Multiple sequence alignment - TraesCS3D01G403900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G403900 chr3D 100.000 5073 0 0 1 5073 517881250 517886322 0.000000e+00 9369.0
1 TraesCS3D01G403900 chr3D 84.685 111 10 5 4958 5064 114675789 114675896 2.500000e-18 104.0
2 TraesCS3D01G403900 chr3D 89.583 48 5 0 246 293 261035206 261035159 1.530000e-05 62.1
3 TraesCS3D01G403900 chr3A 93.979 3172 136 23 338 3482 653508986 653512129 0.000000e+00 4748.0
4 TraesCS3D01G403900 chr3A 81.972 649 33 32 4115 4690 653512862 653513499 1.650000e-129 473.0
5 TraesCS3D01G403900 chr3A 92.891 211 10 4 4763 4968 653513522 653513732 8.250000e-78 302.0
6 TraesCS3D01G403900 chr3A 88.701 177 17 2 3952 4127 653512623 653512797 3.980000e-51 213.0
7 TraesCS3D01G403900 chr1B 77.060 789 158 18 1061 1845 485283552 485284321 2.810000e-117 433.0
8 TraesCS3D01G403900 chr1B 78.652 267 46 10 1 261 66201624 66201363 3.140000e-37 167.0
9 TraesCS3D01G403900 chr1B 79.200 250 40 11 14 257 434763775 434763532 4.060000e-36 163.0
10 TraesCS3D01G403900 chr1A 77.128 787 155 19 1061 1845 461996171 461996934 2.810000e-117 433.0
11 TraesCS3D01G403900 chr1A 78.305 295 45 17 10 295 25945715 25945999 6.750000e-39 172.0
12 TraesCS3D01G403900 chr1A 100.000 86 0 0 3485 3570 338153329 338153244 5.260000e-35 159.0
13 TraesCS3D01G403900 chr1A 100.000 86 0 0 3485 3570 493137922 493138007 5.260000e-35 159.0
14 TraesCS3D01G403900 chr1A 77.941 272 42 16 1 262 61355958 61356221 2.450000e-33 154.0
15 TraesCS3D01G403900 chr1D 76.546 776 163 15 1071 1845 362483911 362484668 1.700000e-109 407.0
16 TraesCS3D01G403900 chr3B 80.224 268 42 10 1 261 784686857 784687120 1.860000e-44 191.0
17 TraesCS3D01G403900 chr3B 85.593 118 10 5 4958 5071 166156281 166156167 3.210000e-22 117.0
18 TraesCS3D01G403900 chr6A 79.389 262 42 11 6 261 222549931 222550186 1.880000e-39 174.0
19 TraesCS3D01G403900 chr5A 97.872 94 2 0 3485 3578 326533378 326533285 4.060000e-36 163.0
20 TraesCS3D01G403900 chr5D 100.000 87 0 0 3483 3569 277816472 277816386 1.460000e-35 161.0
21 TraesCS3D01G403900 chr5D 100.000 86 0 0 3485 3570 79602572 79602487 5.260000e-35 159.0
22 TraesCS3D01G403900 chr6D 100.000 86 0 0 3485 3570 29741081 29740996 5.260000e-35 159.0
23 TraesCS3D01G403900 chr6D 100.000 86 0 0 3485 3570 101445684 101445599 5.260000e-35 159.0
24 TraesCS3D01G403900 chr6D 100.000 86 0 0 3485 3570 142577028 142577113 5.260000e-35 159.0
25 TraesCS3D01G403900 chr6D 100.000 86 0 0 3485 3570 414526257 414526172 5.260000e-35 159.0
26 TraesCS3D01G403900 chr5B 77.860 271 45 14 1 262 22065097 22065361 2.450000e-33 154.0
27 TraesCS3D01G403900 chr5B 77.154 267 49 10 1 259 506798671 506798933 1.470000e-30 145.0
28 TraesCS3D01G403900 chr2B 77.863 262 47 11 5 262 83396824 83396570 8.800000e-33 152.0
29 TraesCS3D01G403900 chr6B 92.308 78 4 2 4958 5034 18723597 18723521 5.370000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G403900 chr3D 517881250 517886322 5072 False 9369 9369 100.00000 1 5073 1 chr3D.!!$F2 5072
1 TraesCS3D01G403900 chr3A 653508986 653513732 4746 False 1434 4748 89.38575 338 4968 4 chr3A.!!$F1 4630
2 TraesCS3D01G403900 chr1B 485283552 485284321 769 False 433 433 77.06000 1061 1845 1 chr1B.!!$F1 784
3 TraesCS3D01G403900 chr1A 461996171 461996934 763 False 433 433 77.12800 1061 1845 1 chr1A.!!$F3 784
4 TraesCS3D01G403900 chr1D 362483911 362484668 757 False 407 407 76.54600 1071 1845 1 chr1D.!!$F1 774

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
281 282 0.036671 TGGTAGCTCGACTCGTCTCA 60.037 55.000 0.00 0.0 0.00 3.27 F
305 306 0.038618 TCTGGATGTGACCGACGTTG 60.039 55.000 0.00 0.0 0.00 4.10 F
371 372 0.109597 CAACATTTGGCCGTCTCTGC 60.110 55.000 0.00 0.0 0.00 4.26 F
853 872 0.168128 GAATCAAGCACCGGGAAACG 59.832 55.000 6.32 0.0 43.80 3.60 F
855 874 0.536460 ATCAAGCACCGGGAAACGTT 60.536 50.000 6.32 0.0 42.24 3.99 F
1332 1351 1.079127 CCCCCTGTACAACAGCTCG 60.079 63.158 0.00 0.0 44.63 5.03 F
2504 2526 1.269448 CGCCACAATTGTAAAGGCTGT 59.731 47.619 26.77 0.0 43.07 4.40 F
3211 3238 1.190833 CCGAGGCCATAGGAGCTGAT 61.191 60.000 5.01 0.0 0.00 2.90 F
3769 3803 0.103208 CCGAGACTCACCTGTATGGC 59.897 60.000 2.82 0.0 40.22 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1800 1819 0.482446 ATTTGCTGGGAGTCCACCAA 59.518 50.000 12.30 7.82 36.97 3.67 R
2119 2138 1.496060 TTGCTATCCGTCCTGGTCAT 58.504 50.000 0.00 0.00 39.52 3.06 R
2353 2375 0.771127 TGCCTAACCAGCAACCTTCT 59.229 50.000 0.00 0.00 37.28 2.85 R
2454 2476 0.678950 AACATGAAAAACAGGGCCCG 59.321 50.000 18.44 14.39 34.35 6.13 R
2455 2477 2.158827 ACAAACATGAAAAACAGGGCCC 60.159 45.455 16.46 16.46 34.35 5.80 R
2515 2537 2.421619 GCCAGTCATAGCAGGCTTATC 58.578 52.381 0.00 0.00 43.70 1.75 R
3749 3783 0.103208 CCATACAGGTGAGTCTCGGC 59.897 60.000 0.00 0.00 0.00 5.54 R
4036 4146 0.244721 GCCAACCTGCAGAATTGGTC 59.755 55.000 32.89 25.60 44.05 4.02 R
4739 4998 0.246635 AAACTCGTCTGGTCCGATGG 59.753 55.000 0.00 0.00 33.27 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 4.896829 CGGGAGAGGAGCCGGCTA 62.897 72.222 32.97 0.00 0.00 3.93
30 31 2.915137 GGGAGAGGAGCCGGCTAG 60.915 72.222 32.97 0.00 0.00 3.42
31 32 2.915137 GGAGAGGAGCCGGCTAGG 60.915 72.222 32.97 0.00 44.97 3.02
32 33 2.915137 GAGAGGAGCCGGCTAGGG 60.915 72.222 32.97 0.00 41.48 3.53
39 40 2.187163 GCCGGCTAGGGTTGTCTC 59.813 66.667 22.15 0.00 41.48 3.36
40 41 2.901042 CCGGCTAGGGTTGTCTCC 59.099 66.667 0.00 0.00 35.97 3.71
41 42 1.987855 CCGGCTAGGGTTGTCTCCA 60.988 63.158 0.00 0.00 35.97 3.86
42 43 1.218316 CGGCTAGGGTTGTCTCCAC 59.782 63.158 0.00 0.00 0.00 4.02
43 44 1.218316 GGCTAGGGTTGTCTCCACG 59.782 63.158 0.00 0.00 0.00 4.94
44 45 1.218316 GCTAGGGTTGTCTCCACGG 59.782 63.158 0.00 0.00 0.00 4.94
45 46 1.898154 CTAGGGTTGTCTCCACGGG 59.102 63.158 0.00 0.00 0.00 5.28
46 47 0.613853 CTAGGGTTGTCTCCACGGGA 60.614 60.000 0.00 0.00 0.00 5.14
63 64 1.315690 GGAGCCGCCCTTTTTATACC 58.684 55.000 0.00 0.00 0.00 2.73
64 65 1.409101 GGAGCCGCCCTTTTTATACCA 60.409 52.381 0.00 0.00 0.00 3.25
65 66 1.674441 GAGCCGCCCTTTTTATACCAC 59.326 52.381 0.00 0.00 0.00 4.16
66 67 1.004979 AGCCGCCCTTTTTATACCACA 59.995 47.619 0.00 0.00 0.00 4.17
67 68 1.404035 GCCGCCCTTTTTATACCACAG 59.596 52.381 0.00 0.00 0.00 3.66
68 69 2.718563 CCGCCCTTTTTATACCACAGT 58.281 47.619 0.00 0.00 0.00 3.55
69 70 2.422127 CCGCCCTTTTTATACCACAGTG 59.578 50.000 0.00 0.00 0.00 3.66
70 71 2.159435 CGCCCTTTTTATACCACAGTGC 60.159 50.000 0.00 0.00 0.00 4.40
71 72 2.159435 GCCCTTTTTATACCACAGTGCG 60.159 50.000 0.00 0.00 0.00 5.34
72 73 2.159435 CCCTTTTTATACCACAGTGCGC 60.159 50.000 0.00 0.00 0.00 6.09
73 74 2.475519 CCTTTTTATACCACAGTGCGCG 60.476 50.000 0.00 0.00 0.00 6.86
74 75 2.081725 TTTTATACCACAGTGCGCGA 57.918 45.000 12.10 0.00 0.00 5.87
75 76 2.081725 TTTATACCACAGTGCGCGAA 57.918 45.000 12.10 0.00 0.00 4.70
76 77 2.081725 TTATACCACAGTGCGCGAAA 57.918 45.000 12.10 0.00 0.00 3.46
77 78 2.303163 TATACCACAGTGCGCGAAAT 57.697 45.000 12.10 0.00 0.00 2.17
78 79 0.726827 ATACCACAGTGCGCGAAATG 59.273 50.000 14.04 14.04 0.00 2.32
79 80 0.319986 TACCACAGTGCGCGAAATGA 60.320 50.000 23.35 0.00 0.00 2.57
80 81 1.154413 CCACAGTGCGCGAAATGAC 60.154 57.895 23.35 2.98 0.00 3.06
81 82 1.507713 CACAGTGCGCGAAATGACG 60.508 57.895 23.35 7.97 0.00 4.35
82 83 1.663388 ACAGTGCGCGAAATGACGA 60.663 52.632 23.35 0.00 35.09 4.20
83 84 1.218875 ACAGTGCGCGAAATGACGAA 61.219 50.000 23.35 0.00 35.09 3.85
84 85 0.110867 CAGTGCGCGAAATGACGAAA 60.111 50.000 9.40 0.00 35.09 3.46
85 86 0.584396 AGTGCGCGAAATGACGAAAA 59.416 45.000 12.10 0.00 35.09 2.29
86 87 1.196808 AGTGCGCGAAATGACGAAAAT 59.803 42.857 12.10 0.00 35.09 1.82
87 88 1.314412 GTGCGCGAAATGACGAAAATG 59.686 47.619 12.10 0.00 35.09 2.32
88 89 0.291701 GCGCGAAATGACGAAAATGC 59.708 50.000 12.10 0.00 35.09 3.56
89 90 0.907171 CGCGAAATGACGAAAATGCC 59.093 50.000 0.00 0.00 35.09 4.40
90 91 1.268265 GCGAAATGACGAAAATGCCC 58.732 50.000 0.00 0.00 35.09 5.36
91 92 1.908065 CGAAATGACGAAAATGCCCC 58.092 50.000 0.00 0.00 35.09 5.80
92 93 1.469079 CGAAATGACGAAAATGCCCCC 60.469 52.381 0.00 0.00 35.09 5.40
93 94 0.530288 AAATGACGAAAATGCCCCCG 59.470 50.000 0.00 0.00 0.00 5.73
94 95 1.319614 AATGACGAAAATGCCCCCGG 61.320 55.000 0.00 0.00 0.00 5.73
108 109 3.861797 CCGGCGGGGCAGTCTATT 61.862 66.667 20.56 0.00 0.00 1.73
109 110 2.189521 CGGCGGGGCAGTCTATTT 59.810 61.111 0.00 0.00 0.00 1.40
110 111 1.444250 CGGCGGGGCAGTCTATTTA 59.556 57.895 0.00 0.00 0.00 1.40
111 112 0.878961 CGGCGGGGCAGTCTATTTAC 60.879 60.000 0.00 0.00 0.00 2.01
112 113 0.179468 GGCGGGGCAGTCTATTTACA 59.821 55.000 0.00 0.00 0.00 2.41
113 114 1.296727 GCGGGGCAGTCTATTTACAC 58.703 55.000 0.00 0.00 0.00 2.90
114 115 1.567504 CGGGGCAGTCTATTTACACG 58.432 55.000 0.00 0.00 0.00 4.49
115 116 1.296727 GGGGCAGTCTATTTACACGC 58.703 55.000 0.00 0.00 0.00 5.34
116 117 0.928229 GGGCAGTCTATTTACACGCG 59.072 55.000 3.53 3.53 0.00 6.01
117 118 0.928229 GGCAGTCTATTTACACGCGG 59.072 55.000 12.47 1.27 0.00 6.46
118 119 1.636988 GCAGTCTATTTACACGCGGT 58.363 50.000 12.47 8.38 0.00 5.68
119 120 1.323534 GCAGTCTATTTACACGCGGTG 59.676 52.381 12.47 9.20 39.75 4.94
120 121 1.924524 CAGTCTATTTACACGCGGTGG 59.075 52.381 12.47 1.38 37.94 4.61
121 122 0.648958 GTCTATTTACACGCGGTGGC 59.351 55.000 12.47 0.00 37.94 5.01
122 123 0.246910 TCTATTTACACGCGGTGGCA 59.753 50.000 12.47 0.00 37.94 4.92
123 124 0.372334 CTATTTACACGCGGTGGCAC 59.628 55.000 12.47 9.70 37.94 5.01
124 125 1.352882 TATTTACACGCGGTGGCACG 61.353 55.000 12.47 8.28 37.94 5.34
143 144 4.038080 CCGGGGCGCAAACTGTTC 62.038 66.667 10.83 0.00 0.00 3.18
144 145 3.283684 CGGGGCGCAAACTGTTCA 61.284 61.111 10.83 0.00 0.00 3.18
145 146 2.625823 CGGGGCGCAAACTGTTCAT 61.626 57.895 10.83 0.00 0.00 2.57
146 147 1.665442 GGGGCGCAAACTGTTCATT 59.335 52.632 10.83 0.00 0.00 2.57
147 148 0.885196 GGGGCGCAAACTGTTCATTA 59.115 50.000 10.83 0.00 0.00 1.90
148 149 1.402325 GGGGCGCAAACTGTTCATTAC 60.402 52.381 10.83 0.00 0.00 1.89
149 150 1.602191 GGCGCAAACTGTTCATTACG 58.398 50.000 10.83 0.00 0.00 3.18
150 151 1.195900 GGCGCAAACTGTTCATTACGA 59.804 47.619 10.83 0.00 0.00 3.43
151 152 2.495939 GCGCAAACTGTTCATTACGAG 58.504 47.619 0.30 0.00 0.00 4.18
152 153 2.495939 CGCAAACTGTTCATTACGAGC 58.504 47.619 0.00 0.00 0.00 5.03
153 154 2.495939 GCAAACTGTTCATTACGAGCG 58.504 47.619 0.00 0.00 0.00 5.03
154 155 2.096417 GCAAACTGTTCATTACGAGCGT 60.096 45.455 0.00 0.00 0.00 5.07
155 156 3.722123 CAAACTGTTCATTACGAGCGTC 58.278 45.455 0.00 0.00 0.00 5.19
156 157 3.299340 AACTGTTCATTACGAGCGTCT 57.701 42.857 0.00 0.00 0.00 4.18
157 158 2.864968 ACTGTTCATTACGAGCGTCTC 58.135 47.619 0.00 0.00 0.00 3.36
169 170 3.755041 GAGCGTCTCGATTTTTATCCG 57.245 47.619 0.00 0.00 0.00 4.18
170 171 3.369385 GAGCGTCTCGATTTTTATCCGA 58.631 45.455 0.00 0.00 0.00 4.55
171 172 3.114065 AGCGTCTCGATTTTTATCCGAC 58.886 45.455 0.00 0.00 0.00 4.79
172 173 2.098021 GCGTCTCGATTTTTATCCGACG 60.098 50.000 12.09 12.09 40.63 5.12
173 174 2.466571 CGTCTCGATTTTTATCCGACGG 59.533 50.000 7.84 7.84 37.35 4.79
174 175 2.218075 GTCTCGATTTTTATCCGACGGC 59.782 50.000 9.66 0.00 0.00 5.68
175 176 1.525619 CTCGATTTTTATCCGACGGCC 59.474 52.381 9.66 0.00 0.00 6.13
176 177 0.231279 CGATTTTTATCCGACGGCCG 59.769 55.000 26.86 26.86 38.18 6.13
177 178 1.574134 GATTTTTATCCGACGGCCGA 58.426 50.000 35.90 10.13 41.76 5.54
178 179 1.525619 GATTTTTATCCGACGGCCGAG 59.474 52.381 35.90 24.42 41.76 4.63
179 180 0.460635 TTTTTATCCGACGGCCGAGG 60.461 55.000 35.90 31.88 41.76 4.63
180 181 2.300850 TTTTATCCGACGGCCGAGGG 62.301 60.000 35.90 30.09 41.76 4.30
196 197 4.208686 GGCGTTCCGGAGCGAGAT 62.209 66.667 39.79 0.00 37.19 2.75
197 198 2.202756 GCGTTCCGGAGCGAGATT 60.203 61.111 39.79 0.00 37.19 2.40
198 199 2.517450 GCGTTCCGGAGCGAGATTG 61.517 63.158 39.79 14.05 37.19 2.67
199 200 1.878522 CGTTCCGGAGCGAGATTGG 60.879 63.158 33.91 3.65 37.19 3.16
200 201 1.515954 GTTCCGGAGCGAGATTGGA 59.484 57.895 3.34 0.00 0.00 3.53
201 202 0.806492 GTTCCGGAGCGAGATTGGAC 60.806 60.000 3.34 0.00 0.00 4.02
202 203 2.278857 CCGGAGCGAGATTGGACG 60.279 66.667 0.00 0.00 0.00 4.79
203 204 2.278857 CGGAGCGAGATTGGACGG 60.279 66.667 0.00 0.00 0.00 4.79
204 205 2.893398 GGAGCGAGATTGGACGGT 59.107 61.111 0.00 0.00 42.67 4.83
205 206 4.403976 GAGCGAGATTGGACGGTC 57.596 61.111 0.00 0.00 46.27 4.79
206 207 4.019983 AGCGAGATTGGACGGTCT 57.980 55.556 8.23 0.00 35.37 3.85
207 208 3.186345 AGCGAGATTGGACGGTCTA 57.814 52.632 8.23 0.00 35.37 2.59
208 209 1.471119 AGCGAGATTGGACGGTCTAA 58.529 50.000 9.43 9.43 35.37 2.10
209 210 1.822990 AGCGAGATTGGACGGTCTAAA 59.177 47.619 11.04 5.28 35.37 1.85
210 211 2.431057 AGCGAGATTGGACGGTCTAAAT 59.569 45.455 11.04 9.66 35.37 1.40
211 212 2.795470 GCGAGATTGGACGGTCTAAATC 59.205 50.000 20.10 20.10 0.00 2.17
212 213 3.043586 CGAGATTGGACGGTCTAAATCG 58.956 50.000 21.49 21.49 34.84 3.34
213 214 2.795470 GAGATTGGACGGTCTAAATCGC 59.205 50.000 20.83 19.18 34.84 4.58
214 215 2.167693 AGATTGGACGGTCTAAATCGCA 59.832 45.455 20.83 4.80 34.84 5.10
215 216 1.717194 TTGGACGGTCTAAATCGCAC 58.283 50.000 8.23 0.00 0.00 5.34
216 217 0.108520 TGGACGGTCTAAATCGCACC 60.109 55.000 8.23 0.00 0.00 5.01
217 218 0.108520 GGACGGTCTAAATCGCACCA 60.109 55.000 8.23 0.00 0.00 4.17
218 219 1.673626 GGACGGTCTAAATCGCACCAA 60.674 52.381 8.23 0.00 0.00 3.67
219 220 1.659098 GACGGTCTAAATCGCACCAAG 59.341 52.381 0.00 0.00 0.00 3.61
220 221 1.001633 ACGGTCTAAATCGCACCAAGT 59.998 47.619 0.00 0.00 0.00 3.16
221 222 2.231964 ACGGTCTAAATCGCACCAAGTA 59.768 45.455 0.00 0.00 0.00 2.24
222 223 3.255725 CGGTCTAAATCGCACCAAGTAA 58.744 45.455 0.00 0.00 0.00 2.24
223 224 3.680937 CGGTCTAAATCGCACCAAGTAAA 59.319 43.478 0.00 0.00 0.00 2.01
224 225 4.435121 CGGTCTAAATCGCACCAAGTAAAC 60.435 45.833 0.00 0.00 0.00 2.01
225 226 4.435121 GGTCTAAATCGCACCAAGTAAACG 60.435 45.833 0.00 0.00 0.00 3.60
226 227 4.386652 GTCTAAATCGCACCAAGTAAACGA 59.613 41.667 0.00 0.00 37.15 3.85
227 228 5.063060 GTCTAAATCGCACCAAGTAAACGAT 59.937 40.000 0.00 0.00 44.68 3.73
228 229 4.336532 AAATCGCACCAAGTAAACGATC 57.663 40.909 0.00 0.00 42.19 3.69
229 230 1.717194 TCGCACCAAGTAAACGATCC 58.283 50.000 0.00 0.00 0.00 3.36
230 231 0.368907 CGCACCAAGTAAACGATCCG 59.631 55.000 0.00 0.00 0.00 4.18
231 232 1.717194 GCACCAAGTAAACGATCCGA 58.283 50.000 0.00 0.00 0.00 4.55
232 233 1.392510 GCACCAAGTAAACGATCCGAC 59.607 52.381 0.00 0.00 0.00 4.79
233 234 1.652124 CACCAAGTAAACGATCCGACG 59.348 52.381 0.00 0.00 39.31 5.12
234 235 1.274596 CCAAGTAAACGATCCGACGG 58.725 55.000 7.84 7.84 37.61 4.79
235 236 0.643820 CAAGTAAACGATCCGACGGC 59.356 55.000 9.66 0.00 37.61 5.68
236 237 0.459063 AAGTAAACGATCCGACGGCC 60.459 55.000 9.66 2.30 37.61 6.13
237 238 1.879884 GTAAACGATCCGACGGCCC 60.880 63.158 9.66 1.90 37.61 5.80
238 239 2.349672 TAAACGATCCGACGGCCCA 61.350 57.895 9.66 0.00 37.61 5.36
239 240 2.287457 TAAACGATCCGACGGCCCAG 62.287 60.000 9.66 2.96 37.61 4.45
241 242 3.833645 CGATCCGACGGCCCAGAA 61.834 66.667 9.66 0.00 0.00 3.02
242 243 2.107141 GATCCGACGGCCCAGAAG 59.893 66.667 9.66 0.00 0.00 2.85
243 244 4.162690 ATCCGACGGCCCAGAAGC 62.163 66.667 9.66 0.00 0.00 3.86
251 252 3.200522 GCCCAGAAGCCCAAATCG 58.799 61.111 0.00 0.00 0.00 3.34
252 253 3.068729 GCCCAGAAGCCCAAATCGC 62.069 63.158 0.00 0.00 0.00 4.58
253 254 1.379044 CCCAGAAGCCCAAATCGCT 60.379 57.895 0.00 0.00 38.53 4.93
254 255 1.660560 CCCAGAAGCCCAAATCGCTG 61.661 60.000 0.00 0.00 36.47 5.18
255 256 0.677731 CCAGAAGCCCAAATCGCTGA 60.678 55.000 0.00 0.00 36.47 4.26
256 257 0.731417 CAGAAGCCCAAATCGCTGAG 59.269 55.000 0.00 0.00 36.47 3.35
257 258 0.615331 AGAAGCCCAAATCGCTGAGA 59.385 50.000 0.00 0.00 36.47 3.27
258 259 1.012841 GAAGCCCAAATCGCTGAGAG 58.987 55.000 0.00 0.00 36.47 3.20
259 260 0.615331 AAGCCCAAATCGCTGAGAGA 59.385 50.000 0.00 0.00 36.47 3.10
260 261 0.177604 AGCCCAAATCGCTGAGAGAG 59.822 55.000 0.00 0.00 34.56 3.20
261 262 1.435408 GCCCAAATCGCTGAGAGAGC 61.435 60.000 0.00 0.00 45.20 4.09
262 263 0.177604 CCCAAATCGCTGAGAGAGCT 59.822 55.000 0.00 0.00 46.64 4.09
263 264 1.288350 CCAAATCGCTGAGAGAGCTG 58.712 55.000 0.00 0.00 46.64 4.24
264 265 1.288350 CAAATCGCTGAGAGAGCTGG 58.712 55.000 0.00 0.00 46.64 4.85
265 266 0.901124 AAATCGCTGAGAGAGCTGGT 59.099 50.000 0.00 0.00 46.64 4.00
266 267 1.769026 AATCGCTGAGAGAGCTGGTA 58.231 50.000 0.00 0.00 46.64 3.25
267 268 1.317613 ATCGCTGAGAGAGCTGGTAG 58.682 55.000 0.00 0.00 46.64 3.18
268 269 1.065600 CGCTGAGAGAGCTGGTAGC 59.934 63.158 0.00 0.00 46.64 3.58
277 278 3.188965 GCTGGTAGCTCGACTCGT 58.811 61.111 0.00 0.00 38.45 4.18
278 279 1.062845 GCTGGTAGCTCGACTCGTC 59.937 63.158 0.00 0.00 38.45 4.20
279 280 1.370587 GCTGGTAGCTCGACTCGTCT 61.371 60.000 0.00 0.36 38.45 4.18
280 281 0.653636 CTGGTAGCTCGACTCGTCTC 59.346 60.000 0.00 0.00 0.00 3.36
281 282 0.036671 TGGTAGCTCGACTCGTCTCA 60.037 55.000 0.00 0.00 0.00 3.27
282 283 1.301423 GGTAGCTCGACTCGTCTCAT 58.699 55.000 0.00 0.00 0.00 2.90
283 284 1.262151 GGTAGCTCGACTCGTCTCATC 59.738 57.143 0.00 0.00 0.00 2.92
284 285 2.206750 GTAGCTCGACTCGTCTCATCT 58.793 52.381 0.00 0.00 0.00 2.90
285 286 1.745232 AGCTCGACTCGTCTCATCTT 58.255 50.000 0.00 0.00 0.00 2.40
286 287 2.088423 AGCTCGACTCGTCTCATCTTT 58.912 47.619 0.00 0.00 0.00 2.52
287 288 2.096819 AGCTCGACTCGTCTCATCTTTC 59.903 50.000 0.00 0.00 0.00 2.62
288 289 2.096819 GCTCGACTCGTCTCATCTTTCT 59.903 50.000 0.00 0.00 0.00 2.52
289 290 3.679725 CTCGACTCGTCTCATCTTTCTG 58.320 50.000 0.00 0.00 0.00 3.02
290 291 2.420372 TCGACTCGTCTCATCTTTCTGG 59.580 50.000 0.00 0.00 0.00 3.86
291 292 2.420372 CGACTCGTCTCATCTTTCTGGA 59.580 50.000 0.00 0.00 0.00 3.86
292 293 3.066064 CGACTCGTCTCATCTTTCTGGAT 59.934 47.826 0.00 0.00 0.00 3.41
293 294 4.358851 GACTCGTCTCATCTTTCTGGATG 58.641 47.826 0.00 0.00 43.01 3.51
294 295 3.766591 ACTCGTCTCATCTTTCTGGATGT 59.233 43.478 0.00 0.00 42.45 3.06
295 296 4.111198 CTCGTCTCATCTTTCTGGATGTG 58.889 47.826 0.00 0.00 42.45 3.21
296 297 3.763897 TCGTCTCATCTTTCTGGATGTGA 59.236 43.478 0.00 0.00 42.45 3.58
298 299 4.478206 TCTCATCTTTCTGGATGTGACC 57.522 45.455 0.00 0.00 42.45 4.02
299 300 3.118992 TCTCATCTTTCTGGATGTGACCG 60.119 47.826 0.00 0.00 42.45 4.79
300 301 2.831526 TCATCTTTCTGGATGTGACCGA 59.168 45.455 0.00 0.00 42.45 4.69
301 302 2.743636 TCTTTCTGGATGTGACCGAC 57.256 50.000 0.00 0.00 0.00 4.79
302 303 1.067846 TCTTTCTGGATGTGACCGACG 60.068 52.381 0.00 0.00 0.00 5.12
303 304 0.677288 TTTCTGGATGTGACCGACGT 59.323 50.000 0.00 0.00 0.00 4.34
304 305 0.677288 TTCTGGATGTGACCGACGTT 59.323 50.000 0.00 0.00 0.00 3.99
305 306 0.038618 TCTGGATGTGACCGACGTTG 60.039 55.000 0.00 0.00 0.00 4.10
306 307 0.038618 CTGGATGTGACCGACGTTGA 60.039 55.000 3.74 0.00 0.00 3.18
307 308 0.606096 TGGATGTGACCGACGTTGAT 59.394 50.000 3.74 0.00 0.00 2.57
308 309 0.999406 GGATGTGACCGACGTTGATG 59.001 55.000 3.74 0.00 0.00 3.07
309 310 0.370273 GATGTGACCGACGTTGATGC 59.630 55.000 3.74 0.00 0.00 3.91
310 311 0.320334 ATGTGACCGACGTTGATGCA 60.320 50.000 3.74 0.00 0.00 3.96
311 312 0.943835 TGTGACCGACGTTGATGCAG 60.944 55.000 3.74 0.00 0.00 4.41
312 313 0.666274 GTGACCGACGTTGATGCAGA 60.666 55.000 3.74 0.00 0.00 4.26
313 314 0.246360 TGACCGACGTTGATGCAGAT 59.754 50.000 3.74 0.00 0.00 2.90
314 315 0.647410 GACCGACGTTGATGCAGATG 59.353 55.000 3.74 0.00 0.00 2.90
315 316 0.740868 ACCGACGTTGATGCAGATGG 60.741 55.000 3.74 0.00 0.00 3.51
316 317 0.460109 CCGACGTTGATGCAGATGGA 60.460 55.000 3.74 0.00 0.00 3.41
317 318 1.575244 CGACGTTGATGCAGATGGAT 58.425 50.000 0.00 0.00 0.00 3.41
318 319 1.259770 CGACGTTGATGCAGATGGATG 59.740 52.381 0.00 0.00 0.00 3.51
319 320 2.554142 GACGTTGATGCAGATGGATGA 58.446 47.619 0.00 0.00 0.00 2.92
320 321 2.938451 GACGTTGATGCAGATGGATGAA 59.062 45.455 0.00 0.00 0.00 2.57
321 322 3.548770 ACGTTGATGCAGATGGATGAAT 58.451 40.909 0.00 0.00 0.00 2.57
322 323 3.949754 ACGTTGATGCAGATGGATGAATT 59.050 39.130 0.00 0.00 0.00 2.17
323 324 4.036027 ACGTTGATGCAGATGGATGAATTC 59.964 41.667 0.00 0.00 0.00 2.17
324 325 4.534168 GTTGATGCAGATGGATGAATTCG 58.466 43.478 0.04 0.00 0.00 3.34
325 326 2.551032 TGATGCAGATGGATGAATTCGC 59.449 45.455 0.04 0.00 0.00 4.70
326 327 2.336945 TGCAGATGGATGAATTCGCT 57.663 45.000 0.04 0.00 0.00 4.93
327 328 2.646930 TGCAGATGGATGAATTCGCTT 58.353 42.857 0.04 0.00 0.00 4.68
328 329 3.018856 TGCAGATGGATGAATTCGCTTT 58.981 40.909 0.04 0.00 0.00 3.51
329 330 3.181494 TGCAGATGGATGAATTCGCTTTG 60.181 43.478 0.04 0.00 0.00 2.77
330 331 3.369385 CAGATGGATGAATTCGCTTTGC 58.631 45.455 0.04 0.00 0.00 3.68
331 332 3.066342 CAGATGGATGAATTCGCTTTGCT 59.934 43.478 0.04 0.00 0.00 3.91
332 333 2.925578 TGGATGAATTCGCTTTGCTG 57.074 45.000 0.04 0.00 0.00 4.41
333 334 1.135315 TGGATGAATTCGCTTTGCTGC 60.135 47.619 0.04 0.00 0.00 5.25
334 335 1.133790 GGATGAATTCGCTTTGCTGCT 59.866 47.619 0.00 0.00 0.00 4.24
335 336 2.448219 GATGAATTCGCTTTGCTGCTC 58.552 47.619 0.00 0.00 0.00 4.26
336 337 1.527034 TGAATTCGCTTTGCTGCTCT 58.473 45.000 0.00 0.00 0.00 4.09
351 352 2.989253 TCTCGCTCTCCGGCAACA 60.989 61.111 0.00 0.00 37.59 3.33
371 372 0.109597 CAACATTTGGCCGTCTCTGC 60.110 55.000 0.00 0.00 0.00 4.26
372 373 1.577328 AACATTTGGCCGTCTCTGCG 61.577 55.000 0.00 0.00 0.00 5.18
376 377 3.825160 TTGGCCGTCTCTGCGCTTT 62.825 57.895 9.73 0.00 0.00 3.51
407 408 1.000993 AAAACCCCATGCCGCCATA 59.999 52.632 0.00 0.00 0.00 2.74
408 409 1.326951 AAAACCCCATGCCGCCATAC 61.327 55.000 0.00 0.00 0.00 2.39
409 410 3.731766 AACCCCATGCCGCCATACC 62.732 63.158 0.00 0.00 0.00 2.73
463 469 2.983030 AATGCCAAGTCCGCGCAA 60.983 55.556 8.75 0.00 35.85 4.85
465 471 2.476534 AATGCCAAGTCCGCGCAAAG 62.477 55.000 8.75 0.00 35.85 2.77
504 510 3.357079 CCAGGCAAGCCACGTCAC 61.357 66.667 14.40 0.00 38.92 3.67
506 512 3.923864 AGGCAAGCCACGTCACGA 61.924 61.111 14.40 0.00 38.92 4.35
514 520 1.372872 CCACGTCACGAGACATGCA 60.373 57.895 2.91 0.00 45.23 3.96
518 524 1.284297 CGTCACGAGACATGCAGCAA 61.284 55.000 13.46 0.00 45.23 3.91
571 577 2.297895 TGGCGGCATGTTAGGTCCT 61.298 57.895 7.97 0.00 0.00 3.85
573 579 0.179468 GGCGGCATGTTAGGTCCTTA 59.821 55.000 3.07 0.00 0.00 2.69
578 584 3.369052 CGGCATGTTAGGTCCTTAGTCAA 60.369 47.826 0.00 0.00 0.00 3.18
624 630 2.863988 CCCCACCCACCTTCCCTT 60.864 66.667 0.00 0.00 0.00 3.95
625 631 2.440599 CCCACCCACCTTCCCTTG 59.559 66.667 0.00 0.00 0.00 3.61
626 632 2.283173 CCACCCACCTTCCCTTGC 60.283 66.667 0.00 0.00 0.00 4.01
627 633 2.283173 CACCCACCTTCCCTTGCC 60.283 66.667 0.00 0.00 0.00 4.52
628 634 2.452491 ACCCACCTTCCCTTGCCT 60.452 61.111 0.00 0.00 0.00 4.75
629 635 2.091283 ACCCACCTTCCCTTGCCTT 61.091 57.895 0.00 0.00 0.00 4.35
630 636 1.304464 CCCACCTTCCCTTGCCTTC 60.304 63.158 0.00 0.00 0.00 3.46
631 637 1.770324 CCACCTTCCCTTGCCTTCT 59.230 57.895 0.00 0.00 0.00 2.85
632 638 0.322906 CCACCTTCCCTTGCCTTCTC 60.323 60.000 0.00 0.00 0.00 2.87
633 639 0.401738 CACCTTCCCTTGCCTTCTCA 59.598 55.000 0.00 0.00 0.00 3.27
634 640 0.695347 ACCTTCCCTTGCCTTCTCAG 59.305 55.000 0.00 0.00 0.00 3.35
635 641 0.695347 CCTTCCCTTGCCTTCTCAGT 59.305 55.000 0.00 0.00 0.00 3.41
651 657 0.961358 CAGTCGTCTCCTTCCTCGGT 60.961 60.000 0.00 0.00 0.00 4.69
652 658 0.677414 AGTCGTCTCCTTCCTCGGTC 60.677 60.000 0.00 0.00 0.00 4.79
669 675 2.029649 CGGTCCTTCCTGTTCGAACTTA 60.030 50.000 27.32 8.91 0.00 2.24
676 682 2.897969 TCCTGTTCGAACTTAGCTTCCT 59.102 45.455 27.32 0.00 0.00 3.36
678 684 3.254892 CTGTTCGAACTTAGCTTCCTCC 58.745 50.000 27.32 0.00 0.00 4.30
731 742 3.151906 GGTCACTCACCACCAGCT 58.848 61.111 0.00 0.00 45.98 4.24
732 743 2.362242 GGTCACTCACCACCAGCTA 58.638 57.895 0.00 0.00 45.98 3.32
747 766 2.135139 CAGCTAGTTTTCAGCGTGTCA 58.865 47.619 0.00 0.00 43.97 3.58
748 767 2.156504 CAGCTAGTTTTCAGCGTGTCAG 59.843 50.000 0.00 0.00 43.97 3.51
780 799 2.043852 GCCGGAGAGGGAGAGTCA 60.044 66.667 5.05 0.00 41.48 3.41
784 803 0.750182 CGGAGAGGGAGAGTCAGTCC 60.750 65.000 0.00 0.00 0.00 3.85
791 810 0.688087 GGAGAGTCAGTCCCCGGAAT 60.688 60.000 0.73 0.00 0.00 3.01
853 872 0.168128 GAATCAAGCACCGGGAAACG 59.832 55.000 6.32 0.00 43.80 3.60
855 874 0.536460 ATCAAGCACCGGGAAACGTT 60.536 50.000 6.32 0.00 42.24 3.99
931 950 1.569493 CTTCGCGGTGAACTGGTTG 59.431 57.895 6.13 0.00 31.87 3.77
934 953 1.890041 CGCGGTGAACTGGTTGGAA 60.890 57.895 0.00 0.00 0.00 3.53
961 980 2.442272 AGATCGCAGCCGGGTAGT 60.442 61.111 5.47 0.00 34.56 2.73
1332 1351 1.079127 CCCCCTGTACAACAGCTCG 60.079 63.158 0.00 0.00 44.63 5.03
1443 1462 2.742372 GACATGCCGCGGTTCAGT 60.742 61.111 28.70 19.80 0.00 3.41
1586 1605 3.624777 AGGTTTATGAGGTGAATGGCAG 58.375 45.455 0.00 0.00 0.00 4.85
1623 1642 4.401519 ACGATCCGATTTTTAGGAGTGAGA 59.598 41.667 0.00 0.00 40.26 3.27
1722 1741 2.517402 ACAAAAAGGGTCCGCGCA 60.517 55.556 8.75 0.00 0.00 6.09
1800 1819 5.680594 TGCTTATTTTCAATTCAGGGCAT 57.319 34.783 0.00 0.00 0.00 4.40
1846 1865 3.947196 TGACATGTGAGTGTTCTTGCTTT 59.053 39.130 1.15 0.00 31.16 3.51
1885 1904 4.770795 TGTTTGTGGGTAATTGTTTTGGG 58.229 39.130 0.00 0.00 0.00 4.12
1966 1985 4.267357 TCTGTTCTCGAAACAAAAACGG 57.733 40.909 12.17 4.63 0.00 4.44
1999 2018 5.814705 CAGACAAACCAACCTTTGCAATTAA 59.185 36.000 0.00 0.00 34.93 1.40
2130 2149 2.698855 AGGAATCAATGACCAGGACG 57.301 50.000 0.00 0.00 0.00 4.79
2145 2167 3.600388 CAGGACGGATAGCAAAACTTCT 58.400 45.455 0.00 0.00 0.00 2.85
2162 2184 5.413309 ACTTCTGAGGGTCACAAATAGAG 57.587 43.478 0.00 0.00 0.00 2.43
2172 2194 7.489160 AGGGTCACAAATAGAGAAAAACAAAC 58.511 34.615 0.00 0.00 0.00 2.93
2184 2206 4.645588 AGAAAAACAAACCACCGGATTGTA 59.354 37.500 9.46 0.00 45.59 2.41
2196 2218 5.163561 CCACCGGATTGTATTATTGCAAAGT 60.164 40.000 9.46 0.00 30.96 2.66
2211 2233 5.351233 TGCAAAGTTAACTTCGTACCATG 57.649 39.130 20.78 14.03 34.61 3.66
2216 2238 7.411588 GCAAAGTTAACTTCGTACCATGTCTAG 60.412 40.741 20.78 0.00 34.61 2.43
2253 2275 3.998341 TGCAAAGTTAACTCCGTACCATC 59.002 43.478 8.95 0.00 0.00 3.51
2257 2279 6.626623 GCAAAGTTAACTCCGTACCATCTCTA 60.627 42.308 8.95 0.00 0.00 2.43
2301 2323 5.243060 GCAACATTAAAGGGTGTTAGGTTCT 59.757 40.000 0.00 0.00 36.48 3.01
2328 2350 5.028549 CCACAACTTAGTGAGGCTGATAT 57.971 43.478 0.00 0.00 42.05 1.63
2345 2367 8.394040 AGGCTGATATTAATAAATTGTAGGCCT 58.606 33.333 11.78 11.78 0.00 5.19
2347 2369 9.231297 GCTGATATTAATAAATTGTAGGCCTCA 57.769 33.333 9.68 4.34 0.00 3.86
2367 2389 1.986882 CCTGAAGAAGGTTGCTGGTT 58.013 50.000 0.00 0.00 41.74 3.67
2375 2397 1.358152 AGGTTGCTGGTTAGGCACTA 58.642 50.000 0.00 0.00 41.75 2.74
2413 2435 6.839124 ATGTTTTGATGATGCTAGGTTTCA 57.161 33.333 0.00 0.00 0.00 2.69
2436 2458 6.660521 TCATGCATCCATACCAGATTATTTCC 59.339 38.462 0.00 0.00 0.00 3.13
2468 2490 2.831685 AAAATCGGGCCCTGTTTTTC 57.168 45.000 22.43 0.00 0.00 2.29
2504 2526 1.269448 CGCCACAATTGTAAAGGCTGT 59.731 47.619 26.77 0.00 43.07 4.40
2642 2664 6.530019 AACATGGCAAAAATAGGGAGTAAG 57.470 37.500 0.00 0.00 0.00 2.34
2661 2683 9.489084 GGAGTAAGTTTTAAATGCCAAAGAAAT 57.511 29.630 0.00 0.00 0.00 2.17
2991 3018 3.508793 ACATGCACTGAATTCTTTCCCTG 59.491 43.478 7.05 1.18 0.00 4.45
3039 3066 8.534954 AGTACTTCATTATAAGACTAGCCACA 57.465 34.615 0.00 0.00 0.00 4.17
3040 3067 8.634444 AGTACTTCATTATAAGACTAGCCACAG 58.366 37.037 0.00 0.00 0.00 3.66
3048 3075 3.838244 AGACTAGCCACAGTTTGAACA 57.162 42.857 0.00 0.00 0.00 3.18
3063 3090 4.715534 TTGAACAGAAGGTGTAATCCCA 57.284 40.909 0.00 0.00 39.03 4.37
3085 3112 3.517100 ACTATGATTGTGGAGCACAGACT 59.483 43.478 0.00 0.00 45.39 3.24
3090 3117 2.174363 TGTGGAGCACAGACTTCATG 57.826 50.000 0.00 0.00 39.62 3.07
3094 3121 1.881973 GGAGCACAGACTTCATGCAAA 59.118 47.619 0.00 0.00 41.97 3.68
3095 3122 2.294233 GGAGCACAGACTTCATGCAAAA 59.706 45.455 0.00 0.00 41.97 2.44
3211 3238 1.190833 CCGAGGCCATAGGAGCTGAT 61.191 60.000 5.01 0.00 0.00 2.90
3355 3382 6.203723 GTCATCCTTCTACCATACTTGATTGC 59.796 42.308 0.00 0.00 0.00 3.56
3424 3451 4.830826 ATTTTCTCACCTTTTGACGGAC 57.169 40.909 0.00 0.00 0.00 4.79
3433 3460 1.525619 CTTTTGACGGACGGTGAGTTC 59.474 52.381 0.00 0.00 0.00 3.01
3440 3467 1.202382 CGGACGGTGAGTTCCTTATCC 60.202 57.143 0.00 0.00 0.00 2.59
3460 3487 9.565090 CTTATCCATGATAACATTCTTTCCTGA 57.435 33.333 0.00 0.00 34.15 3.86
3491 3518 8.906238 TTTAGGATAACAAAGTACTACTCCCT 57.094 34.615 0.00 0.00 0.00 4.20
3492 3519 8.530804 TTAGGATAACAAAGTACTACTCCCTC 57.469 38.462 0.00 0.00 0.00 4.30
3495 3522 6.380560 GGATAACAAAGTACTACTCCCTCTGT 59.619 42.308 0.00 0.00 0.00 3.41
3496 3523 5.725325 AACAAAGTACTACTCCCTCTGTC 57.275 43.478 0.00 0.00 0.00 3.51
3497 3524 4.087907 ACAAAGTACTACTCCCTCTGTCC 58.912 47.826 0.00 0.00 0.00 4.02
3498 3525 3.385314 AAGTACTACTCCCTCTGTCCC 57.615 52.381 0.00 0.00 0.00 4.46
3499 3526 2.285707 AGTACTACTCCCTCTGTCCCA 58.714 52.381 0.00 0.00 0.00 4.37
3500 3527 2.860041 AGTACTACTCCCTCTGTCCCAT 59.140 50.000 0.00 0.00 0.00 4.00
3501 3528 4.052922 AGTACTACTCCCTCTGTCCCATA 58.947 47.826 0.00 0.00 0.00 2.74
3502 3529 4.481280 AGTACTACTCCCTCTGTCCCATAA 59.519 45.833 0.00 0.00 0.00 1.90
3503 3530 4.561254 ACTACTCCCTCTGTCCCATAAT 57.439 45.455 0.00 0.00 0.00 1.28
3504 3531 5.681494 ACTACTCCCTCTGTCCCATAATA 57.319 43.478 0.00 0.00 0.00 0.98
3505 3532 6.234404 ACTACTCCCTCTGTCCCATAATAT 57.766 41.667 0.00 0.00 0.00 1.28
3506 3533 7.358255 ACTACTCCCTCTGTCCCATAATATA 57.642 40.000 0.00 0.00 0.00 0.86
3507 3534 7.776745 ACTACTCCCTCTGTCCCATAATATAA 58.223 38.462 0.00 0.00 0.00 0.98
3508 3535 7.896496 ACTACTCCCTCTGTCCCATAATATAAG 59.104 40.741 0.00 0.00 0.00 1.73
3509 3536 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
3510 3537 7.491681 ACTCCCTCTGTCCCATAATATAAGAT 58.508 38.462 0.00 0.00 0.00 2.40
3511 3538 7.401493 ACTCCCTCTGTCCCATAATATAAGATG 59.599 40.741 0.00 0.00 0.00 2.90
3512 3539 7.256399 TCCCTCTGTCCCATAATATAAGATGT 58.744 38.462 0.00 0.00 0.00 3.06
3513 3540 7.739444 TCCCTCTGTCCCATAATATAAGATGTT 59.261 37.037 0.00 0.00 0.00 2.71
3514 3541 8.386264 CCCTCTGTCCCATAATATAAGATGTTT 58.614 37.037 0.00 0.00 0.00 2.83
3515 3542 9.799106 CCTCTGTCCCATAATATAAGATGTTTT 57.201 33.333 0.00 0.00 0.00 2.43
3518 3545 9.683069 CTGTCCCATAATATAAGATGTTTTTGC 57.317 33.333 0.00 0.00 0.00 3.68
3519 3546 9.194972 TGTCCCATAATATAAGATGTTTTTGCA 57.805 29.630 0.00 0.00 0.00 4.08
3522 3549 8.981647 CCCATAATATAAGATGTTTTTGCAAGC 58.018 33.333 0.00 0.00 0.00 4.01
3523 3550 9.754382 CCATAATATAAGATGTTTTTGCAAGCT 57.246 29.630 0.00 0.00 0.00 3.74
3530 3557 9.846248 ATAAGATGTTTTTGCAAGCTAAACTAG 57.154 29.630 20.28 0.00 33.92 2.57
3545 3572 4.632538 AAACTAGCTTGCAAAAACGTCT 57.367 36.364 0.00 0.00 0.00 4.18
3547 3574 5.744666 AACTAGCTTGCAAAAACGTCTTA 57.255 34.783 0.00 0.00 0.00 2.10
3548 3575 5.091910 ACTAGCTTGCAAAAACGTCTTAC 57.908 39.130 0.00 0.00 0.00 2.34
3552 3579 4.739716 AGCTTGCAAAAACGTCTTACATTG 59.260 37.500 0.00 0.00 0.00 2.82
3556 3583 3.733727 GCAAAAACGTCTTACATTGTGGG 59.266 43.478 0.00 0.00 0.00 4.61
3562 3589 2.618053 GTCTTACATTGTGGGACGGAG 58.382 52.381 0.00 0.00 0.00 4.63
3626 3656 1.682854 TCTTGTTTCTGCTTGCAAGGG 59.317 47.619 27.10 4.86 38.90 3.95
3647 3677 3.258372 GGAACCTGGAATTTCTTGAACCC 59.742 47.826 0.00 0.00 0.00 4.11
3650 3680 3.117131 ACCTGGAATTTCTTGAACCCTGT 60.117 43.478 0.00 0.00 0.00 4.00
3652 3682 5.222337 ACCTGGAATTTCTTGAACCCTGTAT 60.222 40.000 0.00 0.00 0.00 2.29
3653 3683 6.011981 ACCTGGAATTTCTTGAACCCTGTATA 60.012 38.462 0.00 0.00 0.00 1.47
3654 3684 6.318900 CCTGGAATTTCTTGAACCCTGTATAC 59.681 42.308 0.00 0.00 0.00 1.47
3655 3685 6.785076 TGGAATTTCTTGAACCCTGTATACA 58.215 36.000 5.25 5.25 0.00 2.29
3656 3686 7.410174 TGGAATTTCTTGAACCCTGTATACAT 58.590 34.615 5.91 0.00 0.00 2.29
3657 3687 8.553153 TGGAATTTCTTGAACCCTGTATACATA 58.447 33.333 5.91 0.00 0.00 2.29
3658 3688 8.837389 GGAATTTCTTGAACCCTGTATACATAC 58.163 37.037 5.91 0.00 0.00 2.39
3659 3689 8.747538 AATTTCTTGAACCCTGTATACATACC 57.252 34.615 5.91 0.00 32.33 2.73
3660 3690 6.877668 TTCTTGAACCCTGTATACATACCA 57.122 37.500 5.91 0.00 32.33 3.25
3661 3691 7.446106 TTCTTGAACCCTGTATACATACCAT 57.554 36.000 5.91 0.00 32.33 3.55
3662 3692 6.826668 TCTTGAACCCTGTATACATACCATG 58.173 40.000 5.91 3.94 32.33 3.66
3663 3693 4.968259 TGAACCCTGTATACATACCATGC 58.032 43.478 5.91 0.00 32.33 4.06
3703 3737 2.380410 CGGTAGCTGTGCGTCAACC 61.380 63.158 0.00 0.00 0.00 3.77
3713 3747 1.871039 GTGCGTCAACCTGAGCTTTAA 59.129 47.619 0.00 0.00 0.00 1.52
3725 3759 6.303839 ACCTGAGCTTTAAAATTGTGTAGGA 58.696 36.000 0.00 0.00 0.00 2.94
3766 3800 2.730934 TAGCCGAGACTCACCTGTAT 57.269 50.000 2.82 0.00 0.00 2.29
3767 3801 1.107114 AGCCGAGACTCACCTGTATG 58.893 55.000 2.82 0.00 0.00 2.39
3769 3803 0.103208 CCGAGACTCACCTGTATGGC 59.897 60.000 2.82 0.00 40.22 4.40
3770 3804 0.817654 CGAGACTCACCTGTATGGCA 59.182 55.000 2.82 0.00 40.22 4.92
3773 3807 1.487976 AGACTCACCTGTATGGCATGG 59.512 52.381 10.98 5.44 40.22 3.66
3782 3816 3.189910 CCTGTATGGCATGGATGAATTCG 59.810 47.826 10.98 0.00 0.00 3.34
3788 3822 2.095059 GGCATGGATGAATTCGGCATAC 60.095 50.000 0.04 0.00 0.00 2.39
3814 3848 2.927014 GCTCAAGTACTGGACCAACTCG 60.927 54.545 0.00 0.00 0.00 4.18
3841 3875 4.681942 CGAAGTTATCCAGAATAAGCCTCG 59.318 45.833 0.00 0.00 30.39 4.63
3845 3879 5.308237 AGTTATCCAGAATAAGCCTCGGATT 59.692 40.000 0.00 0.00 35.03 3.01
3911 3945 2.996631 AGCCGATTTTCAGCTGATTCT 58.003 42.857 19.04 4.59 34.99 2.40
3920 3954 6.906157 TTTTCAGCTGATTCTGGAAATTCT 57.094 33.333 19.04 0.00 36.82 2.40
3921 3955 6.506500 TTTCAGCTGATTCTGGAAATTCTC 57.493 37.500 19.04 0.00 34.91 2.87
3924 3958 5.821470 TCAGCTGATTCTGGAAATTCTCATC 59.179 40.000 13.74 0.00 34.91 2.92
3929 3963 7.660617 GCTGATTCTGGAAATTCTCATCTCATA 59.339 37.037 0.00 0.00 0.00 2.15
3943 3977 8.484641 TCTCATCTCATAAACTTAGTTTGCAG 57.515 34.615 19.32 11.91 36.37 4.41
3944 3978 7.065085 TCTCATCTCATAAACTTAGTTTGCAGC 59.935 37.037 19.32 0.00 36.37 5.25
3945 3979 5.530519 TCTCATAAACTTAGTTTGCAGCG 57.469 39.130 19.32 5.41 36.37 5.18
3947 3981 3.751175 TCATAAACTTAGTTTGCAGCGCT 59.249 39.130 19.32 2.64 36.37 5.92
3960 4070 1.661112 GCAGCGCTTCCTACTTAGTTG 59.339 52.381 7.50 0.00 0.00 3.16
3980 4090 7.524717 AGTTGTGCAAGTATTTATGTCCTTT 57.475 32.000 0.00 0.00 0.00 3.11
3986 4096 9.908152 GTGCAAGTATTTATGTCCTTTAACTTT 57.092 29.630 0.00 0.00 0.00 2.66
3997 4107 6.242396 TGTCCTTTAACTTTATGGCTTGCTA 58.758 36.000 0.00 0.00 0.00 3.49
4001 4111 8.466798 TCCTTTAACTTTATGGCTTGCTAATTC 58.533 33.333 0.00 0.00 0.00 2.17
4020 4130 7.201857 GCTAATTCTGGAGTTGAATAATGGCTT 60.202 37.037 0.00 0.00 34.19 4.35
4023 4133 5.431765 TCTGGAGTTGAATAATGGCTTCTC 58.568 41.667 0.00 0.00 0.00 2.87
4024 4134 5.045651 TCTGGAGTTGAATAATGGCTTCTCA 60.046 40.000 0.00 0.00 0.00 3.27
4030 4140 1.959042 ATAATGGCTTCTCACGCTGG 58.041 50.000 0.00 0.00 0.00 4.85
4036 4146 1.703438 GCTTCTCACGCTGGCTCATG 61.703 60.000 0.00 0.00 0.00 3.07
4037 4147 0.108472 CTTCTCACGCTGGCTCATGA 60.108 55.000 0.00 0.00 0.00 3.07
4045 4155 1.760192 GCTGGCTCATGACCAATTCT 58.240 50.000 15.11 0.00 36.56 2.40
4076 4186 0.035630 AAAGCTGGCTGGCTGACTAG 60.036 55.000 12.22 0.00 42.24 2.57
4078 4188 1.153469 GCTGGCTGGCTGACTAGTC 60.153 63.158 16.32 16.32 0.00 2.59
4079 4189 1.892819 GCTGGCTGGCTGACTAGTCA 61.893 60.000 23.80 23.80 35.85 3.41
4080 4190 0.108424 CTGGCTGGCTGACTAGTCAC 60.108 60.000 21.74 17.01 32.56 3.67
4081 4191 0.831711 TGGCTGGCTGACTAGTCACA 60.832 55.000 21.74 17.16 32.56 3.58
4082 4192 0.539051 GGCTGGCTGACTAGTCACAT 59.461 55.000 21.74 0.00 32.56 3.21
4090 4200 3.927142 GCTGACTAGTCACATTGTACACC 59.073 47.826 21.74 0.00 35.46 4.16
4116 4226 5.187687 ACCTTTTGTTTTTCTGGTCGAGTA 58.812 37.500 0.00 0.00 0.00 2.59
4129 4315 2.474816 GTCGAGTATCATGTTGCTCCC 58.525 52.381 14.07 4.16 33.17 4.30
4142 4328 1.673767 TGCTCCCTTCCTCATCCTTT 58.326 50.000 0.00 0.00 0.00 3.11
4148 4334 2.420687 CCCTTCCTCATCCTTTCTTCGG 60.421 54.545 0.00 0.00 0.00 4.30
4156 4342 2.649331 TCCTTTCTTCGGTTAGCTCG 57.351 50.000 0.00 0.00 0.00 5.03
4166 4352 4.548991 TCGGTTAGCTCGAGTAAGAATC 57.451 45.455 15.13 2.94 32.51 2.52
4174 4360 4.216472 AGCTCGAGTAAGAATCGCATATCA 59.784 41.667 15.13 0.00 39.98 2.15
4190 4376 7.931275 TCGCATATCACCTGTCATATAGATAC 58.069 38.462 0.00 0.00 0.00 2.24
4191 4377 7.775561 TCGCATATCACCTGTCATATAGATACT 59.224 37.037 0.00 0.00 0.00 2.12
4192 4378 9.057089 CGCATATCACCTGTCATATAGATACTA 57.943 37.037 0.00 0.00 0.00 1.82
4195 4381 7.889873 ATCACCTGTCATATAGATACTAGGC 57.110 40.000 0.00 0.00 0.00 3.93
4196 4382 7.033782 TCACCTGTCATATAGATACTAGGCT 57.966 40.000 0.00 0.00 0.00 4.58
4198 4384 6.661377 CACCTGTCATATAGATACTAGGCTGT 59.339 42.308 0.00 0.00 0.00 4.40
4199 4385 7.177568 CACCTGTCATATAGATACTAGGCTGTT 59.822 40.741 0.00 0.00 0.00 3.16
4201 4387 8.589338 CCTGTCATATAGATACTAGGCTGTTTT 58.411 37.037 0.00 0.00 0.00 2.43
4202 4388 9.416794 CTGTCATATAGATACTAGGCTGTTTTG 57.583 37.037 0.00 0.00 0.00 2.44
4239 4431 7.913674 AGTCTTTTTGGACATAGAGAACATC 57.086 36.000 0.00 0.00 38.57 3.06
4303 4495 3.525537 TGGAAATTCATCTCTCTCGCAC 58.474 45.455 0.00 0.00 0.00 5.34
4308 4500 3.297830 TTCATCTCTCTCGCACGAAAA 57.702 42.857 0.00 0.00 0.00 2.29
4318 4510 2.251642 GCACGAAAACGGTCTGCCT 61.252 57.895 0.00 0.00 0.00 4.75
4319 4511 0.947180 GCACGAAAACGGTCTGCCTA 60.947 55.000 0.00 0.00 0.00 3.93
4328 4520 2.906354 ACGGTCTGCCTATCATTTGTC 58.094 47.619 0.00 0.00 0.00 3.18
4334 4526 5.059161 GTCTGCCTATCATTTGTCTATGCA 58.941 41.667 0.00 0.00 0.00 3.96
4337 4529 5.623169 TGCCTATCATTTGTCTATGCATCA 58.377 37.500 0.19 0.00 0.00 3.07
4344 4537 6.557110 TCATTTGTCTATGCATCACACATTG 58.443 36.000 0.19 6.17 0.00 2.82
4365 4583 1.602311 ACAAAGCCTGCTCTTCTGTG 58.398 50.000 0.00 0.00 0.00 3.66
4367 4585 1.805345 CAAAGCCTGCTCTTCTGTGAG 59.195 52.381 0.00 0.00 37.16 3.51
4407 4626 5.739752 TCTGATATTTTGCAATCGTGGAG 57.260 39.130 0.00 0.00 0.00 3.86
4409 4628 6.057533 TCTGATATTTTGCAATCGTGGAGAT 58.942 36.000 0.00 0.00 42.43 2.75
4426 4645 6.854892 CGTGGAGATTCATTTCTAATTGCATC 59.145 38.462 0.00 0.00 0.00 3.91
4433 4670 4.877823 TCATTTCTAATTGCATCGCTGTCT 59.122 37.500 0.00 0.00 0.00 3.41
4436 4673 1.003116 CTAATTGCATCGCTGTCTGGC 60.003 52.381 0.00 0.00 0.00 4.85
4473 4713 2.943033 CTCTCTCCACGTTTGTTGGTTT 59.057 45.455 0.00 0.00 0.00 3.27
4496 4747 9.031360 GTTTTCCATGATGAAAATGAGATGATG 57.969 33.333 11.47 0.00 43.78 3.07
4504 4755 3.393426 AAATGAGATGATGCAAGGGGT 57.607 42.857 0.00 0.00 0.00 4.95
4528 4787 0.890996 GTATGCATGCCTACCTGCCC 60.891 60.000 19.14 0.00 37.59 5.36
4529 4788 2.067932 TATGCATGCCTACCTGCCCC 62.068 60.000 16.68 0.00 37.59 5.80
4545 4804 3.640000 CCGCGTGCCGATCCATTC 61.640 66.667 4.92 0.00 40.02 2.67
4547 4806 2.890474 GCGTGCCGATCCATTCGT 60.890 61.111 0.00 0.00 46.65 3.85
4548 4807 3.005898 CGTGCCGATCCATTCGTG 58.994 61.111 0.00 0.00 46.65 4.35
4549 4808 1.809619 CGTGCCGATCCATTCGTGT 60.810 57.895 0.00 0.00 46.65 4.49
4550 4809 1.358725 CGTGCCGATCCATTCGTGTT 61.359 55.000 0.00 0.00 46.65 3.32
4551 4810 0.802494 GTGCCGATCCATTCGTGTTT 59.198 50.000 0.00 0.00 46.65 2.83
4552 4811 1.199097 GTGCCGATCCATTCGTGTTTT 59.801 47.619 0.00 0.00 46.65 2.43
4612 4871 2.702270 AGGCAACCCAAAGAGGAAAT 57.298 45.000 0.00 0.00 41.22 2.17
4678 4937 2.496817 CTAGTGGCTGCCTCCGAC 59.503 66.667 21.03 9.56 0.00 4.79
4689 4948 0.883370 GCCTCCGACGGAAAAAGTGT 60.883 55.000 18.93 0.00 0.00 3.55
4690 4949 1.145803 CCTCCGACGGAAAAAGTGTC 58.854 55.000 18.93 0.00 0.00 3.67
4691 4950 1.145803 CTCCGACGGAAAAAGTGTCC 58.854 55.000 18.93 0.00 0.00 4.02
4692 4951 0.249996 TCCGACGGAAAAAGTGTCCC 60.250 55.000 15.79 0.00 0.00 4.46
4693 4952 0.250166 CCGACGGAAAAAGTGTCCCT 60.250 55.000 8.64 0.00 0.00 4.20
4694 4953 0.865769 CGACGGAAAAAGTGTCCCTG 59.134 55.000 0.00 0.00 0.00 4.45
4695 4954 1.235724 GACGGAAAAAGTGTCCCTGG 58.764 55.000 0.00 0.00 0.00 4.45
4696 4955 0.549469 ACGGAAAAAGTGTCCCTGGT 59.451 50.000 0.00 0.00 0.00 4.00
4697 4956 0.951558 CGGAAAAAGTGTCCCTGGTG 59.048 55.000 0.00 0.00 0.00 4.17
4698 4957 0.673985 GGAAAAAGTGTCCCTGGTGC 59.326 55.000 0.00 0.00 0.00 5.01
4699 4958 1.692411 GAAAAAGTGTCCCTGGTGCT 58.308 50.000 0.00 0.00 0.00 4.40
4700 4959 1.338020 GAAAAAGTGTCCCTGGTGCTG 59.662 52.381 0.00 0.00 0.00 4.41
4701 4960 0.468029 AAAAGTGTCCCTGGTGCTGG 60.468 55.000 0.00 0.00 0.00 4.85
4702 4961 1.645402 AAAGTGTCCCTGGTGCTGGT 61.645 55.000 0.00 0.00 0.00 4.00
4703 4962 2.281761 GTGTCCCTGGTGCTGGTG 60.282 66.667 0.00 0.00 0.00 4.17
4704 4963 4.269523 TGTCCCTGGTGCTGGTGC 62.270 66.667 0.00 0.00 40.20 5.01
4728 4987 2.091885 GTGGCCTGGGAGATTTAATCCA 60.092 50.000 3.32 0.00 38.70 3.41
4750 5009 4.873129 CGACGCCCATCGGACCAG 62.873 72.222 0.00 0.00 43.86 4.00
4751 5010 3.458163 GACGCCCATCGGACCAGA 61.458 66.667 0.00 0.00 43.86 3.86
4752 5011 3.718210 GACGCCCATCGGACCAGAC 62.718 68.421 0.00 0.00 43.86 3.51
4753 5012 4.873129 CGCCCATCGGACCAGACG 62.873 72.222 0.00 0.00 33.78 4.18
4754 5013 3.458163 GCCCATCGGACCAGACGA 61.458 66.667 0.00 0.00 45.19 4.20
4755 5014 2.808315 CCCATCGGACCAGACGAG 59.192 66.667 0.00 0.00 44.24 4.18
4756 5015 2.052690 CCCATCGGACCAGACGAGT 61.053 63.158 0.00 0.00 44.24 4.18
4757 5016 1.605058 CCCATCGGACCAGACGAGTT 61.605 60.000 0.00 0.00 44.24 3.01
4758 5017 0.246635 CCATCGGACCAGACGAGTTT 59.753 55.000 0.00 0.00 44.24 2.66
4759 5018 1.475280 CCATCGGACCAGACGAGTTTA 59.525 52.381 0.00 0.00 44.24 2.01
4760 5019 2.479730 CCATCGGACCAGACGAGTTTAG 60.480 54.545 0.00 0.00 44.24 1.85
4761 5020 2.189594 TCGGACCAGACGAGTTTAGA 57.810 50.000 0.00 0.00 35.12 2.10
4762 5021 2.082231 TCGGACCAGACGAGTTTAGAG 58.918 52.381 0.00 0.00 35.12 2.43
4763 5022 1.132643 CGGACCAGACGAGTTTAGAGG 59.867 57.143 0.00 0.00 0.00 3.69
4764 5023 2.169330 GGACCAGACGAGTTTAGAGGT 58.831 52.381 0.00 0.00 0.00 3.85
4765 5024 2.094649 GGACCAGACGAGTTTAGAGGTG 60.095 54.545 0.00 0.00 0.00 4.00
4766 5025 1.893801 ACCAGACGAGTTTAGAGGTGG 59.106 52.381 0.00 0.00 0.00 4.61
4767 5026 1.404315 CCAGACGAGTTTAGAGGTGGC 60.404 57.143 0.00 0.00 0.00 5.01
4768 5027 0.526662 AGACGAGTTTAGAGGTGGCG 59.473 55.000 0.00 0.00 0.00 5.69
4769 5028 0.458025 GACGAGTTTAGAGGTGGCGG 60.458 60.000 0.00 0.00 0.00 6.13
4770 5029 1.810030 CGAGTTTAGAGGTGGCGGC 60.810 63.158 0.00 0.00 0.00 6.53
4809 5069 2.227757 TTGGGGGAGATTGCACGGA 61.228 57.895 0.00 0.00 0.00 4.69
4815 5075 1.681780 GGGAGATTGCACGGATGGAAA 60.682 52.381 0.00 0.00 39.86 3.13
4859 5120 1.073964 CTCTGTCGTTGGATGCACAG 58.926 55.000 0.00 0.00 38.09 3.66
4864 5125 0.321564 TCGTTGGATGCACAGGGAAG 60.322 55.000 0.00 0.00 0.00 3.46
4865 5126 1.308069 CGTTGGATGCACAGGGAAGG 61.308 60.000 0.00 0.00 0.00 3.46
4866 5127 0.251341 GTTGGATGCACAGGGAAGGT 60.251 55.000 0.00 0.00 0.00 3.50
4915 5179 7.038659 TGTGTTTTTGAATTTCTGTAAGGGTG 58.961 34.615 0.00 0.00 0.00 4.61
4968 5232 2.158943 GGTCTTTAGCGAGTAGGGCATT 60.159 50.000 0.00 0.00 0.00 3.56
4969 5233 3.532542 GTCTTTAGCGAGTAGGGCATTT 58.467 45.455 0.00 0.00 0.00 2.32
4970 5234 3.939592 GTCTTTAGCGAGTAGGGCATTTT 59.060 43.478 0.00 0.00 0.00 1.82
4971 5235 3.938963 TCTTTAGCGAGTAGGGCATTTTG 59.061 43.478 0.00 0.00 0.00 2.44
4972 5236 2.325583 TAGCGAGTAGGGCATTTTGG 57.674 50.000 0.00 0.00 0.00 3.28
4973 5237 0.328258 AGCGAGTAGGGCATTTTGGT 59.672 50.000 0.00 0.00 0.00 3.67
4974 5238 0.451783 GCGAGTAGGGCATTTTGGTG 59.548 55.000 0.00 0.00 0.00 4.17
4975 5239 1.094785 CGAGTAGGGCATTTTGGTGG 58.905 55.000 0.00 0.00 0.00 4.61
4976 5240 1.339631 CGAGTAGGGCATTTTGGTGGA 60.340 52.381 0.00 0.00 0.00 4.02
4977 5241 2.092323 GAGTAGGGCATTTTGGTGGAC 58.908 52.381 0.00 0.00 0.00 4.02
4978 5242 0.808755 GTAGGGCATTTTGGTGGACG 59.191 55.000 0.00 0.00 0.00 4.79
4979 5243 0.693622 TAGGGCATTTTGGTGGACGA 59.306 50.000 0.00 0.00 0.00 4.20
4980 5244 0.609131 AGGGCATTTTGGTGGACGAG 60.609 55.000 0.00 0.00 0.00 4.18
4981 5245 1.212751 GGCATTTTGGTGGACGAGC 59.787 57.895 0.00 0.00 0.00 5.03
4982 5246 1.244019 GGCATTTTGGTGGACGAGCT 61.244 55.000 0.00 0.00 0.00 4.09
4983 5247 0.169009 GCATTTTGGTGGACGAGCTC 59.831 55.000 2.73 2.73 0.00 4.09
4984 5248 0.804989 CATTTTGGTGGACGAGCTCC 59.195 55.000 8.47 0.00 39.97 4.70
4990 5254 3.621225 TGGACGAGCTCCATGGAG 58.379 61.111 33.73 33.73 44.99 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 4.896829 TAGCCGGCTCCTCTCCCG 62.897 72.222 36.73 0.00 43.97 5.14
13 14 2.915137 CTAGCCGGCTCCTCTCCC 60.915 72.222 36.73 0.00 0.00 4.30
14 15 2.915137 CCTAGCCGGCTCCTCTCC 60.915 72.222 36.73 0.00 0.00 3.71
15 16 2.915137 CCCTAGCCGGCTCCTCTC 60.915 72.222 36.73 0.00 0.00 3.20
16 17 3.318922 AACCCTAGCCGGCTCCTCT 62.319 63.158 36.73 12.19 0.00 3.69
17 18 2.764547 AACCCTAGCCGGCTCCTC 60.765 66.667 36.73 0.00 0.00 3.71
18 19 3.083997 CAACCCTAGCCGGCTCCT 61.084 66.667 36.73 13.13 0.00 3.69
19 20 3.387225 GACAACCCTAGCCGGCTCC 62.387 68.421 36.73 9.14 0.00 4.70
20 21 2.187163 GACAACCCTAGCCGGCTC 59.813 66.667 36.73 12.96 0.00 4.70
21 22 2.284699 AGACAACCCTAGCCGGCT 60.285 61.111 34.85 34.85 0.00 5.52
22 23 2.187163 GAGACAACCCTAGCCGGC 59.813 66.667 21.89 21.89 0.00 6.13
23 24 1.987855 TGGAGACAACCCTAGCCGG 60.988 63.158 0.00 0.00 37.44 6.13
24 25 1.218316 GTGGAGACAACCCTAGCCG 59.782 63.158 0.00 0.00 46.06 5.52
25 26 1.218316 CGTGGAGACAACCCTAGCC 59.782 63.158 0.00 0.00 46.06 3.93
26 27 1.218316 CCGTGGAGACAACCCTAGC 59.782 63.158 0.00 0.00 46.06 3.42
27 28 0.613853 TCCCGTGGAGACAACCCTAG 60.614 60.000 0.00 0.00 46.06 3.02
28 29 1.466074 TCCCGTGGAGACAACCCTA 59.534 57.895 0.00 0.00 46.06 3.53
29 30 2.203182 TCCCGTGGAGACAACCCT 59.797 61.111 0.00 0.00 46.06 4.34
44 45 1.315690 GGTATAAAAAGGGCGGCTCC 58.684 55.000 9.56 0.00 0.00 4.70
45 46 1.674441 GTGGTATAAAAAGGGCGGCTC 59.326 52.381 9.56 0.00 0.00 4.70
46 47 1.004979 TGTGGTATAAAAAGGGCGGCT 59.995 47.619 9.56 0.00 0.00 5.52
47 48 1.404035 CTGTGGTATAAAAAGGGCGGC 59.596 52.381 0.00 0.00 0.00 6.53
48 49 2.422127 CACTGTGGTATAAAAAGGGCGG 59.578 50.000 0.00 0.00 0.00 6.13
49 50 2.159435 GCACTGTGGTATAAAAAGGGCG 60.159 50.000 10.21 0.00 0.00 6.13
50 51 2.159435 CGCACTGTGGTATAAAAAGGGC 60.159 50.000 10.21 0.00 33.87 5.19
51 52 2.159435 GCGCACTGTGGTATAAAAAGGG 60.159 50.000 10.21 0.00 0.00 3.95
52 53 2.475519 CGCGCACTGTGGTATAAAAAGG 60.476 50.000 8.75 0.00 0.00 3.11
53 54 2.413796 TCGCGCACTGTGGTATAAAAAG 59.586 45.455 8.75 0.00 0.00 2.27
54 55 2.414806 TCGCGCACTGTGGTATAAAAA 58.585 42.857 8.75 0.00 0.00 1.94
55 56 2.081725 TCGCGCACTGTGGTATAAAA 57.918 45.000 8.75 0.00 0.00 1.52
56 57 2.081725 TTCGCGCACTGTGGTATAAA 57.918 45.000 8.75 0.00 0.00 1.40
57 58 2.081725 TTTCGCGCACTGTGGTATAA 57.918 45.000 8.75 0.00 0.00 0.98
58 59 1.930503 CATTTCGCGCACTGTGGTATA 59.069 47.619 8.75 0.00 0.00 1.47
59 60 0.726827 CATTTCGCGCACTGTGGTAT 59.273 50.000 8.75 0.00 0.00 2.73
60 61 0.319986 TCATTTCGCGCACTGTGGTA 60.320 50.000 8.75 0.00 0.00 3.25
61 62 1.596752 TCATTTCGCGCACTGTGGT 60.597 52.632 8.75 0.00 0.00 4.16
62 63 1.154413 GTCATTTCGCGCACTGTGG 60.154 57.895 8.75 1.00 0.00 4.17
63 64 1.507713 CGTCATTTCGCGCACTGTG 60.508 57.895 8.75 2.76 0.00 3.66
64 65 1.218875 TTCGTCATTTCGCGCACTGT 61.219 50.000 8.75 0.00 0.00 3.55
65 66 0.110867 TTTCGTCATTTCGCGCACTG 60.111 50.000 8.75 0.00 0.00 3.66
66 67 0.584396 TTTTCGTCATTTCGCGCACT 59.416 45.000 8.75 0.00 0.00 4.40
67 68 1.314412 CATTTTCGTCATTTCGCGCAC 59.686 47.619 8.75 0.00 0.00 5.34
68 69 1.601091 CATTTTCGTCATTTCGCGCA 58.399 45.000 8.75 0.00 0.00 6.09
69 70 0.291701 GCATTTTCGTCATTTCGCGC 59.708 50.000 0.00 0.00 0.00 6.86
70 71 0.907171 GGCATTTTCGTCATTTCGCG 59.093 50.000 0.00 0.00 0.00 5.87
71 72 1.268265 GGGCATTTTCGTCATTTCGC 58.732 50.000 0.00 0.00 0.00 4.70
72 73 1.469079 GGGGGCATTTTCGTCATTTCG 60.469 52.381 0.00 0.00 0.00 3.46
73 74 1.469079 CGGGGGCATTTTCGTCATTTC 60.469 52.381 0.00 0.00 0.00 2.17
74 75 0.530288 CGGGGGCATTTTCGTCATTT 59.470 50.000 0.00 0.00 0.00 2.32
75 76 1.319614 CCGGGGGCATTTTCGTCATT 61.320 55.000 0.00 0.00 0.00 2.57
76 77 1.752694 CCGGGGGCATTTTCGTCAT 60.753 57.895 0.00 0.00 0.00 3.06
77 78 2.360600 CCGGGGGCATTTTCGTCA 60.361 61.111 0.00 0.00 0.00 4.35
91 92 2.035237 TAAATAGACTGCCCCGCCGG 62.035 60.000 0.00 0.00 0.00 6.13
92 93 0.878961 GTAAATAGACTGCCCCGCCG 60.879 60.000 0.00 0.00 0.00 6.46
93 94 0.179468 TGTAAATAGACTGCCCCGCC 59.821 55.000 0.00 0.00 0.00 6.13
94 95 1.296727 GTGTAAATAGACTGCCCCGC 58.703 55.000 0.00 0.00 0.00 6.13
95 96 1.567504 CGTGTAAATAGACTGCCCCG 58.432 55.000 0.00 0.00 0.00 5.73
96 97 1.296727 GCGTGTAAATAGACTGCCCC 58.703 55.000 0.00 0.00 0.00 5.80
97 98 0.928229 CGCGTGTAAATAGACTGCCC 59.072 55.000 0.00 0.00 0.00 5.36
98 99 0.928229 CCGCGTGTAAATAGACTGCC 59.072 55.000 4.92 0.00 0.00 4.85
99 100 1.323534 CACCGCGTGTAAATAGACTGC 59.676 52.381 4.92 0.00 0.00 4.40
100 101 1.924524 CCACCGCGTGTAAATAGACTG 59.075 52.381 4.92 0.00 0.00 3.51
101 102 1.738030 GCCACCGCGTGTAAATAGACT 60.738 52.381 4.92 0.00 0.00 3.24
102 103 0.648958 GCCACCGCGTGTAAATAGAC 59.351 55.000 4.92 0.00 0.00 2.59
103 104 0.246910 TGCCACCGCGTGTAAATAGA 59.753 50.000 4.92 0.00 38.08 1.98
104 105 0.372334 GTGCCACCGCGTGTAAATAG 59.628 55.000 4.92 0.00 38.08 1.73
105 106 1.352882 CGTGCCACCGCGTGTAAATA 61.353 55.000 4.92 0.00 39.95 1.40
106 107 2.673114 CGTGCCACCGCGTGTAAAT 61.673 57.895 4.92 0.00 39.95 1.40
107 108 3.339464 CGTGCCACCGCGTGTAAA 61.339 61.111 4.92 0.00 39.95 2.01
126 127 4.038080 GAACAGTTTGCGCCCCGG 62.038 66.667 4.18 0.00 0.00 5.73
127 128 2.141122 AATGAACAGTTTGCGCCCCG 62.141 55.000 4.18 0.00 0.00 5.73
128 129 0.885196 TAATGAACAGTTTGCGCCCC 59.115 50.000 4.18 0.00 0.00 5.80
129 130 1.727857 CGTAATGAACAGTTTGCGCCC 60.728 52.381 4.18 0.00 0.00 6.13
130 131 1.195900 TCGTAATGAACAGTTTGCGCC 59.804 47.619 4.18 0.00 32.12 6.53
131 132 2.495939 CTCGTAATGAACAGTTTGCGC 58.504 47.619 0.00 0.00 32.12 6.09
132 133 2.495939 GCTCGTAATGAACAGTTTGCG 58.504 47.619 0.00 0.00 33.13 4.85
133 134 2.096417 ACGCTCGTAATGAACAGTTTGC 60.096 45.455 0.00 0.00 0.00 3.68
134 135 3.428870 AGACGCTCGTAATGAACAGTTTG 59.571 43.478 0.00 0.00 0.00 2.93
135 136 3.650139 AGACGCTCGTAATGAACAGTTT 58.350 40.909 0.00 0.00 0.00 2.66
136 137 3.243336 GAGACGCTCGTAATGAACAGTT 58.757 45.455 0.00 0.00 0.00 3.16
137 138 2.864968 GAGACGCTCGTAATGAACAGT 58.135 47.619 0.00 0.00 0.00 3.55
149 150 3.179992 GTCGGATAAAAATCGAGACGCTC 59.820 47.826 0.00 0.00 33.41 5.03
150 151 3.114065 GTCGGATAAAAATCGAGACGCT 58.886 45.455 0.00 0.00 33.41 5.07
151 152 2.098021 CGTCGGATAAAAATCGAGACGC 60.098 50.000 16.22 0.00 41.47 5.19
152 153 2.466571 CCGTCGGATAAAAATCGAGACG 59.533 50.000 4.91 19.09 44.24 4.18
153 154 2.218075 GCCGTCGGATAAAAATCGAGAC 59.782 50.000 17.49 0.00 33.41 3.36
154 155 2.466846 GCCGTCGGATAAAAATCGAGA 58.533 47.619 17.49 0.00 33.41 4.04
155 156 1.525619 GGCCGTCGGATAAAAATCGAG 59.474 52.381 17.49 0.00 33.41 4.04
156 157 1.574134 GGCCGTCGGATAAAAATCGA 58.426 50.000 17.49 0.00 0.00 3.59
157 158 0.231279 CGGCCGTCGGATAAAAATCG 59.769 55.000 19.50 1.25 34.75 3.34
158 159 1.525619 CTCGGCCGTCGGATAAAAATC 59.474 52.381 27.15 0.00 39.77 2.17
159 160 1.578583 CTCGGCCGTCGGATAAAAAT 58.421 50.000 27.15 0.00 39.77 1.82
160 161 0.460635 CCTCGGCCGTCGGATAAAAA 60.461 55.000 27.15 0.00 39.77 1.94
161 162 1.142314 CCTCGGCCGTCGGATAAAA 59.858 57.895 27.15 0.17 39.77 1.52
162 163 2.788640 CCCTCGGCCGTCGGATAAA 61.789 63.158 29.24 8.13 39.77 1.40
163 164 3.221389 CCCTCGGCCGTCGGATAA 61.221 66.667 29.24 8.85 39.77 1.75
182 183 0.806492 GTCCAATCTCGCTCCGGAAC 60.806 60.000 5.23 0.00 0.00 3.62
183 184 1.515954 GTCCAATCTCGCTCCGGAA 59.484 57.895 5.23 0.00 0.00 4.30
184 185 2.771639 CGTCCAATCTCGCTCCGGA 61.772 63.158 2.93 2.93 0.00 5.14
185 186 2.278857 CGTCCAATCTCGCTCCGG 60.279 66.667 0.00 0.00 0.00 5.14
186 187 2.278857 CCGTCCAATCTCGCTCCG 60.279 66.667 0.00 0.00 0.00 4.63
187 188 1.227002 GACCGTCCAATCTCGCTCC 60.227 63.158 0.00 0.00 0.00 4.70
188 189 1.022735 TAGACCGTCCAATCTCGCTC 58.977 55.000 0.00 0.00 0.00 5.03
189 190 1.471119 TTAGACCGTCCAATCTCGCT 58.529 50.000 0.00 0.00 0.00 4.93
190 191 2.288961 TTTAGACCGTCCAATCTCGC 57.711 50.000 0.00 0.00 0.00 5.03
191 192 3.043586 CGATTTAGACCGTCCAATCTCG 58.956 50.000 14.72 7.97 0.00 4.04
192 193 2.795470 GCGATTTAGACCGTCCAATCTC 59.205 50.000 14.72 7.13 0.00 2.75
193 194 2.167693 TGCGATTTAGACCGTCCAATCT 59.832 45.455 14.72 0.00 0.00 2.40
194 195 2.284417 GTGCGATTTAGACCGTCCAATC 59.716 50.000 9.60 9.60 0.00 2.67
195 196 2.277084 GTGCGATTTAGACCGTCCAAT 58.723 47.619 0.00 0.00 0.00 3.16
196 197 1.673626 GGTGCGATTTAGACCGTCCAA 60.674 52.381 0.00 0.00 0.00 3.53
197 198 0.108520 GGTGCGATTTAGACCGTCCA 60.109 55.000 0.00 0.00 0.00 4.02
198 199 0.108520 TGGTGCGATTTAGACCGTCC 60.109 55.000 0.00 0.00 31.87 4.79
199 200 1.659098 CTTGGTGCGATTTAGACCGTC 59.341 52.381 0.00 0.00 31.87 4.79
200 201 1.001633 ACTTGGTGCGATTTAGACCGT 59.998 47.619 0.00 0.00 31.87 4.83
201 202 1.722011 ACTTGGTGCGATTTAGACCG 58.278 50.000 0.00 0.00 31.87 4.79
202 203 4.435121 CGTTTACTTGGTGCGATTTAGACC 60.435 45.833 0.00 0.00 0.00 3.85
203 204 4.386652 TCGTTTACTTGGTGCGATTTAGAC 59.613 41.667 0.00 0.00 0.00 2.59
204 205 4.558178 TCGTTTACTTGGTGCGATTTAGA 58.442 39.130 0.00 0.00 0.00 2.10
205 206 4.914312 TCGTTTACTTGGTGCGATTTAG 57.086 40.909 0.00 0.00 0.00 1.85
206 207 4.330620 GGATCGTTTACTTGGTGCGATTTA 59.669 41.667 0.00 0.00 41.50 1.40
207 208 3.126343 GGATCGTTTACTTGGTGCGATTT 59.874 43.478 0.00 0.00 41.50 2.17
208 209 2.676342 GGATCGTTTACTTGGTGCGATT 59.324 45.455 0.00 0.00 41.50 3.34
209 210 2.277084 GGATCGTTTACTTGGTGCGAT 58.723 47.619 0.00 0.00 43.65 4.58
210 211 1.717194 GGATCGTTTACTTGGTGCGA 58.283 50.000 0.00 0.00 36.02 5.10
211 212 0.368907 CGGATCGTTTACTTGGTGCG 59.631 55.000 0.00 0.00 0.00 5.34
212 213 1.392510 GTCGGATCGTTTACTTGGTGC 59.607 52.381 0.00 0.00 0.00 5.01
213 214 1.652124 CGTCGGATCGTTTACTTGGTG 59.348 52.381 0.00 0.00 0.00 4.17
214 215 1.403249 CCGTCGGATCGTTTACTTGGT 60.403 52.381 4.91 0.00 0.00 3.67
215 216 1.274596 CCGTCGGATCGTTTACTTGG 58.725 55.000 4.91 0.00 0.00 3.61
216 217 0.643820 GCCGTCGGATCGTTTACTTG 59.356 55.000 17.49 0.00 0.00 3.16
217 218 0.459063 GGCCGTCGGATCGTTTACTT 60.459 55.000 17.49 0.00 0.00 2.24
218 219 1.140375 GGCCGTCGGATCGTTTACT 59.860 57.895 17.49 0.00 0.00 2.24
219 220 1.879884 GGGCCGTCGGATCGTTTAC 60.880 63.158 17.49 0.00 0.00 2.01
220 221 2.287457 CTGGGCCGTCGGATCGTTTA 62.287 60.000 17.49 0.00 0.00 2.01
221 222 3.659089 CTGGGCCGTCGGATCGTTT 62.659 63.158 17.49 0.00 0.00 3.60
222 223 4.143333 CTGGGCCGTCGGATCGTT 62.143 66.667 17.49 0.00 0.00 3.85
224 225 3.774959 CTTCTGGGCCGTCGGATCG 62.775 68.421 17.49 0.00 0.00 3.69
225 226 2.107141 CTTCTGGGCCGTCGGATC 59.893 66.667 17.49 6.39 0.00 3.36
226 227 4.162690 GCTTCTGGGCCGTCGGAT 62.163 66.667 17.49 0.00 0.00 4.18
234 235 3.068729 GCGATTTGGGCTTCTGGGC 62.069 63.158 0.00 0.00 40.05 5.36
235 236 1.379044 AGCGATTTGGGCTTCTGGG 60.379 57.895 0.00 0.00 37.50 4.45
236 237 0.677731 TCAGCGATTTGGGCTTCTGG 60.678 55.000 0.00 0.00 39.08 3.86
237 238 0.731417 CTCAGCGATTTGGGCTTCTG 59.269 55.000 0.00 0.00 39.08 3.02
238 239 0.615331 TCTCAGCGATTTGGGCTTCT 59.385 50.000 0.00 0.00 39.08 2.85
239 240 1.012841 CTCTCAGCGATTTGGGCTTC 58.987 55.000 0.00 0.00 39.08 3.86
240 241 0.615331 TCTCTCAGCGATTTGGGCTT 59.385 50.000 0.00 0.00 39.08 4.35
241 242 0.177604 CTCTCTCAGCGATTTGGGCT 59.822 55.000 0.00 0.00 42.61 5.19
242 243 1.435408 GCTCTCTCAGCGATTTGGGC 61.435 60.000 0.00 0.00 38.76 5.36
243 244 2.687842 GCTCTCTCAGCGATTTGGG 58.312 57.895 0.00 0.00 38.76 4.12
260 261 1.062845 GACGAGTCGAGCTACCAGC 59.937 63.158 21.50 0.00 42.84 4.85
261 262 0.653636 GAGACGAGTCGAGCTACCAG 59.346 60.000 21.50 0.00 34.09 4.00
262 263 0.036671 TGAGACGAGTCGAGCTACCA 60.037 55.000 21.50 8.26 34.09 3.25
263 264 1.262151 GATGAGACGAGTCGAGCTACC 59.738 57.143 21.50 5.84 34.09 3.18
264 265 2.206750 AGATGAGACGAGTCGAGCTAC 58.793 52.381 21.50 10.39 34.09 3.58
265 266 2.605837 AGATGAGACGAGTCGAGCTA 57.394 50.000 21.50 3.12 34.09 3.32
266 267 1.745232 AAGATGAGACGAGTCGAGCT 58.255 50.000 21.50 15.59 34.09 4.09
267 268 2.096819 AGAAAGATGAGACGAGTCGAGC 59.903 50.000 21.50 10.74 34.09 5.03
268 269 3.486708 CCAGAAAGATGAGACGAGTCGAG 60.487 52.174 21.50 0.00 34.09 4.04
269 270 2.420372 CCAGAAAGATGAGACGAGTCGA 59.580 50.000 21.50 0.00 34.09 4.20
270 271 2.420372 TCCAGAAAGATGAGACGAGTCG 59.580 50.000 11.85 11.85 34.09 4.18
271 272 4.142271 ACATCCAGAAAGATGAGACGAGTC 60.142 45.833 8.44 0.00 45.43 3.36
272 273 3.766591 ACATCCAGAAAGATGAGACGAGT 59.233 43.478 8.44 0.00 45.43 4.18
273 274 4.111198 CACATCCAGAAAGATGAGACGAG 58.889 47.826 8.44 0.00 45.43 4.18
274 275 3.763897 TCACATCCAGAAAGATGAGACGA 59.236 43.478 8.44 0.00 45.43 4.20
275 276 4.115401 TCACATCCAGAAAGATGAGACG 57.885 45.455 8.44 0.00 45.43 4.18
277 278 3.118992 CGGTCACATCCAGAAAGATGAGA 60.119 47.826 8.44 3.34 45.43 3.27
278 279 3.118992 TCGGTCACATCCAGAAAGATGAG 60.119 47.826 8.44 0.97 45.43 2.90
279 280 2.831526 TCGGTCACATCCAGAAAGATGA 59.168 45.455 8.44 0.00 45.43 2.92
281 282 2.417379 CGTCGGTCACATCCAGAAAGAT 60.417 50.000 0.00 0.00 0.00 2.40
282 283 1.067846 CGTCGGTCACATCCAGAAAGA 60.068 52.381 0.00 0.00 0.00 2.52
283 284 1.336887 ACGTCGGTCACATCCAGAAAG 60.337 52.381 0.00 0.00 0.00 2.62
284 285 0.677288 ACGTCGGTCACATCCAGAAA 59.323 50.000 0.00 0.00 0.00 2.52
285 286 0.677288 AACGTCGGTCACATCCAGAA 59.323 50.000 0.00 0.00 0.00 3.02
286 287 0.038618 CAACGTCGGTCACATCCAGA 60.039 55.000 0.00 0.00 0.00 3.86
287 288 0.038618 TCAACGTCGGTCACATCCAG 60.039 55.000 0.00 0.00 0.00 3.86
288 289 0.606096 ATCAACGTCGGTCACATCCA 59.394 50.000 0.00 0.00 0.00 3.41
289 290 0.999406 CATCAACGTCGGTCACATCC 59.001 55.000 0.00 0.00 0.00 3.51
290 291 0.370273 GCATCAACGTCGGTCACATC 59.630 55.000 0.00 0.00 0.00 3.06
291 292 0.320334 TGCATCAACGTCGGTCACAT 60.320 50.000 0.00 0.00 0.00 3.21
292 293 0.943835 CTGCATCAACGTCGGTCACA 60.944 55.000 0.00 0.00 0.00 3.58
293 294 0.666274 TCTGCATCAACGTCGGTCAC 60.666 55.000 0.00 0.00 0.00 3.67
294 295 0.246360 ATCTGCATCAACGTCGGTCA 59.754 50.000 0.00 0.00 0.00 4.02
295 296 0.647410 CATCTGCATCAACGTCGGTC 59.353 55.000 0.00 0.00 0.00 4.79
296 297 0.740868 CCATCTGCATCAACGTCGGT 60.741 55.000 0.00 0.00 0.00 4.69
297 298 0.460109 TCCATCTGCATCAACGTCGG 60.460 55.000 0.00 0.00 0.00 4.79
298 299 1.259770 CATCCATCTGCATCAACGTCG 59.740 52.381 0.00 0.00 0.00 5.12
299 300 2.554142 TCATCCATCTGCATCAACGTC 58.446 47.619 0.00 0.00 0.00 4.34
300 301 2.696989 TCATCCATCTGCATCAACGT 57.303 45.000 0.00 0.00 0.00 3.99
301 302 4.534168 GAATTCATCCATCTGCATCAACG 58.466 43.478 0.00 0.00 0.00 4.10
302 303 4.534168 CGAATTCATCCATCTGCATCAAC 58.466 43.478 6.22 0.00 0.00 3.18
303 304 3.004002 GCGAATTCATCCATCTGCATCAA 59.996 43.478 6.22 0.00 0.00 2.57
304 305 2.551032 GCGAATTCATCCATCTGCATCA 59.449 45.455 6.22 0.00 0.00 3.07
305 306 2.812591 AGCGAATTCATCCATCTGCATC 59.187 45.455 6.22 0.00 0.00 3.91
306 307 2.860009 AGCGAATTCATCCATCTGCAT 58.140 42.857 6.22 0.00 0.00 3.96
307 308 2.336945 AGCGAATTCATCCATCTGCA 57.663 45.000 6.22 0.00 0.00 4.41
308 309 3.369385 CAAAGCGAATTCATCCATCTGC 58.631 45.455 6.22 0.00 0.00 4.26
309 310 3.066342 AGCAAAGCGAATTCATCCATCTG 59.934 43.478 6.22 0.00 0.00 2.90
310 311 3.066342 CAGCAAAGCGAATTCATCCATCT 59.934 43.478 6.22 0.00 0.00 2.90
311 312 3.369385 CAGCAAAGCGAATTCATCCATC 58.631 45.455 6.22 0.00 0.00 3.51
312 313 2.480759 GCAGCAAAGCGAATTCATCCAT 60.481 45.455 6.22 0.00 0.00 3.41
313 314 1.135315 GCAGCAAAGCGAATTCATCCA 60.135 47.619 6.22 0.00 0.00 3.41
314 315 1.133790 AGCAGCAAAGCGAATTCATCC 59.866 47.619 6.22 0.00 40.15 3.51
315 316 2.097142 AGAGCAGCAAAGCGAATTCATC 59.903 45.455 6.22 0.00 40.15 2.92
316 317 2.089980 AGAGCAGCAAAGCGAATTCAT 58.910 42.857 6.22 0.00 40.15 2.57
317 318 1.466167 GAGAGCAGCAAAGCGAATTCA 59.534 47.619 6.22 0.00 40.15 2.57
318 319 1.528603 CGAGAGCAGCAAAGCGAATTC 60.529 52.381 0.00 0.00 40.15 2.17
319 320 0.445436 CGAGAGCAGCAAAGCGAATT 59.555 50.000 0.00 0.00 40.15 2.17
320 321 2.084844 CGAGAGCAGCAAAGCGAAT 58.915 52.632 0.00 0.00 40.15 3.34
321 322 3.554232 CGAGAGCAGCAAAGCGAA 58.446 55.556 0.00 0.00 40.15 4.70
333 334 2.202676 GTTGCCGGAGAGCGAGAG 60.203 66.667 5.05 0.00 34.65 3.20
334 335 2.989253 TGTTGCCGGAGAGCGAGA 60.989 61.111 5.05 0.00 34.65 4.04
335 336 2.811317 GTGTTGCCGGAGAGCGAG 60.811 66.667 5.05 0.00 34.65 5.03
336 337 3.158537 TTGTGTTGCCGGAGAGCGA 62.159 57.895 5.05 0.00 34.65 4.93
351 352 1.238439 CAGAGACGGCCAAATGTTGT 58.762 50.000 2.24 0.00 0.00 3.32
371 372 4.970003 GGTTTTGATTATCATCGGAAAGCG 59.030 41.667 0.00 0.00 31.54 4.68
372 373 5.281727 GGGTTTTGATTATCATCGGAAAGC 58.718 41.667 9.48 9.48 36.16 3.51
376 377 4.511786 TGGGGTTTTGATTATCATCGGA 57.488 40.909 0.00 0.00 31.08 4.55
446 452 2.476534 CTTTGCGCGGACTTGGCATT 62.477 55.000 8.83 0.00 36.44 3.56
463 469 3.645975 CGCGCGTGGTTTCACCTT 61.646 61.111 24.19 0.00 39.58 3.50
489 495 3.865929 CTCGTGACGTGGCTTGCCT 62.866 63.158 13.18 0.00 0.00 4.75
514 520 2.203538 CCCCACAAGGCAGTTGCT 60.204 61.111 3.88 0.00 40.15 3.91
537 543 1.002134 CCACGTTGGCTCCAGGAAT 60.002 57.895 0.00 0.00 0.00 3.01
538 544 2.429930 CCACGTTGGCTCCAGGAA 59.570 61.111 0.00 0.00 0.00 3.36
557 563 3.906720 TGACTAAGGACCTAACATGCC 57.093 47.619 0.00 0.00 0.00 4.40
561 567 5.790593 GTCATGTTGACTAAGGACCTAACA 58.209 41.667 8.81 8.81 43.73 2.41
571 577 8.162103 TGGATGTTCCCTGTCATGTTGACTAA 62.162 42.308 8.91 0.00 41.02 2.24
573 579 6.038166 TGGATGTTCCCTGTCATGTTGACT 62.038 45.833 8.91 0.00 41.02 3.41
578 584 2.092212 GGATGGATGTTCCCTGTCATGT 60.092 50.000 0.00 0.00 35.03 3.21
610 616 2.283173 GGCAAGGGAAGGTGGGTG 60.283 66.667 0.00 0.00 0.00 4.61
623 629 0.603569 GGAGACGACTGAGAAGGCAA 59.396 55.000 0.00 0.00 0.00 4.52
624 630 0.251386 AGGAGACGACTGAGAAGGCA 60.251 55.000 0.00 0.00 0.00 4.75
625 631 0.892063 AAGGAGACGACTGAGAAGGC 59.108 55.000 0.00 0.00 0.00 4.35
626 632 1.474879 GGAAGGAGACGACTGAGAAGG 59.525 57.143 0.00 0.00 0.00 3.46
627 633 2.422127 GAGGAAGGAGACGACTGAGAAG 59.578 54.545 0.00 0.00 0.00 2.85
628 634 2.438411 GAGGAAGGAGACGACTGAGAA 58.562 52.381 0.00 0.00 0.00 2.87
629 635 1.676314 CGAGGAAGGAGACGACTGAGA 60.676 57.143 0.00 0.00 0.00 3.27
630 636 0.730265 CGAGGAAGGAGACGACTGAG 59.270 60.000 0.00 0.00 0.00 3.35
631 637 0.677098 CCGAGGAAGGAGACGACTGA 60.677 60.000 0.00 0.00 0.00 3.41
632 638 0.961358 ACCGAGGAAGGAGACGACTG 60.961 60.000 0.00 0.00 34.73 3.51
633 639 0.677414 GACCGAGGAAGGAGACGACT 60.677 60.000 0.00 0.00 34.73 4.18
634 640 1.655885 GGACCGAGGAAGGAGACGAC 61.656 65.000 0.00 0.00 34.73 4.34
635 641 1.378250 GGACCGAGGAAGGAGACGA 60.378 63.158 0.00 0.00 34.73 4.20
651 657 2.897969 AGCTAAGTTCGAACAGGAAGGA 59.102 45.455 28.78 5.94 0.00 3.36
652 658 3.320673 AGCTAAGTTCGAACAGGAAGG 57.679 47.619 28.78 13.45 0.00 3.46
669 675 2.720134 GCTCTCGCTGGAGGAAGCT 61.720 63.158 5.24 0.00 41.24 3.74
711 722 1.302033 CTGGTGGTGAGTGACCTGC 60.302 63.158 0.00 0.00 46.32 4.85
725 736 1.202651 ACACGCTGAAAACTAGCTGGT 60.203 47.619 0.00 0.00 39.00 4.00
728 739 2.408050 CTGACACGCTGAAAACTAGCT 58.592 47.619 0.00 0.00 39.00 3.32
729 740 1.136224 GCTGACACGCTGAAAACTAGC 60.136 52.381 0.00 0.00 37.80 3.42
730 741 2.408050 AGCTGACACGCTGAAAACTAG 58.592 47.619 0.00 0.00 39.16 2.57
731 742 2.526304 AGCTGACACGCTGAAAACTA 57.474 45.000 0.00 0.00 39.16 2.24
732 743 3.386543 AGCTGACACGCTGAAAACT 57.613 47.368 0.00 0.00 39.16 2.66
774 793 0.688087 GGATTCCGGGGACTGACTCT 60.688 60.000 0.00 0.00 36.31 3.24
829 848 1.372087 CCCGGTGCTTGATTCAGAGC 61.372 60.000 0.00 11.53 39.33 4.09
853 872 3.274288 GAGGAATCACACCAGATCCAAC 58.726 50.000 0.00 0.00 0.00 3.77
855 874 1.482182 CGAGGAATCACACCAGATCCA 59.518 52.381 0.00 0.00 0.00 3.41
931 950 2.586357 GATCTGCGAGCCGGTTCC 60.586 66.667 13.19 6.29 0.00 3.62
951 970 2.666098 ATTCGGCAACTACCCGGCT 61.666 57.895 0.00 0.00 45.60 5.52
961 980 4.855105 CGATCTCCCATTCGGCAA 57.145 55.556 0.00 0.00 0.00 4.52
1119 1138 2.970639 CTCTCGAAAGACGGGCCA 59.029 61.111 4.39 0.00 42.91 5.36
1377 1396 0.816373 GGTACTCGGTGTTCCTCCTC 59.184 60.000 0.00 0.00 33.87 3.71
1449 1468 4.385405 AGCCACTCCAGCACGCTC 62.385 66.667 0.00 0.00 0.00 5.03
1623 1642 4.248859 CACTGAGGTCGAATGACTCAAAT 58.751 43.478 10.34 2.00 44.83 2.32
1722 1741 6.166984 TCCATCTTATCGAGCTTGAGAATT 57.833 37.500 11.39 0.39 0.00 2.17
1777 1796 5.680594 TGCCCTGAATTGAAAATAAGCAT 57.319 34.783 0.00 0.00 0.00 3.79
1800 1819 0.482446 ATTTGCTGGGAGTCCACCAA 59.518 50.000 12.30 7.82 36.97 3.67
1846 1865 6.294675 CCACAAACAAAAGATGCTCAGGATTA 60.295 38.462 0.00 0.00 0.00 1.75
1945 1964 3.685756 ACCGTTTTTGTTTCGAGAACAGA 59.314 39.130 11.25 6.49 0.00 3.41
1966 1985 5.608449 AGGTTGGTTTGTCTGTAAGTCTAC 58.392 41.667 0.00 0.00 33.76 2.59
2119 2138 1.496060 TTGCTATCCGTCCTGGTCAT 58.504 50.000 0.00 0.00 39.52 3.06
2130 2149 3.942115 GACCCTCAGAAGTTTTGCTATCC 59.058 47.826 0.00 0.00 0.00 2.59
2145 2167 6.361433 TGTTTTTCTCTATTTGTGACCCTCA 58.639 36.000 0.00 0.00 0.00 3.86
2162 2184 3.787785 ACAATCCGGTGGTTTGTTTTTC 58.212 40.909 0.00 0.00 41.19 2.29
2172 2194 4.909696 TTGCAATAATACAATCCGGTGG 57.090 40.909 0.00 0.00 0.00 4.61
2184 2206 8.101654 TGGTACGAAGTTAACTTTGCAATAAT 57.898 30.769 28.30 14.71 37.78 1.28
2196 2218 7.538575 GGTAACTAGACATGGTACGAAGTTAA 58.461 38.462 0.00 0.00 37.78 2.01
2204 2226 5.163478 ACAATCCGGTAACTAGACATGGTAC 60.163 44.000 0.00 0.00 0.00 3.34
2211 2233 4.142315 TGCAGTACAATCCGGTAACTAGAC 60.142 45.833 0.00 0.00 0.00 2.59
2216 2238 3.749609 ACTTTGCAGTACAATCCGGTAAC 59.250 43.478 0.00 0.00 38.31 2.50
2253 2275 7.604164 TGCTTTGACCTCAAGAAATAACTAGAG 59.396 37.037 0.00 0.00 37.15 2.43
2257 2279 6.321181 TGTTGCTTTGACCTCAAGAAATAACT 59.679 34.615 0.00 0.00 37.15 2.24
2353 2375 0.771127 TGCCTAACCAGCAACCTTCT 59.229 50.000 0.00 0.00 37.28 2.85
2367 2389 1.561076 TCCCGTAGTGAGTAGTGCCTA 59.439 52.381 0.00 0.00 0.00 3.93
2375 2397 4.525487 TCAAAACATACTCCCGTAGTGAGT 59.475 41.667 0.00 0.00 44.85 3.41
2413 2435 6.797707 AGGAAATAATCTGGTATGGATGCAT 58.202 36.000 4.68 4.68 0.00 3.96
2454 2476 0.678950 AACATGAAAAACAGGGCCCG 59.321 50.000 18.44 14.39 34.35 6.13
2455 2477 2.158827 ACAAACATGAAAAACAGGGCCC 60.159 45.455 16.46 16.46 34.35 5.80
2468 2490 5.733226 TGTGGCGATATCTTACAAACATG 57.267 39.130 0.34 0.00 0.00 3.21
2515 2537 2.421619 GCCAGTCATAGCAGGCTTATC 58.578 52.381 0.00 0.00 43.70 1.75
2661 2683 7.172342 ACACATACTAAGACCAGGCAATAAAA 58.828 34.615 0.00 0.00 0.00 1.52
2664 2686 5.950544 ACACATACTAAGACCAGGCAATA 57.049 39.130 0.00 0.00 0.00 1.90
2669 2691 4.819105 TCCAACACATACTAAGACCAGG 57.181 45.455 0.00 0.00 0.00 4.45
2782 2808 3.223674 ACCCCTGTTGTAAAGACCAAG 57.776 47.619 0.00 0.00 0.00 3.61
2967 2993 3.507233 GGGAAAGAATTCAGTGCATGTGA 59.493 43.478 8.44 0.00 37.29 3.58
2973 2999 7.992754 ATATATCAGGGAAAGAATTCAGTGC 57.007 36.000 8.44 0.00 37.29 4.40
3015 3042 8.414778 ACTGTGGCTAGTCTTATAATGAAGTAC 58.585 37.037 0.00 0.00 0.00 2.73
3027 3054 4.130118 CTGTTCAAACTGTGGCTAGTCTT 58.870 43.478 0.00 0.00 0.00 3.01
3029 3056 3.728845 TCTGTTCAAACTGTGGCTAGTC 58.271 45.455 0.00 0.00 0.00 2.59
3030 3057 3.838244 TCTGTTCAAACTGTGGCTAGT 57.162 42.857 0.00 0.00 0.00 2.57
3037 3064 5.531287 GGATTACACCTTCTGTTCAAACTGT 59.469 40.000 0.00 0.00 33.91 3.55
3038 3065 5.048713 GGGATTACACCTTCTGTTCAAACTG 60.049 44.000 0.00 0.00 33.91 3.16
3039 3066 5.070685 GGGATTACACCTTCTGTTCAAACT 58.929 41.667 0.00 0.00 33.91 2.66
3040 3067 4.825085 TGGGATTACACCTTCTGTTCAAAC 59.175 41.667 0.00 0.00 33.91 2.93
3048 3075 6.158695 ACAATCATAGTGGGATTACACCTTCT 59.841 38.462 0.00 0.00 42.28 2.85
3063 3090 3.517100 AGTCTGTGCTCCACAATCATAGT 59.483 43.478 0.00 0.00 44.08 2.12
3078 3105 8.592155 CAAATGATATTTTGCATGAAGTCTGTG 58.408 33.333 0.00 0.00 30.51 3.66
3132 3159 6.808008 TCAAGCCACTGAAAATAAGAAGAG 57.192 37.500 0.00 0.00 0.00 2.85
3211 3238 8.594550 GCAAGTATATCCCTAAATTCACTCCTA 58.405 37.037 0.00 0.00 0.00 2.94
3424 3451 3.819564 TCATGGATAAGGAACTCACCG 57.180 47.619 0.00 0.00 38.49 4.94
3433 3460 8.790718 CAGGAAAGAATGTTATCATGGATAAGG 58.209 37.037 0.00 0.00 35.54 2.69
3496 3523 8.981647 GCTTGCAAAAACATCTTATATTATGGG 58.018 33.333 0.00 0.00 0.00 4.00
3497 3524 9.754382 AGCTTGCAAAAACATCTTATATTATGG 57.246 29.630 0.00 0.00 0.00 2.74
3504 3531 9.846248 CTAGTTTAGCTTGCAAAAACATCTTAT 57.154 29.630 21.30 7.46 35.93 1.73
3522 3549 5.748592 AGACGTTTTTGCAAGCTAGTTTAG 58.251 37.500 0.00 0.00 0.00 1.85
3523 3550 5.744666 AGACGTTTTTGCAAGCTAGTTTA 57.255 34.783 0.00 0.00 0.00 2.01
3524 3551 4.632538 AGACGTTTTTGCAAGCTAGTTT 57.367 36.364 0.00 0.00 0.00 2.66
3525 3552 4.632538 AAGACGTTTTTGCAAGCTAGTT 57.367 36.364 0.00 0.00 0.00 2.24
3526 3553 4.573201 TGTAAGACGTTTTTGCAAGCTAGT 59.427 37.500 0.00 0.00 0.00 2.57
3527 3554 5.090652 TGTAAGACGTTTTTGCAAGCTAG 57.909 39.130 0.00 0.00 0.00 3.42
3528 3555 5.682943 ATGTAAGACGTTTTTGCAAGCTA 57.317 34.783 0.00 0.00 0.00 3.32
3529 3556 4.568152 ATGTAAGACGTTTTTGCAAGCT 57.432 36.364 0.00 0.00 0.00 3.74
3530 3557 4.502645 ACAATGTAAGACGTTTTTGCAAGC 59.497 37.500 0.00 0.00 0.00 4.01
3531 3558 5.051774 CCACAATGTAAGACGTTTTTGCAAG 60.052 40.000 0.00 2.28 0.00 4.01
3532 3559 4.800993 CCACAATGTAAGACGTTTTTGCAA 59.199 37.500 0.00 0.00 0.00 4.08
3533 3560 4.355437 CCACAATGTAAGACGTTTTTGCA 58.645 39.130 0.00 1.87 0.00 4.08
3534 3561 3.733727 CCCACAATGTAAGACGTTTTTGC 59.266 43.478 0.00 0.00 0.00 3.68
3535 3562 4.973663 GTCCCACAATGTAAGACGTTTTTG 59.026 41.667 0.00 0.00 0.00 2.44
3536 3563 4.260866 CGTCCCACAATGTAAGACGTTTTT 60.261 41.667 21.67 0.00 43.89 1.94
3537 3564 3.249080 CGTCCCACAATGTAAGACGTTTT 59.751 43.478 21.67 0.00 43.89 2.43
3538 3565 2.803956 CGTCCCACAATGTAAGACGTTT 59.196 45.455 21.67 0.00 43.89 3.60
3539 3566 2.409975 CGTCCCACAATGTAAGACGTT 58.590 47.619 21.67 0.00 43.89 3.99
3540 3567 1.337447 CCGTCCCACAATGTAAGACGT 60.337 52.381 25.28 0.00 46.62 4.34
3545 3572 0.616371 CCCTCCGTCCCACAATGTAA 59.384 55.000 0.00 0.00 0.00 2.41
3547 3574 1.537889 TCCCTCCGTCCCACAATGT 60.538 57.895 0.00 0.00 0.00 2.71
3548 3575 1.221840 CTCCCTCCGTCCCACAATG 59.778 63.158 0.00 0.00 0.00 2.82
3552 3579 2.056815 GGTACTCCCTCCGTCCCAC 61.057 68.421 0.00 0.00 0.00 4.61
3556 3583 2.022934 CTACAAGGTACTCCCTCCGTC 58.977 57.143 0.00 0.00 45.47 4.79
3562 3589 5.479124 TTTCTTCACTACAAGGTACTCCC 57.521 43.478 0.00 0.00 38.49 4.30
3601 3631 4.604843 TGCAAGCAGAAACAAGATATCG 57.395 40.909 0.00 0.00 0.00 2.92
3626 3656 4.021981 CAGGGTTCAAGAAATTCCAGGTTC 60.022 45.833 0.00 0.00 0.00 3.62
3635 3665 7.867921 TGGTATGTATACAGGGTTCAAGAAAT 58.132 34.615 11.91 0.00 34.98 2.17
3680 3710 1.202817 TGACGCACAGCTACCGAATAA 59.797 47.619 6.81 0.00 0.00 1.40
3703 3737 8.044060 TGATCCTACACAATTTTAAAGCTCAG 57.956 34.615 0.00 0.00 0.00 3.35
3741 3775 1.405526 GGTGAGTCTCGGCTATTGCAA 60.406 52.381 0.00 0.00 41.91 4.08
3749 3783 0.103208 CCATACAGGTGAGTCTCGGC 59.897 60.000 0.00 0.00 0.00 5.54
3751 3785 0.817654 TGCCATACAGGTGAGTCTCG 59.182 55.000 0.00 0.00 40.61 4.04
3766 3800 0.395448 TGCCGAATTCATCCATGCCA 60.395 50.000 6.22 0.00 0.00 4.92
3767 3801 0.963962 ATGCCGAATTCATCCATGCC 59.036 50.000 6.22 0.00 0.00 4.40
3769 3803 6.492254 CATATGTATGCCGAATTCATCCATG 58.508 40.000 6.22 0.00 29.87 3.66
3770 3804 6.688637 CATATGTATGCCGAATTCATCCAT 57.311 37.500 6.22 6.94 29.87 3.41
3788 3822 4.406648 TGGTCCAGTACTTGAGCATATG 57.593 45.455 21.23 0.00 34.34 1.78
3805 3839 4.560427 GGATAACTTCGTAACGAGTTGGTC 59.440 45.833 10.82 9.01 37.14 4.02
3807 3841 4.487948 TGGATAACTTCGTAACGAGTTGG 58.512 43.478 10.82 0.00 37.14 3.77
3814 3848 6.985059 AGGCTTATTCTGGATAACTTCGTAAC 59.015 38.462 0.00 0.00 0.00 2.50
3864 3898 6.147821 CCGCTTTCTGTACCATATTCATTAGG 59.852 42.308 0.00 0.00 0.00 2.69
3895 3929 7.545489 AGAATTTCCAGAATCAGCTGAAAATC 58.455 34.615 22.50 18.41 32.61 2.17
3897 3931 6.491062 TGAGAATTTCCAGAATCAGCTGAAAA 59.509 34.615 22.50 15.49 38.14 2.29
3898 3932 6.005823 TGAGAATTTCCAGAATCAGCTGAAA 58.994 36.000 22.50 8.95 38.14 2.69
3920 3954 6.183360 CGCTGCAAACTAAGTTTATGAGATGA 60.183 38.462 0.00 0.00 33.70 2.92
3921 3955 5.961843 CGCTGCAAACTAAGTTTATGAGATG 59.038 40.000 0.00 0.00 33.70 2.90
3924 3958 4.091424 GCGCTGCAAACTAAGTTTATGAG 58.909 43.478 0.00 0.00 33.70 2.90
3929 3963 2.287608 GGAAGCGCTGCAAACTAAGTTT 60.288 45.455 19.31 0.00 36.05 2.66
3941 3975 2.668457 CACAACTAAGTAGGAAGCGCTG 59.332 50.000 12.58 0.00 0.00 5.18
3943 3977 1.393883 GCACAACTAAGTAGGAAGCGC 59.606 52.381 0.00 0.00 0.00 5.92
3944 3978 2.683968 TGCACAACTAAGTAGGAAGCG 58.316 47.619 0.00 0.00 0.00 4.68
3945 3979 4.065789 ACTTGCACAACTAAGTAGGAAGC 58.934 43.478 0.00 0.00 35.50 3.86
3947 3981 9.953565 ATAAATACTTGCACAACTAAGTAGGAA 57.046 29.630 0.00 0.00 41.22 3.36
3960 4070 9.908152 AAAGTTAAAGGACATAAATACTTGCAC 57.092 29.630 0.00 0.00 0.00 4.57
3980 4090 7.116075 TCCAGAATTAGCAAGCCATAAAGTTA 58.884 34.615 0.00 0.00 0.00 2.24
3986 4096 4.778213 ACTCCAGAATTAGCAAGCCATA 57.222 40.909 0.00 0.00 0.00 2.74
3993 4103 6.039717 GCCATTATTCAACTCCAGAATTAGCA 59.960 38.462 0.00 0.00 37.02 3.49
3997 4107 6.894103 AGAAGCCATTATTCAACTCCAGAATT 59.106 34.615 0.00 0.00 37.02 2.17
4001 4111 5.065731 GTGAGAAGCCATTATTCAACTCCAG 59.934 44.000 0.00 0.00 0.00 3.86
4020 4130 1.216444 GTCATGAGCCAGCGTGAGA 59.784 57.895 0.00 0.00 34.68 3.27
4023 4133 1.028330 ATTGGTCATGAGCCAGCGTG 61.028 55.000 21.58 0.00 37.31 5.34
4024 4134 0.322816 AATTGGTCATGAGCCAGCGT 60.323 50.000 21.58 7.51 37.31 5.07
4030 4140 1.404391 CCTGCAGAATTGGTCATGAGC 59.596 52.381 17.39 18.01 0.00 4.26
4036 4146 0.244721 GCCAACCTGCAGAATTGGTC 59.755 55.000 32.89 25.60 44.05 4.02
4037 4147 1.526575 CGCCAACCTGCAGAATTGGT 61.527 55.000 32.89 17.28 44.05 3.67
4045 4155 2.203337 AGCTTTCGCCAACCTGCA 60.203 55.556 0.00 0.00 36.60 4.41
4076 4186 2.858745 AGGTTGGGTGTACAATGTGAC 58.141 47.619 0.00 0.00 32.24 3.67
4078 4188 4.142049 ACAAAAGGTTGGGTGTACAATGTG 60.142 41.667 0.00 0.00 39.22 3.21
4079 4189 4.027437 ACAAAAGGTTGGGTGTACAATGT 58.973 39.130 0.00 0.00 39.22 2.71
4080 4190 4.664150 ACAAAAGGTTGGGTGTACAATG 57.336 40.909 0.00 0.00 39.22 2.82
4081 4191 5.685520 AAACAAAAGGTTGGGTGTACAAT 57.314 34.783 0.00 0.00 40.35 2.71
4082 4192 5.485209 AAAACAAAAGGTTGGGTGTACAA 57.515 34.783 0.00 0.00 40.35 2.41
4090 4200 3.862845 CGACCAGAAAAACAAAAGGTTGG 59.137 43.478 0.00 0.00 40.35 3.77
4116 4226 1.918262 TGAGGAAGGGAGCAACATGAT 59.082 47.619 0.00 0.00 0.00 2.45
4129 4315 3.618690 ACCGAAGAAAGGATGAGGAAG 57.381 47.619 0.00 0.00 0.00 3.46
4142 4328 3.603532 TCTTACTCGAGCTAACCGAAGA 58.396 45.455 13.61 7.36 35.48 2.87
4148 4334 3.692576 TGCGATTCTTACTCGAGCTAAC 58.307 45.455 13.61 0.00 38.38 2.34
4156 4342 5.533482 ACAGGTGATATGCGATTCTTACTC 58.467 41.667 0.00 0.00 0.00 2.59
4166 4352 7.935520 AGTATCTATATGACAGGTGATATGCG 58.064 38.462 2.24 0.00 0.00 4.73
4174 4360 6.795590 ACAGCCTAGTATCTATATGACAGGT 58.204 40.000 0.00 0.00 0.00 4.00
4190 4376 3.443976 ACGCAAAAACAAAACAGCCTAG 58.556 40.909 0.00 0.00 0.00 3.02
4191 4377 3.512033 ACGCAAAAACAAAACAGCCTA 57.488 38.095 0.00 0.00 0.00 3.93
4192 4378 2.378445 ACGCAAAAACAAAACAGCCT 57.622 40.000 0.00 0.00 0.00 4.58
4194 4380 5.613812 ACTAAAACGCAAAAACAAAACAGC 58.386 33.333 0.00 0.00 0.00 4.40
4195 4381 7.044589 AGACTAAAACGCAAAAACAAAACAG 57.955 32.000 0.00 0.00 0.00 3.16
4196 4382 7.409465 AAGACTAAAACGCAAAAACAAAACA 57.591 28.000 0.00 0.00 0.00 2.83
4198 4384 9.159470 CAAAAAGACTAAAACGCAAAAACAAAA 57.841 25.926 0.00 0.00 0.00 2.44
4199 4385 7.798982 CCAAAAAGACTAAAACGCAAAAACAAA 59.201 29.630 0.00 0.00 0.00 2.83
4201 4387 6.645415 TCCAAAAAGACTAAAACGCAAAAACA 59.355 30.769 0.00 0.00 0.00 2.83
4202 4388 6.951530 GTCCAAAAAGACTAAAACGCAAAAAC 59.048 34.615 0.00 0.00 33.79 2.43
4303 4495 2.004583 TGATAGGCAGACCGTTTTCG 57.995 50.000 0.00 0.00 42.76 3.46
4308 4500 2.501723 AGACAAATGATAGGCAGACCGT 59.498 45.455 0.00 0.00 42.76 4.83
4318 4510 8.347035 CAATGTGTGATGCATAGACAAATGATA 58.653 33.333 12.65 0.00 0.00 2.15
4319 4511 6.954487 ATGTGTGATGCATAGACAAATGAT 57.046 33.333 11.56 2.27 0.00 2.45
4328 4520 5.287752 GCTTTGTTCAATGTGTGATGCATAG 59.712 40.000 0.00 0.00 35.70 2.23
4334 4526 3.553508 GCAGGCTTTGTTCAATGTGTGAT 60.554 43.478 0.00 0.00 35.70 3.06
4337 4529 2.034124 AGCAGGCTTTGTTCAATGTGT 58.966 42.857 0.00 0.00 0.00 3.72
4344 4537 2.031333 CACAGAAGAGCAGGCTTTGTTC 60.031 50.000 0.00 0.00 37.30 3.18
4403 4622 6.513884 GCGATGCAATTAGAAATGAATCTCCA 60.514 38.462 0.00 0.00 30.61 3.86
4407 4626 6.204359 ACAGCGATGCAATTAGAAATGAATC 58.796 36.000 0.00 0.00 0.00 2.52
4409 4628 5.355071 AGACAGCGATGCAATTAGAAATGAA 59.645 36.000 0.00 0.00 0.00 2.57
4473 4713 6.322712 TGCATCATCTCATTTTCATCATGGAA 59.677 34.615 0.00 0.00 0.00 3.53
4479 4719 5.509163 CCCCTTGCATCATCTCATTTTCATC 60.509 44.000 0.00 0.00 0.00 2.92
4490 4730 5.482908 CATACTACTACCCCTTGCATCATC 58.517 45.833 0.00 0.00 0.00 2.92
4496 4747 3.403038 CATGCATACTACTACCCCTTGC 58.597 50.000 0.00 0.00 0.00 4.01
4537 4796 2.223180 GCCGGTAAAACACGAATGGATC 60.223 50.000 1.90 0.00 0.00 3.36
4538 4797 1.741145 GCCGGTAAAACACGAATGGAT 59.259 47.619 1.90 0.00 0.00 3.41
4542 4801 0.519961 GCAGCCGGTAAAACACGAAT 59.480 50.000 1.90 0.00 0.00 3.34
4543 4802 0.533308 AGCAGCCGGTAAAACACGAA 60.533 50.000 1.90 0.00 0.00 3.85
4544 4803 0.317799 TAGCAGCCGGTAAAACACGA 59.682 50.000 1.90 0.00 0.00 4.35
4545 4804 1.062002 CATAGCAGCCGGTAAAACACG 59.938 52.381 1.90 0.00 0.00 4.49
4546 4805 2.352388 TCATAGCAGCCGGTAAAACAC 58.648 47.619 1.90 0.00 0.00 3.32
4547 4806 2.772077 TCATAGCAGCCGGTAAAACA 57.228 45.000 1.90 0.00 0.00 2.83
4548 4807 2.287009 GCATCATAGCAGCCGGTAAAAC 60.287 50.000 1.90 0.00 0.00 2.43
4549 4808 1.946768 GCATCATAGCAGCCGGTAAAA 59.053 47.619 1.90 0.00 0.00 1.52
4550 4809 1.593196 GCATCATAGCAGCCGGTAAA 58.407 50.000 1.90 0.00 0.00 2.01
4551 4810 0.250295 GGCATCATAGCAGCCGGTAA 60.250 55.000 1.90 0.00 38.86 2.85
4552 4811 1.371183 GGCATCATAGCAGCCGGTA 59.629 57.895 1.90 0.00 38.86 4.02
4631 4890 1.074775 AGGGGCACTTGAAATCGCA 59.925 52.632 0.00 0.00 0.00 5.10
4678 4937 0.951558 CACCAGGGACACTTTTTCCG 59.048 55.000 0.00 0.00 33.43 4.30
4680 4939 1.338020 CAGCACCAGGGACACTTTTTC 59.662 52.381 0.00 0.00 0.00 2.29
4689 4948 3.957586 CAGCACCAGCACCAGGGA 61.958 66.667 0.00 0.00 45.49 4.20
4691 4950 4.275508 ACCAGCACCAGCACCAGG 62.276 66.667 0.00 0.00 45.49 4.45
4692 4951 2.981909 CACCAGCACCAGCACCAG 60.982 66.667 0.00 0.00 45.49 4.00
4693 4952 4.584518 CCACCAGCACCAGCACCA 62.585 66.667 0.00 0.00 45.49 4.17
4701 4960 4.729918 CTCCCAGGCCACCAGCAC 62.730 72.222 5.01 0.00 46.50 4.40
4702 4961 4.980592 TCTCCCAGGCCACCAGCA 62.981 66.667 5.01 0.00 46.50 4.41
4703 4962 2.505364 AAATCTCCCAGGCCACCAGC 62.505 60.000 5.01 0.00 42.60 4.85
4704 4963 0.918983 TAAATCTCCCAGGCCACCAG 59.081 55.000 5.01 0.00 0.00 4.00
4717 4976 1.583054 GTCGCCGCTGGATTAAATCT 58.417 50.000 0.00 0.00 0.00 2.40
4737 4996 3.432051 CTCGTCTGGTCCGATGGGC 62.432 68.421 0.00 0.00 33.27 5.36
4738 4997 1.605058 AACTCGTCTGGTCCGATGGG 61.605 60.000 0.00 0.00 33.27 4.00
4739 4998 0.246635 AAACTCGTCTGGTCCGATGG 59.753 55.000 0.00 0.00 33.27 3.51
4740 4999 2.422479 TCTAAACTCGTCTGGTCCGATG 59.578 50.000 0.00 0.00 33.27 3.84
4741 5000 2.683867 CTCTAAACTCGTCTGGTCCGAT 59.316 50.000 0.00 0.00 33.27 4.18
4742 5001 2.082231 CTCTAAACTCGTCTGGTCCGA 58.918 52.381 0.00 0.00 0.00 4.55
4743 5002 1.132643 CCTCTAAACTCGTCTGGTCCG 59.867 57.143 0.00 0.00 0.00 4.79
4744 5003 2.094649 CACCTCTAAACTCGTCTGGTCC 60.095 54.545 0.00 0.00 0.00 4.46
4745 5004 2.094649 CCACCTCTAAACTCGTCTGGTC 60.095 54.545 0.00 0.00 0.00 4.02
4746 5005 1.893801 CCACCTCTAAACTCGTCTGGT 59.106 52.381 0.00 0.00 0.00 4.00
4747 5006 1.404315 GCCACCTCTAAACTCGTCTGG 60.404 57.143 0.00 0.00 0.00 3.86
4748 5007 1.732732 CGCCACCTCTAAACTCGTCTG 60.733 57.143 0.00 0.00 0.00 3.51
4749 5008 0.526662 CGCCACCTCTAAACTCGTCT 59.473 55.000 0.00 0.00 0.00 4.18
4750 5009 0.458025 CCGCCACCTCTAAACTCGTC 60.458 60.000 0.00 0.00 0.00 4.20
4751 5010 1.590147 CCGCCACCTCTAAACTCGT 59.410 57.895 0.00 0.00 0.00 4.18
4752 5011 1.810030 GCCGCCACCTCTAAACTCG 60.810 63.158 0.00 0.00 0.00 4.18
4753 5012 1.019805 GTGCCGCCACCTCTAAACTC 61.020 60.000 0.00 0.00 35.92 3.01
4754 5013 1.003718 GTGCCGCCACCTCTAAACT 60.004 57.895 0.00 0.00 35.92 2.66
4755 5014 0.248289 TAGTGCCGCCACCTCTAAAC 59.752 55.000 0.00 0.00 43.09 2.01
4756 5015 0.978151 TTAGTGCCGCCACCTCTAAA 59.022 50.000 0.00 0.00 43.09 1.85
4757 5016 0.248289 GTTAGTGCCGCCACCTCTAA 59.752 55.000 0.00 0.00 43.09 2.10
4758 5017 1.895238 GTTAGTGCCGCCACCTCTA 59.105 57.895 0.00 0.00 43.09 2.43
4759 5018 2.663196 GTTAGTGCCGCCACCTCT 59.337 61.111 0.00 0.00 43.09 3.69
4760 5019 2.813908 CGTTAGTGCCGCCACCTC 60.814 66.667 0.00 0.00 43.09 3.85
4761 5020 4.388499 CCGTTAGTGCCGCCACCT 62.388 66.667 0.00 0.00 43.09 4.00
4768 5027 4.832608 CTCGCCCCCGTTAGTGCC 62.833 72.222 0.00 0.00 35.54 5.01
4769 5028 4.832608 CCTCGCCCCCGTTAGTGC 62.833 72.222 0.00 0.00 35.54 4.40
4770 5029 2.951101 AACCTCGCCCCCGTTAGTG 61.951 63.158 0.00 0.00 35.54 2.74
4782 5041 1.562672 ATCTCCCCCAACCAACCTCG 61.563 60.000 0.00 0.00 0.00 4.63
4865 5126 3.423154 CTTGGTGGCGCCGAAGAC 61.423 66.667 23.90 14.44 41.21 3.01
4866 5127 2.463589 ATTCTTGGTGGCGCCGAAGA 62.464 55.000 24.05 24.05 41.21 2.87
4911 5175 6.863275 AGCATAAATACTTACAAAAGCACCC 58.137 36.000 0.00 0.00 36.05 4.61
4946 5210 1.112950 GCCCTACTCGCTAAAGACCT 58.887 55.000 0.00 0.00 0.00 3.85
4960 5224 0.693622 TCGTCCACCAAAATGCCCTA 59.306 50.000 0.00 0.00 0.00 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.