Multiple sequence alignment - TraesCS3D01G399100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G399100 chr3D 100.000 6355 0 0 1 6355 513954248 513947894 0.000000e+00 11736.0
1 TraesCS3D01G399100 chr3B 93.066 5408 201 70 678 6030 676276146 676270858 0.000000e+00 7749.0
2 TraesCS3D01G399100 chr3B 88.088 680 71 7 17 693 676276830 676276158 0.000000e+00 798.0
3 TraesCS3D01G399100 chr3B 97.500 40 1 0 5912 5951 676271015 676270976 1.140000e-07 69.4
4 TraesCS3D01G399100 chr3A 95.415 2312 82 10 2893 5189 648870447 648868145 0.000000e+00 3661.0
5 TraesCS3D01G399100 chr3A 91.553 1977 85 41 687 2624 648872702 648870769 0.000000e+00 2651.0
6 TraesCS3D01G399100 chr3A 90.819 904 29 18 5143 6033 648868150 648867288 0.000000e+00 1160.0
7 TraesCS3D01G399100 chr3A 84.077 986 111 24 18 985 648874465 648873508 0.000000e+00 909.0
8 TraesCS3D01G399100 chr3A 95.851 241 9 1 2654 2894 648870768 648870529 7.730000e-104 388.0
9 TraesCS3D01G399100 chr2D 98.160 326 6 0 6030 6355 338471813 338472138 2.570000e-158 569.0
10 TraesCS3D01G399100 chr4D 97.554 327 8 0 6029 6355 131068594 131068268 1.550000e-155 560.0
11 TraesCS3D01G399100 chr2B 96.341 328 12 0 6025 6352 220928679 220929006 2.020000e-149 540.0
12 TraesCS3D01G399100 chr2B 95.719 327 13 1 6029 6355 694742080 694741755 5.640000e-145 525.0
13 TraesCS3D01G399100 chr2B 95.719 327 13 1 6029 6355 694770793 694770468 5.640000e-145 525.0
14 TraesCS3D01G399100 chr2A 95.385 325 13 1 6030 6352 45293814 45294138 3.400000e-142 516.0
15 TraesCS3D01G399100 chr5B 94.172 326 17 1 6029 6352 512954502 512954827 4.430000e-136 496.0
16 TraesCS3D01G399100 chr7B 95.710 303 11 1 6052 6352 122635494 122635796 2.660000e-133 486.0
17 TraesCS3D01G399100 chr7B 83.838 99 14 2 2507 2604 668204570 668204667 6.780000e-15 93.5
18 TraesCS3D01G399100 chr1A 92.424 330 20 3 6030 6355 46373997 46373669 3.470000e-127 466.0
19 TraesCS3D01G399100 chr1A 87.255 102 13 0 2504 2605 343421443 343421544 4.030000e-22 117.0
20 TraesCS3D01G399100 chr1A 84.762 105 12 3 2500 2603 557945849 557945950 1.130000e-17 102.0
21 TraesCS3D01G399100 chr1B 89.216 102 11 0 2504 2605 354987431 354987532 1.860000e-25 128.0
22 TraesCS3D01G399100 chr1B 83.810 105 17 0 2499 2603 254461188 254461084 4.050000e-17 100.0
23 TraesCS3D01G399100 chr1D 89.899 99 9 1 2507 2605 258092058 258091961 6.690000e-25 126.0
24 TraesCS3D01G399100 chr1D 89.041 73 8 0 2500 2572 123701637 123701709 2.440000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G399100 chr3D 513947894 513954248 6354 True 11736.0 11736 100.000 1 6355 1 chr3D.!!$R1 6354
1 TraesCS3D01G399100 chr3B 676270858 676276146 5288 True 7749.0 7749 93.066 678 6030 1 chr3B.!!$R1 5352
2 TraesCS3D01G399100 chr3B 676276158 676276830 672 True 798.0 798 88.088 17 693 1 chr3B.!!$R3 676
3 TraesCS3D01G399100 chr3A 648867288 648874465 7177 True 1753.8 3661 91.543 18 6033 5 chr3A.!!$R1 6015

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
655 663 0.603065 GGATGCCACAAACAACCCTC 59.397 55.000 0.00 0.00 0.00 4.30 F
1402 2518 1.291906 CCGTTTGGGTGGAATTGCC 59.708 57.895 0.00 0.00 37.10 4.52 F
2328 3464 0.396060 TTTTTGGTGGAGCAATGGGC 59.604 50.000 0.00 0.00 45.30 5.36 F
3351 4579 0.875040 TTTGCGCAAGTGGCACATTG 60.875 50.000 23.68 19.97 44.52 2.82 F
4262 5500 0.038159 AAGGAAACTCGCAGGAGACG 60.038 55.000 0.00 0.00 43.27 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1491 2607 1.001860 CGCCCAAAATCCACAACCAAT 59.998 47.619 0.00 0.0 0.00 3.16 R
2917 4137 0.240945 GCACACGGGACCAAGAAATG 59.759 55.000 0.00 0.0 0.00 2.32 R
3668 4899 0.886490 CACAACAGACCTCACCTGGC 60.886 60.000 0.00 0.0 36.03 4.85 R
4606 5849 1.741706 AGAATGTCATCTGGCTTTGCG 59.258 47.619 0.00 0.0 0.00 4.85 R
5991 7344 0.041684 AGGATCCAGCCAAAAAGGGG 59.958 55.000 15.82 0.0 38.09 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
102 103 2.430465 GTGTCACACTAGACGACCCTA 58.570 52.381 0.00 0.00 41.41 3.53
186 190 4.047822 ACAAACAACCATTGCGTGTATTG 58.952 39.130 0.00 0.00 31.50 1.90
189 193 2.881513 ACAACCATTGCGTGTATTGTCA 59.118 40.909 4.13 0.00 32.67 3.58
192 196 2.423185 ACCATTGCGTGTATTGTCATGG 59.577 45.455 0.00 0.00 0.00 3.66
282 286 5.915758 CGATAATCTCTCCCTCGTAAACTTG 59.084 44.000 0.00 0.00 0.00 3.16
297 301 8.046294 TCGTAAACTTGCAATACCAACATATT 57.954 30.769 0.00 0.00 0.00 1.28
324 328 3.314307 AGATAGAACACCATCCCGAGA 57.686 47.619 0.00 0.00 0.00 4.04
326 330 4.030913 AGATAGAACACCATCCCGAGAAA 58.969 43.478 0.00 0.00 0.00 2.52
328 332 1.076332 GAACACCATCCCGAGAAACG 58.924 55.000 0.00 0.00 42.18 3.60
376 382 4.913335 TTCAACTTCTCGTGTCTGTAGT 57.087 40.909 0.00 0.00 0.00 2.73
384 390 3.568430 TCTCGTGTCTGTAGTGTTCACAT 59.432 43.478 5.74 0.00 0.00 3.21
390 396 5.006358 GTGTCTGTAGTGTTCACATTTTCGT 59.994 40.000 5.74 0.00 0.00 3.85
391 397 5.006261 TGTCTGTAGTGTTCACATTTTCGTG 59.994 40.000 5.74 0.00 38.29 4.35
392 398 5.006358 GTCTGTAGTGTTCACATTTTCGTGT 59.994 40.000 5.74 0.00 38.12 4.49
393 399 5.233476 TCTGTAGTGTTCACATTTTCGTGTC 59.767 40.000 5.74 0.00 38.12 3.67
394 400 4.870991 TGTAGTGTTCACATTTTCGTGTCA 59.129 37.500 5.74 0.00 38.12 3.58
395 401 5.525745 TGTAGTGTTCACATTTTCGTGTCAT 59.474 36.000 5.74 0.00 38.12 3.06
403 410 9.297586 GTTCACATTTTCGTGTCATACTAGATA 57.702 33.333 0.00 0.00 38.12 1.98
413 420 6.450545 GTGTCATACTAGATAAGCATGCTGA 58.549 40.000 23.48 15.66 30.07 4.26
415 422 5.570973 GTCATACTAGATAAGCATGCTGACG 59.429 44.000 23.48 9.34 30.07 4.35
425 432 2.119671 CATGCTGACGTGCGTAGATA 57.880 50.000 0.00 0.00 35.36 1.98
429 436 1.709203 GCTGACGTGCGTAGATAATCG 59.291 52.381 0.00 0.00 0.00 3.34
444 451 6.937436 AGATAATCGCTTTCCCGTAAATTT 57.063 33.333 0.00 0.00 0.00 1.82
471 478 2.431771 CACCGACGCGTGGATTCA 60.432 61.111 27.07 0.00 0.00 2.57
487 494 5.411669 GTGGATTCAAGTAACAACCTACCAG 59.588 44.000 0.00 0.00 0.00 4.00
491 498 3.329520 TCAAGTAACAACCTACCAGCCAT 59.670 43.478 0.00 0.00 0.00 4.40
503 510 9.295825 CAACCTACCAGCCATAAATATTCATTA 57.704 33.333 0.00 0.00 0.00 1.90
546 553 4.150451 TCAATCGCTGATACATATGTTGCG 59.850 41.667 25.15 25.15 42.70 4.85
547 554 3.092334 TCGCTGATACATATGTTGCGT 57.908 42.857 27.40 11.48 42.11 5.24
558 565 2.352503 ATGTTGCGTTTCATGCTTCC 57.647 45.000 0.00 0.00 0.00 3.46
565 573 2.351641 GCGTTTCATGCTTCCAATGACA 60.352 45.455 0.00 0.00 0.00 3.58
596 604 3.804329 ACGCCGGTATGCCCCAAT 61.804 61.111 1.90 0.00 0.00 3.16
603 611 2.586425 CGGTATGCCCCAATCATCTTT 58.414 47.619 0.00 0.00 0.00 2.52
655 663 0.603065 GGATGCCACAAACAACCCTC 59.397 55.000 0.00 0.00 0.00 4.30
659 667 1.901464 CCACAAACAACCCTCCCCG 60.901 63.158 0.00 0.00 0.00 5.73
660 668 2.203437 ACAAACAACCCTCCCCGC 60.203 61.111 0.00 0.00 0.00 6.13
719 1816 2.048503 GCCCGTAGCAGTTCGTGT 60.049 61.111 0.00 0.00 42.97 4.49
751 1848 3.980989 CGGACCACCACGTTCCGA 61.981 66.667 18.51 0.00 45.77 4.55
961 2059 3.316573 CTCTCCAACCACTCCGCCC 62.317 68.421 0.00 0.00 0.00 6.13
1390 2506 3.423154 GCCGAGGTGAGCCGTTTG 61.423 66.667 0.00 0.00 40.50 2.93
1402 2518 1.291906 CCGTTTGGGTGGAATTGCC 59.708 57.895 0.00 0.00 37.10 4.52
1515 2631 2.606108 GTTGTGGATTTTGGGCGATTC 58.394 47.619 0.00 0.00 0.00 2.52
1609 2726 1.028130 TCTCAGGATGCACGCTCTAG 58.972 55.000 0.00 0.00 34.76 2.43
1613 2730 0.461961 AGGATGCACGCTCTAGTTCC 59.538 55.000 0.00 0.00 0.00 3.62
1630 2747 2.283529 CCGCCCAGGAGTGTACTGT 61.284 63.158 0.00 0.00 45.00 3.55
1633 2750 0.977395 GCCCAGGAGTGTACTGTCTT 59.023 55.000 0.00 0.00 34.16 3.01
1649 2766 4.265904 TGTCTTGATACTTTCGAGGCAA 57.734 40.909 0.00 0.00 45.54 4.52
1655 2772 8.398665 GTCTTGATACTTTCGAGGCAATTTTAT 58.601 33.333 0.00 0.00 39.85 1.40
1747 2865 8.107399 AGTACAAAGTTATTTTAGTCCAAGGC 57.893 34.615 0.00 0.00 0.00 4.35
1768 2886 3.850374 GCAGTATTGTTTTCGCCGTCAAA 60.850 43.478 0.00 0.00 0.00 2.69
1840 2958 5.560724 ACTACACATGCCAGATTAAGTTGT 58.439 37.500 0.00 0.00 0.00 3.32
1883 3001 9.788960 CTTTTTAGAATTATTACCTGTGGAAGC 57.211 33.333 0.00 0.00 0.00 3.86
2144 3280 2.417243 GCTGCAGGAAATAATGGCGTTT 60.417 45.455 17.12 0.00 0.00 3.60
2328 3464 0.396060 TTTTTGGTGGAGCAATGGGC 59.604 50.000 0.00 0.00 45.30 5.36
2406 3543 1.321474 CGGGTGCCATTGCTATCAAT 58.679 50.000 0.00 0.00 43.31 2.57
2489 3627 7.161773 TCCTTTCTGCTGATTCATTTTAAGG 57.838 36.000 9.12 9.12 0.00 2.69
2514 3652 7.922811 GGCAAATCAGAAATTTATTACTCCCTG 59.077 37.037 0.00 0.00 0.00 4.45
2515 3653 8.470002 GCAAATCAGAAATTTATTACTCCCTGT 58.530 33.333 0.00 0.00 0.00 4.00
2539 3677 5.238432 TGATCCATATTAATTGACGCACACC 59.762 40.000 0.00 0.00 0.00 4.16
2577 3715 4.863131 ACTGAAGTTGTACTAAGTATGCGC 59.137 41.667 0.00 0.00 0.00 6.09
2588 3726 8.126074 TGTACTAAGTATGCGCCAATTAATTTG 58.874 33.333 4.18 0.00 34.93 2.32
2652 3790 7.792364 TGAACCTGAAGTCTTATCCTTCTAA 57.208 36.000 0.00 0.00 39.24 2.10
2685 3823 7.015974 TGGTCATCTGATAGCAATATCTTCTGT 59.984 37.037 0.00 0.00 0.00 3.41
2707 3845 6.179756 TGTTTGGCTGATATGCTCTTCTTTA 58.820 36.000 0.00 0.00 0.00 1.85
2719 3857 7.608308 ATGCTCTTCTTTACTTCTTGTCATC 57.392 36.000 0.00 0.00 0.00 2.92
2729 3867 9.823098 CTTTACTTCTTGTCATCAGAAATCAAG 57.177 33.333 0.00 0.00 37.44 3.02
2733 3871 5.065235 TCTTGTCATCAGAAATCAAGCACA 58.935 37.500 0.00 0.00 36.47 4.57
2824 3962 2.016165 GCTTTTTGCGCGACAAGGG 61.016 57.895 21.90 8.68 40.06 3.95
2917 4137 9.543783 CTAGTTATCCACTGTACTTTATTTCCC 57.456 37.037 0.00 0.00 35.97 3.97
2931 4151 1.917872 TTTCCCATTTCTTGGTCCCG 58.082 50.000 0.00 0.00 44.83 5.14
2955 4175 2.820197 TGCACGACTAACTGAGACTGAT 59.180 45.455 0.00 0.00 0.00 2.90
3351 4579 0.875040 TTTGCGCAAGTGGCACATTG 60.875 50.000 23.68 19.97 44.52 2.82
3385 4613 4.623932 ACTGAGTTGGCTGATTTACTCA 57.376 40.909 0.00 0.00 43.30 3.41
3477 4705 9.709495 TTTAGCAGCAATTCTGACATTATTTTT 57.291 25.926 0.00 0.00 45.72 1.94
3658 4889 5.468072 CCTCTGCAAGTCATATGTTGATACC 59.532 44.000 9.60 0.00 36.54 2.73
3668 4899 7.492669 AGTCATATGTTGATACCGAGTTTCTTG 59.507 37.037 1.90 0.00 36.54 3.02
3755 4986 8.712285 TCCTTTATTAAGACAGGTAAATCACG 57.288 34.615 2.37 0.00 32.92 4.35
3815 5046 9.483062 TTTGAATTGTTTTAGAAAATGCAAACG 57.517 25.926 0.00 0.00 35.07 3.60
3984 5222 5.047731 AGGCTTTAGAAAAGATTTGACAGGC 60.048 40.000 3.63 0.00 0.00 4.85
4086 5324 7.289782 ACATATTCTCTTCTATCCTTGCACTCT 59.710 37.037 0.00 0.00 0.00 3.24
4152 5390 4.906618 TGGAAGTTCTAATTGTGGTCTCC 58.093 43.478 2.25 0.00 0.00 3.71
4262 5500 0.038159 AAGGAAACTCGCAGGAGACG 60.038 55.000 0.00 0.00 43.27 4.18
4310 5548 3.834231 AGCCAGTTTCAATAGGTTTGCAT 59.166 39.130 0.00 0.00 0.00 3.96
4460 5701 2.061848 TGTTTGAGGTTCATCCCCAGA 58.938 47.619 0.00 0.00 36.75 3.86
4558 5801 2.808202 GCAGGATGAGCGATACATGGTT 60.808 50.000 0.00 0.00 39.69 3.67
4606 5849 2.094762 ATGCGTTACTCAAGGACCAC 57.905 50.000 0.00 0.00 0.00 4.16
4810 6053 4.022416 AGCTCCAATCGATCAGATCACTAC 60.022 45.833 11.12 0.00 38.98 2.73
4906 6149 3.077359 CGGAACATTCAGGAAGAAAGCT 58.923 45.455 0.00 0.00 40.22 3.74
4971 6214 4.471548 TCTACTATCTAGCACTCCCAACC 58.528 47.826 0.00 0.00 0.00 3.77
4975 6218 1.729586 TCTAGCACTCCCAACCACTT 58.270 50.000 0.00 0.00 0.00 3.16
4976 6219 1.347707 TCTAGCACTCCCAACCACTTG 59.652 52.381 0.00 0.00 0.00 3.16
5040 6283 5.476945 ACATGACTAACCACATTCCTTTTCC 59.523 40.000 0.00 0.00 0.00 3.13
5147 6390 6.884832 TCACTATTTCCATTTACCATCGACT 58.115 36.000 0.00 0.00 0.00 4.18
5172 6415 6.956435 TGGATGATACCATCTCTAGCTGTTAT 59.044 38.462 0.00 0.00 46.45 1.89
5193 6477 7.544566 TGTTATTCTAGCTTTTTCGACGAAGAT 59.455 33.333 10.61 0.52 0.00 2.40
5290 6574 0.468226 TATCATCTCGTGCAACCCCC 59.532 55.000 0.00 0.00 0.00 5.40
5311 6595 4.110482 CCTAACCGCTGTATCAACTACAC 58.890 47.826 0.00 0.00 35.38 2.90
5398 6683 5.766150 TTACACCAGAAATCTGTTGTTGG 57.234 39.130 17.07 1.34 45.46 3.77
5433 6718 2.398498 CTTGAGACTTGTCAGGTCGTG 58.602 52.381 9.25 0.00 38.58 4.35
5438 6723 2.169769 AGACTTGTCAGGTCGTGGAAAA 59.830 45.455 9.25 0.00 38.58 2.29
5623 6926 2.028484 TGAGTGGTGTTCGTCGGC 59.972 61.111 0.00 0.00 0.00 5.54
5624 6927 2.338984 GAGTGGTGTTCGTCGGCT 59.661 61.111 0.00 0.00 0.00 5.52
5625 6928 2.022129 GAGTGGTGTTCGTCGGCTG 61.022 63.158 0.00 0.00 0.00 4.85
5626 6929 3.712881 GTGGTGTTCGTCGGCTGC 61.713 66.667 0.00 0.00 0.00 5.25
5630 6933 4.717629 TGTTCGTCGGCTGCGGAG 62.718 66.667 10.36 0.00 0.00 4.63
5631 6934 4.719369 GTTCGTCGGCTGCGGAGT 62.719 66.667 10.36 0.00 0.00 3.85
5632 6935 4.415332 TTCGTCGGCTGCGGAGTC 62.415 66.667 10.36 0.75 0.00 3.36
5637 6940 3.041940 CGGCTGCGGAGTCGTTTT 61.042 61.111 23.50 0.00 42.60 2.43
5638 6941 2.861006 GGCTGCGGAGTCGTTTTC 59.139 61.111 5.62 0.00 38.89 2.29
5639 6942 2.470286 GCTGCGGAGTCGTTTTCG 59.530 61.111 5.62 0.00 45.64 3.46
5640 6943 3.011760 GCTGCGGAGTCGTTTTCGG 62.012 63.158 5.62 0.00 44.25 4.30
5683 6987 2.335316 TTTTGTTGACCTGCCGTACT 57.665 45.000 0.00 0.00 0.00 2.73
5685 6989 1.873698 TTGTTGACCTGCCGTACTTC 58.126 50.000 0.00 0.00 0.00 3.01
5698 7002 3.447918 CGTACTTCGGGATATGGTGTT 57.552 47.619 0.00 0.00 35.71 3.32
5699 7003 3.378339 CGTACTTCGGGATATGGTGTTC 58.622 50.000 0.00 0.00 35.71 3.18
5700 7004 2.596904 ACTTCGGGATATGGTGTTCG 57.403 50.000 0.00 0.00 0.00 3.95
5701 7005 2.104967 ACTTCGGGATATGGTGTTCGA 58.895 47.619 0.00 0.00 0.00 3.71
5702 7006 2.159142 ACTTCGGGATATGGTGTTCGAC 60.159 50.000 0.00 0.00 0.00 4.20
5713 7017 2.132762 GGTGTTCGACTGTTCGTCATT 58.867 47.619 0.00 0.00 46.01 2.57
5752 7056 5.550070 GCTTGTTGTAAGTTGCAGTTTTTG 58.450 37.500 0.00 0.00 0.00 2.44
5942 7295 3.077359 ACAGCATTTTCTGGTACTCTGC 58.923 45.455 0.00 0.00 38.36 4.26
5943 7296 3.244700 ACAGCATTTTCTGGTACTCTGCT 60.245 43.478 0.00 0.00 38.93 4.24
5944 7297 3.126514 CAGCATTTTCTGGTACTCTGCTG 59.873 47.826 7.17 7.17 46.06 4.41
5945 7298 2.159462 GCATTTTCTGGTACTCTGCTGC 60.159 50.000 0.00 0.00 0.00 5.25
5946 7299 2.928801 TTTTCTGGTACTCTGCTGCA 57.071 45.000 0.88 0.88 0.00 4.41
5947 7300 3.423539 TTTTCTGGTACTCTGCTGCAT 57.576 42.857 1.31 0.00 0.00 3.96
5975 7328 1.394266 GGGTTAGTACGGCCGATGGA 61.394 60.000 35.90 11.63 0.00 3.41
5991 7344 2.095252 GGAGGCGAAACGAGCTGTC 61.095 63.158 0.00 0.00 34.52 3.51
5994 7352 3.119096 GCGAAACGAGCTGTCCCC 61.119 66.667 0.00 0.00 0.00 4.81
5998 7356 1.605753 GAAACGAGCTGTCCCCTTTT 58.394 50.000 0.00 0.00 0.00 2.27
6030 7388 7.547722 GGATCCTTTTCTTCTTCTTCTGAGTAC 59.452 40.741 3.84 0.00 0.00 2.73
6033 7391 8.798402 TCCTTTTCTTCTTCTTCTGAGTACTAG 58.202 37.037 0.00 0.00 0.00 2.57
6034 7392 8.581578 CCTTTTCTTCTTCTTCTGAGTACTAGT 58.418 37.037 0.00 0.00 0.00 2.57
6039 7397 9.607988 TCTTCTTCTTCTGAGTACTAGTAGATG 57.392 37.037 1.87 1.69 0.00 2.90
6040 7398 9.391006 CTTCTTCTTCTGAGTACTAGTAGATGT 57.609 37.037 1.87 0.00 0.00 3.06
6041 7399 8.725405 TCTTCTTCTGAGTACTAGTAGATGTG 57.275 38.462 1.87 0.84 0.00 3.21
6042 7400 6.928979 TCTTCTGAGTACTAGTAGATGTGC 57.071 41.667 1.87 0.00 0.00 4.57
6043 7401 6.415573 TCTTCTGAGTACTAGTAGATGTGCA 58.584 40.000 1.87 0.00 0.00 4.57
6044 7402 6.316640 TCTTCTGAGTACTAGTAGATGTGCAC 59.683 42.308 10.75 10.75 0.00 4.57
6045 7403 4.571176 TCTGAGTACTAGTAGATGTGCACG 59.429 45.833 13.13 0.00 0.00 5.34
6046 7404 4.259356 TGAGTACTAGTAGATGTGCACGT 58.741 43.478 12.38 12.38 0.00 4.49
6047 7405 4.094442 TGAGTACTAGTAGATGTGCACGTG 59.906 45.833 18.17 12.28 0.00 4.49
6048 7406 2.279582 ACTAGTAGATGTGCACGTGC 57.720 50.000 33.11 33.11 42.50 5.34
6064 7422 2.700329 TGCAATGCACGTGTTGAGA 58.300 47.368 19.70 5.35 31.71 3.27
6065 7423 1.020437 TGCAATGCACGTGTTGAGAA 58.980 45.000 19.70 4.72 31.71 2.87
6066 7424 1.403323 TGCAATGCACGTGTTGAGAAA 59.597 42.857 19.70 2.66 31.71 2.52
6067 7425 2.046313 GCAATGCACGTGTTGAGAAAG 58.954 47.619 19.70 3.97 0.00 2.62
6068 7426 2.541588 GCAATGCACGTGTTGAGAAAGT 60.542 45.455 19.70 0.00 0.00 2.66
6069 7427 3.694734 CAATGCACGTGTTGAGAAAGTT 58.305 40.909 18.38 0.00 0.00 2.66
6070 7428 4.788201 GCAATGCACGTGTTGAGAAAGTTA 60.788 41.667 19.70 0.00 0.00 2.24
6071 7429 4.732285 ATGCACGTGTTGAGAAAGTTAG 57.268 40.909 18.38 0.00 0.00 2.34
6072 7430 3.527533 TGCACGTGTTGAGAAAGTTAGT 58.472 40.909 18.38 0.00 0.00 2.24
6073 7431 3.554324 TGCACGTGTTGAGAAAGTTAGTC 59.446 43.478 18.38 0.00 0.00 2.59
6074 7432 3.554324 GCACGTGTTGAGAAAGTTAGTCA 59.446 43.478 18.38 0.00 0.00 3.41
6075 7433 4.211374 GCACGTGTTGAGAAAGTTAGTCAT 59.789 41.667 18.38 0.00 0.00 3.06
6076 7434 5.404366 GCACGTGTTGAGAAAGTTAGTCATA 59.596 40.000 18.38 0.00 0.00 2.15
6077 7435 6.073980 GCACGTGTTGAGAAAGTTAGTCATAA 60.074 38.462 18.38 0.00 0.00 1.90
6078 7436 7.281484 CACGTGTTGAGAAAGTTAGTCATAAC 58.719 38.462 7.58 0.00 41.43 1.89
6079 7437 6.982141 ACGTGTTGAGAAAGTTAGTCATAACA 59.018 34.615 0.00 0.00 43.21 2.41
6080 7438 7.493320 ACGTGTTGAGAAAGTTAGTCATAACAA 59.507 33.333 0.00 0.00 43.21 2.83
6081 7439 8.495949 CGTGTTGAGAAAGTTAGTCATAACAAT 58.504 33.333 0.00 0.00 43.21 2.71
6082 7440 9.599322 GTGTTGAGAAAGTTAGTCATAACAATG 57.401 33.333 0.00 0.00 43.21 2.82
6083 7441 8.289618 TGTTGAGAAAGTTAGTCATAACAATGC 58.710 33.333 1.41 0.00 43.21 3.56
6084 7442 7.060600 TGAGAAAGTTAGTCATAACAATGCG 57.939 36.000 1.41 0.00 43.21 4.73
6085 7443 6.871492 TGAGAAAGTTAGTCATAACAATGCGA 59.129 34.615 0.00 0.00 43.21 5.10
6086 7444 7.549134 TGAGAAAGTTAGTCATAACAATGCGAT 59.451 33.333 0.00 0.00 43.21 4.58
6087 7445 7.688372 AGAAAGTTAGTCATAACAATGCGATG 58.312 34.615 0.00 0.00 43.21 3.84
6088 7446 7.549134 AGAAAGTTAGTCATAACAATGCGATGA 59.451 33.333 0.00 0.00 43.21 2.92
6089 7447 7.792374 AAGTTAGTCATAACAATGCGATGAT 57.208 32.000 1.72 0.00 43.21 2.45
6090 7448 7.792374 AGTTAGTCATAACAATGCGATGATT 57.208 32.000 1.72 0.93 43.21 2.57
6091 7449 7.855545 AGTTAGTCATAACAATGCGATGATTC 58.144 34.615 1.72 0.00 43.21 2.52
6092 7450 7.495606 AGTTAGTCATAACAATGCGATGATTCA 59.504 33.333 1.72 0.00 43.21 2.57
6093 7451 6.296365 AGTCATAACAATGCGATGATTCAG 57.704 37.500 1.72 0.00 32.48 3.02
6094 7452 6.051074 AGTCATAACAATGCGATGATTCAGA 58.949 36.000 1.72 0.00 32.48 3.27
6095 7453 6.018425 AGTCATAACAATGCGATGATTCAGAC 60.018 38.462 1.72 0.00 32.48 3.51
6096 7454 5.816777 TCATAACAATGCGATGATTCAGACA 59.183 36.000 0.00 0.00 0.00 3.41
6097 7455 6.315891 TCATAACAATGCGATGATTCAGACAA 59.684 34.615 0.00 0.00 0.00 3.18
6098 7456 5.571784 AACAATGCGATGATTCAGACAAT 57.428 34.783 0.00 0.00 0.00 2.71
6099 7457 4.916870 ACAATGCGATGATTCAGACAATG 58.083 39.130 0.00 0.00 0.00 2.82
6100 7458 4.397103 ACAATGCGATGATTCAGACAATGT 59.603 37.500 0.00 0.00 0.00 2.71
6101 7459 5.585844 ACAATGCGATGATTCAGACAATGTA 59.414 36.000 5.66 0.00 0.00 2.29
6102 7460 6.093909 ACAATGCGATGATTCAGACAATGTAA 59.906 34.615 5.66 0.00 0.00 2.41
6103 7461 6.682423 ATGCGATGATTCAGACAATGTAAA 57.318 33.333 0.00 0.00 0.00 2.01
6104 7462 6.110543 TGCGATGATTCAGACAATGTAAAG 57.889 37.500 0.00 0.00 0.00 1.85
6105 7463 5.643348 TGCGATGATTCAGACAATGTAAAGT 59.357 36.000 0.00 0.00 0.00 2.66
6106 7464 6.149308 TGCGATGATTCAGACAATGTAAAGTT 59.851 34.615 0.00 0.00 0.00 2.66
6107 7465 7.333174 TGCGATGATTCAGACAATGTAAAGTTA 59.667 33.333 0.00 0.00 0.00 2.24
6108 7466 7.636359 GCGATGATTCAGACAATGTAAAGTTAC 59.364 37.037 0.00 0.00 0.00 2.50
6109 7467 8.655970 CGATGATTCAGACAATGTAAAGTTACA 58.344 33.333 6.37 6.37 46.55 2.41
6110 7468 9.760660 GATGATTCAGACAATGTAAAGTTACAC 57.239 33.333 6.05 0.00 45.47 2.90
6111 7469 8.669946 TGATTCAGACAATGTAAAGTTACACA 57.330 30.769 6.05 0.00 45.47 3.72
6112 7470 9.283768 TGATTCAGACAATGTAAAGTTACACAT 57.716 29.630 6.05 0.00 45.47 3.21
6115 7473 9.772973 TTCAGACAATGTAAAGTTACACATAGT 57.227 29.630 6.05 3.45 45.47 2.12
6116 7474 9.772973 TCAGACAATGTAAAGTTACACATAGTT 57.227 29.630 6.05 0.00 45.47 2.24
6124 7482 9.142515 TGTAAAGTTACACATAGTTAATCCACG 57.857 33.333 0.00 0.00 38.64 4.94
6125 7483 9.143631 GTAAAGTTACACATAGTTAATCCACGT 57.856 33.333 0.00 0.00 33.88 4.49
6126 7484 8.611654 AAAGTTACACATAGTTAATCCACGTT 57.388 30.769 0.00 0.00 0.00 3.99
6127 7485 7.591006 AGTTACACATAGTTAATCCACGTTG 57.409 36.000 0.00 0.00 0.00 4.10
6128 7486 4.939509 ACACATAGTTAATCCACGTTGC 57.060 40.909 0.00 0.00 0.00 4.17
6129 7487 4.575885 ACACATAGTTAATCCACGTTGCT 58.424 39.130 0.00 0.00 0.00 3.91
6130 7488 5.726397 ACACATAGTTAATCCACGTTGCTA 58.274 37.500 0.00 0.00 0.00 3.49
6131 7489 6.167685 ACACATAGTTAATCCACGTTGCTAA 58.832 36.000 0.00 0.00 0.00 3.09
6132 7490 6.821665 ACACATAGTTAATCCACGTTGCTAAT 59.178 34.615 0.00 0.00 0.00 1.73
6133 7491 7.335924 ACACATAGTTAATCCACGTTGCTAATT 59.664 33.333 0.00 0.00 0.00 1.40
6134 7492 8.822855 CACATAGTTAATCCACGTTGCTAATTA 58.177 33.333 0.00 0.00 0.00 1.40
6135 7493 8.823818 ACATAGTTAATCCACGTTGCTAATTAC 58.176 33.333 0.00 0.00 0.00 1.89
6136 7494 8.822855 CATAGTTAATCCACGTTGCTAATTACA 58.177 33.333 0.00 0.00 0.00 2.41
6137 7495 7.303634 AGTTAATCCACGTTGCTAATTACAG 57.696 36.000 0.00 0.00 0.00 2.74
6138 7496 7.101054 AGTTAATCCACGTTGCTAATTACAGA 58.899 34.615 0.00 0.00 0.00 3.41
6139 7497 7.769044 AGTTAATCCACGTTGCTAATTACAGAT 59.231 33.333 0.00 0.00 0.00 2.90
6140 7498 9.037737 GTTAATCCACGTTGCTAATTACAGATA 57.962 33.333 0.00 0.00 0.00 1.98
6141 7499 7.715265 AATCCACGTTGCTAATTACAGATAG 57.285 36.000 0.00 0.00 0.00 2.08
6142 7500 6.459670 TCCACGTTGCTAATTACAGATAGA 57.540 37.500 0.00 0.00 0.00 1.98
6143 7501 6.869695 TCCACGTTGCTAATTACAGATAGAA 58.130 36.000 0.00 0.00 0.00 2.10
6144 7502 6.978659 TCCACGTTGCTAATTACAGATAGAAG 59.021 38.462 0.00 0.00 0.00 2.85
6145 7503 6.978659 CCACGTTGCTAATTACAGATAGAAGA 59.021 38.462 0.00 0.00 0.00 2.87
6146 7504 7.168302 CCACGTTGCTAATTACAGATAGAAGAG 59.832 40.741 0.00 0.00 0.00 2.85
6147 7505 7.915923 CACGTTGCTAATTACAGATAGAAGAGA 59.084 37.037 0.00 0.00 0.00 3.10
6148 7506 8.467598 ACGTTGCTAATTACAGATAGAAGAGAA 58.532 33.333 0.00 0.00 0.00 2.87
6149 7507 8.963130 CGTTGCTAATTACAGATAGAAGAGAAG 58.037 37.037 0.00 0.00 0.00 2.85
6150 7508 9.255304 GTTGCTAATTACAGATAGAAGAGAAGG 57.745 37.037 0.00 0.00 0.00 3.46
6151 7509 8.540507 TGCTAATTACAGATAGAAGAGAAGGT 57.459 34.615 0.00 0.00 0.00 3.50
6152 7510 8.417106 TGCTAATTACAGATAGAAGAGAAGGTG 58.583 37.037 0.00 0.00 0.00 4.00
6153 7511 8.417884 GCTAATTACAGATAGAAGAGAAGGTGT 58.582 37.037 0.00 0.00 0.00 4.16
6156 7514 7.540474 TTACAGATAGAAGAGAAGGTGTTGT 57.460 36.000 0.00 0.00 0.00 3.32
6157 7515 8.645814 TTACAGATAGAAGAGAAGGTGTTGTA 57.354 34.615 0.00 0.00 0.00 2.41
6158 7516 7.726033 ACAGATAGAAGAGAAGGTGTTGTAT 57.274 36.000 0.00 0.00 0.00 2.29
6159 7517 8.140112 ACAGATAGAAGAGAAGGTGTTGTATT 57.860 34.615 0.00 0.00 0.00 1.89
6160 7518 8.598041 ACAGATAGAAGAGAAGGTGTTGTATTT 58.402 33.333 0.00 0.00 0.00 1.40
6161 7519 8.877779 CAGATAGAAGAGAAGGTGTTGTATTTG 58.122 37.037 0.00 0.00 0.00 2.32
6162 7520 8.816894 AGATAGAAGAGAAGGTGTTGTATTTGA 58.183 33.333 0.00 0.00 0.00 2.69
6163 7521 9.436957 GATAGAAGAGAAGGTGTTGTATTTGAA 57.563 33.333 0.00 0.00 0.00 2.69
6164 7522 7.497925 AGAAGAGAAGGTGTTGTATTTGAAC 57.502 36.000 0.00 0.00 0.00 3.18
6165 7523 6.486993 AGAAGAGAAGGTGTTGTATTTGAACC 59.513 38.462 0.00 0.00 0.00 3.62
6166 7524 5.941788 AGAGAAGGTGTTGTATTTGAACCT 58.058 37.500 0.00 0.00 43.10 3.50
6167 7525 5.765182 AGAGAAGGTGTTGTATTTGAACCTG 59.235 40.000 0.00 0.00 40.37 4.00
6168 7526 5.690865 AGAAGGTGTTGTATTTGAACCTGA 58.309 37.500 0.00 0.00 40.37 3.86
6169 7527 6.126409 AGAAGGTGTTGTATTTGAACCTGAA 58.874 36.000 0.00 0.00 40.37 3.02
6170 7528 6.777580 AGAAGGTGTTGTATTTGAACCTGAAT 59.222 34.615 0.00 0.00 40.37 2.57
6171 7529 6.976934 AGGTGTTGTATTTGAACCTGAATT 57.023 33.333 0.00 0.00 39.78 2.17
6172 7530 6.748132 AGGTGTTGTATTTGAACCTGAATTG 58.252 36.000 0.00 0.00 39.78 2.32
6173 7531 5.405269 GGTGTTGTATTTGAACCTGAATTGC 59.595 40.000 0.00 0.00 0.00 3.56
6174 7532 6.215845 GTGTTGTATTTGAACCTGAATTGCT 58.784 36.000 0.00 0.00 0.00 3.91
6175 7533 7.367285 GTGTTGTATTTGAACCTGAATTGCTA 58.633 34.615 0.00 0.00 0.00 3.49
6176 7534 7.326063 GTGTTGTATTTGAACCTGAATTGCTAC 59.674 37.037 0.00 0.00 0.00 3.58
6177 7535 6.509418 TGTATTTGAACCTGAATTGCTACC 57.491 37.500 0.00 0.00 0.00 3.18
6178 7536 4.701956 ATTTGAACCTGAATTGCTACCG 57.298 40.909 0.00 0.00 0.00 4.02
6179 7537 3.410631 TTGAACCTGAATTGCTACCGA 57.589 42.857 0.00 0.00 0.00 4.69
6180 7538 2.972625 TGAACCTGAATTGCTACCGAG 58.027 47.619 0.00 0.00 0.00 4.63
6181 7539 2.565391 TGAACCTGAATTGCTACCGAGA 59.435 45.455 0.00 0.00 0.00 4.04
6182 7540 3.197766 TGAACCTGAATTGCTACCGAGAT 59.802 43.478 0.00 0.00 0.00 2.75
6183 7541 4.404394 TGAACCTGAATTGCTACCGAGATA 59.596 41.667 0.00 0.00 0.00 1.98
6184 7542 5.070446 TGAACCTGAATTGCTACCGAGATAT 59.930 40.000 0.00 0.00 0.00 1.63
6185 7543 6.266786 TGAACCTGAATTGCTACCGAGATATA 59.733 38.462 0.00 0.00 0.00 0.86
6186 7544 6.859112 ACCTGAATTGCTACCGAGATATAT 57.141 37.500 0.00 0.00 0.00 0.86
6187 7545 7.956328 ACCTGAATTGCTACCGAGATATATA 57.044 36.000 0.00 0.00 0.00 0.86
6188 7546 8.540507 ACCTGAATTGCTACCGAGATATATAT 57.459 34.615 0.00 0.00 0.00 0.86
6189 7547 8.417106 ACCTGAATTGCTACCGAGATATATATG 58.583 37.037 0.00 0.00 0.00 1.78
6190 7548 7.869937 CCTGAATTGCTACCGAGATATATATGG 59.130 40.741 0.00 0.00 0.00 2.74
6191 7549 7.210174 TGAATTGCTACCGAGATATATATGGC 58.790 38.462 0.00 0.00 0.00 4.40
6192 7550 6.985653 ATTGCTACCGAGATATATATGGCT 57.014 37.500 0.00 0.00 0.00 4.75
6193 7551 6.791867 TTGCTACCGAGATATATATGGCTT 57.208 37.500 0.00 0.00 0.00 4.35
6194 7552 6.149129 TGCTACCGAGATATATATGGCTTG 57.851 41.667 0.00 0.00 0.00 4.01
6195 7553 5.069119 TGCTACCGAGATATATATGGCTTGG 59.931 44.000 16.02 16.02 37.82 3.61
6196 7554 5.302059 GCTACCGAGATATATATGGCTTGGA 59.698 44.000 21.16 10.05 35.81 3.53
6197 7555 6.015010 GCTACCGAGATATATATGGCTTGGAT 60.015 42.308 21.16 12.41 35.81 3.41
6198 7556 6.814954 ACCGAGATATATATGGCTTGGATT 57.185 37.500 21.16 5.59 35.81 3.01
6199 7557 7.200434 ACCGAGATATATATGGCTTGGATTT 57.800 36.000 21.16 5.09 35.81 2.17
6200 7558 8.319057 ACCGAGATATATATGGCTTGGATTTA 57.681 34.615 21.16 0.00 35.81 1.40
6201 7559 8.424918 ACCGAGATATATATGGCTTGGATTTAG 58.575 37.037 21.16 3.63 35.81 1.85
6202 7560 7.386299 CCGAGATATATATGGCTTGGATTTAGC 59.614 40.741 13.80 0.00 34.45 3.09
6203 7561 8.147058 CGAGATATATATGGCTTGGATTTAGCT 58.853 37.037 0.00 0.00 38.67 3.32
6204 7562 9.487790 GAGATATATATGGCTTGGATTTAGCTC 57.512 37.037 0.00 0.00 38.67 4.09
6205 7563 9.223291 AGATATATATGGCTTGGATTTAGCTCT 57.777 33.333 0.00 0.00 38.67 4.09
6209 7567 4.090761 TGGCTTGGATTTAGCTCTATGG 57.909 45.455 0.00 0.00 38.67 2.74
6210 7568 3.716353 TGGCTTGGATTTAGCTCTATGGA 59.284 43.478 0.00 0.00 38.67 3.41
6211 7569 4.068599 GGCTTGGATTTAGCTCTATGGAC 58.931 47.826 0.00 0.00 38.67 4.02
6212 7570 4.068599 GCTTGGATTTAGCTCTATGGACC 58.931 47.826 0.00 0.00 35.74 4.46
6213 7571 4.646572 CTTGGATTTAGCTCTATGGACCC 58.353 47.826 0.00 0.00 0.00 4.46
6214 7572 2.979678 TGGATTTAGCTCTATGGACCCC 59.020 50.000 0.00 0.00 0.00 4.95
6215 7573 2.028020 GGATTTAGCTCTATGGACCCCG 60.028 54.545 0.00 0.00 0.00 5.73
6216 7574 2.464796 TTTAGCTCTATGGACCCCGA 57.535 50.000 0.00 0.00 0.00 5.14
6217 7575 2.696526 TTAGCTCTATGGACCCCGAT 57.303 50.000 0.00 0.00 0.00 4.18
6218 7576 3.820195 TTAGCTCTATGGACCCCGATA 57.180 47.619 0.00 0.00 0.00 2.92
6219 7577 2.696526 AGCTCTATGGACCCCGATAA 57.303 50.000 0.00 0.00 0.00 1.75
6220 7578 2.972348 AGCTCTATGGACCCCGATAAA 58.028 47.619 0.00 0.00 0.00 1.40
6221 7579 3.314693 AGCTCTATGGACCCCGATAAAA 58.685 45.455 0.00 0.00 0.00 1.52
6222 7580 3.325135 AGCTCTATGGACCCCGATAAAAG 59.675 47.826 0.00 0.00 0.00 2.27
6223 7581 3.323979 GCTCTATGGACCCCGATAAAAGA 59.676 47.826 0.00 0.00 0.00 2.52
6224 7582 4.799917 GCTCTATGGACCCCGATAAAAGAC 60.800 50.000 0.00 0.00 0.00 3.01
6225 7583 4.291792 TCTATGGACCCCGATAAAAGACA 58.708 43.478 0.00 0.00 0.00 3.41
6226 7584 3.560636 ATGGACCCCGATAAAAGACAG 57.439 47.619 0.00 0.00 0.00 3.51
6227 7585 2.542550 TGGACCCCGATAAAAGACAGA 58.457 47.619 0.00 0.00 0.00 3.41
6228 7586 3.112263 TGGACCCCGATAAAAGACAGAT 58.888 45.455 0.00 0.00 0.00 2.90
6229 7587 4.291792 TGGACCCCGATAAAAGACAGATA 58.708 43.478 0.00 0.00 0.00 1.98
6230 7588 4.344102 TGGACCCCGATAAAAGACAGATAG 59.656 45.833 0.00 0.00 0.00 2.08
6231 7589 4.344390 GGACCCCGATAAAAGACAGATAGT 59.656 45.833 0.00 0.00 0.00 2.12
6232 7590 5.277857 ACCCCGATAAAAGACAGATAGTG 57.722 43.478 0.00 0.00 0.00 2.74
6233 7591 4.058817 CCCCGATAAAAGACAGATAGTGC 58.941 47.826 0.00 0.00 0.00 4.40
6234 7592 4.442893 CCCCGATAAAAGACAGATAGTGCA 60.443 45.833 0.00 0.00 0.00 4.57
6235 7593 5.116180 CCCGATAAAAGACAGATAGTGCAA 58.884 41.667 0.00 0.00 0.00 4.08
6236 7594 5.760253 CCCGATAAAAGACAGATAGTGCAAT 59.240 40.000 0.00 0.00 0.00 3.56
6237 7595 6.260936 CCCGATAAAAGACAGATAGTGCAATT 59.739 38.462 0.00 0.00 0.00 2.32
6238 7596 7.348201 CCGATAAAAGACAGATAGTGCAATTC 58.652 38.462 0.00 0.00 0.00 2.17
6239 7597 7.225538 CCGATAAAAGACAGATAGTGCAATTCT 59.774 37.037 0.00 0.00 0.00 2.40
6240 7598 9.249457 CGATAAAAGACAGATAGTGCAATTCTA 57.751 33.333 0.00 0.00 0.00 2.10
6244 7602 8.885494 AAAGACAGATAGTGCAATTCTATCTC 57.115 34.615 17.93 11.05 46.08 2.75
6245 7603 7.594351 AGACAGATAGTGCAATTCTATCTCA 57.406 36.000 17.93 0.00 46.08 3.27
6246 7604 8.192743 AGACAGATAGTGCAATTCTATCTCAT 57.807 34.615 17.93 11.72 46.08 2.90
6247 7605 8.306038 AGACAGATAGTGCAATTCTATCTCATC 58.694 37.037 17.93 17.26 46.08 2.92
6248 7606 7.960262 ACAGATAGTGCAATTCTATCTCATCA 58.040 34.615 17.93 0.00 46.08 3.07
6249 7607 7.871973 ACAGATAGTGCAATTCTATCTCATCAC 59.128 37.037 17.93 0.00 46.08 3.06
6250 7608 7.062022 CAGATAGTGCAATTCTATCTCATCACG 59.938 40.741 17.93 6.73 46.08 4.35
6251 7609 5.268118 AGTGCAATTCTATCTCATCACGA 57.732 39.130 0.00 0.00 0.00 4.35
6252 7610 5.288015 AGTGCAATTCTATCTCATCACGAG 58.712 41.667 0.00 0.00 43.80 4.18
6253 7611 4.053983 TGCAATTCTATCTCATCACGAGC 58.946 43.478 0.00 0.00 41.98 5.03
6254 7612 4.053983 GCAATTCTATCTCATCACGAGCA 58.946 43.478 0.00 0.00 41.98 4.26
6255 7613 4.084641 GCAATTCTATCTCATCACGAGCAC 60.085 45.833 0.00 0.00 41.98 4.40
6256 7614 3.717400 TTCTATCTCATCACGAGCACC 57.283 47.619 0.00 0.00 41.98 5.01
6257 7615 2.937519 TCTATCTCATCACGAGCACCT 58.062 47.619 0.00 0.00 41.98 4.00
6258 7616 3.291584 TCTATCTCATCACGAGCACCTT 58.708 45.455 0.00 0.00 41.98 3.50
6259 7617 2.593346 ATCTCATCACGAGCACCTTC 57.407 50.000 0.00 0.00 41.98 3.46
6260 7618 1.550327 TCTCATCACGAGCACCTTCT 58.450 50.000 0.00 0.00 41.98 2.85
6261 7619 1.474478 TCTCATCACGAGCACCTTCTC 59.526 52.381 0.00 0.00 41.98 2.87
6262 7620 1.476085 CTCATCACGAGCACCTTCTCT 59.524 52.381 0.00 0.00 34.18 3.10
6263 7621 1.895798 TCATCACGAGCACCTTCTCTT 59.104 47.619 0.00 0.00 0.00 2.85
6264 7622 2.300152 TCATCACGAGCACCTTCTCTTT 59.700 45.455 0.00 0.00 0.00 2.52
6265 7623 2.440539 TCACGAGCACCTTCTCTTTC 57.559 50.000 0.00 0.00 0.00 2.62
6266 7624 1.686587 TCACGAGCACCTTCTCTTTCA 59.313 47.619 0.00 0.00 0.00 2.69
6267 7625 1.795286 CACGAGCACCTTCTCTTTCAC 59.205 52.381 0.00 0.00 0.00 3.18
6268 7626 1.270358 ACGAGCACCTTCTCTTTCACC 60.270 52.381 0.00 0.00 0.00 4.02
6269 7627 1.270305 CGAGCACCTTCTCTTTCACCA 60.270 52.381 0.00 0.00 0.00 4.17
6270 7628 2.613977 CGAGCACCTTCTCTTTCACCAT 60.614 50.000 0.00 0.00 0.00 3.55
6271 7629 2.746362 GAGCACCTTCTCTTTCACCATG 59.254 50.000 0.00 0.00 0.00 3.66
6272 7630 2.373169 AGCACCTTCTCTTTCACCATGA 59.627 45.455 0.00 0.00 0.00 3.07
6273 7631 2.485814 GCACCTTCTCTTTCACCATGAC 59.514 50.000 0.00 0.00 0.00 3.06
6274 7632 3.743521 CACCTTCTCTTTCACCATGACA 58.256 45.455 0.00 0.00 0.00 3.58
6275 7633 3.750130 CACCTTCTCTTTCACCATGACAG 59.250 47.826 0.00 0.00 0.00 3.51
6276 7634 3.648067 ACCTTCTCTTTCACCATGACAGA 59.352 43.478 0.00 0.00 32.80 3.41
6277 7635 4.288105 ACCTTCTCTTTCACCATGACAGAT 59.712 41.667 0.00 0.00 33.29 2.90
6278 7636 4.874966 CCTTCTCTTTCACCATGACAGATC 59.125 45.833 0.00 0.00 33.29 2.75
6279 7637 5.485620 CTTCTCTTTCACCATGACAGATCA 58.514 41.667 0.00 0.00 33.29 2.92
6280 7638 4.825422 TCTCTTTCACCATGACAGATCAC 58.175 43.478 0.00 0.00 37.79 3.06
6281 7639 4.284234 TCTCTTTCACCATGACAGATCACA 59.716 41.667 0.00 0.00 37.79 3.58
6282 7640 4.318332 TCTTTCACCATGACAGATCACAC 58.682 43.478 0.00 0.00 37.79 3.82
6283 7641 3.767902 TTCACCATGACAGATCACACA 57.232 42.857 0.00 0.00 37.79 3.72
6284 7642 3.767902 TCACCATGACAGATCACACAA 57.232 42.857 0.00 0.00 37.79 3.33
6285 7643 3.402110 TCACCATGACAGATCACACAAC 58.598 45.455 0.00 0.00 37.79 3.32
6286 7644 3.071457 TCACCATGACAGATCACACAACT 59.929 43.478 0.00 0.00 37.79 3.16
6287 7645 3.434641 CACCATGACAGATCACACAACTC 59.565 47.826 0.00 0.00 37.79 3.01
6288 7646 3.326006 ACCATGACAGATCACACAACTCT 59.674 43.478 0.00 0.00 37.79 3.24
6289 7647 4.528206 ACCATGACAGATCACACAACTCTA 59.472 41.667 0.00 0.00 37.79 2.43
6290 7648 5.188555 ACCATGACAGATCACACAACTCTAT 59.811 40.000 0.00 0.00 37.79 1.98
6291 7649 6.111382 CCATGACAGATCACACAACTCTATT 58.889 40.000 0.00 0.00 37.79 1.73
6292 7650 6.596888 CCATGACAGATCACACAACTCTATTT 59.403 38.462 0.00 0.00 37.79 1.40
6293 7651 7.201591 CCATGACAGATCACACAACTCTATTTC 60.202 40.741 0.00 0.00 37.79 2.17
6294 7652 6.997655 TGACAGATCACACAACTCTATTTCT 58.002 36.000 0.00 0.00 0.00 2.52
6295 7653 7.445121 TGACAGATCACACAACTCTATTTCTT 58.555 34.615 0.00 0.00 0.00 2.52
6296 7654 7.600375 TGACAGATCACACAACTCTATTTCTTC 59.400 37.037 0.00 0.00 0.00 2.87
6297 7655 7.445121 ACAGATCACACAACTCTATTTCTTCA 58.555 34.615 0.00 0.00 0.00 3.02
6298 7656 7.933577 ACAGATCACACAACTCTATTTCTTCAA 59.066 33.333 0.00 0.00 0.00 2.69
6299 7657 8.777413 CAGATCACACAACTCTATTTCTTCAAA 58.223 33.333 0.00 0.00 0.00 2.69
6300 7658 9.342308 AGATCACACAACTCTATTTCTTCAAAA 57.658 29.630 0.00 0.00 0.00 2.44
6301 7659 9.387123 GATCACACAACTCTATTTCTTCAAAAC 57.613 33.333 0.00 0.00 0.00 2.43
6302 7660 7.703328 TCACACAACTCTATTTCTTCAAAACC 58.297 34.615 0.00 0.00 0.00 3.27
6303 7661 6.918022 CACACAACTCTATTTCTTCAAAACCC 59.082 38.462 0.00 0.00 0.00 4.11
6304 7662 6.605594 ACACAACTCTATTTCTTCAAAACCCA 59.394 34.615 0.00 0.00 0.00 4.51
6305 7663 7.287696 ACACAACTCTATTTCTTCAAAACCCAT 59.712 33.333 0.00 0.00 0.00 4.00
6306 7664 8.792633 CACAACTCTATTTCTTCAAAACCCATA 58.207 33.333 0.00 0.00 0.00 2.74
6307 7665 9.014297 ACAACTCTATTTCTTCAAAACCCATAG 57.986 33.333 0.00 0.00 0.00 2.23
6308 7666 9.014297 CAACTCTATTTCTTCAAAACCCATAGT 57.986 33.333 0.00 0.00 0.00 2.12
6314 7672 7.429636 TTTCTTCAAAACCCATAGTAAGACG 57.570 36.000 0.00 0.00 0.00 4.18
6315 7673 6.105397 TCTTCAAAACCCATAGTAAGACGT 57.895 37.500 0.00 0.00 0.00 4.34
6316 7674 5.929992 TCTTCAAAACCCATAGTAAGACGTG 59.070 40.000 0.00 0.00 0.00 4.49
6317 7675 5.217978 TCAAAACCCATAGTAAGACGTGT 57.782 39.130 0.00 0.00 0.00 4.49
6318 7676 6.343716 TCAAAACCCATAGTAAGACGTGTA 57.656 37.500 0.00 0.00 0.00 2.90
6319 7677 6.392354 TCAAAACCCATAGTAAGACGTGTAG 58.608 40.000 0.00 0.00 0.00 2.74
6320 7678 6.209192 TCAAAACCCATAGTAAGACGTGTAGA 59.791 38.462 0.00 0.00 0.00 2.59
6321 7679 6.594788 AAACCCATAGTAAGACGTGTAGAA 57.405 37.500 0.00 0.00 0.00 2.10
6322 7680 5.573337 ACCCATAGTAAGACGTGTAGAAC 57.427 43.478 0.00 0.00 0.00 3.01
6323 7681 5.012239 ACCCATAGTAAGACGTGTAGAACA 58.988 41.667 0.00 0.00 0.00 3.18
6324 7682 5.477984 ACCCATAGTAAGACGTGTAGAACAA 59.522 40.000 0.00 0.00 0.00 2.83
6325 7683 6.015180 ACCCATAGTAAGACGTGTAGAACAAA 60.015 38.462 0.00 0.00 0.00 2.83
6326 7684 6.530534 CCCATAGTAAGACGTGTAGAACAAAG 59.469 42.308 0.00 0.00 0.00 2.77
6327 7685 6.530534 CCATAGTAAGACGTGTAGAACAAAGG 59.469 42.308 0.00 0.00 0.00 3.11
6328 7686 5.526506 AGTAAGACGTGTAGAACAAAGGT 57.473 39.130 0.00 0.00 0.00 3.50
6329 7687 5.527033 AGTAAGACGTGTAGAACAAAGGTC 58.473 41.667 0.00 0.00 0.00 3.85
6330 7688 4.667519 AAGACGTGTAGAACAAAGGTCT 57.332 40.909 0.00 0.00 37.15 3.85
6331 7689 4.667519 AGACGTGTAGAACAAAGGTCTT 57.332 40.909 0.00 0.00 34.11 3.01
6332 7690 4.618965 AGACGTGTAGAACAAAGGTCTTC 58.381 43.478 0.00 0.00 34.11 2.87
6333 7691 4.098960 AGACGTGTAGAACAAAGGTCTTCA 59.901 41.667 0.00 0.00 34.11 3.02
6334 7692 4.761975 ACGTGTAGAACAAAGGTCTTCAA 58.238 39.130 0.00 0.00 0.00 2.69
6335 7693 4.809426 ACGTGTAGAACAAAGGTCTTCAAG 59.191 41.667 0.00 3.84 0.00 3.02
6336 7694 5.047847 CGTGTAGAACAAAGGTCTTCAAGA 58.952 41.667 0.00 0.00 0.00 3.02
6337 7695 5.696724 CGTGTAGAACAAAGGTCTTCAAGAT 59.303 40.000 0.00 0.00 0.00 2.40
6338 7696 6.866770 CGTGTAGAACAAAGGTCTTCAAGATA 59.133 38.462 0.00 0.00 0.00 1.98
6339 7697 7.062371 CGTGTAGAACAAAGGTCTTCAAGATAG 59.938 40.741 0.00 0.00 0.00 2.08
6340 7698 8.088981 GTGTAGAACAAAGGTCTTCAAGATAGA 58.911 37.037 0.00 0.00 0.00 1.98
6341 7699 8.307483 TGTAGAACAAAGGTCTTCAAGATAGAG 58.693 37.037 0.00 0.00 0.00 2.43
6342 7700 6.169800 AGAACAAAGGTCTTCAAGATAGAGC 58.830 40.000 0.00 0.00 39.74 4.09
6343 7701 5.489792 ACAAAGGTCTTCAAGATAGAGCA 57.510 39.130 0.00 0.00 41.41 4.26
6344 7702 5.869579 ACAAAGGTCTTCAAGATAGAGCAA 58.130 37.500 0.00 0.00 41.41 3.91
6345 7703 6.299141 ACAAAGGTCTTCAAGATAGAGCAAA 58.701 36.000 0.00 0.00 41.41 3.68
6346 7704 6.205658 ACAAAGGTCTTCAAGATAGAGCAAAC 59.794 38.462 0.00 0.00 41.41 2.93
6347 7705 5.489792 AGGTCTTCAAGATAGAGCAAACA 57.510 39.130 0.00 0.00 41.41 2.83
6348 7706 5.869579 AGGTCTTCAAGATAGAGCAAACAA 58.130 37.500 0.00 0.00 41.41 2.83
6349 7707 6.299141 AGGTCTTCAAGATAGAGCAAACAAA 58.701 36.000 0.00 0.00 41.41 2.83
6350 7708 6.429385 AGGTCTTCAAGATAGAGCAAACAAAG 59.571 38.462 0.00 0.00 41.41 2.77
6351 7709 6.348868 GGTCTTCAAGATAGAGCAAACAAAGG 60.349 42.308 0.00 0.00 39.36 3.11
6352 7710 6.428159 GTCTTCAAGATAGAGCAAACAAAGGA 59.572 38.462 0.00 0.00 0.00 3.36
6353 7711 6.428159 TCTTCAAGATAGAGCAAACAAAGGAC 59.572 38.462 0.00 0.00 0.00 3.85
6354 7712 5.869579 TCAAGATAGAGCAAACAAAGGACT 58.130 37.500 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.814644 CACCACGACTATTTTTATGTGTAGGA 59.185 38.462 0.00 0.00 0.00 2.94
36 37 6.984474 CCATAATCTTACACACCACGACTATT 59.016 38.462 0.00 0.00 0.00 1.73
102 103 1.651240 GATGAGCAGTGCACGCCAAT 61.651 55.000 23.57 18.53 0.00 3.16
162 166 1.207390 CACGCAATGGTTGTTTGTGG 58.793 50.000 0.00 0.00 38.57 4.17
186 190 4.338682 ACGGACATAGAGAGTTACCATGAC 59.661 45.833 0.00 0.00 0.00 3.06
189 193 4.441634 GCAACGGACATAGAGAGTTACCAT 60.442 45.833 0.00 0.00 0.00 3.55
192 196 3.106672 CGCAACGGACATAGAGAGTTAC 58.893 50.000 0.00 0.00 0.00 2.50
297 301 5.185828 CGGGATGGTGTTCTATCTATGATCA 59.814 44.000 0.00 0.00 33.08 2.92
324 328 5.545658 ATCTTTACACGCAATGATCGTTT 57.454 34.783 0.00 0.00 38.19 3.60
326 330 5.232202 CACTATCTTTACACGCAATGATCGT 59.768 40.000 0.00 0.00 41.28 3.73
328 332 5.559035 GCCACTATCTTTACACGCAATGATC 60.559 44.000 0.00 0.00 0.00 2.92
376 382 7.149307 TCTAGTATGACACGAAAATGTGAACA 58.851 34.615 0.24 1.69 42.55 3.18
384 390 7.042725 GCATGCTTATCTAGTATGACACGAAAA 60.043 37.037 11.37 0.00 46.42 2.29
390 396 6.450545 GTCAGCATGCTTATCTAGTATGACA 58.549 40.000 19.98 0.00 46.42 3.58
391 397 5.570973 CGTCAGCATGCTTATCTAGTATGAC 59.429 44.000 19.98 17.12 46.42 3.06
392 398 5.241728 ACGTCAGCATGCTTATCTAGTATGA 59.758 40.000 19.98 6.13 46.42 2.15
393 399 5.344396 CACGTCAGCATGCTTATCTAGTATG 59.656 44.000 19.98 3.44 46.29 2.39
394 400 5.465051 CACGTCAGCATGCTTATCTAGTAT 58.535 41.667 19.98 0.00 34.76 2.12
395 401 4.793028 GCACGTCAGCATGCTTATCTAGTA 60.793 45.833 19.98 0.00 38.84 1.82
403 410 1.354337 CTACGCACGTCAGCATGCTT 61.354 55.000 19.98 0.00 39.79 3.91
420 427 8.339714 CAAAATTTACGGGAAAGCGATTATCTA 58.660 33.333 0.00 0.00 0.00 1.98
425 432 3.924073 GCAAAATTTACGGGAAAGCGATT 59.076 39.130 0.00 0.00 0.00 3.34
429 436 6.401688 GGTTATTGCAAAATTTACGGGAAAGC 60.402 38.462 1.71 0.00 0.00 3.51
444 451 1.870383 GCGTCGGTGGTTATTGCAA 59.130 52.632 0.00 0.00 0.00 4.08
471 478 5.508280 TTATGGCTGGTAGGTTGTTACTT 57.492 39.130 0.00 0.00 0.00 2.24
487 494 9.695526 TTCTTGCACATAATGAATATTTATGGC 57.304 29.630 9.41 9.57 0.00 4.40
527 534 3.092334 ACGCAACATATGTATCAGCGA 57.908 42.857 32.46 0.00 45.78 4.93
536 543 3.792956 GGAAGCATGAAACGCAACATATG 59.207 43.478 0.00 0.00 0.00 1.78
546 553 4.241590 TGTGTCATTGGAAGCATGAAAC 57.758 40.909 0.00 0.00 38.79 2.78
547 554 4.341806 AGTTGTGTCATTGGAAGCATGAAA 59.658 37.500 0.00 0.00 32.37 2.69
558 565 4.378356 CGTGGTTATCCAGTTGTGTCATTG 60.378 45.833 0.00 0.00 45.24 2.82
565 573 0.672401 CGGCGTGGTTATCCAGTTGT 60.672 55.000 0.00 0.00 45.24 3.32
586 594 3.575805 GGGAAAAGATGATTGGGGCATA 58.424 45.455 0.00 0.00 0.00 3.14
596 604 4.202482 TGGAAGTTTACGGGGAAAAGATGA 60.202 41.667 0.00 0.00 0.00 2.92
603 611 4.202545 TGGTTATTGGAAGTTTACGGGGAA 60.203 41.667 0.00 0.00 0.00 3.97
655 663 1.080569 GCAATGACTGTTTGCGGGG 60.081 57.895 1.84 0.00 39.98 5.73
659 667 1.122849 CACACGCAATGACTGTTTGC 58.877 50.000 7.05 7.05 44.68 3.68
660 668 2.287644 TCTCACACGCAATGACTGTTTG 59.712 45.455 0.00 0.00 0.00 2.93
781 1878 2.306847 CACCCACTTTACTTGTTGCCT 58.693 47.619 0.00 0.00 0.00 4.75
818 1915 1.202359 GGTCTCTCTTTGCTCCGCTAG 60.202 57.143 0.00 0.00 0.00 3.42
842 1939 5.742063 AGAGAAAAGGTTTTATAGACCGGG 58.258 41.667 6.32 0.00 42.11 5.73
966 2064 4.087892 CACAGGACAGGGAGGCGG 62.088 72.222 0.00 0.00 0.00 6.13
1390 2506 3.810896 GACGCGGCAATTCCACCC 61.811 66.667 7.34 0.00 34.01 4.61
1491 2607 1.001860 CGCCCAAAATCCACAACCAAT 59.998 47.619 0.00 0.00 0.00 3.16
1609 2726 1.079336 GTACACTCCTGGGCGGAAC 60.079 63.158 0.00 0.00 42.53 3.62
1613 2730 1.215647 GACAGTACACTCCTGGGCG 59.784 63.158 0.00 0.00 34.16 6.13
1630 2747 6.817765 AAAATTGCCTCGAAAGTATCAAGA 57.182 33.333 0.00 0.00 0.00 3.02
1633 2750 9.921637 AAAAATAAAATTGCCTCGAAAGTATCA 57.078 25.926 0.00 0.00 0.00 2.15
1655 2772 6.305411 TCTCCCGGTTTCACCTAAATAAAAA 58.695 36.000 0.00 0.00 35.66 1.94
1747 2865 3.529634 TTGACGGCGAAAACAATACTG 57.470 42.857 16.62 0.00 0.00 2.74
1768 2886 8.222637 ACAAACTACCTTAGTCCCAACTAAAAT 58.777 33.333 0.27 0.00 45.12 1.82
1840 2958 8.500753 TCTAAAAAGTACTTTCAGTCAGCAAA 57.499 30.769 20.78 2.23 31.45 3.68
1883 3001 5.060662 TGAGAATAAACTGACGAGGACAG 57.939 43.478 0.00 0.00 40.68 3.51
2004 3123 7.083858 GCAGCACTTTAATCTTCACATAACAA 58.916 34.615 0.00 0.00 0.00 2.83
2144 3280 4.081917 TCAGGCACAACATACGATCTTACA 60.082 41.667 0.00 0.00 0.00 2.41
2328 3464 3.425404 CAAGGTTCTTGTTGTGAACACG 58.575 45.455 8.54 0.00 43.84 4.49
2406 3543 6.310941 TGATTTGTTTACCTTGAGGATCCAA 58.689 36.000 15.82 0.00 38.94 3.53
2489 3627 8.470002 ACAGGGAGTAATAAATTTCTGATTTGC 58.530 33.333 0.00 0.00 0.00 3.68
2514 3652 6.136071 GTGTGCGTCAATTAATATGGATCAC 58.864 40.000 0.00 1.98 0.00 3.06
2515 3653 5.238432 GGTGTGCGTCAATTAATATGGATCA 59.762 40.000 0.00 0.00 0.00 2.92
2557 3695 4.178540 TGGCGCATACTTAGTACAACTTC 58.821 43.478 10.83 0.00 0.00 3.01
2588 3726 2.024751 ACTCTTCTACTCCCTCCAGTCC 60.025 54.545 0.00 0.00 0.00 3.85
2685 3823 6.418101 AGTAAAGAAGAGCATATCAGCCAAA 58.582 36.000 0.00 0.00 34.23 3.28
2707 3845 5.766670 TGCTTGATTTCTGATGACAAGAAGT 59.233 36.000 16.45 0.00 39.84 3.01
2824 3962 6.858478 GCTTTAGGTCATTGTCAAACTTCTTC 59.142 38.462 0.00 0.00 0.00 2.87
2900 4120 8.028938 CCAAGAAATGGGAAATAAAGTACAGTG 58.971 37.037 0.00 0.00 46.27 3.66
2917 4137 0.240945 GCACACGGGACCAAGAAATG 59.759 55.000 0.00 0.00 0.00 2.32
2931 4151 2.052157 GTCTCAGTTAGTCGTGCACAC 58.948 52.381 18.64 13.83 0.00 3.82
3351 4579 1.747709 ACTCAGTTGCATGCCTGATC 58.252 50.000 22.00 6.80 37.11 2.92
3385 4613 5.569355 TCAGGTCACACCATCAAATTATGT 58.431 37.500 0.00 0.00 41.95 2.29
3477 4705 3.306225 GCCCAGCTTCATGTGAAATCAAA 60.306 43.478 0.00 0.00 33.07 2.69
3658 4889 1.151668 CTCACCTGGCAAGAAACTCG 58.848 55.000 0.00 0.00 0.00 4.18
3668 4899 0.886490 CACAACAGACCTCACCTGGC 60.886 60.000 0.00 0.00 36.03 4.85
3800 5031 8.821147 TCTAGAAGTACGTTTGCATTTTCTAA 57.179 30.769 0.00 0.00 0.00 2.10
3876 5107 5.965334 CACAAATATAAGTGCCGCTTTACTG 59.035 40.000 0.00 0.00 38.57 2.74
4086 5324 3.254060 GCAGTTTCGAGCTCAATACTGA 58.746 45.455 28.96 11.62 36.07 3.41
4127 5365 6.187727 AGACCACAATTAGAACTTCCAGAA 57.812 37.500 0.00 0.00 0.00 3.02
4152 5390 7.763172 ATTAAGACAGAAGATGCGTCTAAAG 57.237 36.000 9.33 4.46 39.04 1.85
4195 5433 4.739793 ACCATGAAAGGTTGGAGAATCAA 58.260 39.130 0.00 0.00 39.34 2.57
4262 5500 4.458989 TGCCGCCAAGGATGAATAAATATC 59.541 41.667 0.00 0.00 45.00 1.63
4310 5548 5.304686 ACCACAGTCAGAAGAAACCATAA 57.695 39.130 0.00 0.00 0.00 1.90
4558 5801 8.707449 ACTTTATCCTTCGTTGGGTTATATGTA 58.293 33.333 0.00 0.00 0.00 2.29
4606 5849 1.741706 AGAATGTCATCTGGCTTTGCG 59.258 47.619 0.00 0.00 0.00 4.85
4659 5902 5.989168 ACCTAAAAGCCAAAATTACTGCAAC 59.011 36.000 0.00 0.00 0.00 4.17
4665 5908 7.626446 CAAACACACCTAAAAGCCAAAATTAC 58.374 34.615 0.00 0.00 0.00 1.89
4906 6149 4.282703 AGAAGGAGCGTTACCTGTTCTTTA 59.717 41.667 0.00 0.00 37.85 1.85
4971 6214 5.156355 GCTTGTCACAATTATGTCCAAGTG 58.844 41.667 15.32 2.60 42.30 3.16
4975 6218 2.746904 CGGCTTGTCACAATTATGTCCA 59.253 45.455 0.00 0.00 37.82 4.02
4976 6219 2.477863 GCGGCTTGTCACAATTATGTCC 60.478 50.000 0.00 0.00 37.82 4.02
5040 6283 1.843368 ATCCAACCCTGACATGCAAG 58.157 50.000 0.00 0.00 0.00 4.01
5147 6390 7.455953 AATAACAGCTAGAGATGGTATCATCCA 59.544 37.037 12.50 0.00 42.79 3.41
5172 6415 4.625742 CCATCTTCGTCGAAAAAGCTAGAA 59.374 41.667 9.30 0.00 0.00 2.10
5193 6477 1.841919 ACTCATCAGCATCATGTCCCA 59.158 47.619 0.00 0.00 0.00 4.37
5438 6723 3.314553 CATATCTCGTCCCGCGTTATTT 58.685 45.455 4.92 0.00 42.13 1.40
5476 6761 4.493747 GGTCGCCCTCGGTCTTCG 62.494 72.222 0.00 0.00 40.90 3.79
5546 6831 0.734942 GCGACGCTACTACCAGCAAA 60.735 55.000 13.73 0.00 41.88 3.68
5623 6926 0.942410 TTCCGAAAACGACTCCGCAG 60.942 55.000 0.00 0.00 39.95 5.18
5624 6927 0.320073 ATTCCGAAAACGACTCCGCA 60.320 50.000 0.00 0.00 39.95 5.69
5625 6928 0.094730 CATTCCGAAAACGACTCCGC 59.905 55.000 0.00 0.00 39.95 5.54
5626 6929 1.425412 ACATTCCGAAAACGACTCCG 58.575 50.000 0.00 0.00 42.50 4.63
5627 6930 2.928116 CCTACATTCCGAAAACGACTCC 59.072 50.000 0.00 0.00 0.00 3.85
5628 6931 3.841643 TCCTACATTCCGAAAACGACTC 58.158 45.455 0.00 0.00 0.00 3.36
5629 6932 3.947910 TCCTACATTCCGAAAACGACT 57.052 42.857 0.00 0.00 0.00 4.18
5630 6933 4.240096 TCTTCCTACATTCCGAAAACGAC 58.760 43.478 0.00 0.00 0.00 4.34
5631 6934 4.491676 CTCTTCCTACATTCCGAAAACGA 58.508 43.478 0.00 0.00 0.00 3.85
5632 6935 3.062234 GCTCTTCCTACATTCCGAAAACG 59.938 47.826 0.00 0.00 0.00 3.60
5633 6936 4.093556 CAGCTCTTCCTACATTCCGAAAAC 59.906 45.833 0.00 0.00 0.00 2.43
5634 6937 4.253685 CAGCTCTTCCTACATTCCGAAAA 58.746 43.478 0.00 0.00 0.00 2.29
5635 6938 3.260884 ACAGCTCTTCCTACATTCCGAAA 59.739 43.478 0.00 0.00 0.00 3.46
5636 6939 2.832129 ACAGCTCTTCCTACATTCCGAA 59.168 45.455 0.00 0.00 0.00 4.30
5637 6940 2.457598 ACAGCTCTTCCTACATTCCGA 58.542 47.619 0.00 0.00 0.00 4.55
5638 6941 2.969628 ACAGCTCTTCCTACATTCCG 57.030 50.000 0.00 0.00 0.00 4.30
5639 6942 3.942115 GGAAACAGCTCTTCCTACATTCC 59.058 47.826 14.48 0.00 39.49 3.01
5669 6973 4.979204 CGAAGTACGGCAGGTCAA 57.021 55.556 0.00 0.00 38.46 3.18
5678 6982 3.378339 GAACACCATATCCCGAAGTACG 58.622 50.000 0.00 0.00 42.18 3.67
5679 6983 3.067180 TCGAACACCATATCCCGAAGTAC 59.933 47.826 0.00 0.00 0.00 2.73
5680 6984 3.067180 GTCGAACACCATATCCCGAAGTA 59.933 47.826 0.00 0.00 0.00 2.24
5682 6986 2.100916 AGTCGAACACCATATCCCGAAG 59.899 50.000 0.00 0.00 0.00 3.79
5683 6987 2.104967 AGTCGAACACCATATCCCGAA 58.895 47.619 0.00 0.00 0.00 4.30
5685 6989 1.136305 ACAGTCGAACACCATATCCCG 59.864 52.381 0.00 0.00 0.00 5.14
5700 7004 7.985162 CCTACAAAGGTGAATGACGAACAGTC 61.985 46.154 0.00 0.00 43.01 3.51
5701 7005 3.541632 ACAAAGGTGAATGACGAACAGT 58.458 40.909 0.00 0.00 0.00 3.55
5702 7006 4.152402 CCTACAAAGGTGAATGACGAACAG 59.848 45.833 0.00 0.00 38.19 3.16
5713 7017 1.774894 AAGCGGCCCTACAAAGGTGA 61.775 55.000 0.00 0.00 41.89 4.02
5752 7056 4.332819 CGACATAAAAACACTCTCCATCCC 59.667 45.833 0.00 0.00 0.00 3.85
5944 7297 2.338577 ACTAACCCAGATGCAGATGC 57.661 50.000 0.00 0.00 42.50 3.91
5945 7298 3.384668 CGTACTAACCCAGATGCAGATG 58.615 50.000 0.00 0.00 0.00 2.90
5946 7299 2.365617 CCGTACTAACCCAGATGCAGAT 59.634 50.000 0.00 0.00 0.00 2.90
5947 7300 1.754803 CCGTACTAACCCAGATGCAGA 59.245 52.381 0.00 0.00 0.00 4.26
5975 7328 2.048127 GGACAGCTCGTTTCGCCT 60.048 61.111 0.00 0.00 0.00 5.52
5991 7344 0.041684 AGGATCCAGCCAAAAAGGGG 59.958 55.000 15.82 0.00 38.09 4.79
5994 7352 4.879197 AGAAAAGGATCCAGCCAAAAAG 57.121 40.909 15.82 0.00 0.00 2.27
5998 7356 3.814504 AGAAGAAAAGGATCCAGCCAA 57.185 42.857 15.82 0.00 0.00 4.52
6046 7404 1.020437 TTCTCAACACGTGCATTGCA 58.980 45.000 17.22 7.38 35.60 4.08
6047 7405 2.046313 CTTTCTCAACACGTGCATTGC 58.954 47.619 17.22 0.46 0.00 3.56
6048 7406 3.338818 ACTTTCTCAACACGTGCATTG 57.661 42.857 17.22 13.89 0.00 2.82
6049 7407 4.574828 ACTAACTTTCTCAACACGTGCATT 59.425 37.500 17.22 0.00 0.00 3.56
6050 7408 4.127171 ACTAACTTTCTCAACACGTGCAT 58.873 39.130 17.22 1.22 0.00 3.96
6051 7409 3.527533 ACTAACTTTCTCAACACGTGCA 58.472 40.909 17.22 0.00 0.00 4.57
6052 7410 3.554324 TGACTAACTTTCTCAACACGTGC 59.446 43.478 17.22 0.00 0.00 5.34
6053 7411 5.907197 ATGACTAACTTTCTCAACACGTG 57.093 39.130 15.48 15.48 0.00 4.49
6054 7412 6.982141 TGTTATGACTAACTTTCTCAACACGT 59.018 34.615 0.00 0.00 38.44 4.49
6055 7413 7.402811 TGTTATGACTAACTTTCTCAACACG 57.597 36.000 0.00 0.00 38.44 4.49
6056 7414 9.599322 CATTGTTATGACTAACTTTCTCAACAC 57.401 33.333 0.00 0.00 38.44 3.32
6057 7415 8.289618 GCATTGTTATGACTAACTTTCTCAACA 58.710 33.333 0.00 0.00 38.44 3.33
6058 7416 7.478667 CGCATTGTTATGACTAACTTTCTCAAC 59.521 37.037 0.00 0.00 38.44 3.18
6059 7417 7.386573 TCGCATTGTTATGACTAACTTTCTCAA 59.613 33.333 0.00 0.00 38.44 3.02
6060 7418 6.871492 TCGCATTGTTATGACTAACTTTCTCA 59.129 34.615 0.00 0.00 38.44 3.27
6061 7419 7.290857 TCGCATTGTTATGACTAACTTTCTC 57.709 36.000 0.00 0.00 38.44 2.87
6062 7420 7.549134 TCATCGCATTGTTATGACTAACTTTCT 59.451 33.333 0.00 0.00 38.44 2.52
6063 7421 7.684670 TCATCGCATTGTTATGACTAACTTTC 58.315 34.615 0.00 0.00 38.44 2.62
6064 7422 7.609760 TCATCGCATTGTTATGACTAACTTT 57.390 32.000 0.00 0.00 38.44 2.66
6065 7423 7.792374 ATCATCGCATTGTTATGACTAACTT 57.208 32.000 5.54 0.00 38.44 2.66
6066 7424 7.495606 TGAATCATCGCATTGTTATGACTAACT 59.504 33.333 5.54 0.00 38.44 2.24
6067 7425 7.630026 TGAATCATCGCATTGTTATGACTAAC 58.370 34.615 5.54 0.00 38.17 2.34
6068 7426 7.710475 TCTGAATCATCGCATTGTTATGACTAA 59.290 33.333 5.54 0.00 32.74 2.24
6069 7427 7.169813 GTCTGAATCATCGCATTGTTATGACTA 59.830 37.037 5.54 0.00 32.74 2.59
6070 7428 6.018425 GTCTGAATCATCGCATTGTTATGACT 60.018 38.462 5.54 0.00 32.74 3.41
6071 7429 6.132056 GTCTGAATCATCGCATTGTTATGAC 58.868 40.000 5.54 0.00 32.74 3.06
6072 7430 5.816777 TGTCTGAATCATCGCATTGTTATGA 59.183 36.000 5.80 5.80 33.37 2.15
6073 7431 6.051646 TGTCTGAATCATCGCATTGTTATG 57.948 37.500 0.00 0.00 34.76 1.90
6074 7432 6.682423 TTGTCTGAATCATCGCATTGTTAT 57.318 33.333 0.00 0.00 0.00 1.89
6075 7433 6.093909 ACATTGTCTGAATCATCGCATTGTTA 59.906 34.615 0.00 0.00 0.00 2.41
6076 7434 5.106038 ACATTGTCTGAATCATCGCATTGTT 60.106 36.000 0.00 0.00 0.00 2.83
6077 7435 4.397103 ACATTGTCTGAATCATCGCATTGT 59.603 37.500 0.00 0.00 0.00 2.71
6078 7436 4.916870 ACATTGTCTGAATCATCGCATTG 58.083 39.130 0.00 0.00 0.00 2.82
6079 7437 6.682423 TTACATTGTCTGAATCATCGCATT 57.318 33.333 0.00 0.00 0.00 3.56
6080 7438 6.317140 ACTTTACATTGTCTGAATCATCGCAT 59.683 34.615 0.00 0.00 0.00 4.73
6081 7439 5.643348 ACTTTACATTGTCTGAATCATCGCA 59.357 36.000 0.00 0.00 0.00 5.10
6082 7440 6.111768 ACTTTACATTGTCTGAATCATCGC 57.888 37.500 0.00 0.00 0.00 4.58
6083 7441 8.655970 TGTAACTTTACATTGTCTGAATCATCG 58.344 33.333 0.00 0.00 38.64 3.84
6084 7442 9.760660 GTGTAACTTTACATTGTCTGAATCATC 57.239 33.333 5.16 0.00 44.59 2.92
6085 7443 9.283768 TGTGTAACTTTACATTGTCTGAATCAT 57.716 29.630 5.16 0.00 44.59 2.45
6086 7444 8.669946 TGTGTAACTTTACATTGTCTGAATCA 57.330 30.769 5.16 0.00 44.59 2.57
6089 7447 9.772973 ACTATGTGTAACTTTACATTGTCTGAA 57.227 29.630 5.16 0.00 44.59 3.02
6090 7448 9.772973 AACTATGTGTAACTTTACATTGTCTGA 57.227 29.630 5.16 0.00 44.59 3.27
6098 7456 9.142515 CGTGGATTAACTATGTGTAACTTTACA 57.857 33.333 0.00 0.00 41.06 2.41
6099 7457 9.143631 ACGTGGATTAACTATGTGTAACTTTAC 57.856 33.333 0.00 0.00 38.04 2.01
6100 7458 9.709495 AACGTGGATTAACTATGTGTAACTTTA 57.291 29.630 0.00 0.00 38.04 1.85
6101 7459 8.500773 CAACGTGGATTAACTATGTGTAACTTT 58.499 33.333 0.00 0.00 38.04 2.66
6102 7460 7.360607 GCAACGTGGATTAACTATGTGTAACTT 60.361 37.037 0.00 0.00 38.04 2.66
6103 7461 6.091713 GCAACGTGGATTAACTATGTGTAACT 59.908 38.462 0.00 0.00 38.04 2.24
6104 7462 6.091713 AGCAACGTGGATTAACTATGTGTAAC 59.908 38.462 0.00 0.00 37.35 2.50
6105 7463 6.167685 AGCAACGTGGATTAACTATGTGTAA 58.832 36.000 0.00 0.00 29.86 2.41
6106 7464 5.726397 AGCAACGTGGATTAACTATGTGTA 58.274 37.500 0.00 0.00 29.86 2.90
6107 7465 4.575885 AGCAACGTGGATTAACTATGTGT 58.424 39.130 0.00 0.00 29.86 3.72
6108 7466 6.656314 TTAGCAACGTGGATTAACTATGTG 57.344 37.500 0.00 0.00 29.86 3.21
6109 7467 7.859325 AATTAGCAACGTGGATTAACTATGT 57.141 32.000 0.00 0.00 0.00 2.29
6110 7468 8.822855 TGTAATTAGCAACGTGGATTAACTATG 58.177 33.333 0.00 0.00 0.00 2.23
6111 7469 8.951787 TGTAATTAGCAACGTGGATTAACTAT 57.048 30.769 0.00 0.00 0.00 2.12
6112 7470 8.252417 TCTGTAATTAGCAACGTGGATTAACTA 58.748 33.333 0.00 0.00 0.00 2.24
6113 7471 7.101054 TCTGTAATTAGCAACGTGGATTAACT 58.899 34.615 0.00 0.00 0.00 2.24
6114 7472 7.298507 TCTGTAATTAGCAACGTGGATTAAC 57.701 36.000 0.00 0.00 0.00 2.01
6115 7473 9.256477 CTATCTGTAATTAGCAACGTGGATTAA 57.744 33.333 0.00 0.00 0.00 1.40
6116 7474 8.635328 TCTATCTGTAATTAGCAACGTGGATTA 58.365 33.333 0.00 0.00 0.00 1.75
6117 7475 7.497595 TCTATCTGTAATTAGCAACGTGGATT 58.502 34.615 0.00 0.00 0.00 3.01
6118 7476 7.050970 TCTATCTGTAATTAGCAACGTGGAT 57.949 36.000 0.00 0.00 0.00 3.41
6119 7477 6.459670 TCTATCTGTAATTAGCAACGTGGA 57.540 37.500 0.00 0.00 0.00 4.02
6120 7478 6.978659 TCTTCTATCTGTAATTAGCAACGTGG 59.021 38.462 0.00 0.00 0.00 4.94
6121 7479 7.915923 TCTCTTCTATCTGTAATTAGCAACGTG 59.084 37.037 0.00 0.00 0.00 4.49
6122 7480 7.997482 TCTCTTCTATCTGTAATTAGCAACGT 58.003 34.615 0.00 0.00 0.00 3.99
6123 7481 8.858003 TTCTCTTCTATCTGTAATTAGCAACG 57.142 34.615 0.00 0.00 0.00 4.10
6124 7482 9.255304 CCTTCTCTTCTATCTGTAATTAGCAAC 57.745 37.037 0.00 0.00 0.00 4.17
6125 7483 8.982723 ACCTTCTCTTCTATCTGTAATTAGCAA 58.017 33.333 0.00 0.00 0.00 3.91
6126 7484 8.417106 CACCTTCTCTTCTATCTGTAATTAGCA 58.583 37.037 0.00 0.00 0.00 3.49
6127 7485 8.417884 ACACCTTCTCTTCTATCTGTAATTAGC 58.582 37.037 0.00 0.00 0.00 3.09
6130 7488 8.598041 ACAACACCTTCTCTTCTATCTGTAATT 58.402 33.333 0.00 0.00 0.00 1.40
6131 7489 8.140112 ACAACACCTTCTCTTCTATCTGTAAT 57.860 34.615 0.00 0.00 0.00 1.89
6132 7490 7.540474 ACAACACCTTCTCTTCTATCTGTAA 57.460 36.000 0.00 0.00 0.00 2.41
6133 7491 8.824756 ATACAACACCTTCTCTTCTATCTGTA 57.175 34.615 0.00 0.00 0.00 2.74
6134 7492 7.726033 ATACAACACCTTCTCTTCTATCTGT 57.274 36.000 0.00 0.00 0.00 3.41
6135 7493 8.877779 CAAATACAACACCTTCTCTTCTATCTG 58.122 37.037 0.00 0.00 0.00 2.90
6136 7494 8.816894 TCAAATACAACACCTTCTCTTCTATCT 58.183 33.333 0.00 0.00 0.00 1.98
6137 7495 9.436957 TTCAAATACAACACCTTCTCTTCTATC 57.563 33.333 0.00 0.00 0.00 2.08
6138 7496 9.220767 GTTCAAATACAACACCTTCTCTTCTAT 57.779 33.333 0.00 0.00 0.00 1.98
6139 7497 7.660208 GGTTCAAATACAACACCTTCTCTTCTA 59.340 37.037 0.00 0.00 0.00 2.10
6140 7498 6.486993 GGTTCAAATACAACACCTTCTCTTCT 59.513 38.462 0.00 0.00 0.00 2.85
6141 7499 6.486993 AGGTTCAAATACAACACCTTCTCTTC 59.513 38.462 0.00 0.00 33.89 2.87
6142 7500 6.263168 CAGGTTCAAATACAACACCTTCTCTT 59.737 38.462 0.00 0.00 35.57 2.85
6143 7501 5.765182 CAGGTTCAAATACAACACCTTCTCT 59.235 40.000 0.00 0.00 35.57 3.10
6144 7502 5.763204 TCAGGTTCAAATACAACACCTTCTC 59.237 40.000 0.00 0.00 35.57 2.87
6145 7503 5.690865 TCAGGTTCAAATACAACACCTTCT 58.309 37.500 0.00 0.00 35.57 2.85
6146 7504 6.385649 TTCAGGTTCAAATACAACACCTTC 57.614 37.500 0.00 0.00 35.57 3.46
6147 7505 6.976934 ATTCAGGTTCAAATACAACACCTT 57.023 33.333 0.00 0.00 35.57 3.50
6148 7506 6.738453 GCAATTCAGGTTCAAATACAACACCT 60.738 38.462 0.00 0.00 38.46 4.00
6149 7507 5.405269 GCAATTCAGGTTCAAATACAACACC 59.595 40.000 0.00 0.00 0.00 4.16
6150 7508 6.215845 AGCAATTCAGGTTCAAATACAACAC 58.784 36.000 0.00 0.00 0.00 3.32
6151 7509 6.403866 AGCAATTCAGGTTCAAATACAACA 57.596 33.333 0.00 0.00 0.00 3.33
6152 7510 6.806739 GGTAGCAATTCAGGTTCAAATACAAC 59.193 38.462 0.00 0.00 0.00 3.32
6153 7511 6.348950 CGGTAGCAATTCAGGTTCAAATACAA 60.349 38.462 0.00 0.00 0.00 2.41
6154 7512 5.123186 CGGTAGCAATTCAGGTTCAAATACA 59.877 40.000 0.00 0.00 0.00 2.29
6155 7513 5.353123 TCGGTAGCAATTCAGGTTCAAATAC 59.647 40.000 0.00 0.00 0.00 1.89
6156 7514 5.492895 TCGGTAGCAATTCAGGTTCAAATA 58.507 37.500 0.00 0.00 0.00 1.40
6157 7515 4.331968 TCGGTAGCAATTCAGGTTCAAAT 58.668 39.130 0.00 0.00 0.00 2.32
6158 7516 3.745799 TCGGTAGCAATTCAGGTTCAAA 58.254 40.909 0.00 0.00 0.00 2.69
6159 7517 3.007506 TCTCGGTAGCAATTCAGGTTCAA 59.992 43.478 0.00 0.00 0.00 2.69
6160 7518 2.565391 TCTCGGTAGCAATTCAGGTTCA 59.435 45.455 0.00 0.00 0.00 3.18
6161 7519 3.247006 TCTCGGTAGCAATTCAGGTTC 57.753 47.619 0.00 0.00 0.00 3.62
6162 7520 3.914426 ATCTCGGTAGCAATTCAGGTT 57.086 42.857 0.00 0.00 0.00 3.50
6163 7521 6.859112 ATATATCTCGGTAGCAATTCAGGT 57.141 37.500 0.00 0.00 0.00 4.00
6164 7522 7.869937 CCATATATATCTCGGTAGCAATTCAGG 59.130 40.741 0.00 0.00 0.00 3.86
6165 7523 7.383572 GCCATATATATCTCGGTAGCAATTCAG 59.616 40.741 0.00 0.00 0.00 3.02
6166 7524 7.069950 AGCCATATATATCTCGGTAGCAATTCA 59.930 37.037 0.00 0.00 0.00 2.57
6167 7525 7.437748 AGCCATATATATCTCGGTAGCAATTC 58.562 38.462 0.00 0.00 0.00 2.17
6168 7526 7.366847 AGCCATATATATCTCGGTAGCAATT 57.633 36.000 0.00 0.00 0.00 2.32
6169 7527 6.985653 AGCCATATATATCTCGGTAGCAAT 57.014 37.500 0.00 0.00 0.00 3.56
6170 7528 6.406961 CCAAGCCATATATATCTCGGTAGCAA 60.407 42.308 0.00 0.00 0.00 3.91
6171 7529 5.069119 CCAAGCCATATATATCTCGGTAGCA 59.931 44.000 0.00 0.00 0.00 3.49
6172 7530 5.302059 TCCAAGCCATATATATCTCGGTAGC 59.698 44.000 0.00 0.00 0.00 3.58
6173 7531 6.961360 TCCAAGCCATATATATCTCGGTAG 57.039 41.667 0.00 0.00 0.00 3.18
6174 7532 7.914427 AATCCAAGCCATATATATCTCGGTA 57.086 36.000 0.00 0.00 0.00 4.02
6175 7533 6.814954 AATCCAAGCCATATATATCTCGGT 57.185 37.500 0.00 0.00 0.00 4.69
6176 7534 7.386299 GCTAAATCCAAGCCATATATATCTCGG 59.614 40.741 0.00 0.00 33.73 4.63
6177 7535 8.147058 AGCTAAATCCAAGCCATATATATCTCG 58.853 37.037 0.00 0.00 41.02 4.04
6178 7536 9.487790 GAGCTAAATCCAAGCCATATATATCTC 57.512 37.037 0.00 0.00 41.02 2.75
6179 7537 9.223291 AGAGCTAAATCCAAGCCATATATATCT 57.777 33.333 0.00 0.00 41.02 1.98
6183 7541 8.216423 CCATAGAGCTAAATCCAAGCCATATAT 58.784 37.037 0.00 0.00 41.02 0.86
6184 7542 7.402941 TCCATAGAGCTAAATCCAAGCCATATA 59.597 37.037 0.00 0.00 41.02 0.86
6185 7543 6.216251 TCCATAGAGCTAAATCCAAGCCATAT 59.784 38.462 0.00 0.00 41.02 1.78
6186 7544 5.547666 TCCATAGAGCTAAATCCAAGCCATA 59.452 40.000 0.00 0.00 41.02 2.74
6187 7545 4.352001 TCCATAGAGCTAAATCCAAGCCAT 59.648 41.667 0.00 0.00 41.02 4.40
6188 7546 3.716353 TCCATAGAGCTAAATCCAAGCCA 59.284 43.478 0.00 0.00 41.02 4.75
6189 7547 4.068599 GTCCATAGAGCTAAATCCAAGCC 58.931 47.826 0.00 0.00 41.02 4.35
6190 7548 4.068599 GGTCCATAGAGCTAAATCCAAGC 58.931 47.826 0.00 0.00 40.40 4.01
6191 7549 4.505742 GGGGTCCATAGAGCTAAATCCAAG 60.506 50.000 0.00 0.00 40.49 3.61
6192 7550 3.394606 GGGGTCCATAGAGCTAAATCCAA 59.605 47.826 0.00 0.00 40.49 3.53
6193 7551 2.979678 GGGGTCCATAGAGCTAAATCCA 59.020 50.000 0.00 0.00 40.49 3.41
6194 7552 2.028020 CGGGGTCCATAGAGCTAAATCC 60.028 54.545 0.00 0.00 40.49 3.01
6195 7553 2.897969 TCGGGGTCCATAGAGCTAAATC 59.102 50.000 0.00 0.00 40.49 2.17
6196 7554 2.972348 TCGGGGTCCATAGAGCTAAAT 58.028 47.619 0.00 0.00 40.49 1.40
6197 7555 2.464796 TCGGGGTCCATAGAGCTAAA 57.535 50.000 0.00 0.00 40.49 1.85
6198 7556 2.696526 ATCGGGGTCCATAGAGCTAA 57.303 50.000 0.00 0.00 40.49 3.09
6199 7557 3.820195 TTATCGGGGTCCATAGAGCTA 57.180 47.619 0.00 0.00 40.49 3.32
6200 7558 2.696526 TTATCGGGGTCCATAGAGCT 57.303 50.000 0.00 0.00 40.49 4.09
6201 7559 3.323979 TCTTTTATCGGGGTCCATAGAGC 59.676 47.826 0.00 0.00 39.90 4.09
6202 7560 4.344102 TGTCTTTTATCGGGGTCCATAGAG 59.656 45.833 0.00 0.00 0.00 2.43
6203 7561 4.291792 TGTCTTTTATCGGGGTCCATAGA 58.708 43.478 0.00 0.00 0.00 1.98
6204 7562 4.344102 TCTGTCTTTTATCGGGGTCCATAG 59.656 45.833 0.00 0.00 0.00 2.23
6205 7563 4.291792 TCTGTCTTTTATCGGGGTCCATA 58.708 43.478 0.00 0.00 0.00 2.74
6206 7564 3.112263 TCTGTCTTTTATCGGGGTCCAT 58.888 45.455 0.00 0.00 0.00 3.41
6207 7565 2.542550 TCTGTCTTTTATCGGGGTCCA 58.457 47.619 0.00 0.00 0.00 4.02
6208 7566 3.840124 ATCTGTCTTTTATCGGGGTCC 57.160 47.619 0.00 0.00 0.00 4.46
6209 7567 5.290386 CACTATCTGTCTTTTATCGGGGTC 58.710 45.833 0.00 0.00 0.00 4.46
6210 7568 4.443034 GCACTATCTGTCTTTTATCGGGGT 60.443 45.833 0.00 0.00 0.00 4.95
6211 7569 4.058817 GCACTATCTGTCTTTTATCGGGG 58.941 47.826 0.00 0.00 0.00 5.73
6212 7570 4.693283 TGCACTATCTGTCTTTTATCGGG 58.307 43.478 0.00 0.00 0.00 5.14
6213 7571 6.851222 ATTGCACTATCTGTCTTTTATCGG 57.149 37.500 0.00 0.00 0.00 4.18
6214 7572 8.136057 AGAATTGCACTATCTGTCTTTTATCG 57.864 34.615 0.00 0.00 0.00 2.92
6226 7584 7.087007 TCGTGATGAGATAGAATTGCACTATC 58.913 38.462 12.66 12.66 43.54 2.08
6227 7585 6.986250 TCGTGATGAGATAGAATTGCACTAT 58.014 36.000 0.00 0.00 33.90 2.12
6228 7586 6.391227 TCGTGATGAGATAGAATTGCACTA 57.609 37.500 0.00 0.00 0.00 2.74
6229 7587 5.268118 TCGTGATGAGATAGAATTGCACT 57.732 39.130 0.00 0.00 0.00 4.40
6243 7601 1.550327 AGAGAAGGTGCTCGTGATGA 58.450 50.000 0.00 0.00 39.87 2.92
6244 7602 2.376808 AAGAGAAGGTGCTCGTGATG 57.623 50.000 0.00 0.00 39.87 3.07
6245 7603 2.300152 TGAAAGAGAAGGTGCTCGTGAT 59.700 45.455 0.00 0.00 39.87 3.06
6246 7604 1.686587 TGAAAGAGAAGGTGCTCGTGA 59.313 47.619 0.00 0.00 39.87 4.35
6247 7605 1.795286 GTGAAAGAGAAGGTGCTCGTG 59.205 52.381 0.00 0.00 39.87 4.35
6248 7606 1.270358 GGTGAAAGAGAAGGTGCTCGT 60.270 52.381 0.00 0.00 39.87 4.18
6249 7607 1.270305 TGGTGAAAGAGAAGGTGCTCG 60.270 52.381 0.00 0.00 39.87 5.03
6250 7608 2.550830 TGGTGAAAGAGAAGGTGCTC 57.449 50.000 0.00 0.00 35.11 4.26
6251 7609 2.373169 TCATGGTGAAAGAGAAGGTGCT 59.627 45.455 0.00 0.00 0.00 4.40
6252 7610 2.485814 GTCATGGTGAAAGAGAAGGTGC 59.514 50.000 0.00 0.00 0.00 5.01
6253 7611 3.743521 TGTCATGGTGAAAGAGAAGGTG 58.256 45.455 0.00 0.00 0.00 4.00
6254 7612 3.648067 TCTGTCATGGTGAAAGAGAAGGT 59.352 43.478 0.00 0.00 35.89 3.50
6255 7613 4.277515 TCTGTCATGGTGAAAGAGAAGG 57.722 45.455 0.00 0.00 35.89 3.46
6256 7614 5.350914 GTGATCTGTCATGGTGAAAGAGAAG 59.649 44.000 6.07 0.00 43.43 2.85
6257 7615 5.221702 TGTGATCTGTCATGGTGAAAGAGAA 60.222 40.000 6.07 0.00 43.43 2.87
6258 7616 4.284234 TGTGATCTGTCATGGTGAAAGAGA 59.716 41.667 6.07 0.00 43.43 3.10
6259 7617 4.391216 GTGTGATCTGTCATGGTGAAAGAG 59.609 45.833 6.07 0.00 43.43 2.85
6260 7618 4.202346 TGTGTGATCTGTCATGGTGAAAGA 60.202 41.667 2.53 2.53 44.23 2.52
6261 7619 4.067192 TGTGTGATCTGTCATGGTGAAAG 58.933 43.478 0.00 0.00 36.60 2.62
6262 7620 4.084011 TGTGTGATCTGTCATGGTGAAA 57.916 40.909 0.00 0.00 36.60 2.69
6263 7621 3.767902 TGTGTGATCTGTCATGGTGAA 57.232 42.857 0.00 0.00 36.60 3.18
6264 7622 3.071457 AGTTGTGTGATCTGTCATGGTGA 59.929 43.478 0.00 0.00 36.60 4.02
6265 7623 3.405831 AGTTGTGTGATCTGTCATGGTG 58.594 45.455 0.00 0.00 36.60 4.17
6266 7624 3.326006 AGAGTTGTGTGATCTGTCATGGT 59.674 43.478 0.00 0.00 36.60 3.55
6267 7625 3.935315 AGAGTTGTGTGATCTGTCATGG 58.065 45.455 0.00 0.00 36.60 3.66
6268 7626 7.548427 AGAAATAGAGTTGTGTGATCTGTCATG 59.452 37.037 0.00 0.00 36.60 3.07
6269 7627 7.619050 AGAAATAGAGTTGTGTGATCTGTCAT 58.381 34.615 0.00 0.00 36.60 3.06
6270 7628 6.997655 AGAAATAGAGTTGTGTGATCTGTCA 58.002 36.000 0.00 0.00 0.00 3.58
6271 7629 7.600375 TGAAGAAATAGAGTTGTGTGATCTGTC 59.400 37.037 0.00 0.00 0.00 3.51
6272 7630 7.445121 TGAAGAAATAGAGTTGTGTGATCTGT 58.555 34.615 0.00 0.00 0.00 3.41
6273 7631 7.895975 TGAAGAAATAGAGTTGTGTGATCTG 57.104 36.000 0.00 0.00 0.00 2.90
6274 7632 8.908786 TTTGAAGAAATAGAGTTGTGTGATCT 57.091 30.769 0.00 0.00 0.00 2.75
6275 7633 9.387123 GTTTTGAAGAAATAGAGTTGTGTGATC 57.613 33.333 0.00 0.00 0.00 2.92
6276 7634 8.352942 GGTTTTGAAGAAATAGAGTTGTGTGAT 58.647 33.333 0.00 0.00 0.00 3.06
6277 7635 7.201785 GGGTTTTGAAGAAATAGAGTTGTGTGA 60.202 37.037 0.00 0.00 0.00 3.58
6278 7636 6.918022 GGGTTTTGAAGAAATAGAGTTGTGTG 59.082 38.462 0.00 0.00 0.00 3.82
6279 7637 6.605594 TGGGTTTTGAAGAAATAGAGTTGTGT 59.394 34.615 0.00 0.00 0.00 3.72
6280 7638 7.038154 TGGGTTTTGAAGAAATAGAGTTGTG 57.962 36.000 0.00 0.00 0.00 3.33
6281 7639 7.839680 ATGGGTTTTGAAGAAATAGAGTTGT 57.160 32.000 0.00 0.00 0.00 3.32
6282 7640 9.014297 ACTATGGGTTTTGAAGAAATAGAGTTG 57.986 33.333 0.00 0.00 0.00 3.16
6288 7646 9.158233 CGTCTTACTATGGGTTTTGAAGAAATA 57.842 33.333 0.00 0.00 0.00 1.40
6289 7647 7.664318 ACGTCTTACTATGGGTTTTGAAGAAAT 59.336 33.333 0.00 0.00 0.00 2.17
6290 7648 6.993902 ACGTCTTACTATGGGTTTTGAAGAAA 59.006 34.615 0.00 0.00 0.00 2.52
6291 7649 6.425721 CACGTCTTACTATGGGTTTTGAAGAA 59.574 38.462 0.00 0.00 0.00 2.52
6292 7650 5.929992 CACGTCTTACTATGGGTTTTGAAGA 59.070 40.000 0.00 0.00 0.00 2.87
6293 7651 5.699458 ACACGTCTTACTATGGGTTTTGAAG 59.301 40.000 0.00 0.00 0.00 3.02
6294 7652 5.613329 ACACGTCTTACTATGGGTTTTGAA 58.387 37.500 0.00 0.00 0.00 2.69
6295 7653 5.217978 ACACGTCTTACTATGGGTTTTGA 57.782 39.130 0.00 0.00 0.00 2.69
6296 7654 6.392354 TCTACACGTCTTACTATGGGTTTTG 58.608 40.000 0.00 0.00 0.00 2.44
6297 7655 6.594788 TCTACACGTCTTACTATGGGTTTT 57.405 37.500 0.00 0.00 0.00 2.43
6298 7656 6.015180 TGTTCTACACGTCTTACTATGGGTTT 60.015 38.462 0.00 0.00 0.00 3.27
6299 7657 5.477984 TGTTCTACACGTCTTACTATGGGTT 59.522 40.000 0.00 0.00 0.00 4.11
6300 7658 5.012239 TGTTCTACACGTCTTACTATGGGT 58.988 41.667 0.00 0.00 0.00 4.51
6301 7659 5.571784 TGTTCTACACGTCTTACTATGGG 57.428 43.478 0.00 0.00 0.00 4.00
6302 7660 6.530534 CCTTTGTTCTACACGTCTTACTATGG 59.469 42.308 0.00 0.00 0.00 2.74
6303 7661 7.088905 ACCTTTGTTCTACACGTCTTACTATG 58.911 38.462 0.00 0.00 0.00 2.23
6304 7662 7.176340 AGACCTTTGTTCTACACGTCTTACTAT 59.824 37.037 0.00 0.00 29.86 2.12
6305 7663 6.488006 AGACCTTTGTTCTACACGTCTTACTA 59.512 38.462 0.00 0.00 29.86 1.82
6306 7664 5.301298 AGACCTTTGTTCTACACGTCTTACT 59.699 40.000 0.00 0.00 29.86 2.24
6307 7665 5.527033 AGACCTTTGTTCTACACGTCTTAC 58.473 41.667 0.00 0.00 29.86 2.34
6308 7666 5.779529 AGACCTTTGTTCTACACGTCTTA 57.220 39.130 0.00 0.00 29.86 2.10
6309 7667 4.667519 AGACCTTTGTTCTACACGTCTT 57.332 40.909 0.00 0.00 29.86 3.01
6310 7668 4.098960 TGAAGACCTTTGTTCTACACGTCT 59.901 41.667 0.00 0.00 33.31 4.18
6311 7669 4.365723 TGAAGACCTTTGTTCTACACGTC 58.634 43.478 0.00 0.00 0.00 4.34
6312 7670 4.395959 TGAAGACCTTTGTTCTACACGT 57.604 40.909 0.00 0.00 0.00 4.49
6313 7671 5.047847 TCTTGAAGACCTTTGTTCTACACG 58.952 41.667 0.00 0.00 0.00 4.49
6314 7672 8.088981 TCTATCTTGAAGACCTTTGTTCTACAC 58.911 37.037 0.00 0.00 0.00 2.90
6315 7673 8.190326 TCTATCTTGAAGACCTTTGTTCTACA 57.810 34.615 0.00 0.00 0.00 2.74
6316 7674 7.276878 GCTCTATCTTGAAGACCTTTGTTCTAC 59.723 40.741 0.00 0.00 0.00 2.59
6317 7675 7.039011 TGCTCTATCTTGAAGACCTTTGTTCTA 60.039 37.037 0.00 0.00 0.00 2.10
6318 7676 6.169800 GCTCTATCTTGAAGACCTTTGTTCT 58.830 40.000 0.00 0.00 0.00 3.01
6319 7677 5.934625 TGCTCTATCTTGAAGACCTTTGTTC 59.065 40.000 0.00 0.00 0.00 3.18
6320 7678 5.869579 TGCTCTATCTTGAAGACCTTTGTT 58.130 37.500 0.00 0.00 0.00 2.83
6321 7679 5.489792 TGCTCTATCTTGAAGACCTTTGT 57.510 39.130 0.00 0.00 0.00 2.83
6322 7680 6.205464 TGTTTGCTCTATCTTGAAGACCTTTG 59.795 38.462 0.00 0.00 0.00 2.77
6323 7681 6.299141 TGTTTGCTCTATCTTGAAGACCTTT 58.701 36.000 0.00 0.00 0.00 3.11
6324 7682 5.869579 TGTTTGCTCTATCTTGAAGACCTT 58.130 37.500 0.00 0.00 0.00 3.50
6325 7683 5.489792 TGTTTGCTCTATCTTGAAGACCT 57.510 39.130 0.00 0.00 0.00 3.85
6326 7684 6.348868 CCTTTGTTTGCTCTATCTTGAAGACC 60.349 42.308 0.00 0.00 0.00 3.85
6327 7685 6.428159 TCCTTTGTTTGCTCTATCTTGAAGAC 59.572 38.462 0.00 0.00 0.00 3.01
6328 7686 6.428159 GTCCTTTGTTTGCTCTATCTTGAAGA 59.572 38.462 0.00 0.00 0.00 2.87
6329 7687 6.429385 AGTCCTTTGTTTGCTCTATCTTGAAG 59.571 38.462 0.00 0.00 0.00 3.02
6330 7688 6.299141 AGTCCTTTGTTTGCTCTATCTTGAA 58.701 36.000 0.00 0.00 0.00 2.69
6331 7689 5.869579 AGTCCTTTGTTTGCTCTATCTTGA 58.130 37.500 0.00 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.