
62.945
65.000
33.73
23.46
0.00
3.36
629
637
4.803426
CGTGCCGGCAGAGAGACC
62.803
72.222
33.73
15.73
0.00
3.85
632
640
4.459089
GCCGGCAGAGAGACCACC
62.459
72.222
24.80
0.00
0.00
4.61
633
641
4.135153
CCGGCAGAGAGACCACCG
62.135
72.222
0.00
0.00
43.44
4.94
636
644
2.716017
GGCAGAGAGACCACCGGAG
61.716
68.421
9.46
0.00
0.00
4.63
637
645
1.679305
GCAGAGAGACCACCGGAGA
60.679
63.158
9.46
0.00
0.00
3.71
638
646
1.662438
GCAGAGAGACCACCGGAGAG
61.662
65.000
9.46
0.00
0.00
3.20
640
648
2.363147
AGAGACCACCGGAGAGGC
60.363
66.667
9.46
0.00
46.52
4.70
641
649
2.363147
GAGACCACCGGAGAGGCT
60.363
66.667
9.46
2.53
46.52
4.58
643
651
2.997897
GACCACCGGAGAGGCTGT
60.998
66.667
9.46
0.00
46.52
4.40
644
652
2.997897
ACCACCGGAGAGGCTGTC
60.998
66.667
9.46
2.44
46.52
3.51
645
653
4.135153
CCACCGGAGAGGCTGTCG
62.135
72.222
9.46
1.38
46.52
4.35
646
654
4.803426
CACCGGAGAGGCTGTCGC
62.803
72.222
9.46
0.00
46.52
5.19
692
700
3.496160
CAGGGGCTGGATCTGGGG
61.496
72.222
0.00
0.00
0.00
4.96
693
701
4.851252
AGGGGCTGGATCTGGGGG
62.851
72.222
0.00
0.00
0.00
5.40
716
724
4.410400
GCGGAGGGGGAAGGTGTG
62.410
72.222
0.00
0.00
0.00
3.82
717
725
3.717294
CGGAGGGGGAAGGTGTGG
61.717
72.222
0.00
0.00
0.00
4.17
720
728
3.882670
AGGGGGAAGGTGTGGGGA
61.883
66.667
0.00
0.00
0.00
4.81
721
729
3.339093
GGGGGAAGGTGTGGGGAG
61.339
72.222
0.00
0.00
0.00
4.30
723
731
1.619669
GGGGAAGGTGTGGGGAGAT
60.620
63.158
0.00
0.00
0.00
2.75
724
732
1.609783
GGGAAGGTGTGGGGAGATG
59.390
63.158
0.00
0.00
0.00
2.90
725
733
1.609783
GGAAGGTGTGGGGAGATGG
59.390
63.158
0.00
0.00
0.00
3.51
726
734
1.609783
GAAGGTGTGGGGAGATGGG
59.390
63.158
0.00
0.00
0.00
4.00
727
735
1.926426
GAAGGTGTGGGGAGATGGGG
61.926
65.000
0.00
0.00
0.00
4.96
728
736
2.286121
GGTGTGGGGAGATGGGGA
60.286
66.667
0.00
0.00
0.00
4.81
729
737
1.928567
GGTGTGGGGAGATGGGGAA
60.929
63.158
0.00
0.00
0.00
3.97
730
738
1.609783
GTGTGGGGAGATGGGGAAG
59.390
63.158
0.00
0.00
0.00
3.46
731
739
0.914417
GTGTGGGGAGATGGGGAAGA
60.914
60.000
0.00
0.00
0.00
2.87
733
741
0.326618
GTGGGGAGATGGGGAAGAGA
60.327
60.000
0.00
0.00
0.00
3.10
735
743
1.203557
TGGGGAGATGGGGAAGAGAAA
60.204
52.381
0.00
0.00
0.00
2.52
736
744
1.923148
GGGGAGATGGGGAAGAGAAAA
59.077
52.381
0.00
0.00
0.00
2.29
737
745
2.311841
GGGGAGATGGGGAAGAGAAAAA
59.688
50.000
0.00
0.00
0.00
1.94
738
746
3.357203
GGGAGATGGGGAAGAGAAAAAC
58.643
50.000
0.00
0.00
0.00
2.43
740
748
4.013050
GGAGATGGGGAAGAGAAAAACAG
58.987
47.826
0.00
0.00
0.00
3.16
741
749
3.425659
AGATGGGGAAGAGAAAAACAGC
58.574
45.455
0.00
0.00
0.00
4.40
742
750
1.995376
TGGGGAAGAGAAAAACAGCC
58.005
50.000
0.00
0.00
0.00
4.85
743
751
1.499007
TGGGGAAGAGAAAAACAGCCT
59.501
47.619
0.00
0.00
0.00
4.58
744
752
2.163509
GGGGAAGAGAAAAACAGCCTC
58.836
52.381
0.00
0.00
0.00
4.70
745
753
1.807142
GGGAAGAGAAAAACAGCCTCG
59.193
52.381
0.00
0.00
32.52
4.63
746
754
1.197949
GGAAGAGAAAAACAGCCTCGC
59.802
52.381
0.00
0.00
32.52
5.03
747
755
1.197949
GAAGAGAAAAACAGCCTCGCC
59.802
52.381
0.00
0.00
32.52
5.54
748
756
0.951040
AGAGAAAAACAGCCTCGCCG
60.951
55.000
0.00
0.00
32.52
6.46
749
757
2.126850
GAAAAACAGCCTCGCCGC
60.127
61.111
0.00
0.00
0.00
6.53
750
758
3.610791
GAAAAACAGCCTCGCCGCC
62.611
63.158
0.00
0.00
0.00
6.13
861
869
3.787001
GGCCAGAGTTCCCCCGAG
61.787
72.222
0.00
0.00
0.00
4.63
862
870
3.003763
GCCAGAGTTCCCCCGAGT
61.004
66.667
0.00
0.00
0.00
4.18
864
872
2.711922
CCAGAGTTCCCCCGAGTCG
61.712
68.421
5.29
5.29
0.00
4.18
865
873
3.069318
AGAGTTCCCCCGAGTCGC
61.069
66.667
7.12
0.00
0.00
5.19
866
874
4.144703
GAGTTCCCCCGAGTCGCC
62.145
72.222
7.12
0.00
0.00
5.54
906
914
4.078516
GGGACGGGGGAGAACACG
62.079
72.222
0.00
0.00
0.00
4.49
907
915
4.078516
GGACGGGGGAGAACACGG
62.079
72.222
0.00
0.00
0.00
4.94
1012
1036
6.202954
CAGTTCTACGGTCAAATCAAGAGTTT
59.797
38.462
0.00
0.00
0.00
2.66
1132
1156
1.573829
TTTTCATCGACCAGGTGCGC
61.574
55.000
0.00
0.00
0.00
6.09
1160
1184
2.969238
GCATGGGCTCCATCGTCG
60.969
66.667
3.93
0.00
43.15
5.12
1161
1185
2.969238
CATGGGCTCCATCGTCGC
60.969
66.667
3.93
0.00
43.15
5.19
1167
1191
2.224885
GCTCCATCGTCGCGTTCTC
61.225
63.158
5.77
0.00
0.00
2.87
1180
1204
2.248487
GCGTTCTCGTTCGTACTCATT
58.752
47.619
0.00
0.00
39.49
2.57
1181
1205
3.419915
GCGTTCTCGTTCGTACTCATTA
58.580
45.455
0.00
0.00
39.49
1.90
1196
1220
4.104086
ACTCATTATCTGGGTCACCTTCA
58.896
43.478
0.00
0.00
30.59
3.02
1197
1221
4.723789
ACTCATTATCTGGGTCACCTTCAT
59.276
41.667
0.00
0.00
30.59
2.57
1198
1222
5.163258
ACTCATTATCTGGGTCACCTTCATC
60.163
44.000
0.00
0.00
30.59
2.92
1200
1224
0.179000
ATCTGGGTCACCTTCATCGC
59.821
55.000
0.00
0.00
37.76
4.58
1201
1225
1.450312
CTGGGTCACCTTCATCGCC
60.450
63.158
0.00
0.00
37.76
5.54
1202
1226
2.511600
GGGTCACCTTCATCGCCG
60.512
66.667
0.00
0.00
0.00
6.46
1203
1227
2.511600
GGTCACCTTCATCGCCGG
60.512
66.667
0.00
0.00
0.00
6.13
1204
1228
2.264794
GTCACCTTCATCGCCGGT
59.735
61.111
1.90
0.00
0.00
5.28
1206
1230
3.499737
CACCTTCATCGCCGGTGC
61.500
66.667
11.05
0.00
41.39
5.01
1228
1252
1.206072
CACGCTCTTGTGCTGCTTC
59.794
57.895
0.00
0.00
32.31
3.86
1229
1253
1.227645
ACGCTCTTGTGCTGCTTCA
60.228
52.632
0.00
0.00
0.00
3.02
1231
1255
1.578423
GCTCTTGTGCTGCTTCACC
59.422
57.895
0.00
0.00
36.17
4.02
1232
1256
1.864862
CTCTTGTGCTGCTTCACCG
59.135
57.895
0.00
0.00
36.17
4.94
1234
1258
0.880278
TCTTGTGCTGCTTCACCGTC
60.880
55.000
0.00
0.00
36.17
4.79
1235
1259
0.882042
CTTGTGCTGCTTCACCGTCT
60.882
55.000
0.00
0.00
36.17
4.18
1236
1260
0.880278
TTGTGCTGCTTCACCGTCTC
60.880
55.000
0.00
0.00
36.17
3.36
1238
1262
3.482783
GCTGCTTCACCGTCTCGC
61.483
66.667
0.00
0.00
0.00
5.03
1239
1263
2.259818
CTGCTTCACCGTCTCGCT
59.740
61.111
0.00
0.00
0.00
4.93
1240
1264
2.049156
TGCTTCACCGTCTCGCTG
60.049
61.111
0.00
0.00
0.00
5.18
1242
1266
2.811317
CTTCACCGTCTCGCTGCC
60.811
66.667
0.00
0.00
0.00
4.85
1314
1402
0.456995
CGACTTCTCTGCCTTCCGTC
60.457
60.000
0.00
0.00
0.00
4.79
1316
1404
1.153745
CTTCTCTGCCTTCCGTCCG
60.154
63.158
0.00
0.00
0.00
4.79
1322
1413
3.766691
GCCTTCCGTCCGGTGCTA
61.767
66.667
0.00
0.00
36.47
3.49
1537
5368
1.846124
GGTGGAGAAGGGGGACACA
60.846
63.158
0.00
0.00
33.91
3.72
1574
5405
1.151221
TGCCTGCACATGTTCCACT
59.849
52.632
0.00
0.00
0.00
4.00
1692
6124
5.994054
GCTGGTAATGAGAGATAATTGAGCA
59.006
40.000
0.00
0.00
0.00
4.26
1832
6296
5.394115
GGATATCACAACAATCCAAACCCAC
60.394
44.000
4.83
0.00
39.24
4.61
1842
6796
5.010617
ACAATCCAAACCCACACATTAAGTC
59.989
40.000
0.00
0.00
0.00
3.01
1880
6834
4.050852
AGTTGAGCAAAAGGAAGCAAAG
57.949
40.909
0.00
0.00
0.00
2.77
1897
7094
2.373540
AAGCTTACGGTATCGCACAA
57.626
45.000
0.00
0.00
40.63
3.33
1898
7095
1.636988
AGCTTACGGTATCGCACAAC
58.363
50.000
0.00
0.00
40.63
3.32
1899
7096
1.067425
AGCTTACGGTATCGCACAACA
60.067
47.619
0.00
0.00
40.63
3.33
1900
7097
1.931172
GCTTACGGTATCGCACAACAT
59.069
47.619
0.00
0.00
40.63
2.71
1905
7102
2.159099
ACGGTATCGCACAACATCTCAT
60.159
45.455
0.00
0.00
40.63
2.90
1912
7109
2.744166
CGCACAACATCTCATCCTCCAT
60.744
50.000
0.00
0.00
0.00
3.41
1977
7178
6.256321
GCGTTTGAAAATAATCTCAATGGCAT
59.744
34.615
0.00
0.00
33.63
4.40
1993
7194
0.387239
GCATTTGACCGAACACCTGC
60.387
55.000
0.00
0.00
0.00
4.85
2010
7211
1.216178
GCCAGGCGTCGGTACTAAA
59.784
57.895
0.00
0.00
0.00
1.85
2011
7212
0.390209
GCCAGGCGTCGGTACTAAAA
60.390
55.000
0.00
0.00
0.00
1.52
2068
7269
0.686441
TCCGTGGCCTGTGCTACTAT
60.686
55.000
3.32
0.00
45.94
2.12
2083
7284
1.454479
CTATTGTGGCCAGCCCCAG
60.454
63.158
5.11
0.00
35.05
4.45
2084
7285
2.916527
CTATTGTGGCCAGCCCCAGG
62.917
65.000
5.11
0.00
35.05
4.45
2099
7300
2.368329
AGGGGACATAGTGGGGGC
60.368
66.667
0.00
0.00
0.00
5.80
2146
7347
1.733758
CCACGCCGCAACTAACGTA
60.734
57.895
0.00
0.00
36.91
3.57
2218
7480
2.654749
TGCTTGCTATATCGCGCTAT
57.345
45.000
5.56
7.70
0.00
2.97
2286
7548
6.497259
TCACCCTATTATACTTGCTCTTAGGG
59.503
42.308
9.96
9.96
46.50
3.53
2326
7588
5.062183
GTGGAATTTGAAGCGAAAAATAGCC
59.938
40.000
0.00
0.00
0.00
3.93
2380
8075
4.020617
TGGAGGAAGCAGCGGTGG
62.021
66.667
17.54
0.00
0.00
4.61
2406
8101
3.930012
GATAGGCGGGGAAGCGCT
61.930
66.667
2.64
2.64
38.18
5.92
2443
8138
1.841302
AATGGAGAAGGTGCAGGCGA
61.841
55.000
0.00
0.00
0.00
5.54
2471
8166
1.440893
CGCCTGGAGGTCTCTCATG
59.559
63.158
0.00
0.00
41.69
3.07
2478
8173
1.606668
GGAGGTCTCTCATGTCTAGCG
59.393
57.143
0.00
0.00
41.69
4.26
2484
8179
0.175760
TCTCATGTCTAGCGGTTGGC
59.824
55.000
0.00
0.00
44.05
4.52
2501
8196
4.059459
CGAAGTTGCGCGCGAGTT
62.059
61.111
35.43
35.43
0.00
3.01
2536
8231
1.511887
CGCAGCAAATACACCACGC
60.512
57.895
0.00
0.00
0.00
5.34
2537
8232
1.578926
GCAGCAAATACACCACGCA
59.421
52.632
0.00
0.00
0.00
5.24
2538
8233
0.729140
GCAGCAAATACACCACGCAC
60.729
55.000
0.00
0.00
0.00
5.34
2539
8234
0.452618
CAGCAAATACACCACGCACG
60.453
55.000
0.00
0.00
0.00
5.34
2540
8235
0.601576
AGCAAATACACCACGCACGA
60.602
50.000
0.00
0.00
0.00
4.35
2541
8236
0.446222
GCAAATACACCACGCACGAT
59.554
50.000
0.00
0.00
0.00
3.73
2542
8237
1.790123
GCAAATACACCACGCACGATG
60.790
52.381
0.00
0.00
0.00
3.84
2543
8238
0.446222
AAATACACCACGCACGATGC
59.554
50.000
0.00
0.00
40.69
3.91
2544
8239
1.366111
AATACACCACGCACGATGCC
61.366
55.000
0.00
0.00
41.12
4.40
2545
8240
2.514510
ATACACCACGCACGATGCCA
62.515
55.000
0.00
0.00
41.12
4.92
2553
8248
0.248215
CGCACGATGCCATTTTCTCC
60.248
55.000
0.00
0.00
41.12
3.71
2555
8250
1.086696
CACGATGCCATTTTCTCCGT
58.913
50.000
0.00
0.00
0.00
4.69
2557
8252
0.248215
CGATGCCATTTTCTCCGTGC
60.248
55.000
0.00
0.00
0.00
5.34
2564
8259
1.131126
CATTTTCTCCGTGCGCTGAAT
59.869
47.619
9.73
0.00
0.00
2.57
2573
8268
3.376859
TCCGTGCGCTGAATCAATTTTAT
59.623
39.130
9.73
0.00
0.00
1.40
2575
8270
4.341935
CGTGCGCTGAATCAATTTTATCA
58.658
39.130
9.73
0.00
0.00
2.15
2580
8275
5.559227
CGCTGAATCAATTTTATCACACGA
58.441
37.500
0.00
0.00
0.00
4.35
2583
8278
6.493449
TGAATCAATTTTATCACACGAGCA
57.507
33.333
0.00
0.00
0.00
4.26
2591
8286
9.075519
CAATTTTATCACACGAGCAATTATTGT
57.924
29.630
6.81
0.00
0.00
2.71
2599
8294
1.029408
AGCAATTATTGTGCGCCCGA
61.029
50.000
4.18
0.00
46.86
5.14
2667
8362
0.106708
CCTGCGGCTTATTCCTAGCA
59.893
55.000
0.00
0.00
40.42
3.49
2670
8365
0.106894
GCGGCTTATTCCTAGCACCT
59.893
55.000
0.00
0.00
40.42
4.00
2675
8370
3.370527
GGCTTATTCCTAGCACCTGTTGA
60.371
47.826
0.00
0.00
40.42
3.18
2681
8376
2.906389
TCCTAGCACCTGTTGAAGATGT
59.094
45.455
0.00
0.00
0.00
3.06
2688
8383
4.757149
GCACCTGTTGAAGATGTTCTTAGT
59.243
41.667
4.03
0.00
36.73
2.24
2700
8395
7.208064
AGATGTTCTTAGTGGGCCTAATAAA
57.792
36.000
10.35
0.00
35.14
1.40
2701
8396
7.639378
AGATGTTCTTAGTGGGCCTAATAAAA
58.361
34.615
10.35
5.41
35.14
1.52
2702
8397
8.113462
AGATGTTCTTAGTGGGCCTAATAAAAA
58.887
33.333
10.35
0.52
35.14
1.94
2703
8398
7.696992
TGTTCTTAGTGGGCCTAATAAAAAG
57.303
36.000
10.35
1.02
35.14
2.27
2704
8399
6.661805
TGTTCTTAGTGGGCCTAATAAAAAGG
59.338
38.462
10.35
0.00
35.14
3.11
2705
8400
6.645884
TCTTAGTGGGCCTAATAAAAAGGA
57.354
37.500
10.35
1.61
35.14
3.36
2706
8401
6.420638
TCTTAGTGGGCCTAATAAAAAGGAC
58.579
40.000
10.35
0.00
41.95
3.85
2707
8402
3.617284
AGTGGGCCTAATAAAAAGGACG
58.383
45.455
4.53
0.00
43.83
4.79
2708
8403
3.264964
AGTGGGCCTAATAAAAAGGACGA
59.735
43.478
4.53
0.00
43.83
4.20
2709
8404
3.626217
GTGGGCCTAATAAAAAGGACGAG
59.374
47.826
4.53
0.00
43.83
4.18
2710
8405
3.211865
GGGCCTAATAAAAAGGACGAGG
58.788
50.000
0.84
0.00
43.83
4.63
2711
8406
2.617308
GGCCTAATAAAAAGGACGAGGC
59.383
50.000
0.00
1.30
45.90
4.70
2712
8407
3.542648
GCCTAATAAAAAGGACGAGGCT
58.457
45.455
2.77
0.00
43.77
4.58
2713
8408
3.560481
GCCTAATAAAAAGGACGAGGCTC
59.440
47.826
3.87
3.87
43.77
4.70
2714
8409
4.766375
CCTAATAAAAAGGACGAGGCTCA
58.234
43.478
15.95
0.00
36.08
4.26
2715
8410
4.571176
CCTAATAAAAAGGACGAGGCTCAC
59.429
45.833
15.95
7.70
36.08
3.51
2716
8411
2.074547
TAAAAAGGACGAGGCTCACG
57.925
50.000
15.95
4.52
0.00
4.35
2717
8412
0.106149
AAAAAGGACGAGGCTCACGT
59.894
50.000
15.95
8.27
46.58
4.49
2722
8417
2.915659
ACGAGGCTCACGTCCCAA
60.916
61.111
15.95
0.00
39.87
4.12
2723
8418
2.283529
ACGAGGCTCACGTCCCAAT
61.284
57.895
15.95
0.00
39.87
3.16
2724
8419
0.968901
ACGAGGCTCACGTCCCAATA
60.969
55.000
15.95
0.00
39.87
1.90
2725
8420
0.174845
CGAGGCTCACGTCCCAATAA
59.825
55.000
15.95
0.00
0.00
1.40
2726
8421
1.404986
CGAGGCTCACGTCCCAATAAA
60.405
52.381
15.95
0.00
0.00
1.40
2727
8422
2.007608
GAGGCTCACGTCCCAATAAAC
58.992
52.381
10.25
0.00
0.00
2.01
2728
8423
1.092348
GGCTCACGTCCCAATAAACC
58.908
55.000
0.00
0.00
0.00
3.27
2729
8424
1.092348
GCTCACGTCCCAATAAACCC
58.908
55.000
0.00
0.00
0.00
4.11
2730
8425
1.365699
CTCACGTCCCAATAAACCCG
58.634
55.000
0.00
0.00
0.00
5.28
2731
8426
0.036199
TCACGTCCCAATAAACCCGG
60.036
55.000
0.00
0.00
0.00
5.73
2732
8427
0.036199
CACGTCCCAATAAACCCGGA
60.036
55.000
0.73
0.00
0.00
5.14
2733
8428
0.036105
ACGTCCCAATAAACCCGGAC
60.036
55.000
0.73
0.00
41.20
4.79
2734
8429
0.036199
CGTCCCAATAAACCCGGACA
60.036
55.000
0.73
0.00
44.20
4.02
2735
8430
1.746470
GTCCCAATAAACCCGGACAG
58.254
55.000
0.73
0.00
43.58
3.51
2736
8431
1.279846
GTCCCAATAAACCCGGACAGA
59.720
52.381
0.73
0.00
43.58
3.41
2737
8432
1.986631
TCCCAATAAACCCGGACAGAA
59.013
47.619
0.73
0.00
0.00
3.02
2738
8433
2.026636
TCCCAATAAACCCGGACAGAAG
60.027
50.000
0.73
0.00
0.00
2.85
2739
8434
2.365582
CCAATAAACCCGGACAGAAGG
58.634
52.381
0.73
0.00
0.00
3.46
2740
8435
2.026636
CCAATAAACCCGGACAGAAGGA
60.027
50.000
0.73
0.00
0.00
3.36
2741
8436
3.270877
CAATAAACCCGGACAGAAGGAG
58.729
50.000
0.73
0.00
0.00
3.69
2742
8437
2.019807
TAAACCCGGACAGAAGGAGT
57.980
50.000
0.73
0.00
0.00
3.85
2746
8441
0.684805
CCCGGACAGAAGGAGTAGCT
60.685
60.000
0.73
0.00
0.00
3.32
2748
8443
0.457851
CGGACAGAAGGAGTAGCTGG
59.542
60.000
0.00
0.00
34.05
4.85
2749
8444
0.176910
GGACAGAAGGAGTAGCTGGC
59.823
60.000
0.00
0.00
36.94
4.85
2750
8445
1.190643
GACAGAAGGAGTAGCTGGCT
58.809
55.000
0.00
0.00
34.83
4.75
2752
8447
2.360801
GACAGAAGGAGTAGCTGGCTAG
59.639
54.545
0.00
0.00
34.83
3.42
2753
8448
2.291930
ACAGAAGGAGTAGCTGGCTAGT
60.292
50.000
9.40
9.40
35.12
2.57
2754
8449
2.360801
CAGAAGGAGTAGCTGGCTAGTC
59.639
54.545
22.28
22.28
44.23
2.59
2757
8452
0.382515
GGAGTAGCTGGCTAGTCACG
59.617
60.000
27.84
0.00
45.82
4.35
2758
8453
0.248702
GAGTAGCTGGCTAGTCACGC
60.249
60.000
24.27
9.82
44.32
5.34
2762
8457
3.181967
CTGGCTAGTCACGCGTGC
61.182
66.667
33.63
26.51
0.00
5.34
2763
8458
3.914605
CTGGCTAGTCACGCGTGCA
62.915
63.158
33.63
22.30
0.00
4.57
2770
8465
3.049074
TCACGCGTGCATGCATGT
61.049
55.556
34.08
24.49
35.52
3.21
2774
8469
4.423022
GCGTGCATGCATGTGCCA
62.423
61.111
34.08
14.30
44.43
4.92
2779
8474
1.104577
TGCATGCATGTGCCATCGAT
61.105
50.000
26.79
0.00
44.43
3.59
2781
8476
0.663269
CATGCATGTGCCATCGATGC
60.663
55.000
20.25
15.19
42.38
3.91
2782
8477
3.112842
GCATGTGCCATCGATGCA
58.887
55.556
20.25
17.52
41.78
3.96
2783
8478
1.104577
TGCATGTGCCATCGATGCAT
61.105
50.000
20.25
14.55
45.76
3.96
2784
8479
0.663269
GCATGTGCCATCGATGCATG
60.663
55.000
26.93
26.93
41.78
4.06
2785
8480
0.948678
CATGTGCCATCGATGCATGA
59.051
50.000
27.10
16.87
41.46
3.07
2786
8481
1.335496
CATGTGCCATCGATGCATGAA
59.665
47.619
27.10
16.19
41.46
2.57
2789
8484
2.212652
GTGCCATCGATGCATGAAGTA
58.787
47.619
20.25
1.84
41.46
2.24
2790
8485
2.810274
GTGCCATCGATGCATGAAGTAT
59.190
45.455
20.25
0.00
41.46
2.12
2791
8486
3.996363
GTGCCATCGATGCATGAAGTATA
59.004
43.478
20.25
0.00
41.46
1.47
2792
8487
4.452114
GTGCCATCGATGCATGAAGTATAA
59.548
41.667
20.25
0.00
41.46
0.98
2793
8488
5.122869
GTGCCATCGATGCATGAAGTATAAT
59.877
40.000
20.25
0.00
41.46
1.28
2794
8489
6.313658
GTGCCATCGATGCATGAAGTATAATA
59.686
38.462
20.25
0.00
41.46
0.98
2796
8491
7.553760
TGCCATCGATGCATGAAGTATAATATT
59.446
33.333
20.25
0.00
32.85
1.28
2825
8520
8.918202
TTCTTGTGTCAGTTTCCTATACATTT
57.082
30.769
0.00
0.00
0.00
2.32
2826
8521
8.918202
TCTTGTGTCAGTTTCCTATACATTTT
57.082
30.769
0.00
0.00
0.00
1.82
2829
8524
9.787435
TTGTGTCAGTTTCCTATACATTTTAGT
57.213
29.630
0.00
0.00
0.00
2.24
2830
8525
9.431887
TGTGTCAGTTTCCTATACATTTTAGTC
57.568
33.333
0.00
0.00
0.00
2.59
2831
8526
9.654663
GTGTCAGTTTCCTATACATTTTAGTCT
57.345
33.333
0.00
0.00
0.00
3.24
2846
8541
9.686683
ACATTTTAGTCTAATCTTTGTAGGCAT
57.313
29.630
0.00
0.00
0.00
4.40
2869
8564
5.717078
ATATGCCCATGCTAATTTGTGAG
57.283
39.130
0.00
0.00
38.71
3.51
2870
8565
3.084536
TGCCCATGCTAATTTGTGAGA
57.915
42.857
0.00
0.00
38.71
3.27
2871
8566
3.634504
TGCCCATGCTAATTTGTGAGAT
58.365
40.909
0.00
0.00
38.71
2.75
2873
8568
3.382546
GCCCATGCTAATTTGTGAGATGT
59.617
43.478
0.00
0.00
33.53
3.06
2874
8569
4.580167
GCCCATGCTAATTTGTGAGATGTA
59.420
41.667
0.00
0.00
33.53
2.29
2875
8570
5.242393
GCCCATGCTAATTTGTGAGATGTAT
59.758
40.000
0.00
0.00
33.53
2.29
2876
8571
6.430925
GCCCATGCTAATTTGTGAGATGTATA
59.569
38.462
0.00
0.00
33.53
1.47
2878
8573
9.017509
CCCATGCTAATTTGTGAGATGTATAAT
57.982
33.333
0.00
0.00
0.00
1.28
2879
8574
9.836076
CCATGCTAATTTGTGAGATGTATAATG
57.164
33.333
0.00
0.00
0.00
1.90
2880
8575
9.836076
CATGCTAATTTGTGAGATGTATAATGG
57.164
33.333
0.00
0.00
0.00
3.16
2881
8576
9.797642
ATGCTAATTTGTGAGATGTATAATGGA
57.202
29.630
0.00
0.00
0.00
3.41
2882
8577
9.625747
TGCTAATTTGTGAGATGTATAATGGAA
57.374
29.630
0.00
0.00
0.00
3.53
2886
8581
8.682936
ATTTGTGAGATGTATAATGGAAGGAC
57.317
34.615
0.00
0.00
0.00
3.85
2887
8582
6.174720
TGTGAGATGTATAATGGAAGGACC
57.825
41.667
0.00
0.00
39.54
4.46
2895
8590
4.498346
TGGAAGGACCACGTACGA
57.502
55.556
24.41
0.00
44.64
3.43
2897
8592
1.213799
GGAAGGACCACGTACGACC
59.786
63.158
24.41
17.83
38.79
4.79
2898
8593
1.246737
GGAAGGACCACGTACGACCT
61.247
60.000
24.41
19.64
38.79
3.85
2899
8594
0.169894
GAAGGACCACGTACGACCTC
59.830
60.000
24.41
11.79
0.00
3.85
2900
8595
0.538057
AAGGACCACGTACGACCTCA
60.538
55.000
24.41
0.00
0.00
3.86
2901
8596
0.323178
AGGACCACGTACGACCTCAT
60.323
55.000
24.41
7.20
0.00
2.90
2903
8598
1.093159
GACCACGTACGACCTCATCT
58.907
55.000
24.41
0.00
0.00
2.90
2906
8601
1.269166
CACGTACGACCTCATCTTGC
58.731
55.000
24.41
0.00
0.00
4.01
2907
8602
0.179171
ACGTACGACCTCATCTTGCG
60.179
55.000
24.41
0.00
39.97
4.85
2908
8603
0.098200
CGTACGACCTCATCTTGCGA
59.902
55.000
10.44
0.00
36.92
5.10
2909
8604
1.546834
GTACGACCTCATCTTGCGAC
58.453
55.000
0.00
0.00
0.00
5.19
2910
8605
0.098200
TACGACCTCATCTTGCGACG
59.902
55.000
0.00
0.00
0.00
5.12
2913
8608
0.109272
GACCTCATCTTGCGACGACA
60.109
55.000
0.00
0.00
0.00
4.35
2916
8611
1.418373
CTCATCTTGCGACGACAACA
58.582
50.000
0.00
0.00
0.00
3.33
2917
8612
1.792367
CTCATCTTGCGACGACAACAA
59.208
47.619
0.00
0.00
0.00
2.83
2919
8614
1.526887
CATCTTGCGACGACAACAACT
59.473
47.619
0.00
0.00
0.00
3.16
2920
8615
1.647346
TCTTGCGACGACAACAACTT
58.353
45.000
0.00
0.00
0.00
2.66
2921
8616
1.326245
TCTTGCGACGACAACAACTTG
59.674
47.619
0.00
0.00
0.00
3.16
2922
8617
1.326245
CTTGCGACGACAACAACTTGA
59.674
47.619
0.00
0.00
0.00
3.02
2923
8618
0.927537
TGCGACGACAACAACTTGAG
59.072
50.000
0.00
0.00
0.00
3.02
2924
8619
0.232303
GCGACGACAACAACTTGAGG
59.768
55.000
0.00
0.00
0.00
3.86
2925
8620
1.567504
CGACGACAACAACTTGAGGT
58.432
50.000
0.00
0.00
0.00
3.85
2926
8621
2.734670
CGACGACAACAACTTGAGGTA
58.265
47.619
0.00
0.00
0.00
3.08
2927
8622
2.724690
CGACGACAACAACTTGAGGTAG
59.275
50.000
0.00
0.00
0.00
3.18
2928
8623
3.057734
GACGACAACAACTTGAGGTAGG
58.942
50.000
0.00
0.00
0.00
3.18
2929
8624
2.224209
ACGACAACAACTTGAGGTAGGG
60.224
50.000
0.00
0.00
0.00
3.53
2930
8625
2.036733
CGACAACAACTTGAGGTAGGGA
59.963
50.000
0.00
0.00
0.00
4.20
2931
8626
3.306780
CGACAACAACTTGAGGTAGGGAT
60.307
47.826
0.00
0.00
0.00
3.85
2932
8627
4.254492
GACAACAACTTGAGGTAGGGATC
58.746
47.826
0.00
0.00
0.00
3.36
2933
8628
3.910627
ACAACAACTTGAGGTAGGGATCT
59.089
43.478
0.00
0.00
0.00
2.75
2934
8629
4.351111
ACAACAACTTGAGGTAGGGATCTT
59.649
41.667
0.00
0.00
0.00
2.40
2935
8630
4.559862
ACAACTTGAGGTAGGGATCTTG
57.440
45.455
0.00
0.00
0.00
3.02
2936
8631
4.168101
ACAACTTGAGGTAGGGATCTTGA
58.832
43.478
0.00
0.00
0.00
3.02
2937
8632
4.785376
ACAACTTGAGGTAGGGATCTTGAT
59.215
41.667
0.00
0.00
0.00
2.57
2938
8633
5.104735
ACAACTTGAGGTAGGGATCTTGATC
60.105
44.000
2.21
2.21
0.00
2.92
2939
8634
4.624913
ACTTGAGGTAGGGATCTTGATCA
58.375
43.478
12.02
0.00
0.00
2.92
2940
8635
5.222870
ACTTGAGGTAGGGATCTTGATCAT
58.777
41.667
12.02
3.57
0.00
2.45
2941
8636
5.071519
ACTTGAGGTAGGGATCTTGATCATG
59.928
44.000
12.02
0.00
0.00
3.07
2942
8637
3.326006
TGAGGTAGGGATCTTGATCATGC
59.674
47.826
12.02
4.40
0.00
4.06
2943
8638
3.321039
AGGTAGGGATCTTGATCATGCA
58.679
45.455
12.02
0.00
0.00
3.96
2944
8639
3.915073
AGGTAGGGATCTTGATCATGCAT
59.085
43.478
12.02
0.00
0.00
3.96
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
288
292
2.356793
GATCAGGGCGCGGATCTG
60.357
66.667
28.34
16.26
37.52
2.90
455
461
2.430367
GGCGGTGGTGGAACTTCT
59.570
61.111
0.00
0.00
36.74
2.85
614
622
3.695606
GTGGTCTCTCTGCCGGCA
61.696
66.667
30.59
30.59
0.00
5.69
615
623
4.459089
GGTGGTCTCTCTGCCGGC
62.459
72.222
22.73
22.73
0.00
6.13
616
624
4.135153
CGGTGGTCTCTCTGCCGG
62.135
72.222
0.00
0.00
38.86
6.13
618
626
2.680352
TCCGGTGGTCTCTCTGCC
60.680
66.667
0.00
0.00
0.00
4.85
620
628
1.034838
CCTCTCCGGTGGTCTCTCTG
61.035
65.000
0.00
0.00
0.00
3.35
621
629
1.304952
CCTCTCCGGTGGTCTCTCT
59.695
63.158
0.00
0.00
0.00
3.10
623
631
2.363147
GCCTCTCCGGTGGTCTCT
60.363
66.667
0.00
0.00
34.25
3.10
624
632
2.363147
AGCCTCTCCGGTGGTCTC
60.363
66.667
0.00
0.00
34.25
3.36
625
633
2.681778
CAGCCTCTCCGGTGGTCT
60.682
66.667
0.00
2.15
34.25
3.85
626
634
2.997897
ACAGCCTCTCCGGTGGTC
60.998
66.667
0.00
0.00
34.25
4.02
628
636
4.135153
CGACAGCCTCTCCGGTGG
62.135
72.222
0.00
3.77
34.25
4.61
629
637
4.803426
GCGACAGCCTCTCCGGTG
62.803
72.222
0.00
0.00
37.42
4.94
675
683
3.496160
CCCCAGATCCAGCCCCTG
61.496
72.222
0.00
0.00
0.00
4.45
676
684
4.851252
CCCCCAGATCCAGCCCCT
62.851
72.222
0.00
0.00
0.00
4.79
699
707
4.410400
CACACCTTCCCCCTCCGC
62.410
72.222
0.00
0.00
0.00
5.54
700
708
3.717294
CCACACCTTCCCCCTCCG
61.717
72.222
0.00
0.00
0.00
4.63
701
709
3.339093
CCCACACCTTCCCCCTCC
61.339
72.222
0.00
0.00
0.00
4.30
702
710
3.339093
CCCCACACCTTCCCCCTC
61.339
72.222
0.00
0.00
0.00
4.30
703
711
3.882670
TCCCCACACCTTCCCCCT
61.883
66.667
0.00
0.00
0.00
4.79
704
712
3.339093
CTCCCCACACCTTCCCCC
61.339
72.222
0.00
0.00
0.00
5.40
705
713
1.619669
ATCTCCCCACACCTTCCCC
60.620
63.158
0.00
0.00
0.00
4.81
706
714
1.609783
CATCTCCCCACACCTTCCC
59.390
63.158
0.00
0.00
0.00
3.97
708
716
1.609783
CCCATCTCCCCACACCTTC
59.390
63.158
0.00
0.00
0.00
3.46
709
717
1.930656
CCCCATCTCCCCACACCTT
60.931
63.158
0.00
0.00
0.00
3.50
710
718
2.286425
CCCCATCTCCCCACACCT
60.286
66.667
0.00
0.00
0.00
4.00
711
719
1.926426
CTTCCCCATCTCCCCACACC
61.926
65.000
0.00
0.00
0.00
4.16
712
720
0.914417
TCTTCCCCATCTCCCCACAC
60.914
60.000
0.00
0.00
0.00
3.82
713
721
0.621571
CTCTTCCCCATCTCCCCACA
60.622
60.000
0.00
0.00
0.00
4.17
714
722
0.326618
TCTCTTCCCCATCTCCCCAC
60.327
60.000
0.00
0.00
0.00
4.61
716
724
1.596496
TTTCTCTTCCCCATCTCCCC
58.404
55.000
0.00
0.00
0.00
4.81
717
725
3.245264
TGTTTTTCTCTTCCCCATCTCCC
60.245
47.826
0.00
0.00
0.00
4.30
720
728
3.425659
GCTGTTTTTCTCTTCCCCATCT
58.574
45.455
0.00
0.00
0.00
2.90
721
729
2.493675
GGCTGTTTTTCTCTTCCCCATC
59.506
50.000
0.00
0.00
0.00
3.51
723
731
1.499007
AGGCTGTTTTTCTCTTCCCCA
59.501
47.619
0.00
0.00
0.00
4.96
724
732
2.163509
GAGGCTGTTTTTCTCTTCCCC
58.836
52.381
0.00
0.00
0.00
4.81
725
733
1.807142
CGAGGCTGTTTTTCTCTTCCC
59.193
52.381
0.00
0.00
0.00
3.97
726
734
1.197949
GCGAGGCTGTTTTTCTCTTCC
59.802
52.381
0.00
0.00
0.00
3.46
727
735
1.197949
GGCGAGGCTGTTTTTCTCTTC
59.802
52.381
0.00
0.00
0.00
2.87
728
736
1.239347
GGCGAGGCTGTTTTTCTCTT
58.761
50.000
0.00
0.00
0.00
2.85
729
737
0.951040
CGGCGAGGCTGTTTTTCTCT
60.951
55.000
0.00
0.00
0.00
3.10
730
738
1.497722
CGGCGAGGCTGTTTTTCTC
59.502
57.895
0.00
0.00
0.00
2.87
731
739
2.617274
GCGGCGAGGCTGTTTTTCT
61.617
57.895
12.98
0.00
37.24
2.52
733
741
3.670377
GGCGGCGAGGCTGTTTTT
61.670
61.111
12.98
0.00
42.90
1.94
844
852
3.787001
CTCGGGGGAACTCTGGCC
61.787
72.222
0.00
0.00
0.00
5.36
845
853
3.003763
ACTCGGGGGAACTCTGGC
61.004
66.667
0.00
0.00
0.00
4.85
846
854
2.711922
CGACTCGGGGGAACTCTGG
61.712
68.421
0.00
0.00
0.00
3.86
847
855
2.885861
CGACTCGGGGGAACTCTG
59.114
66.667
0.00
0.00
0.00
3.35
849
857
4.144703
GGCGACTCGGGGGAACTC
62.145
72.222
0.00
0.00
0.00
3.01
886
894
3.767806
GTTCTCCCCCGTCCCGTC
61.768
72.222
0.00
0.00
0.00
4.79
887
895
4.626402
TGTTCTCCCCCGTCCCGT
62.626
66.667
0.00
0.00
0.00
5.28
888
896
4.078516
GTGTTCTCCCCCGTCCCG
62.079
72.222
0.00
0.00
0.00
5.14
889
897
4.078516
CGTGTTCTCCCCCGTCCC
62.079
72.222
0.00
0.00
0.00
4.46
890
898
4.078516
CCGTGTTCTCCCCCGTCC
62.079
72.222
0.00
0.00
0.00
4.79
891
899
4.078516
CCCGTGTTCTCCCCCGTC
62.079
72.222
0.00
0.00
0.00
4.79
895
903
3.782443
ATCGCCCGTGTTCTCCCC
61.782
66.667
0.00
0.00
0.00
4.81
896
904
2.511600
CATCGCCCGTGTTCTCCC
60.512
66.667
0.00
0.00
0.00
4.30
898
906
0.108804
TCTTCATCGCCCGTGTTCTC
60.109
55.000
0.00
0.00
0.00
2.87
899
907
0.389948
GTCTTCATCGCCCGTGTTCT
60.390
55.000
0.00
0.00
0.00
3.01
900
908
0.389948
AGTCTTCATCGCCCGTGTTC
60.390
55.000
0.00
0.00
0.00
3.18
901
909
0.034896
AAGTCTTCATCGCCCGTGTT
59.965
50.000
0.00
0.00
0.00
3.32
902
910
0.389948
GAAGTCTTCATCGCCCGTGT
60.390
55.000
7.76
0.00
0.00
4.49
903
911
0.389817
TGAAGTCTTCATCGCCCGTG
60.390
55.000
11.36
0.00
34.08
4.94
904
912
0.389948
GTGAAGTCTTCATCGCCCGT
60.390
55.000
18.08
0.00
42.47
5.28
905
913
1.413767
CGTGAAGTCTTCATCGCCCG
61.414
60.000
18.08
12.38
42.47
6.13
906
914
0.108804
TCGTGAAGTCTTCATCGCCC
60.109
55.000
18.08
4.52
42.47
6.13
907
915
1.272781
CTCGTGAAGTCTTCATCGCC
58.727
55.000
18.08
4.88
42.47
5.54
1012
1036
2.364324
GGACATGGCCTCTCGTGTATTA
59.636
50.000
11.56
0.00
37.05
0.98
1143
1167
2.969238
CGACGATGGAGCCCATGC
60.969
66.667
10.99
3.49
45.26
4.06
1160
1184
1.892468
ATGAGTACGAACGAGAACGC
58.108
50.000
0.14
0.00
43.96
4.84
1161
1185
5.392874
CAGATAATGAGTACGAACGAGAACG
59.607
44.000
0.14
0.00
45.75
3.95
1167
1191
4.201980
TGACCCAGATAATGAGTACGAACG
60.202
45.833
0.00
0.00
0.00
3.95
1180
1204
1.412710
GCGATGAAGGTGACCCAGATA
59.587
52.381
0.00
0.00
0.00
1.98
1181
1205
0.179000
GCGATGAAGGTGACCCAGAT
59.821
55.000
0.00
0.00
0.00
2.90
1210
1234
1.206072
GAAGCAGCACAAGAGCGTG
59.794
57.895
0.00
0.00
40.15
5.34
1211
1235
1.227645
TGAAGCAGCACAAGAGCGT
60.228
52.632
0.00
0.00
40.15
5.07
1212
1236
1.206072
GTGAAGCAGCACAAGAGCG
59.794
57.895
0.00
0.00
38.63
5.03
1214
1238
0.882042
ACGGTGAAGCAGCACAAGAG
60.882
55.000
10.52
2.66
40.52
2.85
1217
1241
0.880278
GAGACGGTGAAGCAGCACAA
60.880
55.000
10.52
0.00
40.52
3.33
1219
1243
2.375766
CGAGACGGTGAAGCAGCAC
61.376
63.158
0.00
0.75
38.05
4.40
1220
1244
2.049156
CGAGACGGTGAAGCAGCA
60.049
61.111
0.00
0.00
0.00
4.41
1222
1246
2.259818
AGCGAGACGGTGAAGCAG
59.740
61.111
0.00
0.00
35.85
4.24
1516
5347
1.081277
GTCCCCCTTCTCCACCTCT
59.919
63.158
0.00
0.00
0.00
3.69
1574
5405
4.111016
CGGGTCGACGCACTGCTA
62.111
66.667
29.06
0.00
0.00
3.49
1692
6124
4.386867
TTCACGTCTTTGAGTTCTCTGT
57.613
40.909
1.53
0.00
0.00
3.41
1759
6223
1.153939
CGTCAGAAGCCTCACTCGG
60.154
63.158
0.00
0.00
0.00
4.63
1832
6296
9.628746
TGTTGATTGATTCATTGACTTAATGTG
57.371
29.630
0.00
0.00
45.17
3.21
1842
6796
6.643360
TGCTCAACTTGTTGATTGATTCATTG
59.357
34.615
15.35
3.04
34.43
2.82
1846
6800
7.306983
CCTTTTGCTCAACTTGTTGATTGATTC
60.307
37.037
15.35
3.89
34.43
2.52
1872
6826
2.285660
GCGATACCGTAAGCTTTGCTTC
60.286
50.000
3.20
0.84
40.54
3.86
1880
6834
1.352114
TGTTGTGCGATACCGTAAGC
58.648
50.000
0.00
3.27
38.24
3.09
1905
7102
1.109920
GGCGAGCTACTCATGGAGGA
61.110
60.000
0.00
0.00
33.35
3.71
1912
7109
1.134699
CAAAGGATGGCGAGCTACTCA
60.135
52.381
0.00
0.00
0.00
3.41
1948
7149
8.961092
CCATTGAGATTATTTTCAAACGCTATG
58.039
33.333
0.00
0.00
36.93
2.23
1966
7167
2.487762
GTTCGGTCAAATGCCATTGAGA
59.512
45.455
1.83
0.00
39.84
3.27
1977
7178
0.817634
CTGGCAGGTGTTCGGTCAAA
60.818
55.000
6.61
0.00
0.00
2.69
1993
7194
1.728425
GTTTTTAGTACCGACGCCTGG
59.272
52.381
0.00
0.00
0.00
4.45
2083
7284
3.499029
GGCCCCCACTATGTCCCC
61.499
72.222
0.00
0.00
0.00
4.81
2084
7285
2.694616
TGGCCCCCACTATGTCCC
60.695
66.667
0.00
0.00
0.00
4.46
2099
7300
2.104331
CGCGCTACTACCAGGTGG
59.896
66.667
5.56
0.49
42.17
4.61
2103
7304
2.191513
TAGGCCGCGCTACTACCAG
61.192
63.158
5.56
0.00
0.00
4.00
2105
7306
2.334295
GTAGGCCGCGCTACTACC
59.666
66.667
17.09
7.19
32.86
3.18
2126
7327
4.097863
GTTAGTTGCGGCGTGGGC
62.098
66.667
9.37
0.00
38.90
5.36
2146
7347
2.160813
CCAAAAACGGCGCTACAAGTAT
59.839
45.455
6.90
0.00
0.00
2.12
2198
7399
2.654749
TAGCGCGATATAGCAAGCAT
57.345
45.000
12.10
0.00
36.85
3.79
2210
7472
3.371102
AGATGCTTAGAAATAGCGCGA
57.629
42.857
12.10
0.00
41.54
5.87
2253
7515
6.927381
GCAAGTATAATAGGGTGACGTAACAT
59.073
38.462
5.18
0.00
33.84
2.71
2260
7522
7.379750
CCTAAGAGCAAGTATAATAGGGTGAC
58.620
42.308
0.00
0.00
0.00
3.67
2264
7526
7.554959
TTCCCTAAGAGCAAGTATAATAGGG
57.445
40.000
8.38
8.38
46.22
3.53
2286
7548
4.678509
TTCCACGCACTTCATGTTATTC
57.321
40.909
0.00
0.00
0.00
1.75
2385
8080
3.626924
CTTCCCCGCCTATCCCCG
61.627
72.222
0.00
0.00
0.00
5.73
2387
8082
4.315941
CGCTTCCCCGCCTATCCC
62.316
72.222
0.00
0.00
0.00
3.85
2398
8093
4.373116
TGACCCGTCAGCGCTTCC
62.373
66.667
7.50
0.00
34.14
3.46
2454
8149
0.463620
GACATGAGAGACCTCCAGGC
59.536
60.000
0.00
0.00
38.66
4.85
2471
8166
0.669625
AACTTCGCCAACCGCTAGAC
60.670
55.000
0.00
0.00
36.73
2.59
2484
8179
4.059459
AACTCGCGCGCAACTTCG
62.059
61.111
32.61
13.86
0.00
3.79
2511
8206
3.507924
TATTTGCTGCGCCCGCTG
61.508
61.111
17.83
14.06
42.51
5.18
2516
8211
1.154035
GTGGTGTATTTGCTGCGCC
60.154
57.895
4.18
0.00
40.28
6.53
2522
8217
0.446222
ATCGTGCGTGGTGTATTTGC
59.554
50.000
0.00
0.00
0.00
3.68
2531
8226
0.798009
GAAAATGGCATCGTGCGTGG
60.798
55.000
0.00
0.00
46.21
4.94
2533
8228
0.447801
GAGAAAATGGCATCGTGCGT
59.552
50.000
0.00
0.00
46.21
5.24
2536
8231
1.086696
ACGGAGAAAATGGCATCGTG
58.913
50.000
8.58
0.00
0.00
4.35
2537
8232
1.086696
CACGGAGAAAATGGCATCGT
58.913
50.000
0.00
1.63
0.00
3.73
2538
8233
0.248215
GCACGGAGAAAATGGCATCG
60.248
55.000
0.00
0.90
0.00
3.84
2539
8234
0.248215
CGCACGGAGAAAATGGCATC
60.248
55.000
0.00
0.00
0.00
3.91
2540
8235
1.802636
CGCACGGAGAAAATGGCAT
59.197
52.632
0.00
0.00
0.00
4.40
2541
8236
2.976840
GCGCACGGAGAAAATGGCA
61.977
57.895
0.30
0.00
0.00
4.92
2542
8237
2.202479
GCGCACGGAGAAAATGGC
60.202
61.111
0.30
0.00
0.00
4.40
2543
8238
1.135315
CAGCGCACGGAGAAAATGG
59.865
57.895
11.47
0.00
0.00
3.16
2544
8239
0.516877
TTCAGCGCACGGAGAAAATG
59.483
50.000
11.47
0.00
0.00
2.32
2545
8240
1.398390
GATTCAGCGCACGGAGAAAAT
59.602
47.619
11.47
0.00
0.00
1.82
2553
8248
4.202959
GTGATAAAATTGATTCAGCGCACG
59.797
41.667
11.47
0.00
0.00
5.34
2555
8250
5.094812
GTGTGATAAAATTGATTCAGCGCA
58.905
37.500
11.47
0.00
0.00
6.09
2557
8252
5.559227
TCGTGTGATAAAATTGATTCAGCG
58.441
37.500
0.00
0.00
0.00
5.18
2564
8259
9.288124
CAATAATTGCTCGTGTGATAAAATTGA
57.712
29.630
0.00
0.00
0.00
2.57
2573
8268
2.159720
CGCACAATAATTGCTCGTGTGA
60.160
45.455
6.30
0.00
41.67
3.58
2575
8270
1.465689
GCGCACAATAATTGCTCGTGT
60.466
47.619
0.30
0.00
37.87
4.49
2580
8275
1.029408
TCGGGCGCACAATAATTGCT
61.029
50.000
11.77
0.00
37.87
3.91
2583
8278
0.667993
CCATCGGGCGCACAATAATT
59.332
50.000
11.77
0.00
0.00
1.40
2599
8294
3.991051
CCGATACGCCCGCTCCAT
61.991
66.667
0.00
0.00
0.00
3.41
2649
8344
1.221414
GTGCTAGGAATAAGCCGCAG
58.779
55.000
0.00
0.00
39.30
5.18
2661
8356
3.340814
ACATCTTCAACAGGTGCTAGG
57.659
47.619
0.00
0.00
37.07
3.02
2667
8362
5.308825
CCACTAAGAACATCTTCAACAGGT
58.691
41.667
0.00
0.00
37.89
4.00
2670
8365
4.072131
GCCCACTAAGAACATCTTCAACA
58.928
43.478
0.00
0.00
37.89
3.33
2675
8370
5.717119
ATTAGGCCCACTAAGAACATCTT
57.283
39.130
0.00
0.00
44.43
2.40
2681
8376
6.888088
GTCCTTTTTATTAGGCCCACTAAGAA
59.112
38.462
0.00
0.00
44.43
2.52
2688
8383
3.371166
CCTCGTCCTTTTTATTAGGCCCA
60.371
47.826
0.00
0.00
32.59
5.36
2700
8395
3.456317
ACGTGAGCCTCGTCCTTT
58.544
55.556
0.00
0.00
36.85
3.11
2705
8400
0.968901
TATTGGGACGTGAGCCTCGT
60.969
55.000
0.00
2.65
44.27
4.18
2706
8401
0.174845
TTATTGGGACGTGAGCCTCG
59.825
55.000
0.00
0.00
0.00
4.63
2707
8402
2.007608
GTTTATTGGGACGTGAGCCTC
58.992
52.381
0.00
0.00
0.00
4.70
2708
8403
1.339727
GGTTTATTGGGACGTGAGCCT
60.340
52.381
0.00
0.00
0.00
4.58
2709
8404
1.092348
GGTTTATTGGGACGTGAGCC
58.908
55.000
0.00
0.00
0.00
4.70
2710
8405
1.092348
GGGTTTATTGGGACGTGAGC
58.908
55.000
0.00
0.00
0.00
4.26
2711
8406
1.365699
CGGGTTTATTGGGACGTGAG
58.634
55.000
0.00
0.00
0.00
3.51
2712
8407
0.036199
CCGGGTTTATTGGGACGTGA
60.036
55.000
0.00
0.00
0.00
4.35
2713
8408
0.036199
TCCGGGTTTATTGGGACGTG
60.036
55.000
0.00
0.00
0.00
4.49
2714
8409
0.036105
GTCCGGGTTTATTGGGACGT
60.036
55.000
0.00
0.00
39.53
4.34
2715
8410
2.771435
GTCCGGGTTTATTGGGACG
58.229
57.895
0.00
0.00
39.53
4.79
2717
8412
1.659022
TCTGTCCGGGTTTATTGGGA
58.341
50.000
0.00
0.00
0.00
4.37
2718
8413
2.365582
CTTCTGTCCGGGTTTATTGGG
58.634
52.381
0.00
0.00
0.00
4.12
2719
8414
2.026636
TCCTTCTGTCCGGGTTTATTGG
60.027
50.000
0.00
0.00
0.00
3.16
2720
8415
3.270877
CTCCTTCTGTCCGGGTTTATTG
58.729
50.000
0.00
0.00
0.00
1.90
2721
8416
2.910977
ACTCCTTCTGTCCGGGTTTATT
59.089
45.455
0.00
0.00
0.00
1.40
2722
8417
2.547990
ACTCCTTCTGTCCGGGTTTAT
58.452
47.619
0.00
0.00
0.00
1.40
2723
8418
2.019807
ACTCCTTCTGTCCGGGTTTA
57.980
50.000
0.00
0.00
0.00
2.01
2724
8419
1.900486
CTACTCCTTCTGTCCGGGTTT
59.100
52.381
0.00
0.00
0.00
3.27
2725
8420
1.558233
CTACTCCTTCTGTCCGGGTT
58.442
55.000
0.00
0.00
0.00
4.11
2726
8421
0.971447
GCTACTCCTTCTGTCCGGGT
60.971
60.000
0.00
0.00
0.00
5.28
2727
8422
0.684805
AGCTACTCCTTCTGTCCGGG
60.685
60.000
0.00
0.00
0.00
5.73
2728
8423
0.457851
CAGCTACTCCTTCTGTCCGG
59.542
60.000
0.00
0.00
0.00
5.14
2729
8424
0.457851
CCAGCTACTCCTTCTGTCCG
59.542
60.000
0.00
0.00
0.00
4.79
2730
8425
0.176910
GCCAGCTACTCCTTCTGTCC
59.823
60.000
0.00
0.00
0.00
4.02
2731
8426
1.190643
AGCCAGCTACTCCTTCTGTC
58.809
55.000
0.00
0.00
0.00
3.51
2732
8427
2.291930
ACTAGCCAGCTACTCCTTCTGT
60.292
50.000
0.00
0.00
0.00
3.41
2733
8428
2.360801
GACTAGCCAGCTACTCCTTCTG
59.639
54.545
0.00
0.00
0.00
3.02
2734
8429
2.024846
TGACTAGCCAGCTACTCCTTCT
60.025
50.000
0.00
0.00
0.00
2.85
2735
8430
2.100087
GTGACTAGCCAGCTACTCCTTC
59.900
54.545
0.00
0.00
0.00
3.46
2736
8431
2.104170
GTGACTAGCCAGCTACTCCTT
58.896
52.381
0.00
0.00
0.00
3.36
2737
8432
1.770294
GTGACTAGCCAGCTACTCCT
58.230
55.000
0.00
0.00
0.00
3.69
2738
8433
0.382515
CGTGACTAGCCAGCTACTCC
59.617
60.000
0.00
0.00
0.00
3.85
2739
8434
0.248702
GCGTGACTAGCCAGCTACTC
60.249
60.000
0.00
0.00
0.00
2.59
2740
8435
1.810532
GCGTGACTAGCCAGCTACT
59.189
57.895
0.00
0.00
0.00
2.57
2741
8436
1.586564
CGCGTGACTAGCCAGCTAC
60.587
63.158
0.00
0.00
0.00
3.58
2742
8437
2.044555
ACGCGTGACTAGCCAGCTA
61.045
57.895
12.93
0.00
0.00
3.32
2746
8441
3.295304
ATGCACGCGTGACTAGCCA
62.295
57.895
41.19
27.48
0.00
4.75
2748
8443
2.697425
CATGCACGCGTGACTAGC
59.303
61.111
41.19
26.07
35.09
3.42
2749
8444
1.423721
ATGCATGCACGCGTGACTAG
61.424
55.000
41.19
26.13
35.09
2.57
2750
8445
1.447663
ATGCATGCACGCGTGACTA
60.448
52.632
41.19
25.83
35.09
2.59
2762
8457
3.275286
TGCATCGATGGCACATGCATG
62.275
52.381
26.00
25.09
46.22
4.06
2763
8458
1.104577
TGCATCGATGGCACATGCAT
61.105
50.000
26.00
0.00
46.22
3.96
2770
8465
2.618442
TACTTCATGCATCGATGGCA
57.382
45.000
26.00
22.52
46.66
4.92
2799
8494
9.520515
AAATGTATAGGAAACTGACACAAGAAT
57.479
29.630
0.00
0.00
43.88
2.40
2800
8495
8.918202
AAATGTATAGGAAACTGACACAAGAA
57.082
30.769
0.00
0.00
43.88
2.52
2801
8496
8.918202
AAAATGTATAGGAAACTGACACAAGA
57.082
30.769
0.00
0.00
43.88
3.02
2804
8499
9.431887
GACTAAAATGTATAGGAAACTGACACA
57.568
33.333
0.00
0.00
43.88
3.72
2805
8500
9.654663
AGACTAAAATGTATAGGAAACTGACAC
57.345
33.333
0.00
0.00
43.88
3.67
2820
8515
9.686683
ATGCCTACAAAGATTAGACTAAAATGT
57.313
29.630
0.00
5.21
0.00
2.71
2844
8539
7.121611
TCTCACAAATTAGCATGGGCATATATG
59.878
37.037
8.45
8.45
44.61
1.78
2845
8540
7.177184
TCTCACAAATTAGCATGGGCATATAT
58.823
34.615
0.00
0.00
44.61
0.86
2846
8541
6.541907
TCTCACAAATTAGCATGGGCATATA
58.458
36.000
0.00
0.00
44.61
0.86
2848
8543
4.790937
TCTCACAAATTAGCATGGGCATA
58.209
39.130
0.00
0.00
44.61
3.14
2849
8544
3.634504
TCTCACAAATTAGCATGGGCAT
58.365
40.909
0.00
0.00
44.61
4.40
2850
8545
3.084536
TCTCACAAATTAGCATGGGCA
57.915
42.857
0.00
0.00
44.61
5.36
2851
8546
3.382546
ACATCTCACAAATTAGCATGGGC
59.617
43.478
0.00
0.00
41.61
5.36
2852
8547
6.889301
ATACATCTCACAAATTAGCATGGG
57.111
37.500
0.00
0.00
0.00
4.00
2853
8548
9.836076
CATTATACATCTCACAAATTAGCATGG
57.164
33.333
0.00
0.00
0.00
3.66
2854
8549
9.836076
CCATTATACATCTCACAAATTAGCATG
57.164
33.333
0.00
0.00
0.00
4.06
2856
8551
9.625747
TTCCATTATACATCTCACAAATTAGCA
57.374
29.630
0.00
0.00
0.00
3.49
2860
8555
9.125026
GTCCTTCCATTATACATCTCACAAATT
57.875
33.333
0.00
0.00
0.00
1.82
2861
8556
7.721399
GGTCCTTCCATTATACATCTCACAAAT
59.279
37.037
0.00
0.00
35.97
2.32
2862
8557
7.054124
GGTCCTTCCATTATACATCTCACAAA
58.946
38.462
0.00
0.00
35.97
2.83
2864
8559
5.665360
TGGTCCTTCCATTATACATCTCACA
59.335
40.000
0.00
0.00
41.93
3.58
2878
8573
1.526575
GGTCGTACGTGGTCCTTCCA
61.527
60.000
16.05
0.00
45.01
3.53
2879
8574
1.213799
GGTCGTACGTGGTCCTTCC
59.786
63.158
16.05
3.05
0.00
3.46
2880
8575
0.169894
GAGGTCGTACGTGGTCCTTC
59.830
60.000
16.05
9.21
0.00
3.46
2881
8576
0.538057
TGAGGTCGTACGTGGTCCTT
60.538
55.000
16.05
4.69
0.00
3.36
2882
8577
0.323178
ATGAGGTCGTACGTGGTCCT
60.323
55.000
16.05
17.24
0.00
3.85
2883
8578
0.100146
GATGAGGTCGTACGTGGTCC
59.900
60.000
16.05
13.11
0.00
4.46
2885
8580
1.201647
CAAGATGAGGTCGTACGTGGT
59.798
52.381
16.05
0.06
0.00
4.16
2886
8581
1.909376
CAAGATGAGGTCGTACGTGG
58.091
55.000
16.05
0.00
0.00
4.94
2887
8582
1.269166
GCAAGATGAGGTCGTACGTG
58.731
55.000
16.05
3.74
0.00
4.49
2889
8584
0.098200
TCGCAAGATGAGGTCGTACG
59.902
55.000
9.53
9.53
45.01
3.67
2899
8594
6.299259
TCAAGTTGTTGTCGTCGCAAGATG
62.299
45.833
2.11
0.00
42.56
2.90
2900
8595
4.288915
TCAAGTTGTTGTCGTCGCAAGAT
61.289
43.478
2.11
0.00
41.17
2.40
2901
8596
2.991597
TCAAGTTGTTGTCGTCGCAAGA
60.992
45.455
2.11
0.00
38.45
3.02
2903
8598
1.326245
CTCAAGTTGTTGTCGTCGCAA
59.674
47.619
2.11
0.00
34.98
4.85
2906
8601
1.567504
ACCTCAAGTTGTTGTCGTCG
58.432
50.000
2.11
0.00
34.98
5.12
2907
8602
3.057734
CCTACCTCAAGTTGTTGTCGTC
58.942
50.000
2.11
0.00
34.98
4.20
2908
8603
2.224209
CCCTACCTCAAGTTGTTGTCGT
60.224
50.000
2.11
0.00
34.98
4.34
2909
8604
2.036733
TCCCTACCTCAAGTTGTTGTCG
59.963
50.000
2.11
0.00
34.98
4.35
2910
8605
3.764237
TCCCTACCTCAAGTTGTTGTC
57.236
47.619
2.11
0.00
34.98
3.18
2913
8608
4.597507
TCAAGATCCCTACCTCAAGTTGTT
59.402
41.667
2.11
0.00
0.00
2.83
2916
8611
5.032846
TGATCAAGATCCCTACCTCAAGTT
58.967
41.667
7.54
0.00
37.02
2.66
2917
8612
4.624913
TGATCAAGATCCCTACCTCAAGT
58.375
43.478
7.54
0.00
37.02
3.16
2919
8614
4.202398
GCATGATCAAGATCCCTACCTCAA
60.202
45.833
0.00
0.00
37.02
3.02
2920
8615
3.326006
GCATGATCAAGATCCCTACCTCA
59.674
47.826
0.00
0.00
37.02
3.86
2921
8616
3.326006
TGCATGATCAAGATCCCTACCTC
59.674
47.826
0.00
0.00
37.02
3.85
2922
8617
3.321039
TGCATGATCAAGATCCCTACCT
58.679
45.455
0.00
0.00
37.02
3.08
2923
8618
3.777106
TGCATGATCAAGATCCCTACC
57.223
47.619
0.00
0.00
37.02
3.18
Based at the University of Bristol with support from BBSRC .
AutoCloner maintained by Alex Coulton.