Multiple sequence alignment - TraesCS3D01G403400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G403400 chr3D 100.000 5582 0 0 1 5582 517487361 517481780 0.000000e+00 10309.0
1 TraesCS3D01G403400 chr3D 93.750 240 9 4 2585 2821 517484717 517484481 6.880000e-94 355.0
2 TraesCS3D01G403400 chr3D 93.750 240 9 4 2645 2881 517484777 517484541 6.880000e-94 355.0
3 TraesCS3D01G403400 chr3D 93.011 186 11 2 4894 5078 181962994 181963178 2.560000e-68 270.0
4 TraesCS3D01G403400 chr3D 93.407 182 6 4 2583 2761 517484659 517484481 1.190000e-66 265.0
5 TraesCS3D01G403400 chr3D 93.407 182 6 4 2703 2881 517484779 517484601 1.190000e-66 265.0
6 TraesCS3D01G403400 chr3D 95.082 122 6 0 2583 2704 517484602 517484481 5.710000e-45 193.0
7 TraesCS3D01G403400 chr3D 95.082 122 6 0 2760 2881 517484779 517484658 5.710000e-45 193.0
8 TraesCS3D01G403400 chr3D 96.721 61 2 0 2583 2643 517484542 517484482 9.890000e-18 102.0
9 TraesCS3D01G403400 chr3D 96.721 61 2 0 2820 2880 517484779 517484719 9.890000e-18 102.0
10 TraesCS3D01G403400 chr3B 89.831 2006 131 44 649 2639 681208512 681206565 0.000000e+00 2507.0
11 TraesCS3D01G403400 chr3B 84.542 2083 205 54 2820 4846 681206621 681204600 0.000000e+00 1954.0
12 TraesCS3D01G403400 chr3B 91.121 473 32 4 5079 5544 681204605 681204136 2.840000e-177 632.0
13 TraesCS3D01G403400 chr3B 90.000 270 19 7 1 266 681209425 681209160 5.350000e-90 342.0
14 TraesCS3D01G403400 chr3B 83.333 342 37 10 306 638 681208880 681208550 1.180000e-76 298.0
15 TraesCS3D01G403400 chr3B 89.474 57 6 0 2760 2816 681206621 681206565 7.760000e-09 73.1
16 TraesCS3D01G403400 chr3A 93.425 1308 70 8 649 1954 653327788 653326495 0.000000e+00 1925.0
17 TraesCS3D01G403400 chr3A 83.469 1470 136 44 3489 4891 653324801 653323372 0.000000e+00 1269.0
18 TraesCS3D01G403400 chr3A 89.427 454 31 12 2108 2547 653326453 653326003 1.760000e-154 556.0
19 TraesCS3D01G403400 chr3A 89.145 433 32 5 2820 3243 653326002 653325576 4.950000e-145 525.0
20 TraesCS3D01G403400 chr3A 89.494 257 25 2 3242 3498 653325473 653325219 1.940000e-84 324.0
21 TraesCS3D01G403400 chr3A 90.909 231 8 4 5332 5553 653322891 653322665 1.180000e-76 298.0
22 TraesCS3D01G403400 chr3A 89.381 226 16 6 1 221 653329997 653329775 1.530000e-70 278.0
23 TraesCS3D01G403400 chr3A 93.548 186 9 3 4894 5078 643956594 643956777 1.980000e-69 274.0
24 TraesCS3D01G403400 chr3A 92.500 80 5 1 2565 2643 653326021 653325942 4.570000e-21 113.0
25 TraesCS3D01G403400 chr3A 93.548 62 4 0 2760 2821 653326002 653325941 5.950000e-15 93.5
26 TraesCS3D01G403400 chr6D 88.378 370 22 7 765 1123 382611594 382611953 5.170000e-115 425.0
27 TraesCS3D01G403400 chr6D 93.011 186 11 2 4894 5078 16921439 16921255 2.560000e-68 270.0
28 TraesCS3D01G403400 chr6D 93.011 186 10 3 4894 5078 374071747 374071930 9.220000e-68 268.0
29 TraesCS3D01G403400 chr2B 83.152 368 48 11 2153 2510 110411427 110411064 1.940000e-84 324.0
30 TraesCS3D01G403400 chr2B 83.793 290 42 5 1629 1917 110411924 110411639 2.560000e-68 270.0
31 TraesCS3D01G403400 chr2B 80.054 371 53 16 3908 4272 110409797 110409442 7.180000e-64 255.0
32 TraesCS3D01G403400 chr2A 82.609 368 50 11 2153 2510 71591924 71591561 4.200000e-81 313.0
33 TraesCS3D01G403400 chr2A 84.483 290 40 5 1629 1917 71592412 71592127 1.180000e-71 281.0
34 TraesCS3D01G403400 chr2A 78.734 395 60 18 3908 4295 71590292 71589915 5.590000e-60 243.0
35 TraesCS3D01G403400 chr2D 82.058 379 49 16 2123 2490 73004516 73004146 7.030000e-79 305.0
36 TraesCS3D01G403400 chr2D 80.253 395 56 17 3908 4295 73002856 73002477 1.530000e-70 278.0
37 TraesCS3D01G403400 chr2D 83.793 290 42 5 1629 1917 73004989 73004704 2.560000e-68 270.0
38 TraesCS3D01G403400 chr7B 93.011 186 11 2 4894 5078 333642158 333641974 2.560000e-68 270.0
39 TraesCS3D01G403400 chr4B 93.407 182 12 0 4894 5075 159604566 159604385 2.560000e-68 270.0
40 TraesCS3D01G403400 chr1B 93.048 187 10 3 4894 5078 239055659 239055844 2.560000e-68 270.0
41 TraesCS3D01G403400 chr1D 93.011 186 9 3 4894 5078 453019126 453019308 9.220000e-68 268.0
42 TraesCS3D01G403400 chr5B 92.553 188 10 3 4894 5078 322971969 322971783 3.320000e-67 267.0
43 TraesCS3D01G403400 chr4A 83.500 200 11 9 765 952 621514118 621513929 3.460000e-37 167.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G403400 chr3D 517481780 517487361 5581 True 1348.777778 10309 95.324444 1 5582 9 chr3D.!!$R1 5581
1 TraesCS3D01G403400 chr3B 681204136 681209425 5289 True 967.683333 2507 88.050167 1 5544 6 chr3B.!!$R1 5543
2 TraesCS3D01G403400 chr3A 653322665 653329997 7332 True 597.944444 1925 90.144222 1 5553 9 chr3A.!!$R1 5552
3 TraesCS3D01G403400 chr2B 110409442 110411924 2482 True 283.000000 324 82.333000 1629 4272 3 chr2B.!!$R1 2643
4 TraesCS3D01G403400 chr2A 71589915 71592412 2497 True 279.000000 313 81.942000 1629 4295 3 chr2A.!!$R1 2666
5 TraesCS3D01G403400 chr2D 73002477 73004989 2512 True 284.333333 305 82.034667 1629 4295 3 chr2D.!!$R1 2666

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
206 212 0.467290 AGGAGCCAAAACTTCGCCAA 60.467 50.0 0.00 0.0 0.00 4.52 F
1008 2851 0.035458 GCCCCGAATCGATGGAGATT 59.965 55.0 13.86 0.0 42.92 2.40 F
1627 3482 0.031585 TTCGAGCTGTGCAAGTACGT 59.968 50.0 0.00 0.0 0.00 3.57 F
1991 3862 0.740737 GTTCTGCTGTTGTTGCCACT 59.259 50.0 0.00 0.0 0.00 4.00 F
2050 3928 1.160137 CTGCCTCTTGTGTTACCAGC 58.840 55.0 0.00 0.0 0.00 4.85 F
3963 6615 0.941463 GCGAGCCGACCAGTGATATG 60.941 60.0 0.00 0.0 0.00 1.78 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1303 3158 0.319555 TCCGGTTCGTTTCAGAGCAG 60.320 55.000 0.0 0.0 0.00 4.24 R
2184 4062 1.408969 TGCCAAGACCTTCCAAAACC 58.591 50.000 0.0 0.0 0.00 3.27 R
3571 6186 0.108186 TCCAGTTGCTACCTGATGCG 60.108 55.000 0.0 0.0 31.38 4.73 R
3892 6544 2.097466 GCACATGTAATTTCCCGACCAG 59.903 50.000 0.0 0.0 0.00 4.00 R
4001 6653 2.032117 TGACAGCACAAAACATGTAGCG 60.032 45.455 0.0 0.0 41.46 4.26 R
5076 7783 0.041535 AGAATGGGCAGCAATGGGAA 59.958 50.000 0.0 0.0 0.00 3.97 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 71 9.638300 CAAAATAAGCTTTTCGTAGCACTATAG 57.362 33.333 3.20 0.00 43.68 1.31
112 117 7.218614 TGTCATTTCTCCTTGAAAATTTGCAT 58.781 30.769 0.00 0.00 46.32 3.96
125 130 6.760298 TGAAAATTTGCATGCAACTAGAACAA 59.240 30.769 31.99 15.70 35.46 2.83
149 154 9.912634 CAAGTGAACATGTTTATTGTTAATCCT 57.087 29.630 13.36 0.00 37.43 3.24
206 212 0.467290 AGGAGCCAAAACTTCGCCAA 60.467 50.000 0.00 0.00 0.00 4.52
257 1170 4.520492 GGTGGTTCCCATATTCAAGCATAG 59.480 45.833 0.00 0.00 35.28 2.23
277 1446 1.024579 AATGTGAATCGCGGACCACC 61.025 55.000 6.13 0.00 0.00 4.61
290 1459 1.152756 ACCACCCCAAGTTGTGAGC 60.153 57.895 1.45 0.00 34.37 4.26
292 1461 0.468029 CCACCCCAAGTTGTGAGCTT 60.468 55.000 1.45 0.00 34.37 3.74
293 1462 0.954452 CACCCCAAGTTGTGAGCTTC 59.046 55.000 1.45 0.00 34.37 3.86
295 1464 1.242076 CCCCAAGTTGTGAGCTTCAG 58.758 55.000 1.45 0.00 0.00 3.02
296 1465 1.477558 CCCCAAGTTGTGAGCTTCAGT 60.478 52.381 1.45 0.00 0.00 3.41
297 1466 1.605710 CCCAAGTTGTGAGCTTCAGTG 59.394 52.381 1.45 0.00 0.00 3.66
338 1825 1.712081 CAGAAAGTCAGATGCGCCG 59.288 57.895 4.18 0.00 0.00 6.46
339 1826 1.448540 AGAAAGTCAGATGCGCCGG 60.449 57.895 4.18 0.00 0.00 6.13
340 1827 3.100862 GAAAGTCAGATGCGCCGGC 62.101 63.158 19.07 19.07 40.52 6.13
355 1844 2.644992 GGCCAAAACCAGCTGTCG 59.355 61.111 13.81 0.00 0.00 4.35
388 1877 1.694150 CAGGGTGTTCACCTCTCTCAA 59.306 52.381 19.42 0.00 35.78 3.02
393 1882 3.368948 GGTGTTCACCTCTCTCAAGATCC 60.369 52.174 13.97 0.00 0.00 3.36
427 1916 4.279169 TCATTGAAGCTTTCCTCCAAGTTG 59.721 41.667 0.00 0.00 0.00 3.16
432 1921 5.938125 TGAAGCTTTCCTCCAAGTTGTATAC 59.062 40.000 0.00 0.00 0.00 1.47
437 1926 8.107095 AGCTTTCCTCCAAGTTGTATACAATTA 58.893 33.333 20.72 2.17 38.24 1.40
438 1927 8.903820 GCTTTCCTCCAAGTTGTATACAATTAT 58.096 33.333 20.72 8.13 38.24 1.28
597 2101 2.327343 GGTCCGGCCCGTGTAAAAC 61.327 63.158 0.85 0.00 0.00 2.43
600 2104 2.559330 CGGCCCGTGTAAAACAGC 59.441 61.111 0.00 0.00 0.00 4.40
602 2106 1.284715 GGCCCGTGTAAAACAGCAC 59.715 57.895 0.00 0.00 30.89 4.40
605 2109 0.511221 CCCGTGTAAAACAGCACTCG 59.489 55.000 0.00 0.00 33.78 4.18
638 2449 2.726989 GCACTGACTTCATTGCGTGATG 60.727 50.000 5.88 4.05 41.47 3.07
774 2612 1.067635 GCAGCCGATTCACCAAACAAT 60.068 47.619 0.00 0.00 0.00 2.71
901 2744 1.546476 ACGCTTCCTCTTCACGATCTT 59.454 47.619 0.00 0.00 0.00 2.40
910 2753 4.493547 CTCTTCACGATCTTCTCTTTGCT 58.506 43.478 0.00 0.00 0.00 3.91
913 2756 4.257267 TCACGATCTTCTCTTTGCTTCA 57.743 40.909 0.00 0.00 0.00 3.02
921 2764 5.563592 TCTTCTCTTTGCTTCATCCATTGA 58.436 37.500 0.00 0.00 0.00 2.57
1008 2851 0.035458 GCCCCGAATCGATGGAGATT 59.965 55.000 13.86 0.00 42.92 2.40
1094 2937 1.000486 TCCGGACCTCCTTCCTCAG 60.000 63.158 0.00 0.00 32.88 3.35
1117 2960 2.733593 GCGGTGCGTTTCTCGAGT 60.734 61.111 13.13 0.00 42.86 4.18
1203 3052 3.679083 GCTGTGGATTCGGTTAGCTAGTT 60.679 47.826 0.00 0.00 0.00 2.24
1204 3053 4.504858 CTGTGGATTCGGTTAGCTAGTTT 58.495 43.478 0.00 0.00 0.00 2.66
1205 3054 5.657474 CTGTGGATTCGGTTAGCTAGTTTA 58.343 41.667 0.00 0.00 0.00 2.01
1206 3055 5.657474 TGTGGATTCGGTTAGCTAGTTTAG 58.343 41.667 0.00 0.00 0.00 1.85
1278 3127 5.376854 CGAAGGTTTTGGAGATTGTGATT 57.623 39.130 0.00 0.00 0.00 2.57
1279 3128 6.494893 CGAAGGTTTTGGAGATTGTGATTA 57.505 37.500 0.00 0.00 0.00 1.75
1280 3129 7.088589 CGAAGGTTTTGGAGATTGTGATTAT 57.911 36.000 0.00 0.00 0.00 1.28
1281 3130 7.538575 CGAAGGTTTTGGAGATTGTGATTATT 58.461 34.615 0.00 0.00 0.00 1.40
1282 3131 7.485913 CGAAGGTTTTGGAGATTGTGATTATTG 59.514 37.037 0.00 0.00 0.00 1.90
1322 3177 0.319555 CTGCTCTGAAACGAACCGGA 60.320 55.000 9.46 0.00 0.00 5.14
1349 3204 3.255149 CCTCCAAATCTCCAATAGCATGC 59.745 47.826 10.51 10.51 0.00 4.06
1385 3240 2.480073 CCATGCTAATTTGCGGTTCCAG 60.480 50.000 7.37 0.00 35.36 3.86
1398 3253 4.141801 TGCGGTTCCAGCTACAAACTATAT 60.142 41.667 0.00 0.00 35.28 0.86
1530 3385 5.907207 TGCAGTAGAGAGCTTATCGAATTT 58.093 37.500 0.00 0.00 0.00 1.82
1582 3437 2.171237 TGGCCATGTTGATGACCTCTAG 59.829 50.000 0.00 0.00 33.32 2.43
1627 3482 0.031585 TTCGAGCTGTGCAAGTACGT 59.968 50.000 0.00 0.00 0.00 3.57
1722 3578 1.745653 GGTGAGTAAGGCCATTTCAGC 59.254 52.381 5.01 9.19 0.00 4.26
1927 3784 7.223777 GCACAGGTTTGTTGTGTTTATTGTTAT 59.776 33.333 7.16 0.00 45.89 1.89
1928 3785 9.737427 CACAGGTTTGTTGTGTTTATTGTTATA 57.263 29.630 0.00 0.00 40.73 0.98
1962 3833 5.126779 TGCACCAGTGACAGTACATTTTTA 58.873 37.500 0.99 0.00 0.00 1.52
1964 3835 5.912955 GCACCAGTGACAGTACATTTTTAAC 59.087 40.000 0.99 0.00 0.00 2.01
1967 3838 7.431084 CACCAGTGACAGTACATTTTTAACAAC 59.569 37.037 0.00 0.00 0.00 3.32
1970 3841 9.221775 CAGTGACAGTACATTTTTAACAACTTC 57.778 33.333 0.00 0.00 0.00 3.01
1971 3842 8.952278 AGTGACAGTACATTTTTAACAACTTCA 58.048 29.630 0.00 0.00 0.00 3.02
1972 3843 9.221775 GTGACAGTACATTTTTAACAACTTCAG 57.778 33.333 0.00 0.00 0.00 3.02
1974 3845 9.783256 GACAGTACATTTTTAACAACTTCAGTT 57.217 29.630 0.00 0.00 39.12 3.16
1975 3846 9.783256 ACAGTACATTTTTAACAACTTCAGTTC 57.217 29.630 0.00 0.00 35.83 3.01
1979 3850 7.547227 ACATTTTTAACAACTTCAGTTCTGCT 58.453 30.769 0.00 0.00 35.83 4.24
1980 3851 7.489113 ACATTTTTAACAACTTCAGTTCTGCTG 59.511 33.333 0.00 0.00 46.34 4.41
1982 3853 6.509418 TTTAACAACTTCAGTTCTGCTGTT 57.491 33.333 0.00 11.13 45.23 3.16
1983 3854 4.361451 AACAACTTCAGTTCTGCTGTTG 57.639 40.909 22.32 22.32 45.23 3.33
1984 3855 3.347216 ACAACTTCAGTTCTGCTGTTGT 58.653 40.909 23.11 23.11 45.23 3.32
1986 3857 4.100529 CAACTTCAGTTCTGCTGTTGTTG 58.899 43.478 19.03 14.53 45.23 3.33
1987 3858 2.098117 ACTTCAGTTCTGCTGTTGTTGC 59.902 45.455 0.00 0.00 45.23 4.17
1988 3859 1.024271 TCAGTTCTGCTGTTGTTGCC 58.976 50.000 0.00 0.00 45.23 4.52
1991 3862 0.740737 GTTCTGCTGTTGTTGCCACT 59.259 50.000 0.00 0.00 0.00 4.00
1992 3863 1.946768 GTTCTGCTGTTGTTGCCACTA 59.053 47.619 0.00 0.00 0.00 2.74
1998 3871 3.885901 TGCTGTTGTTGCCACTAATACAA 59.114 39.130 0.00 0.00 0.00 2.41
2050 3928 1.160137 CTGCCTCTTGTGTTACCAGC 58.840 55.000 0.00 0.00 0.00 4.85
2059 3937 5.676552 TCTTGTGTTACCAGCTTCTTGTTA 58.323 37.500 0.00 0.00 0.00 2.41
2065 3943 6.037830 GTGTTACCAGCTTCTTGTTAGTTTGA 59.962 38.462 0.00 0.00 0.00 2.69
2072 3950 7.604164 CCAGCTTCTTGTTAGTTTGAATCTCTA 59.396 37.037 0.00 0.00 0.00 2.43
2073 3951 8.655092 CAGCTTCTTGTTAGTTTGAATCTCTAG 58.345 37.037 0.00 0.00 0.00 2.43
2075 3953 7.333174 GCTTCTTGTTAGTTTGAATCTCTAGCT 59.667 37.037 0.00 0.00 0.00 3.32
2077 3955 8.764524 TCTTGTTAGTTTGAATCTCTAGCTTC 57.235 34.615 0.00 0.00 0.00 3.86
2079 3957 8.539770 TTGTTAGTTTGAATCTCTAGCTTCTG 57.460 34.615 0.00 0.00 0.00 3.02
2081 3959 7.600375 TGTTAGTTTGAATCTCTAGCTTCTGTG 59.400 37.037 0.00 0.00 0.00 3.66
2082 3960 5.486526 AGTTTGAATCTCTAGCTTCTGTGG 58.513 41.667 0.00 0.00 0.00 4.17
2083 3961 4.478206 TTGAATCTCTAGCTTCTGTGGG 57.522 45.455 0.00 0.00 0.00 4.61
2084 3962 3.713003 TGAATCTCTAGCTTCTGTGGGA 58.287 45.455 0.00 0.00 0.00 4.37
2085 3963 4.293494 TGAATCTCTAGCTTCTGTGGGAT 58.707 43.478 0.00 0.00 0.00 3.85
2086 3964 4.343526 TGAATCTCTAGCTTCTGTGGGATC 59.656 45.833 0.00 0.00 0.00 3.36
2087 3965 3.678965 TCTCTAGCTTCTGTGGGATCT 57.321 47.619 0.00 0.00 0.00 2.75
2088 3966 3.987745 TCTCTAGCTTCTGTGGGATCTT 58.012 45.455 0.00 0.00 0.00 2.40
2089 3967 3.957497 TCTCTAGCTTCTGTGGGATCTTC 59.043 47.826 0.00 0.00 0.00 2.87
2090 3968 3.960102 CTCTAGCTTCTGTGGGATCTTCT 59.040 47.826 0.00 0.00 0.00 2.85
2091 3969 4.357325 TCTAGCTTCTGTGGGATCTTCTT 58.643 43.478 0.00 0.00 0.00 2.52
2092 3970 3.347077 AGCTTCTGTGGGATCTTCTTG 57.653 47.619 0.00 0.00 0.00 3.02
2093 3971 2.641815 AGCTTCTGTGGGATCTTCTTGT 59.358 45.455 0.00 0.00 0.00 3.16
2094 3972 3.006247 GCTTCTGTGGGATCTTCTTGTC 58.994 50.000 0.00 0.00 0.00 3.18
2095 3973 3.557898 GCTTCTGTGGGATCTTCTTGTCA 60.558 47.826 0.00 0.00 0.00 3.58
2096 3974 3.685139 TCTGTGGGATCTTCTTGTCAC 57.315 47.619 0.00 0.00 0.00 3.67
2097 3975 2.972021 TCTGTGGGATCTTCTTGTCACA 59.028 45.455 0.00 0.00 34.54 3.58
2098 3976 3.332919 CTGTGGGATCTTCTTGTCACAG 58.667 50.000 0.00 0.00 43.58 3.66
2099 3977 2.972021 TGTGGGATCTTCTTGTCACAGA 59.028 45.455 0.00 0.00 32.36 3.41
2100 3978 3.007290 TGTGGGATCTTCTTGTCACAGAG 59.993 47.826 0.00 0.00 32.36 3.35
2101 3979 2.568956 TGGGATCTTCTTGTCACAGAGG 59.431 50.000 0.00 0.00 0.00 3.69
2102 3980 2.093235 GGGATCTTCTTGTCACAGAGGG 60.093 54.545 0.00 0.00 0.00 4.30
2103 3981 2.569404 GGATCTTCTTGTCACAGAGGGT 59.431 50.000 0.00 0.00 0.00 4.34
2155 4033 8.988064 ATACGAGCCTATTGTACAATATTCTG 57.012 34.615 24.81 14.81 33.29 3.02
2184 4062 8.442384 GCATTCAACCTTATAACATGGTTTTTG 58.558 33.333 5.16 5.25 41.53 2.44
2213 4092 3.795688 AGGTCTTGGCATCTCAAAAGA 57.204 42.857 0.00 0.00 35.54 2.52
2270 4158 6.742109 GCTGATGCTGATTGGTAATGTTATT 58.258 36.000 0.00 0.00 36.03 1.40
2302 4190 5.551760 AAGCTTACATTTGATTCCTGTCG 57.448 39.130 0.00 0.00 0.00 4.35
2318 4206 4.569162 TCCTGTCGTCTGTTTGTTTTACAG 59.431 41.667 0.00 0.00 43.41 2.74
2329 4221 8.035394 TCTGTTTGTTTTACAGTGCCATTTTTA 58.965 29.630 0.00 0.00 42.77 1.52
2550 4454 4.775058 TGCGTTATACATTTGTGCCTTT 57.225 36.364 0.00 0.00 0.00 3.11
2558 4463 4.525912 ACATTTGTGCCTTTCAATCCTC 57.474 40.909 0.00 0.00 0.00 3.71
2563 4468 2.003301 GTGCCTTTCAATCCTCGACTC 58.997 52.381 0.00 0.00 0.00 3.36
2578 4483 5.239963 TCCTCGACTCGCAATAACATGTATA 59.760 40.000 0.00 0.00 0.00 1.47
2674 4627 9.265938 CATCTTATGTCAACTTGTGTAAATTCG 57.734 33.333 0.00 0.00 0.00 3.34
2675 4628 8.373048 TCTTATGTCAACTTGTGTAAATTCGT 57.627 30.769 0.00 0.00 0.00 3.85
2676 4629 9.478768 TCTTATGTCAACTTGTGTAAATTCGTA 57.521 29.630 0.00 0.00 0.00 3.43
2679 4632 6.367421 TGTCAACTTGTGTAAATTCGTATGC 58.633 36.000 0.00 0.00 0.00 3.14
2680 4633 6.203915 TGTCAACTTGTGTAAATTCGTATGCT 59.796 34.615 0.00 0.00 0.00 3.79
2681 4634 7.385478 TGTCAACTTGTGTAAATTCGTATGCTA 59.615 33.333 0.00 0.00 0.00 3.49
2682 4635 8.225107 GTCAACTTGTGTAAATTCGTATGCTAA 58.775 33.333 0.00 0.00 0.00 3.09
2683 4636 8.775527 TCAACTTGTGTAAATTCGTATGCTAAA 58.224 29.630 0.00 0.00 0.00 1.85
2684 4637 9.554724 CAACTTGTGTAAATTCGTATGCTAAAT 57.445 29.630 0.00 0.00 0.00 1.40
2686 4639 9.769093 ACTTGTGTAAATTCGTATGCTAAATTC 57.231 29.630 0.00 0.00 0.00 2.17
2687 4640 9.767684 CTTGTGTAAATTCGTATGCTAAATTCA 57.232 29.630 0.00 0.00 0.00 2.57
2689 4642 9.715123 TGTGTAAATTCGTATGCTAAATTCATG 57.285 29.630 0.00 0.00 0.00 3.07
2690 4643 9.716507 GTGTAAATTCGTATGCTAAATTCATGT 57.283 29.630 0.00 0.00 0.00 3.21
2728 4681 8.997621 ATATACATCTTACGTCAACTTGTGTT 57.002 30.769 0.00 0.00 36.75 3.32
2730 4683 8.821147 ATACATCTTACGTCAACTTGTGTTAA 57.179 30.769 0.00 0.00 34.60 2.01
2731 4684 7.724305 ACATCTTACGTCAACTTGTGTTAAT 57.276 32.000 0.00 0.00 34.60 1.40
2732 4685 8.149973 ACATCTTACGTCAACTTGTGTTAATT 57.850 30.769 0.00 0.00 34.60 1.40
2733 4686 8.617809 ACATCTTACGTCAACTTGTGTTAATTT 58.382 29.630 0.00 0.00 34.60 1.82
2734 4687 9.445786 CATCTTACGTCAACTTGTGTTAATTTT 57.554 29.630 0.00 0.00 34.60 1.82
2735 4688 8.829514 TCTTACGTCAACTTGTGTTAATTTTG 57.170 30.769 0.00 0.00 34.60 2.44
2736 4689 5.942325 ACGTCAACTTGTGTTAATTTTGC 57.058 34.783 0.00 0.00 34.60 3.68
2737 4690 5.646606 ACGTCAACTTGTGTTAATTTTGCT 58.353 33.333 0.00 0.00 34.60 3.91
2738 4691 6.787225 ACGTCAACTTGTGTTAATTTTGCTA 58.213 32.000 0.00 0.00 34.60 3.49
2739 4692 7.251994 ACGTCAACTTGTGTTAATTTTGCTAA 58.748 30.769 0.00 0.00 34.60 3.09
2740 4693 7.755822 ACGTCAACTTGTGTTAATTTTGCTAAA 59.244 29.630 0.00 0.00 34.60 1.85
2741 4694 8.751335 CGTCAACTTGTGTTAATTTTGCTAAAT 58.249 29.630 0.00 0.00 33.16 1.40
2791 4744 9.265938 CATCTTACATCAACTTGTGTTAATTCG 57.734 33.333 3.38 0.00 34.60 3.34
2792 4745 8.373048 TCTTACATCAACTTGTGTTAATTCGT 57.627 30.769 3.38 0.00 34.60 3.85
2793 4746 9.478768 TCTTACATCAACTTGTGTTAATTCGTA 57.521 29.630 3.38 0.00 34.60 3.43
2796 4749 7.021196 ACATCAACTTGTGTTAATTCGTATGC 58.979 34.615 0.00 0.00 34.60 3.14
2797 4750 6.795098 TCAACTTGTGTTAATTCGTATGCT 57.205 33.333 0.00 0.00 34.60 3.79
2798 4751 7.892778 TCAACTTGTGTTAATTCGTATGCTA 57.107 32.000 0.00 0.00 34.60 3.49
2799 4752 8.312896 TCAACTTGTGTTAATTCGTATGCTAA 57.687 30.769 0.00 0.00 34.60 3.09
2800 4753 8.775527 TCAACTTGTGTTAATTCGTATGCTAAA 58.224 29.630 0.00 0.00 34.60 1.85
2801 4754 9.554724 CAACTTGTGTTAATTCGTATGCTAAAT 57.445 29.630 0.00 0.00 34.60 1.40
2803 4756 9.769093 ACTTGTGTTAATTCGTATGCTAAATTC 57.231 29.630 0.00 0.00 0.00 2.17
2804 4757 9.767684 CTTGTGTTAATTCGTATGCTAAATTCA 57.232 29.630 0.00 0.00 0.00 2.57
2806 4759 9.715123 TGTGTTAATTCGTATGCTAAATTCATG 57.285 29.630 0.00 0.00 0.00 3.07
2807 4760 9.716507 GTGTTAATTCGTATGCTAAATTCATGT 57.283 29.630 0.00 0.00 0.00 3.21
2845 4798 8.997621 ATATACATCTTACGTCAACTTGTGTT 57.002 30.769 0.00 0.00 36.75 3.32
2846 4799 7.724305 ATACATCTTACGTCAACTTGTGTTT 57.276 32.000 0.00 0.00 33.52 2.83
2847 4800 8.821147 ATACATCTTACGTCAACTTGTGTTTA 57.179 30.769 0.00 0.00 33.52 2.01
2848 4801 7.724305 ACATCTTACGTCAACTTGTGTTTAT 57.276 32.000 0.00 0.00 33.52 1.40
2849 4802 7.793902 ACATCTTACGTCAACTTGTGTTTATC 58.206 34.615 0.00 0.00 33.52 1.75
2850 4803 6.774354 TCTTACGTCAACTTGTGTTTATCC 57.226 37.500 0.00 0.00 33.52 2.59
2851 4804 5.403166 TCTTACGTCAACTTGTGTTTATCCG 59.597 40.000 0.00 0.00 33.52 4.18
2852 4805 3.460103 ACGTCAACTTGTGTTTATCCGT 58.540 40.909 0.00 0.00 33.52 4.69
2853 4806 4.619973 ACGTCAACTTGTGTTTATCCGTA 58.380 39.130 0.00 0.00 33.52 4.02
2854 4807 5.232463 ACGTCAACTTGTGTTTATCCGTAT 58.768 37.500 0.00 0.00 33.52 3.06
2855 4808 5.119588 ACGTCAACTTGTGTTTATCCGTATG 59.880 40.000 0.00 0.00 33.52 2.39
2856 4809 5.321516 GTCAACTTGTGTTTATCCGTATGC 58.678 41.667 0.00 0.00 33.52 3.14
2857 4810 5.121768 GTCAACTTGTGTTTATCCGTATGCT 59.878 40.000 0.00 0.00 33.52 3.79
2858 4811 6.311935 GTCAACTTGTGTTTATCCGTATGCTA 59.688 38.462 0.00 0.00 33.52 3.49
2859 4812 6.874664 TCAACTTGTGTTTATCCGTATGCTAA 59.125 34.615 0.00 0.00 33.52 3.09
2860 4813 7.388224 TCAACTTGTGTTTATCCGTATGCTAAA 59.612 33.333 0.00 0.00 33.52 1.85
2861 4814 7.859325 ACTTGTGTTTATCCGTATGCTAAAT 57.141 32.000 0.00 0.00 0.00 1.40
2862 4815 8.276252 ACTTGTGTTTATCCGTATGCTAAATT 57.724 30.769 0.00 0.00 0.00 1.82
2863 4816 8.395633 ACTTGTGTTTATCCGTATGCTAAATTC 58.604 33.333 0.00 0.00 0.00 2.17
2864 4817 7.851387 TGTGTTTATCCGTATGCTAAATTCA 57.149 32.000 0.00 0.00 0.00 2.57
2865 4818 8.445275 TGTGTTTATCCGTATGCTAAATTCAT 57.555 30.769 0.00 0.00 0.00 2.57
2866 4819 8.341903 TGTGTTTATCCGTATGCTAAATTCATG 58.658 33.333 0.00 0.00 0.00 3.07
2867 4820 8.342634 GTGTTTATCCGTATGCTAAATTCATGT 58.657 33.333 0.00 0.00 0.00 3.21
2868 4821 8.898761 TGTTTATCCGTATGCTAAATTCATGTT 58.101 29.630 0.00 0.00 0.00 2.71
2871 4824 9.549078 TTATCCGTATGCTAAATTCATGTTACA 57.451 29.630 0.00 0.00 0.00 2.41
2872 4825 7.851387 TCCGTATGCTAAATTCATGTTACAA 57.149 32.000 0.00 0.00 0.00 2.41
2873 4826 8.445275 TCCGTATGCTAAATTCATGTTACAAT 57.555 30.769 0.00 0.00 0.00 2.71
2912 4866 2.162208 TGCTTAGGAAAATGCAAGCTCG 59.838 45.455 4.55 0.00 43.00 5.03
2948 4902 2.095008 TGATCAGCAGAAGAGTGTCGTC 60.095 50.000 0.00 0.00 0.00 4.20
2993 4953 2.945668 GGTGAGCTTATTAGTTGCAGGG 59.054 50.000 0.00 0.00 0.00 4.45
2994 4954 3.610911 GTGAGCTTATTAGTTGCAGGGT 58.389 45.455 0.00 0.00 0.00 4.34
3039 5018 9.646522 AAATTTATATATCTGGGACCATATGCC 57.353 33.333 0.00 0.00 39.94 4.40
3177 5156 5.952347 CAGAAAAAGGATACCCTAAAAGCCT 59.048 40.000 0.00 0.00 43.48 4.58
3251 5334 6.128363 GCGCCTACTACTTCATAGTTTTGTTT 60.128 38.462 0.00 0.00 41.71 2.83
3334 5419 2.949177 TGTGAATACAAGTGGTGCCT 57.051 45.000 0.00 0.00 32.88 4.75
3342 5427 1.893808 AAGTGGTGCCTTGTCAGCG 60.894 57.895 0.00 0.00 37.28 5.18
3390 5475 8.771766 GGTACTTTCTTCGTTAGTGATTTTCTT 58.228 33.333 0.00 0.00 0.00 2.52
3391 5476 9.582223 GTACTTTCTTCGTTAGTGATTTTCTTG 57.418 33.333 0.00 0.00 0.00 3.02
3464 5558 3.459598 TGAACTGATATGGGCTTAAGGCT 59.540 43.478 26.23 11.97 41.46 4.58
3472 5566 1.776667 TGGGCTTAAGGCTAGATGCAT 59.223 47.619 26.23 0.00 45.15 3.96
3482 5663 2.034305 GGCTAGATGCATGCTCAAAAGG 59.966 50.000 20.33 4.47 45.15 3.11
3497 6107 5.625656 GCTCAAAAGGTGCTAGAGTACTCAT 60.626 44.000 24.44 12.01 33.29 2.90
3518 6128 6.969043 TCATTCAGTAACCTTAATGACCCAT 58.031 36.000 0.00 0.00 36.73 4.00
3527 6137 6.893020 ACCTTAATGACCCATTAGAGACTT 57.107 37.500 0.00 0.00 37.57 3.01
3540 6150 7.177392 CCCATTAGAGACTTGAACCTCAAAATT 59.823 37.037 0.00 0.00 35.73 1.82
3568 6182 8.223769 GTCAAACTATCAGTGGCATAATATTCG 58.776 37.037 0.00 0.00 0.00 3.34
3570 6185 8.438513 CAAACTATCAGTGGCATAATATTCGAG 58.561 37.037 0.00 0.00 0.00 4.04
3571 6186 6.102663 ACTATCAGTGGCATAATATTCGAGC 58.897 40.000 0.00 0.00 0.00 5.03
3642 6257 1.761784 AGTTGTCAAATTTGCCAGCCA 59.238 42.857 13.54 2.39 0.00 4.75
3651 6266 4.822685 AATTTGCCAGCCATTGTATCAA 57.177 36.364 0.00 0.00 0.00 2.57
3702 6318 7.869800 TGTTGCCAAAAATTATTTGAATGGTC 58.130 30.769 14.55 9.83 0.00 4.02
3740 6356 5.594317 AGTTTTCAAGCAGTGGATAGTTTGT 59.406 36.000 0.00 0.00 0.00 2.83
3754 6398 6.430925 TGGATAGTTTGTCCATTTCAACAGAG 59.569 38.462 0.00 0.00 40.72 3.35
3761 6405 4.040339 TGTCCATTTCAACAGAGTCTAGCA 59.960 41.667 0.00 0.00 0.00 3.49
3795 6439 9.773328 ATGAATATTTTGATTGACGTGTTGTAG 57.227 29.630 0.00 0.00 0.00 2.74
3892 6544 8.861101 GTGTAGTGAATGTTATGTGTCTTCTAC 58.139 37.037 0.00 0.00 0.00 2.59
3920 6572 4.523083 GGGAAATTACATGTGCCACTAGA 58.477 43.478 9.11 0.00 0.00 2.43
3963 6615 0.941463 GCGAGCCGACCAGTGATATG 60.941 60.000 0.00 0.00 0.00 1.78
4105 6757 4.658901 AGGAAAGGTAAAACTGGAGAGTGA 59.341 41.667 0.00 0.00 30.61 3.41
4108 6760 4.608948 AGGTAAAACTGGAGAGTGAGTG 57.391 45.455 0.00 0.00 30.61 3.51
4150 6802 7.437713 TCATTGTGGTAATAAGATCTGACCT 57.562 36.000 14.22 0.00 0.00 3.85
4153 6805 4.051922 GTGGTAATAAGATCTGACCTGCG 58.948 47.826 14.22 0.00 0.00 5.18
4161 6819 5.353394 AAGATCTGACCTGCGGTATTTTA 57.647 39.130 0.00 0.00 35.25 1.52
4200 6858 2.924290 GCTTGAGACTACATCGGTTGAC 59.076 50.000 0.00 0.00 0.00 3.18
4239 6897 2.299297 GAGAAAAGAACTGTCCGGGAGA 59.701 50.000 0.00 0.00 0.00 3.71
4249 6907 1.829222 TGTCCGGGAGATCTTTGGTAC 59.171 52.381 0.00 1.55 0.00 3.34
4369 7051 9.304731 CACCAAAACACATAATTGGATCATAAG 57.695 33.333 10.50 0.00 45.14 1.73
4375 7057 5.242171 CACATAATTGGATCATAAGCTGGCA 59.758 40.000 0.00 0.00 0.00 4.92
4390 7072 4.021191 GCTGGCAAGCTAACTGAAATAC 57.979 45.455 5.60 0.00 46.60 1.89
4391 7073 3.440173 GCTGGCAAGCTAACTGAAATACA 59.560 43.478 5.60 0.00 46.60 2.29
4397 7079 6.366061 GGCAAGCTAACTGAAATACAAAAAGG 59.634 38.462 0.00 0.00 0.00 3.11
4398 7080 7.145323 GCAAGCTAACTGAAATACAAAAAGGA 58.855 34.615 0.00 0.00 0.00 3.36
4400 7082 9.696917 CAAGCTAACTGAAATACAAAAAGGAAT 57.303 29.630 0.00 0.00 0.00 3.01
4401 7083 9.914131 AAGCTAACTGAAATACAAAAAGGAATC 57.086 29.630 0.00 0.00 0.00 2.52
4402 7084 9.301897 AGCTAACTGAAATACAAAAAGGAATCT 57.698 29.630 0.00 0.00 0.00 2.40
4416 7098 9.971922 CAAAAAGGAATCTTCTATGTCTGTTTT 57.028 29.630 0.00 0.00 31.82 2.43
4427 7109 4.766404 ATGTCTGTTTTTCATTCCGTCC 57.234 40.909 0.00 0.00 0.00 4.79
4428 7110 3.546724 TGTCTGTTTTTCATTCCGTCCA 58.453 40.909 0.00 0.00 0.00 4.02
4437 7119 6.389830 TTTTCATTCCGTCCATTCCATATG 57.610 37.500 0.00 0.00 0.00 1.78
4438 7120 3.411446 TCATTCCGTCCATTCCATATGC 58.589 45.455 0.00 0.00 0.00 3.14
4463 7152 7.679144 CATGACTATAGTTTCATGTCACACAC 58.321 38.462 19.43 0.64 42.80 3.82
4464 7153 6.754193 TGACTATAGTTTCATGTCACACACA 58.246 36.000 6.88 0.00 40.18 3.72
4465 7154 6.645003 TGACTATAGTTTCATGTCACACACAC 59.355 38.462 6.88 0.00 38.04 3.82
4466 7155 6.521162 ACTATAGTTTCATGTCACACACACA 58.479 36.000 0.00 0.00 38.04 3.72
4470 7159 4.333649 AGTTTCATGTCACACACACAGAAG 59.666 41.667 0.00 0.00 38.04 2.85
4479 7168 0.249911 ACACACAGAAGGGCGAACTC 60.250 55.000 0.00 0.00 0.00 3.01
4492 7181 2.685380 AACTCCCTCCGGGCAGAG 60.685 66.667 0.00 7.83 43.94 3.35
4512 7201 2.338015 CGCAGCCAGCAAATCAGGT 61.338 57.895 0.00 0.00 46.13 4.00
4518 7207 0.753111 CCAGCAAATCAGGTAGCCCC 60.753 60.000 0.00 0.00 0.00 5.80
4522 7211 2.024306 GCAAATCAGGTAGCCCCTTCC 61.024 57.143 0.00 0.00 42.73 3.46
4530 7219 1.077805 TAGCCCCTTCCGAGACACA 59.922 57.895 0.00 0.00 0.00 3.72
4550 7239 5.247110 ACACAGAGATTGAGAAGGAGCTAAA 59.753 40.000 0.00 0.00 0.00 1.85
4609 7301 1.895020 TACAGGCCATGTCCGTGTCC 61.895 60.000 5.01 0.00 42.70 4.02
4632 7324 2.644676 GGGCTTGATGAAACCTCCTAC 58.355 52.381 0.00 0.00 0.00 3.18
4658 7350 6.456501 CGAAGAACCCCAGAAGTTATATAGG 58.543 44.000 0.00 0.00 0.00 2.57
4694 7395 1.742761 ATGTGCATCTGAAACCTCCG 58.257 50.000 0.00 0.00 0.00 4.63
4747 7451 1.193426 GTGCGTGAAGAGTTCTCTTGC 59.807 52.381 18.09 15.21 0.00 4.01
4748 7452 1.202521 TGCGTGAAGAGTTCTCTTGCA 60.203 47.619 18.09 17.20 0.00 4.08
4760 7465 4.646492 AGTTCTCTTGCAATTTTCCTGTGT 59.354 37.500 0.00 0.00 0.00 3.72
4764 7469 5.769662 TCTCTTGCAATTTTCCTGTGTATGT 59.230 36.000 0.00 0.00 0.00 2.29
4794 7499 9.037737 TGTACTTTGTACAGTTAATCTTGTCAC 57.962 33.333 6.48 0.00 0.00 3.67
4810 7517 7.172868 TCTTGTCACCATAATGCAAATCATT 57.827 32.000 0.00 0.00 46.48 2.57
4817 7524 5.070313 ACCATAATGCAAATCATTACACCCC 59.930 40.000 0.00 0.00 46.88 4.95
4846 7553 0.777446 TTAGCCAAGAGCCCCAGTTT 59.223 50.000 0.00 0.00 45.47 2.66
4862 7569 2.954684 TTTCCCATCCTCGTGCGCT 61.955 57.895 9.73 0.00 0.00 5.92
4870 7577 1.956170 CCTCGTGCGCTTGACTGTT 60.956 57.895 9.73 0.00 0.00 3.16
4883 7590 0.037326 GACTGTTGTCGATGCTGGGA 60.037 55.000 0.00 0.00 33.15 4.37
4884 7591 0.615331 ACTGTTGTCGATGCTGGGAT 59.385 50.000 0.00 0.00 0.00 3.85
4900 7607 2.532250 GGATTTTCCCATGGGTCTGT 57.468 50.000 30.28 15.16 36.47 3.41
4901 7608 2.820178 GGATTTTCCCATGGGTCTGTT 58.180 47.619 30.28 12.68 36.47 3.16
4902 7609 3.173151 GGATTTTCCCATGGGTCTGTTT 58.827 45.455 30.28 11.60 36.47 2.83
4903 7610 4.349365 GGATTTTCCCATGGGTCTGTTTA 58.651 43.478 30.28 6.30 36.47 2.01
4904 7611 4.402474 GGATTTTCCCATGGGTCTGTTTAG 59.598 45.833 30.28 1.23 36.47 1.85
4905 7612 3.449746 TTTCCCATGGGTCTGTTTAGG 57.550 47.619 30.28 0.42 36.47 2.69
4906 7613 2.352561 TCCCATGGGTCTGTTTAGGA 57.647 50.000 30.28 3.80 36.47 2.94
4907 7614 1.913419 TCCCATGGGTCTGTTTAGGAC 59.087 52.381 30.28 0.00 36.47 3.85
4908 7615 1.633432 CCCATGGGTCTGTTTAGGACA 59.367 52.381 23.93 0.00 35.61 4.02
4909 7616 2.618045 CCCATGGGTCTGTTTAGGACAC 60.618 54.545 23.93 0.00 37.60 3.67
4912 7619 3.695830 TGGGTCTGTTTAGGACACATC 57.304 47.619 0.00 0.00 41.46 3.06
4913 7620 3.248024 TGGGTCTGTTTAGGACACATCT 58.752 45.455 0.00 0.00 41.46 2.90
4914 7621 4.422057 TGGGTCTGTTTAGGACACATCTA 58.578 43.478 0.00 0.00 41.46 1.98
4915 7622 4.466370 TGGGTCTGTTTAGGACACATCTAG 59.534 45.833 0.00 0.00 41.46 2.43
4916 7623 4.710375 GGGTCTGTTTAGGACACATCTAGA 59.290 45.833 0.00 0.00 37.11 2.43
4917 7624 5.364157 GGGTCTGTTTAGGACACATCTAGAT 59.636 44.000 0.00 0.00 37.11 1.98
4918 7625 6.276847 GGTCTGTTTAGGACACATCTAGATG 58.723 44.000 27.63 27.63 44.15 2.90
4943 7650 9.914131 TGTGACATAGTTATATCACATCTAAGC 57.086 33.333 8.71 0.00 44.88 3.09
4958 7665 6.389830 CATCTAAGCTGATGTCTACTCTGT 57.610 41.667 5.99 0.00 39.05 3.41
4959 7666 6.804677 CATCTAAGCTGATGTCTACTCTGTT 58.195 40.000 5.99 0.00 39.05 3.16
4960 7667 6.842437 TCTAAGCTGATGTCTACTCTGTTT 57.158 37.500 0.00 0.00 0.00 2.83
4961 7668 6.625362 TCTAAGCTGATGTCTACTCTGTTTG 58.375 40.000 0.00 0.00 0.00 2.93
4962 7669 4.881019 AGCTGATGTCTACTCTGTTTGT 57.119 40.909 0.00 0.00 0.00 2.83
4963 7670 4.564041 AGCTGATGTCTACTCTGTTTGTG 58.436 43.478 0.00 0.00 0.00 3.33
4964 7671 3.681897 GCTGATGTCTACTCTGTTTGTGG 59.318 47.826 0.00 0.00 0.00 4.17
4965 7672 4.800914 GCTGATGTCTACTCTGTTTGTGGT 60.801 45.833 0.00 0.00 0.00 4.16
4966 7673 4.883083 TGATGTCTACTCTGTTTGTGGTC 58.117 43.478 0.00 0.00 0.00 4.02
4967 7674 4.588951 TGATGTCTACTCTGTTTGTGGTCT 59.411 41.667 0.00 0.00 0.00 3.85
4968 7675 5.773176 TGATGTCTACTCTGTTTGTGGTCTA 59.227 40.000 0.00 0.00 0.00 2.59
4969 7676 6.437477 TGATGTCTACTCTGTTTGTGGTCTAT 59.563 38.462 0.00 0.00 0.00 1.98
4970 7677 6.665992 TGTCTACTCTGTTTGTGGTCTATT 57.334 37.500 0.00 0.00 0.00 1.73
4971 7678 7.062749 TGTCTACTCTGTTTGTGGTCTATTT 57.937 36.000 0.00 0.00 0.00 1.40
4972 7679 7.506114 TGTCTACTCTGTTTGTGGTCTATTTT 58.494 34.615 0.00 0.00 0.00 1.82
4973 7680 7.990886 TGTCTACTCTGTTTGTGGTCTATTTTT 59.009 33.333 0.00 0.00 0.00 1.94
5009 7716 5.876612 TTTTTGTTTCTTGTTGCTGCATT 57.123 30.435 1.84 0.00 0.00 3.56
5010 7717 6.974932 TTTTTGTTTCTTGTTGCTGCATTA 57.025 29.167 1.84 0.00 0.00 1.90
5011 7718 7.551035 TTTTTGTTTCTTGTTGCTGCATTAT 57.449 28.000 1.84 0.00 0.00 1.28
5012 7719 8.654230 TTTTTGTTTCTTGTTGCTGCATTATA 57.346 26.923 1.84 0.00 0.00 0.98
5013 7720 8.830201 TTTTGTTTCTTGTTGCTGCATTATAT 57.170 26.923 1.84 0.00 0.00 0.86
5014 7721 9.920133 TTTTGTTTCTTGTTGCTGCATTATATA 57.080 25.926 1.84 0.00 0.00 0.86
5017 7724 9.518906 TGTTTCTTGTTGCTGCATTATATATTG 57.481 29.630 1.84 1.04 0.00 1.90
5018 7725 8.971321 GTTTCTTGTTGCTGCATTATATATTGG 58.029 33.333 1.84 0.00 0.00 3.16
5019 7726 7.822161 TCTTGTTGCTGCATTATATATTGGT 57.178 32.000 1.84 0.00 0.00 3.67
5020 7727 7.650890 TCTTGTTGCTGCATTATATATTGGTG 58.349 34.615 1.84 0.00 0.00 4.17
5021 7728 6.330004 TGTTGCTGCATTATATATTGGTGG 57.670 37.500 1.84 0.00 0.00 4.61
5022 7729 5.243507 TGTTGCTGCATTATATATTGGTGGG 59.756 40.000 1.84 0.00 0.00 4.61
5023 7730 5.253991 TGCTGCATTATATATTGGTGGGA 57.746 39.130 0.00 0.00 0.00 4.37
5024 7731 5.255687 TGCTGCATTATATATTGGTGGGAG 58.744 41.667 0.00 0.00 0.00 4.30
5025 7732 4.096984 GCTGCATTATATATTGGTGGGAGC 59.903 45.833 0.00 0.00 0.00 4.70
5026 7733 5.503927 CTGCATTATATATTGGTGGGAGCT 58.496 41.667 6.73 0.00 0.00 4.09
5027 7734 5.891198 TGCATTATATATTGGTGGGAGCTT 58.109 37.500 6.73 0.00 0.00 3.74
5028 7735 7.026697 TGCATTATATATTGGTGGGAGCTTA 57.973 36.000 6.73 0.00 0.00 3.09
5029 7736 7.112122 TGCATTATATATTGGTGGGAGCTTAG 58.888 38.462 6.73 0.00 0.00 2.18
5030 7737 7.037658 TGCATTATATATTGGTGGGAGCTTAGA 60.038 37.037 6.73 0.00 0.00 2.10
5031 7738 7.995488 GCATTATATATTGGTGGGAGCTTAGAT 59.005 37.037 6.73 0.00 0.00 1.98
5032 7739 9.334947 CATTATATATTGGTGGGAGCTTAGATG 57.665 37.037 0.00 0.00 0.00 2.90
5033 7740 6.959606 ATATATTGGTGGGAGCTTAGATGT 57.040 37.500 0.00 0.00 0.00 3.06
5034 7741 2.787473 TTGGTGGGAGCTTAGATGTG 57.213 50.000 0.00 0.00 0.00 3.21
5035 7742 1.951209 TGGTGGGAGCTTAGATGTGA 58.049 50.000 0.00 0.00 0.00 3.58
5036 7743 2.481441 TGGTGGGAGCTTAGATGTGAT 58.519 47.619 0.00 0.00 0.00 3.06
5037 7744 3.653164 TGGTGGGAGCTTAGATGTGATA 58.347 45.455 0.00 0.00 0.00 2.15
5038 7745 4.234550 TGGTGGGAGCTTAGATGTGATAT 58.765 43.478 0.00 0.00 0.00 1.63
5039 7746 4.284490 TGGTGGGAGCTTAGATGTGATATC 59.716 45.833 0.00 0.00 0.00 1.63
5040 7747 4.323104 GGTGGGAGCTTAGATGTGATATCC 60.323 50.000 0.00 0.00 0.00 2.59
5041 7748 4.530161 GTGGGAGCTTAGATGTGATATCCT 59.470 45.833 0.00 0.00 0.00 3.24
5042 7749 5.012561 GTGGGAGCTTAGATGTGATATCCTT 59.987 44.000 0.00 0.00 0.00 3.36
5043 7750 6.211584 GTGGGAGCTTAGATGTGATATCCTTA 59.788 42.308 0.00 0.00 0.00 2.69
5044 7751 6.211584 TGGGAGCTTAGATGTGATATCCTTAC 59.788 42.308 0.00 0.00 0.00 2.34
5045 7752 6.211584 GGGAGCTTAGATGTGATATCCTTACA 59.788 42.308 0.00 0.00 0.00 2.41
5046 7753 7.319646 GGAGCTTAGATGTGATATCCTTACAG 58.680 42.308 0.00 0.00 0.00 2.74
5047 7754 7.177568 GGAGCTTAGATGTGATATCCTTACAGA 59.822 40.741 0.00 0.00 0.00 3.41
5048 7755 8.484214 AGCTTAGATGTGATATCCTTACAGAA 57.516 34.615 0.00 0.00 0.00 3.02
5049 7756 8.364142 AGCTTAGATGTGATATCCTTACAGAAC 58.636 37.037 0.00 0.00 0.00 3.01
5050 7757 8.144478 GCTTAGATGTGATATCCTTACAGAACA 58.856 37.037 0.00 0.00 0.00 3.18
5053 7760 8.489676 AGATGTGATATCCTTACAGAACATCT 57.510 34.615 18.35 18.35 44.92 2.90
5054 7761 9.593565 AGATGTGATATCCTTACAGAACATCTA 57.406 33.333 20.83 0.00 46.74 1.98
5055 7762 9.853555 GATGTGATATCCTTACAGAACATCTAG 57.146 37.037 15.85 0.00 39.54 2.43
5056 7763 8.996651 TGTGATATCCTTACAGAACATCTAGA 57.003 34.615 0.00 0.00 0.00 2.43
5057 7764 9.593565 TGTGATATCCTTACAGAACATCTAGAT 57.406 33.333 0.00 0.00 0.00 1.98
5058 7765 9.853555 GTGATATCCTTACAGAACATCTAGATG 57.146 37.037 27.63 27.63 44.15 2.90
5075 7782 9.376075 CATCTAGATGTGAATTAGACAAACTGT 57.624 33.333 22.42 0.00 34.23 3.55
5076 7783 9.950496 ATCTAGATGTGAATTAGACAAACTGTT 57.050 29.630 3.89 0.00 0.00 3.16
5077 7784 9.778741 TCTAGATGTGAATTAGACAAACTGTTT 57.221 29.630 0.00 0.00 0.00 2.83
5079 7786 7.875971 AGATGTGAATTAGACAAACTGTTTCC 58.124 34.615 2.13 0.00 0.00 3.13
5080 7787 6.385649 TGTGAATTAGACAAACTGTTTCCC 57.614 37.500 2.13 0.00 0.00 3.97
5081 7788 5.888724 TGTGAATTAGACAAACTGTTTCCCA 59.111 36.000 2.13 0.00 0.00 4.37
5232 7972 8.247562 CCTAGCTGTTAAGTGATCAGGATATAC 58.752 40.741 0.00 0.00 0.00 1.47
5242 7982 6.621514 AGTGATCAGGATATACCCCTTTTTCT 59.378 38.462 0.00 0.00 40.05 2.52
5244 7984 7.445707 GTGATCAGGATATACCCCTTTTTCTTC 59.554 40.741 0.00 0.00 40.05 2.87
5284 8025 1.463674 ATCCGTCCCACTGAAAATGC 58.536 50.000 0.00 0.00 0.00 3.56
5323 8064 3.983344 GCAGCGTCAATTTTTGAAGTCAT 59.017 39.130 5.35 0.00 42.15 3.06
5485 8459 4.396854 GGTACGATCCACTGCGAC 57.603 61.111 0.00 0.00 0.00 5.19
5486 8460 1.509463 GGTACGATCCACTGCGACA 59.491 57.895 0.00 0.00 0.00 4.35
5522 8496 2.416836 CCGGTTGTTCATCTAGAAGCGA 60.417 50.000 11.83 0.19 40.73 4.93
5549 8523 2.878580 CTCACAAGCAACAACAAAGCA 58.121 42.857 0.00 0.00 0.00 3.91
5552 8526 1.134729 ACAAGCAACAACAAAGCAGGG 60.135 47.619 0.00 0.00 0.00 4.45
5553 8527 0.465287 AAGCAACAACAAAGCAGGGG 59.535 50.000 0.00 0.00 0.00 4.79
5554 8528 1.069596 GCAACAACAAAGCAGGGGG 59.930 57.895 0.00 0.00 0.00 5.40
5569 8543 3.754766 GGGGGACATCAGTCGTAAC 57.245 57.895 0.00 0.00 45.92 2.50
5570 8544 0.177373 GGGGGACATCAGTCGTAACC 59.823 60.000 0.00 0.00 45.92 2.85
5571 8545 0.177373 GGGGACATCAGTCGTAACCC 59.823 60.000 0.00 0.00 45.92 4.11
5572 8546 0.177373 GGGACATCAGTCGTAACCCC 59.823 60.000 0.00 0.00 45.92 4.95
5573 8547 1.192428 GGACATCAGTCGTAACCCCT 58.808 55.000 0.00 0.00 45.92 4.79
5574 8548 1.136500 GGACATCAGTCGTAACCCCTC 59.864 57.143 0.00 0.00 45.92 4.30
5575 8549 2.100989 GACATCAGTCGTAACCCCTCT 58.899 52.381 0.00 0.00 34.60 3.69
5576 8550 2.099427 GACATCAGTCGTAACCCCTCTC 59.901 54.545 0.00 0.00 34.60 3.20
5577 8551 2.291670 ACATCAGTCGTAACCCCTCTCT 60.292 50.000 0.00 0.00 0.00 3.10
5578 8552 2.125773 TCAGTCGTAACCCCTCTCTC 57.874 55.000 0.00 0.00 0.00 3.20
5579 8553 1.104630 CAGTCGTAACCCCTCTCTCC 58.895 60.000 0.00 0.00 0.00 3.71
5580 8554 1.001282 AGTCGTAACCCCTCTCTCCT 58.999 55.000 0.00 0.00 0.00 3.69
5581 8555 1.104630 GTCGTAACCCCTCTCTCCTG 58.895 60.000 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 71 6.867816 TGACATTGATGTTGCTCCATAAAAAC 59.132 34.615 0.00 0.00 41.95 2.43
112 117 4.881273 ACATGTTCACTTGTTCTAGTTGCA 59.119 37.500 0.00 0.00 31.23 4.08
149 154 6.603997 ACCCGGATAAACAAATGCATAAGTAA 59.396 34.615 0.73 0.00 0.00 2.24
155 160 2.159114 GCACCCGGATAAACAAATGCAT 60.159 45.455 0.73 0.00 0.00 3.96
206 212 7.321717 AGATGGCTTAATAGGTATGATGTGT 57.678 36.000 0.00 0.00 0.00 3.72
257 1170 0.373716 GTGGTCCGCGATTCACATTC 59.626 55.000 8.23 0.00 0.00 2.67
277 1446 1.605710 CACTGAAGCTCACAACTTGGG 59.394 52.381 0.00 0.00 0.00 4.12
290 1459 4.158764 ACGGAGAGAGAATAACCACTGAAG 59.841 45.833 0.00 0.00 0.00 3.02
292 1461 3.698289 ACGGAGAGAGAATAACCACTGA 58.302 45.455 0.00 0.00 0.00 3.41
293 1462 4.082190 TGAACGGAGAGAGAATAACCACTG 60.082 45.833 0.00 0.00 0.00 3.66
295 1464 4.451629 TGAACGGAGAGAGAATAACCAC 57.548 45.455 0.00 0.00 0.00 4.16
296 1465 4.141937 CCATGAACGGAGAGAGAATAACCA 60.142 45.833 0.00 0.00 0.00 3.67
297 1466 4.372656 CCATGAACGGAGAGAGAATAACC 58.627 47.826 0.00 0.00 0.00 2.85
338 1825 2.644992 CGACAGCTGGTTTTGGCC 59.355 61.111 19.93 0.00 0.00 5.36
339 1826 2.644992 CCGACAGCTGGTTTTGGC 59.355 61.111 19.93 0.00 0.00 4.52
340 1827 2.268076 CCCCGACAGCTGGTTTTGG 61.268 63.158 19.93 10.33 0.00 3.28
341 1828 2.919494 GCCCCGACAGCTGGTTTTG 61.919 63.158 19.93 4.55 0.00 2.44
342 1829 2.597510 GCCCCGACAGCTGGTTTT 60.598 61.111 19.93 0.00 0.00 2.43
355 1844 2.359975 CCCTGTCTTGAACGCCCC 60.360 66.667 0.00 0.00 0.00 5.80
388 1877 2.301296 CAATGAGAGGTATGGCGGATCT 59.699 50.000 0.00 0.00 0.00 2.75
393 1882 1.869767 GCTTCAATGAGAGGTATGGCG 59.130 52.381 0.00 0.00 0.00 5.69
490 1980 5.884792 CCTTAGCATTTTGGAGACATTCTCT 59.115 40.000 3.30 0.00 42.95 3.10
491 1981 5.449725 GCCTTAGCATTTTGGAGACATTCTC 60.450 44.000 0.00 0.00 39.87 2.87
552 2052 0.529378 GACCTGCCTGAAAATGCCAG 59.471 55.000 0.00 0.00 0.00 4.85
567 2071 4.016706 CGGACCGGGCAAAGACCT 62.017 66.667 11.00 0.00 0.00 3.85
587 2091 0.110823 GCGAGTGCTGTTTTACACGG 60.111 55.000 0.00 0.00 41.72 4.94
645 2456 4.293648 TCTGTGTGTGCCGGTCGG 62.294 66.667 1.90 4.85 38.57 4.79
646 2457 2.734723 CTCTGTGTGTGCCGGTCG 60.735 66.667 1.90 0.00 0.00 4.79
647 2458 3.044305 GCTCTGTGTGTGCCGGTC 61.044 66.667 1.90 0.00 0.00 4.79
654 2492 2.256764 CGAGCTCGCTCTGTGTGT 59.743 61.111 25.07 0.00 40.69 3.72
660 2498 4.427661 GGCACACGAGCTCGCTCT 62.428 66.667 34.83 14.30 44.43 4.09
679 2517 1.281960 CGGTACACGCTAGATCGGG 59.718 63.158 0.00 0.00 39.10 5.14
710 2548 3.005539 GCTGAGCCCTCTCCACCA 61.006 66.667 0.00 0.00 38.58 4.17
774 2612 1.613255 GGCTTGGGTCGATTTCAAGGA 60.613 52.381 19.53 0.00 38.52 3.36
901 2744 5.947566 TGAATCAATGGATGAAGCAAAGAGA 59.052 36.000 0.00 0.00 42.54 3.10
910 2753 7.576403 TCAGAACCTATGAATCAATGGATGAA 58.424 34.615 10.93 0.00 42.54 2.57
913 2756 9.075678 GATTTCAGAACCTATGAATCAATGGAT 57.924 33.333 10.93 0.53 36.60 3.41
921 2764 5.399497 CCCTGGGATTTCAGAACCTATGAAT 60.399 44.000 7.01 0.00 36.60 2.57
1203 3052 3.252701 GCTAGCATAGGTGTACTCGCTAA 59.747 47.826 10.63 0.00 38.87 3.09
1204 3053 2.812591 GCTAGCATAGGTGTACTCGCTA 59.187 50.000 10.63 0.00 39.70 4.26
1205 3054 1.609555 GCTAGCATAGGTGTACTCGCT 59.390 52.381 10.63 0.00 39.70 4.93
1206 3055 1.663445 CGCTAGCATAGGTGTACTCGC 60.663 57.143 16.45 0.00 39.70 5.03
1207 3056 1.602851 ACGCTAGCATAGGTGTACTCG 59.397 52.381 16.45 0.00 39.70 4.18
1265 3114 9.699410 ATAAGGAAACAATAATCACAATCTCCA 57.301 29.630 0.00 0.00 0.00 3.86
1277 3126 7.662897 GTTCCACAACCATAAGGAAACAATAA 58.337 34.615 0.00 0.00 41.42 1.40
1278 3127 7.222000 GTTCCACAACCATAAGGAAACAATA 57.778 36.000 0.00 0.00 41.42 1.90
1279 3128 6.096673 GTTCCACAACCATAAGGAAACAAT 57.903 37.500 0.00 0.00 41.42 2.71
1280 3129 5.523438 GTTCCACAACCATAAGGAAACAA 57.477 39.130 0.00 0.00 41.42 2.83
1303 3158 0.319555 TCCGGTTCGTTTCAGAGCAG 60.320 55.000 0.00 0.00 0.00 4.24
1322 3177 5.136105 GCTATTGGAGATTTGGAGGTCAAT 58.864 41.667 0.00 0.00 34.98 2.57
1349 3204 2.693591 AGCATGGAATGGCTTCAATGAG 59.306 45.455 14.44 0.00 46.86 2.90
1398 3253 6.591001 TCTGGCATGCTTTAATAGTACATGA 58.409 36.000 18.92 0.47 40.39 3.07
1627 3482 9.681692 CACTTAAATCTGTTGACATTTGATTGA 57.318 29.630 0.00 0.00 0.00 2.57
1927 3784 5.001232 GTCACTGGTGCAGTTTTAGGATTA 58.999 41.667 0.00 0.00 42.59 1.75
1928 3785 3.821033 GTCACTGGTGCAGTTTTAGGATT 59.179 43.478 0.00 0.00 42.59 3.01
1938 3795 2.462456 ATGTACTGTCACTGGTGCAG 57.538 50.000 17.05 17.05 39.17 4.41
1940 3797 4.568152 AAAAATGTACTGTCACTGGTGC 57.432 40.909 0.00 0.00 0.00 5.01
1998 3871 6.160576 ACTAGCATCAACACCACAATTTTT 57.839 33.333 0.00 0.00 0.00 1.94
2002 3875 5.509501 CCAAAACTAGCATCAACACCACAAT 60.510 40.000 0.00 0.00 0.00 2.71
2050 3928 8.770438 AGCTAGAGATTCAAACTAACAAGAAG 57.230 34.615 0.00 0.00 0.00 2.85
2059 3937 5.486526 CCACAGAAGCTAGAGATTCAAACT 58.513 41.667 9.97 0.00 42.42 2.66
2065 3943 4.555689 AGATCCCACAGAAGCTAGAGATT 58.444 43.478 0.00 0.00 0.00 2.40
2072 3950 2.641815 ACAAGAAGATCCCACAGAAGCT 59.358 45.455 0.00 0.00 0.00 3.74
2073 3951 3.006247 GACAAGAAGATCCCACAGAAGC 58.994 50.000 0.00 0.00 0.00 3.86
2075 3953 3.390967 TGTGACAAGAAGATCCCACAGAA 59.609 43.478 0.00 0.00 31.81 3.02
2077 3955 3.332919 CTGTGACAAGAAGATCCCACAG 58.667 50.000 0.00 0.00 43.29 3.66
2079 3957 3.594134 CTCTGTGACAAGAAGATCCCAC 58.406 50.000 0.00 0.00 0.00 4.61
2081 3959 2.093235 CCCTCTGTGACAAGAAGATCCC 60.093 54.545 0.00 0.00 0.00 3.85
2082 3960 2.569404 ACCCTCTGTGACAAGAAGATCC 59.431 50.000 0.00 0.00 0.00 3.36
2083 3961 3.971245 ACCCTCTGTGACAAGAAGATC 57.029 47.619 0.00 0.00 0.00 2.75
2095 3973 4.752063 TCTATATACATGGCACCCTCTGT 58.248 43.478 0.00 0.00 0.00 3.41
2096 3974 5.188555 ACATCTATATACATGGCACCCTCTG 59.811 44.000 0.00 0.00 0.00 3.35
2097 3975 5.345418 ACATCTATATACATGGCACCCTCT 58.655 41.667 0.00 0.00 0.00 3.69
2098 3976 5.683876 ACATCTATATACATGGCACCCTC 57.316 43.478 0.00 0.00 0.00 4.30
2099 3977 7.568128 TTTACATCTATATACATGGCACCCT 57.432 36.000 0.00 0.00 0.00 4.34
2100 3978 8.677300 CATTTTACATCTATATACATGGCACCC 58.323 37.037 0.00 0.00 0.00 4.61
2101 3979 8.677300 CCATTTTACATCTATATACATGGCACC 58.323 37.037 0.00 0.00 0.00 5.01
2102 3980 9.448438 TCCATTTTACATCTATATACATGGCAC 57.552 33.333 0.00 0.00 30.58 5.01
2169 4047 7.934120 CCTTCCAAAACCAAAAACCATGTTATA 59.066 33.333 0.00 0.00 0.00 0.98
2184 4062 1.408969 TGCCAAGACCTTCCAAAACC 58.591 50.000 0.00 0.00 0.00 3.27
2213 4092 3.744660 CTTTGTACTTGTTCTCAGGCCT 58.255 45.455 0.00 0.00 0.00 5.19
2217 4096 3.058639 GGCAGCTTTGTACTTGTTCTCAG 60.059 47.826 0.00 0.00 0.00 3.35
2292 4180 4.813296 AAACAAACAGACGACAGGAATC 57.187 40.909 0.00 0.00 0.00 2.52
2293 4181 5.587043 TGTAAAACAAACAGACGACAGGAAT 59.413 36.000 0.00 0.00 0.00 3.01
2294 4182 4.936411 TGTAAAACAAACAGACGACAGGAA 59.064 37.500 0.00 0.00 0.00 3.36
2295 4183 4.505808 TGTAAAACAAACAGACGACAGGA 58.494 39.130 0.00 0.00 0.00 3.86
2302 4190 4.364415 TGGCACTGTAAAACAAACAGAC 57.636 40.909 10.02 2.21 45.89 3.51
2329 4221 6.043938 TGAGCCCTCCGATACCTAAATTTAAT 59.956 38.462 0.00 0.00 0.00 1.40
2336 4230 2.037144 GTTGAGCCCTCCGATACCTAA 58.963 52.381 0.00 0.00 0.00 2.69
2427 4321 7.459795 TCCAGCACACTAGATCTATAAGATG 57.540 40.000 2.11 3.35 34.53 2.90
2431 4325 7.839680 TTGATCCAGCACACTAGATCTATAA 57.160 36.000 2.11 0.00 40.50 0.98
2433 4327 6.737720 TTTGATCCAGCACACTAGATCTAT 57.262 37.500 2.11 0.00 40.50 1.98
2524 4420 4.089351 GGCACAAATGTATAACGCAAACAC 59.911 41.667 0.00 0.00 0.00 3.32
2550 4454 3.119280 TGTTATTGCGAGTCGAGGATTGA 60.119 43.478 18.61 0.00 0.00 2.57
2558 4463 5.346011 AGCATATACATGTTATTGCGAGTCG 59.654 40.000 8.54 8.54 34.40 4.18
2578 4483 9.411801 CAAGTTGACGTAAGATGTATATAGCAT 57.588 33.333 0.00 0.00 43.62 3.79
2648 4601 9.265938 CGAATTTACACAAGTTGACATAAGATG 57.734 33.333 10.54 0.00 0.00 2.90
2649 4602 8.999431 ACGAATTTACACAAGTTGACATAAGAT 58.001 29.630 10.54 0.00 0.00 2.40
2650 4603 8.373048 ACGAATTTACACAAGTTGACATAAGA 57.627 30.769 10.54 0.00 0.00 2.10
2653 4606 8.172484 GCATACGAATTTACACAAGTTGACATA 58.828 33.333 10.54 0.00 0.00 2.29
2654 4607 7.021196 GCATACGAATTTACACAAGTTGACAT 58.979 34.615 10.54 0.00 0.00 3.06
2655 4608 6.203915 AGCATACGAATTTACACAAGTTGACA 59.796 34.615 10.54 0.00 0.00 3.58
2656 4609 6.599437 AGCATACGAATTTACACAAGTTGAC 58.401 36.000 10.54 0.00 0.00 3.18
2657 4610 6.795098 AGCATACGAATTTACACAAGTTGA 57.205 33.333 10.54 0.00 0.00 3.18
2658 4611 8.942669 TTTAGCATACGAATTTACACAAGTTG 57.057 30.769 0.00 0.00 0.00 3.16
2660 4613 9.769093 GAATTTAGCATACGAATTTACACAAGT 57.231 29.630 0.00 0.00 0.00 3.16
2661 4614 9.767684 TGAATTTAGCATACGAATTTACACAAG 57.232 29.630 0.00 0.00 0.00 3.16
2663 4616 9.715123 CATGAATTTAGCATACGAATTTACACA 57.285 29.630 0.00 0.00 0.00 3.72
2664 4617 9.716507 ACATGAATTTAGCATACGAATTTACAC 57.283 29.630 0.00 0.00 0.00 2.90
2703 4656 8.997621 AACACAAGTTGACGTAAGATGTATAT 57.002 30.769 10.54 0.00 37.41 0.86
2704 4657 9.911138 TTAACACAAGTTGACGTAAGATGTATA 57.089 29.630 10.54 0.00 38.69 1.47
2705 4658 8.821147 TTAACACAAGTTGACGTAAGATGTAT 57.179 30.769 10.54 0.00 38.69 2.29
2706 4659 8.821147 ATTAACACAAGTTGACGTAAGATGTA 57.179 30.769 10.54 0.00 38.69 2.29
2707 4660 7.724305 ATTAACACAAGTTGACGTAAGATGT 57.276 32.000 10.54 0.00 38.69 3.06
2708 4661 9.445786 AAAATTAACACAAGTTGACGTAAGATG 57.554 29.630 10.54 0.00 38.69 2.90
2709 4662 9.445786 CAAAATTAACACAAGTTGACGTAAGAT 57.554 29.630 10.54 0.00 38.69 2.40
2710 4663 7.429920 GCAAAATTAACACAAGTTGACGTAAGA 59.570 33.333 10.54 0.00 38.69 2.10
2711 4664 7.431084 AGCAAAATTAACACAAGTTGACGTAAG 59.569 33.333 10.54 0.00 38.69 2.34
2712 4665 7.251994 AGCAAAATTAACACAAGTTGACGTAA 58.748 30.769 10.54 4.81 38.69 3.18
2713 4666 6.787225 AGCAAAATTAACACAAGTTGACGTA 58.213 32.000 10.54 0.00 38.69 3.57
2714 4667 5.646606 AGCAAAATTAACACAAGTTGACGT 58.353 33.333 10.54 3.31 38.69 4.34
2715 4668 7.672351 TTAGCAAAATTAACACAAGTTGACG 57.328 32.000 10.54 2.63 38.69 4.35
2765 4718 9.265938 CGAATTAACACAAGTTGATGTAAGATG 57.734 33.333 10.54 0.00 38.69 2.90
2766 4719 8.999431 ACGAATTAACACAAGTTGATGTAAGAT 58.001 29.630 10.54 3.52 38.69 2.40
2767 4720 8.373048 ACGAATTAACACAAGTTGATGTAAGA 57.627 30.769 10.54 1.53 38.69 2.10
2770 4723 8.172484 GCATACGAATTAACACAAGTTGATGTA 58.828 33.333 10.54 0.00 38.69 2.29
2771 4724 7.021196 GCATACGAATTAACACAAGTTGATGT 58.979 34.615 10.54 7.51 38.69 3.06
2772 4725 7.243487 AGCATACGAATTAACACAAGTTGATG 58.757 34.615 10.54 6.87 38.69 3.07
2773 4726 7.377766 AGCATACGAATTAACACAAGTTGAT 57.622 32.000 10.54 0.00 38.69 2.57
2774 4727 6.795098 AGCATACGAATTAACACAAGTTGA 57.205 33.333 10.54 0.00 38.69 3.18
2775 4728 8.942669 TTTAGCATACGAATTAACACAAGTTG 57.057 30.769 0.00 0.00 38.69 3.16
2777 4730 9.769093 GAATTTAGCATACGAATTAACACAAGT 57.231 29.630 0.00 0.00 0.00 3.16
2778 4731 9.767684 TGAATTTAGCATACGAATTAACACAAG 57.232 29.630 0.00 0.00 0.00 3.16
2780 4733 9.715123 CATGAATTTAGCATACGAATTAACACA 57.285 29.630 0.00 0.00 0.00 3.72
2781 4734 9.716507 ACATGAATTTAGCATACGAATTAACAC 57.283 29.630 0.00 0.00 0.00 3.32
2820 4773 8.997621 AACACAAGTTGACGTAAGATGTATAT 57.002 30.769 10.54 0.00 37.41 0.86
2821 4774 8.821147 AAACACAAGTTGACGTAAGATGTATA 57.179 30.769 10.54 0.00 38.17 1.47
2822 4775 7.724305 AAACACAAGTTGACGTAAGATGTAT 57.276 32.000 10.54 0.00 38.17 2.29
2823 4776 8.821147 ATAAACACAAGTTGACGTAAGATGTA 57.179 30.769 10.54 0.00 38.17 2.29
2824 4777 7.095355 GGATAAACACAAGTTGACGTAAGATGT 60.095 37.037 10.54 0.00 38.17 3.06
2825 4778 7.234384 GGATAAACACAAGTTGACGTAAGATG 58.766 38.462 10.54 0.00 38.17 2.90
2826 4779 6.090358 CGGATAAACACAAGTTGACGTAAGAT 59.910 38.462 10.54 1.44 38.17 2.40
2827 4780 5.403166 CGGATAAACACAAGTTGACGTAAGA 59.597 40.000 10.54 0.00 38.17 2.10
2828 4781 5.176223 ACGGATAAACACAAGTTGACGTAAG 59.824 40.000 10.54 0.00 38.17 2.34
2829 4782 5.049167 ACGGATAAACACAAGTTGACGTAA 58.951 37.500 10.54 0.00 38.17 3.18
2830 4783 4.619973 ACGGATAAACACAAGTTGACGTA 58.380 39.130 10.54 0.00 38.17 3.57
2831 4784 3.460103 ACGGATAAACACAAGTTGACGT 58.540 40.909 10.54 3.31 38.17 4.34
2832 4785 5.547341 CATACGGATAAACACAAGTTGACG 58.453 41.667 10.54 2.63 38.17 4.35
2833 4786 5.121768 AGCATACGGATAAACACAAGTTGAC 59.878 40.000 10.54 0.00 38.17 3.18
2834 4787 5.242434 AGCATACGGATAAACACAAGTTGA 58.758 37.500 10.54 0.00 38.17 3.18
2835 4788 5.545658 AGCATACGGATAAACACAAGTTG 57.454 39.130 0.00 0.00 38.17 3.16
2836 4789 7.675962 TTTAGCATACGGATAAACACAAGTT 57.324 32.000 0.00 0.00 40.40 2.66
2837 4790 7.859325 ATTTAGCATACGGATAAACACAAGT 57.141 32.000 0.00 0.00 39.90 3.16
2838 4791 8.394877 TGAATTTAGCATACGGATAAACACAAG 58.605 33.333 0.00 0.00 39.90 3.16
2839 4792 8.270080 TGAATTTAGCATACGGATAAACACAA 57.730 30.769 0.00 0.00 39.90 3.33
2840 4793 7.851387 TGAATTTAGCATACGGATAAACACA 57.149 32.000 0.00 0.00 39.90 3.72
2841 4794 8.342634 ACATGAATTTAGCATACGGATAAACAC 58.657 33.333 0.00 0.00 39.90 3.32
2842 4795 8.445275 ACATGAATTTAGCATACGGATAAACA 57.555 30.769 0.00 0.00 39.90 2.83
2845 4798 9.549078 TGTAACATGAATTTAGCATACGGATAA 57.451 29.630 0.00 0.00 0.00 1.75
2846 4799 9.549078 TTGTAACATGAATTTAGCATACGGATA 57.451 29.630 0.00 0.00 0.00 2.59
2847 4800 8.445275 TTGTAACATGAATTTAGCATACGGAT 57.555 30.769 0.00 0.00 0.00 4.18
2848 4801 7.851387 TTGTAACATGAATTTAGCATACGGA 57.149 32.000 0.00 0.00 0.00 4.69
2849 4802 9.515020 AAATTGTAACATGAATTTAGCATACGG 57.485 29.630 0.00 0.00 31.48 4.02
2859 4812 9.522804 ACACGTAACAAAATTGTAACATGAATT 57.477 25.926 0.00 0.00 41.31 2.17
2860 4813 9.522804 AACACGTAACAAAATTGTAACATGAAT 57.477 25.926 0.00 0.00 41.31 2.57
2861 4814 8.912787 AACACGTAACAAAATTGTAACATGAA 57.087 26.923 0.00 0.00 41.31 2.57
2862 4815 8.799091 CAAACACGTAACAAAATTGTAACATGA 58.201 29.630 0.00 0.00 41.31 3.07
2863 4816 8.587950 ACAAACACGTAACAAAATTGTAACATG 58.412 29.630 0.00 0.00 41.31 3.21
2864 4817 8.587950 CACAAACACGTAACAAAATTGTAACAT 58.412 29.630 0.00 0.00 41.31 2.71
2865 4818 7.594015 ACACAAACACGTAACAAAATTGTAACA 59.406 29.630 0.00 0.00 41.31 2.41
2866 4819 7.888710 CACACAAACACGTAACAAAATTGTAAC 59.111 33.333 0.00 0.00 41.31 2.50
2867 4820 7.410513 GCACACAAACACGTAACAAAATTGTAA 60.411 33.333 0.00 0.00 41.31 2.41
2868 4821 6.033619 GCACACAAACACGTAACAAAATTGTA 59.966 34.615 0.00 0.00 41.31 2.41
2869 4822 5.164041 GCACACAAACACGTAACAAAATTGT 60.164 36.000 0.00 0.00 44.72 2.71
2870 4823 5.061560 AGCACACAAACACGTAACAAAATTG 59.938 36.000 0.00 0.00 0.00 2.32
2871 4824 5.164954 AGCACACAAACACGTAACAAAATT 58.835 33.333 0.00 0.00 0.00 1.82
2872 4825 4.739195 AGCACACAAACACGTAACAAAAT 58.261 34.783 0.00 0.00 0.00 1.82
2873 4826 4.162096 AGCACACAAACACGTAACAAAA 57.838 36.364 0.00 0.00 0.00 2.44
2912 4866 2.424956 CTGATCAAGCTGGGCCTTTAAC 59.575 50.000 4.53 0.00 0.00 2.01
2948 4902 6.586082 CCCTGGTATTTGAAACAAGATTTTCG 59.414 38.462 0.00 0.00 38.17 3.46
2993 4953 8.593492 AAATTTGTATTCAGGAAAAGAGCAAC 57.407 30.769 0.00 0.00 0.00 4.17
3023 5000 1.701847 GTGAGGCATATGGTCCCAGAT 59.298 52.381 4.56 0.00 0.00 2.90
3039 5018 0.739561 GGTAGTACTCGCCCTGTGAG 59.260 60.000 0.00 3.24 44.67 3.51
3201 5180 5.574055 CGAAACAGAACCAATGAATGAATGG 59.426 40.000 0.00 0.00 40.16 3.16
3211 5190 1.579429 GCGCCGAAACAGAACCAAT 59.421 52.632 0.00 0.00 0.00 3.16
3251 5334 7.340232 AGAAAAAGCAAGGCTAATCATCACATA 59.660 33.333 0.00 0.00 38.25 2.29
3259 5342 7.030165 GTCCTAAAGAAAAAGCAAGGCTAATC 58.970 38.462 0.00 0.00 38.25 1.75
3263 5346 3.574396 GGTCCTAAAGAAAAAGCAAGGCT 59.426 43.478 0.00 0.00 42.56 4.58
3334 5419 2.807967 CCATCTTCTCAAACGCTGACAA 59.192 45.455 0.00 0.00 0.00 3.18
3342 5427 4.940654 CCTTTCTCCTCCATCTTCTCAAAC 59.059 45.833 0.00 0.00 0.00 2.93
3460 5554 2.723322 TTTGAGCATGCATCTAGCCT 57.277 45.000 21.98 0.00 44.83 4.58
3464 5558 2.424601 GCACCTTTTGAGCATGCATCTA 59.575 45.455 21.98 8.66 36.30 1.98
3472 5566 3.578716 AGTACTCTAGCACCTTTTGAGCA 59.421 43.478 0.00 0.00 0.00 4.26
3482 5663 6.095720 AGGTTACTGAATGAGTACTCTAGCAC 59.904 42.308 23.01 14.29 36.86 4.40
3497 6107 8.153221 TCTAATGGGTCATTAAGGTTACTGAA 57.847 34.615 2.58 0.00 36.14 3.02
3518 6128 8.519799 ACAAATTTTGAGGTTCAAGTCTCTAA 57.480 30.769 15.81 0.00 37.70 2.10
3527 6137 8.690884 TGATAGTTTGACAAATTTTGAGGTTCA 58.309 29.630 15.81 6.16 0.00 3.18
3540 6150 8.978874 ATATTATGCCACTGATAGTTTGACAA 57.021 30.769 0.00 0.00 0.00 3.18
3568 6182 0.460987 AGTTGCTACCTGATGCGCTC 60.461 55.000 9.73 4.27 0.00 5.03
3570 6185 1.709147 CCAGTTGCTACCTGATGCGC 61.709 60.000 0.00 0.00 31.38 6.09
3571 6186 0.108186 TCCAGTTGCTACCTGATGCG 60.108 55.000 0.00 0.00 31.38 4.73
3613 6228 5.170748 GCAAATTTGACAACTTATGGAGGG 58.829 41.667 22.31 0.00 0.00 4.30
3630 6245 4.020396 TGTTGATACAATGGCTGGCAAATT 60.020 37.500 8.35 0.00 0.00 1.82
3642 6257 5.245751 TCCAGGTGCATTTTGTTGATACAAT 59.754 36.000 0.00 0.00 43.43 2.71
3651 6266 4.420522 AAAACATCCAGGTGCATTTTGT 57.579 36.364 0.00 0.00 0.00 2.83
3702 6318 9.979270 CTGCTTGAAAACTAGATACTTAATGTG 57.021 33.333 0.00 0.00 0.00 3.21
3709 6325 6.360370 TCCACTGCTTGAAAACTAGATACT 57.640 37.500 0.00 0.00 0.00 2.12
3710 6326 7.982354 ACTATCCACTGCTTGAAAACTAGATAC 59.018 37.037 0.00 0.00 0.00 2.24
3740 6356 4.890158 TGCTAGACTCTGTTGAAATGGA 57.110 40.909 0.00 0.00 0.00 3.41
3795 6439 7.497249 ACTCATAACAACTCAAATAGGAGATGC 59.503 37.037 0.00 0.00 40.25 3.91
3840 6492 6.485171 AGCAAGAGGATTAAAACATGGTAGT 58.515 36.000 0.00 0.00 0.00 2.73
3841 6493 7.094205 ACAAGCAAGAGGATTAAAACATGGTAG 60.094 37.037 0.00 0.00 0.00 3.18
3842 6494 6.719370 ACAAGCAAGAGGATTAAAACATGGTA 59.281 34.615 0.00 0.00 0.00 3.25
3843 6495 5.539955 ACAAGCAAGAGGATTAAAACATGGT 59.460 36.000 0.00 0.00 0.00 3.55
3844 6496 5.865552 CACAAGCAAGAGGATTAAAACATGG 59.134 40.000 0.00 0.00 0.00 3.66
3845 6497 6.449698 ACACAAGCAAGAGGATTAAAACATG 58.550 36.000 0.00 0.00 0.00 3.21
3846 6498 6.655078 ACACAAGCAAGAGGATTAAAACAT 57.345 33.333 0.00 0.00 0.00 2.71
3847 6499 6.770785 ACTACACAAGCAAGAGGATTAAAACA 59.229 34.615 0.00 0.00 0.00 2.83
3857 6509 5.679734 AACATTCACTACACAAGCAAGAG 57.320 39.130 0.00 0.00 0.00 2.85
3892 6544 2.097466 GCACATGTAATTTCCCGACCAG 59.903 50.000 0.00 0.00 0.00 4.00
3920 6572 6.299805 TGATAACACAGCCAGTAAGAGAAT 57.700 37.500 0.00 0.00 0.00 2.40
3997 6649 3.848019 CAGCACAAAACATGTAGCGATTC 59.152 43.478 0.00 0.00 41.46 2.52
4001 6653 2.032117 TGACAGCACAAAACATGTAGCG 60.032 45.455 0.00 0.00 41.46 4.26
4150 6802 3.078097 ACTGTGCACATAAAATACCGCA 58.922 40.909 22.00 0.00 0.00 5.69
4200 6858 4.870221 TCTCATTTGTGCAAGATCATCG 57.130 40.909 0.00 0.00 0.00 3.84
4239 6897 5.488645 AAACAACGAAACGTACCAAAGAT 57.511 34.783 0.00 0.00 39.99 2.40
4285 6946 9.713713 AGTAGACAGAATCTCCTTTTTAACTTC 57.286 33.333 0.00 0.00 39.04 3.01
4296 6957 7.821846 ACAGAATCAAAAGTAGACAGAATCTCC 59.178 37.037 0.00 0.00 39.04 3.71
4309 6970 3.399305 AGGAAGGGGACAGAATCAAAAGT 59.601 43.478 0.00 0.00 0.00 2.66
4318 6979 1.133809 CCCAACAGGAAGGGGACAGA 61.134 60.000 0.00 0.00 45.08 3.41
4319 6980 1.133809 TCCCAACAGGAAGGGGACAG 61.134 60.000 0.00 0.00 45.83 3.51
4375 7057 9.914131 GATTCCTTTTTGTATTTCAGTTAGCTT 57.086 29.630 0.00 0.00 0.00 3.74
4388 7070 9.793259 AACAGACATAGAAGATTCCTTTTTGTA 57.207 29.630 0.00 0.00 31.62 2.41
4389 7071 8.697507 AACAGACATAGAAGATTCCTTTTTGT 57.302 30.769 0.00 0.00 31.62 2.83
4390 7072 9.971922 AAAACAGACATAGAAGATTCCTTTTTG 57.028 29.630 0.00 0.00 31.62 2.44
4397 7079 9.780413 GGAATGAAAAACAGACATAGAAGATTC 57.220 33.333 0.00 0.00 0.00 2.52
4398 7080 8.454106 CGGAATGAAAAACAGACATAGAAGATT 58.546 33.333 0.00 0.00 0.00 2.40
4400 7082 6.934645 ACGGAATGAAAAACAGACATAGAAGA 59.065 34.615 0.00 0.00 0.00 2.87
4401 7083 7.133891 ACGGAATGAAAAACAGACATAGAAG 57.866 36.000 0.00 0.00 0.00 2.85
4402 7084 6.148811 GGACGGAATGAAAAACAGACATAGAA 59.851 38.462 0.00 0.00 0.00 2.10
4404 7086 5.411361 TGGACGGAATGAAAAACAGACATAG 59.589 40.000 0.00 0.00 0.00 2.23
4405 7087 5.309638 TGGACGGAATGAAAAACAGACATA 58.690 37.500 0.00 0.00 0.00 2.29
4406 7088 4.141287 TGGACGGAATGAAAAACAGACAT 58.859 39.130 0.00 0.00 0.00 3.06
4407 7089 3.546724 TGGACGGAATGAAAAACAGACA 58.453 40.909 0.00 0.00 0.00 3.41
4408 7090 4.766404 ATGGACGGAATGAAAAACAGAC 57.234 40.909 0.00 0.00 0.00 3.51
4409 7091 4.217550 GGAATGGACGGAATGAAAAACAGA 59.782 41.667 0.00 0.00 0.00 3.41
4411 7093 3.891977 TGGAATGGACGGAATGAAAAACA 59.108 39.130 0.00 0.00 0.00 2.83
4412 7094 4.513198 TGGAATGGACGGAATGAAAAAC 57.487 40.909 0.00 0.00 0.00 2.43
4416 7098 3.820467 GCATATGGAATGGACGGAATGAA 59.180 43.478 4.56 0.00 0.00 2.57
4418 7100 3.148412 TGCATATGGAATGGACGGAATG 58.852 45.455 4.56 0.00 0.00 2.67
4427 7109 9.223099 TGAAACTATAGTCATGCATATGGAATG 57.777 33.333 5.70 0.96 34.97 2.67
4428 7110 9.970553 ATGAAACTATAGTCATGCATATGGAAT 57.029 29.630 5.70 0.00 33.21 3.01
4456 7145 1.227527 CGCCCTTCTGTGTGTGTGA 60.228 57.895 0.00 0.00 0.00 3.58
4459 7148 0.532862 AGTTCGCCCTTCTGTGTGTG 60.533 55.000 0.00 0.00 0.00 3.82
4463 7152 1.376037 GGGAGTTCGCCCTTCTGTG 60.376 63.158 4.39 0.00 45.12 3.66
4464 7153 3.069778 GGGAGTTCGCCCTTCTGT 58.930 61.111 4.39 0.00 45.12 3.41
4492 7181 3.695022 CTGATTTGCTGGCTGCGGC 62.695 63.158 9.72 9.72 46.63 6.53
4495 7184 0.737219 CTACCTGATTTGCTGGCTGC 59.263 55.000 9.67 9.67 39.08 5.25
4512 7201 0.970937 CTGTGTCTCGGAAGGGGCTA 60.971 60.000 0.00 0.00 36.88 3.93
4518 7207 3.441922 TCTCAATCTCTGTGTCTCGGAAG 59.558 47.826 0.00 0.00 0.00 3.46
4522 7211 3.441922 TCCTTCTCAATCTCTGTGTCTCG 59.558 47.826 0.00 0.00 0.00 4.04
4530 7219 6.805016 TCATTTAGCTCCTTCTCAATCTCT 57.195 37.500 0.00 0.00 0.00 3.10
4550 7239 1.451028 GCCTTCTTCCGCAGCTCAT 60.451 57.895 0.00 0.00 0.00 2.90
4609 7301 1.000896 AGGTTTCATCAAGCCCCGG 60.001 57.895 0.00 0.00 33.29 5.73
4611 7303 0.332972 AGGAGGTTTCATCAAGCCCC 59.667 55.000 0.00 0.00 33.29 5.80
4612 7304 2.644676 GTAGGAGGTTTCATCAAGCCC 58.355 52.381 0.00 0.00 33.29 5.19
4632 7324 0.400594 AACTTCTGGGGTTCTTCGGG 59.599 55.000 0.00 0.00 0.00 5.14
4708 7410 3.057586 CACCCATATACCTTTACCCCCA 58.942 50.000 0.00 0.00 0.00 4.96
4709 7411 2.224942 GCACCCATATACCTTTACCCCC 60.225 54.545 0.00 0.00 0.00 5.40
4710 7412 2.551504 CGCACCCATATACCTTTACCCC 60.552 54.545 0.00 0.00 0.00 4.95
4711 7413 2.105306 ACGCACCCATATACCTTTACCC 59.895 50.000 0.00 0.00 0.00 3.69
4747 7451 8.514594 AGTACAATGACATACACAGGAAAATTG 58.485 33.333 0.00 0.00 0.00 2.32
4748 7452 8.635765 AGTACAATGACATACACAGGAAAATT 57.364 30.769 0.00 0.00 0.00 1.82
4810 7517 2.290705 GCTAAGCTCAAAAGGGGGTGTA 60.291 50.000 0.00 0.00 0.00 2.90
4817 7524 2.163211 GCTCTTGGCTAAGCTCAAAAGG 59.837 50.000 4.68 0.00 38.06 3.11
4846 7553 3.390521 AAGCGCACGAGGATGGGA 61.391 61.111 11.47 0.00 34.56 4.37
4862 7569 1.511850 CCAGCATCGACAACAGTCAA 58.488 50.000 0.00 0.00 32.50 3.18
4870 7577 1.750193 GGAAAATCCCAGCATCGACA 58.250 50.000 0.00 0.00 0.00 4.35
4883 7590 4.045334 TCCTAAACAGACCCATGGGAAAAT 59.955 41.667 38.07 15.47 38.96 1.82
4884 7591 3.399644 TCCTAAACAGACCCATGGGAAAA 59.600 43.478 38.07 13.26 38.96 2.29
4891 7598 3.846588 AGATGTGTCCTAAACAGACCCAT 59.153 43.478 0.00 0.00 38.97 4.00
4892 7599 3.248024 AGATGTGTCCTAAACAGACCCA 58.752 45.455 0.00 0.00 38.97 4.51
4893 7600 3.983044 AGATGTGTCCTAAACAGACCC 57.017 47.619 0.00 0.00 38.97 4.46
4894 7601 5.916661 TCTAGATGTGTCCTAAACAGACC 57.083 43.478 0.00 0.00 38.97 3.85
4936 7643 7.093552 ACAAACAGAGTAGACATCAGCTTAGAT 60.094 37.037 0.00 0.00 0.00 1.98
4937 7644 6.209589 ACAAACAGAGTAGACATCAGCTTAGA 59.790 38.462 0.00 0.00 0.00 2.10
4938 7645 6.309980 CACAAACAGAGTAGACATCAGCTTAG 59.690 42.308 0.00 0.00 0.00 2.18
4939 7646 6.159293 CACAAACAGAGTAGACATCAGCTTA 58.841 40.000 0.00 0.00 0.00 3.09
4940 7647 4.993584 CACAAACAGAGTAGACATCAGCTT 59.006 41.667 0.00 0.00 0.00 3.74
4941 7648 4.562347 CCACAAACAGAGTAGACATCAGCT 60.562 45.833 0.00 0.00 0.00 4.24
4942 7649 3.681897 CCACAAACAGAGTAGACATCAGC 59.318 47.826 0.00 0.00 0.00 4.26
4943 7650 4.887748 ACCACAAACAGAGTAGACATCAG 58.112 43.478 0.00 0.00 0.00 2.90
4944 7651 4.588951 AGACCACAAACAGAGTAGACATCA 59.411 41.667 0.00 0.00 0.00 3.07
4945 7652 5.140747 AGACCACAAACAGAGTAGACATC 57.859 43.478 0.00 0.00 0.00 3.06
4946 7653 6.859112 ATAGACCACAAACAGAGTAGACAT 57.141 37.500 0.00 0.00 0.00 3.06
4947 7654 6.665992 AATAGACCACAAACAGAGTAGACA 57.334 37.500 0.00 0.00 0.00 3.41
4948 7655 7.964604 AAAATAGACCACAAACAGAGTAGAC 57.035 36.000 0.00 0.00 0.00 2.59
4987 7694 5.876612 AATGCAGCAACAAGAAACAAAAA 57.123 30.435 0.00 0.00 0.00 1.94
4988 7695 8.830201 ATATAATGCAGCAACAAGAAACAAAA 57.170 26.923 0.00 0.00 0.00 2.44
4991 7698 9.518906 CAATATATAATGCAGCAACAAGAAACA 57.481 29.630 0.00 0.00 0.00 2.83
4992 7699 8.971321 CCAATATATAATGCAGCAACAAGAAAC 58.029 33.333 0.00 0.00 0.00 2.78
4993 7700 8.694540 ACCAATATATAATGCAGCAACAAGAAA 58.305 29.630 0.00 0.00 0.00 2.52
4994 7701 8.136800 CACCAATATATAATGCAGCAACAAGAA 58.863 33.333 0.00 0.00 0.00 2.52
4995 7702 7.255555 CCACCAATATATAATGCAGCAACAAGA 60.256 37.037 0.00 0.00 0.00 3.02
4996 7703 6.864685 CCACCAATATATAATGCAGCAACAAG 59.135 38.462 0.00 0.00 0.00 3.16
4997 7704 6.239261 CCCACCAATATATAATGCAGCAACAA 60.239 38.462 0.00 0.00 0.00 2.83
4998 7705 5.243507 CCCACCAATATATAATGCAGCAACA 59.756 40.000 0.00 0.00 0.00 3.33
4999 7706 5.476599 TCCCACCAATATATAATGCAGCAAC 59.523 40.000 0.00 0.00 0.00 4.17
5000 7707 5.639139 TCCCACCAATATATAATGCAGCAA 58.361 37.500 0.00 0.00 0.00 3.91
5001 7708 5.253991 TCCCACCAATATATAATGCAGCA 57.746 39.130 0.00 0.00 0.00 4.41
5002 7709 4.096984 GCTCCCACCAATATATAATGCAGC 59.903 45.833 0.00 0.00 0.00 5.25
5003 7710 5.503927 AGCTCCCACCAATATATAATGCAG 58.496 41.667 0.00 0.00 0.00 4.41
5004 7711 5.519183 AGCTCCCACCAATATATAATGCA 57.481 39.130 0.00 0.00 0.00 3.96
5005 7712 7.338710 TCTAAGCTCCCACCAATATATAATGC 58.661 38.462 0.00 0.00 0.00 3.56
5006 7713 9.334947 CATCTAAGCTCCCACCAATATATAATG 57.665 37.037 0.00 0.00 0.00 1.90
5007 7714 9.062367 ACATCTAAGCTCCCACCAATATATAAT 57.938 33.333 0.00 0.00 0.00 1.28
5008 7715 8.321353 CACATCTAAGCTCCCACCAATATATAA 58.679 37.037 0.00 0.00 0.00 0.98
5009 7716 7.678171 TCACATCTAAGCTCCCACCAATATATA 59.322 37.037 0.00 0.00 0.00 0.86
5010 7717 6.501805 TCACATCTAAGCTCCCACCAATATAT 59.498 38.462 0.00 0.00 0.00 0.86
5011 7718 5.843969 TCACATCTAAGCTCCCACCAATATA 59.156 40.000 0.00 0.00 0.00 0.86
5012 7719 4.660303 TCACATCTAAGCTCCCACCAATAT 59.340 41.667 0.00 0.00 0.00 1.28
5013 7720 4.037222 TCACATCTAAGCTCCCACCAATA 58.963 43.478 0.00 0.00 0.00 1.90
5014 7721 2.846206 TCACATCTAAGCTCCCACCAAT 59.154 45.455 0.00 0.00 0.00 3.16
5015 7722 2.265367 TCACATCTAAGCTCCCACCAA 58.735 47.619 0.00 0.00 0.00 3.67
5016 7723 1.951209 TCACATCTAAGCTCCCACCA 58.049 50.000 0.00 0.00 0.00 4.17
5017 7724 4.323104 GGATATCACATCTAAGCTCCCACC 60.323 50.000 4.83 0.00 0.00 4.61
5018 7725 4.530161 AGGATATCACATCTAAGCTCCCAC 59.470 45.833 4.83 0.00 0.00 4.61
5019 7726 4.756564 AGGATATCACATCTAAGCTCCCA 58.243 43.478 4.83 0.00 0.00 4.37
5020 7727 5.753721 AAGGATATCACATCTAAGCTCCC 57.246 43.478 4.83 0.00 0.00 4.30
5021 7728 7.177568 TCTGTAAGGATATCACATCTAAGCTCC 59.822 40.741 4.83 0.00 0.00 4.70
5022 7729 8.116651 TCTGTAAGGATATCACATCTAAGCTC 57.883 38.462 4.83 0.00 0.00 4.09
5023 7730 8.364142 GTTCTGTAAGGATATCACATCTAAGCT 58.636 37.037 4.83 0.00 0.00 3.74
5024 7731 8.144478 TGTTCTGTAAGGATATCACATCTAAGC 58.856 37.037 4.83 0.00 0.00 3.09
5027 7734 9.593565 AGATGTTCTGTAAGGATATCACATCTA 57.406 33.333 20.83 0.77 44.89 1.98
5028 7735 8.489676 AGATGTTCTGTAAGGATATCACATCT 57.510 34.615 18.35 18.35 42.98 2.90
5029 7736 9.853555 CTAGATGTTCTGTAAGGATATCACATC 57.146 37.037 15.55 15.55 39.62 3.06
5030 7737 9.593565 TCTAGATGTTCTGTAAGGATATCACAT 57.406 33.333 4.83 3.08 0.00 3.21
5031 7738 8.996651 TCTAGATGTTCTGTAAGGATATCACA 57.003 34.615 4.83 0.00 0.00 3.58
5032 7739 9.853555 CATCTAGATGTTCTGTAAGGATATCAC 57.146 37.037 22.42 0.00 34.23 3.06
5049 7756 9.376075 ACAGTTTGTCTAATTCACATCTAGATG 57.624 33.333 27.63 27.63 44.15 2.90
5050 7757 9.950496 AACAGTTTGTCTAATTCACATCTAGAT 57.050 29.630 0.00 0.00 0.00 1.98
5051 7758 9.778741 AAACAGTTTGTCTAATTCACATCTAGA 57.221 29.630 0.00 0.00 0.00 2.43
5053 7760 8.999431 GGAAACAGTTTGTCTAATTCACATCTA 58.001 33.333 2.34 0.00 0.00 1.98
5054 7761 7.040409 GGGAAACAGTTTGTCTAATTCACATCT 60.040 37.037 2.34 0.00 0.00 2.90
5055 7762 7.084486 GGGAAACAGTTTGTCTAATTCACATC 58.916 38.462 2.34 0.00 0.00 3.06
5056 7763 6.549364 TGGGAAACAGTTTGTCTAATTCACAT 59.451 34.615 2.34 0.00 32.29 3.21
5057 7764 5.888724 TGGGAAACAGTTTGTCTAATTCACA 59.111 36.000 2.34 0.00 33.74 3.58
5058 7765 6.385649 TGGGAAACAGTTTGTCTAATTCAC 57.614 37.500 2.34 0.00 0.00 3.18
5059 7766 7.432869 CAATGGGAAACAGTTTGTCTAATTCA 58.567 34.615 2.34 0.00 0.00 2.57
5060 7767 6.366061 GCAATGGGAAACAGTTTGTCTAATTC 59.634 38.462 2.34 0.00 0.00 2.17
5061 7768 6.041979 AGCAATGGGAAACAGTTTGTCTAATT 59.958 34.615 2.34 0.00 0.00 1.40
5062 7769 5.539955 AGCAATGGGAAACAGTTTGTCTAAT 59.460 36.000 2.34 0.00 0.00 1.73
5063 7770 4.892934 AGCAATGGGAAACAGTTTGTCTAA 59.107 37.500 2.34 0.00 0.00 2.10
5064 7771 4.278170 CAGCAATGGGAAACAGTTTGTCTA 59.722 41.667 2.34 0.00 0.00 2.59
5065 7772 3.068590 CAGCAATGGGAAACAGTTTGTCT 59.931 43.478 2.34 0.00 0.00 3.41
5066 7773 3.383761 CAGCAATGGGAAACAGTTTGTC 58.616 45.455 2.34 0.00 0.00 3.18
5067 7774 2.483538 GCAGCAATGGGAAACAGTTTGT 60.484 45.455 2.34 0.00 0.00 2.83
5068 7775 2.137523 GCAGCAATGGGAAACAGTTTG 58.862 47.619 2.34 0.00 0.00 2.93
5069 7776 1.070601 GGCAGCAATGGGAAACAGTTT 59.929 47.619 0.00 0.00 0.00 2.66
5070 7777 0.681175 GGCAGCAATGGGAAACAGTT 59.319 50.000 0.00 0.00 0.00 3.16
5071 7778 1.187567 GGGCAGCAATGGGAAACAGT 61.188 55.000 0.00 0.00 0.00 3.55
5072 7779 1.186917 TGGGCAGCAATGGGAAACAG 61.187 55.000 0.00 0.00 0.00 3.16
5073 7780 0.544833 ATGGGCAGCAATGGGAAACA 60.545 50.000 0.00 0.00 0.00 2.83
5074 7781 0.614812 AATGGGCAGCAATGGGAAAC 59.385 50.000 0.00 0.00 0.00 2.78
5075 7782 0.903942 GAATGGGCAGCAATGGGAAA 59.096 50.000 0.00 0.00 0.00 3.13
5076 7783 0.041535 AGAATGGGCAGCAATGGGAA 59.958 50.000 0.00 0.00 0.00 3.97
5077 7784 0.041535 AAGAATGGGCAGCAATGGGA 59.958 50.000 0.00 0.00 0.00 4.37
5078 7785 0.906775 AAAGAATGGGCAGCAATGGG 59.093 50.000 0.00 0.00 0.00 4.00
5079 7786 1.829222 AGAAAGAATGGGCAGCAATGG 59.171 47.619 0.00 0.00 0.00 3.16
5080 7787 4.159135 AGTTAGAAAGAATGGGCAGCAATG 59.841 41.667 0.00 0.00 0.00 2.82
5081 7788 4.159135 CAGTTAGAAAGAATGGGCAGCAAT 59.841 41.667 0.00 0.00 0.00 3.56
5158 7865 2.403586 GTACAGAATTGCGGCCGC 59.596 61.111 42.35 42.35 42.35 6.53
5167 7875 0.108138 GCTCCGTGCAGGTACAGAAT 60.108 55.000 5.57 0.00 42.31 2.40
5173 7881 2.037367 AGAGGCTCCGTGCAGGTA 59.963 61.111 11.71 0.00 45.15 3.08
5197 7937 3.328050 ACTTAACAGCTAGGCAGAAACCT 59.672 43.478 0.00 0.00 44.31 3.50
5250 7990 3.257624 GGACGGATAAACGGATACATCCT 59.742 47.826 6.68 0.00 44.93 3.24
5254 7994 2.101249 GTGGGACGGATAAACGGATACA 59.899 50.000 0.00 0.00 38.39 2.29
5255 7995 2.363359 AGTGGGACGGATAAACGGATAC 59.637 50.000 0.00 0.00 38.39 2.24
5323 8064 2.552155 CCTTCATCTGAACCCGGTTTGA 60.552 50.000 3.77 6.82 0.00 2.69
5552 8526 0.177373 GGGTTACGACTGATGTCCCC 59.823 60.000 0.00 0.00 39.94 4.81
5553 8527 0.177373 GGGGTTACGACTGATGTCCC 59.823 60.000 0.00 0.00 39.94 4.46
5554 8528 1.136500 GAGGGGTTACGACTGATGTCC 59.864 57.143 0.00 0.00 39.94 4.02
5555 8529 2.099427 GAGAGGGGTTACGACTGATGTC 59.901 54.545 0.00 0.00 39.70 3.06
5556 8530 2.100989 GAGAGGGGTTACGACTGATGT 58.899 52.381 0.00 0.00 0.00 3.06
5557 8531 2.359531 GAGAGAGGGGTTACGACTGATG 59.640 54.545 0.00 0.00 0.00 3.07
5558 8532 2.657143 GAGAGAGGGGTTACGACTGAT 58.343 52.381 0.00 0.00 0.00 2.90
5559 8533 1.340795 GGAGAGAGGGGTTACGACTGA 60.341 57.143 0.00 0.00 0.00 3.41
5560 8534 1.104630 GGAGAGAGGGGTTACGACTG 58.895 60.000 0.00 0.00 0.00 3.51
5561 8535 1.001282 AGGAGAGAGGGGTTACGACT 58.999 55.000 0.00 0.00 0.00 4.18
5562 8536 1.104630 CAGGAGAGAGGGGTTACGAC 58.895 60.000 0.00 0.00 0.00 4.34
5563 8537 3.590643 CAGGAGAGAGGGGTTACGA 57.409 57.895 0.00 0.00 0.00 3.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.