Multiple sequence alignment - TraesCS3D01G393600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G393600 chr3D 100.000 4837 0 0 1 4837 508561362 508556526 0.000000e+00 8933.0
1 TraesCS3D01G393600 chr3D 75.621 845 127 37 3696 4507 508470318 508469520 3.580000e-91 346.0
2 TraesCS3D01G393600 chr3D 79.897 388 55 17 3996 4378 508550608 508550239 3.710000e-66 263.0
3 TraesCS3D01G393600 chr3D 94.000 50 3 0 694 743 457399325 457399374 5.190000e-10 76.8
4 TraesCS3D01G393600 chr3B 93.959 1854 60 20 2539 4358 671569809 671567974 0.000000e+00 2756.0
5 TraesCS3D01G393600 chr3B 92.830 1590 103 7 1626 3212 671670421 671668840 0.000000e+00 2294.0
6 TraesCS3D01G393600 chr3B 95.991 923 33 3 1626 2547 671572934 671572015 0.000000e+00 1496.0
7 TraesCS3D01G393600 chr3B 91.667 576 38 4 4 570 671672408 671671834 0.000000e+00 789.0
8 TraesCS3D01G393600 chr3B 93.220 413 24 3 958 1367 671573342 671572931 5.350000e-169 604.0
9 TraesCS3D01G393600 chr3B 90.338 414 30 8 959 1367 671670826 671670418 7.130000e-148 534.0
10 TraesCS3D01G393600 chr3B 81.435 641 82 24 3964 4594 671664529 671663916 1.560000e-134 490.0
11 TraesCS3D01G393600 chr3B 85.867 467 52 6 2043 2509 671575748 671575296 7.280000e-133 484.0
12 TraesCS3D01G393600 chr3B 87.213 305 30 5 3261 3563 671668824 671668527 6.000000e-89 339.0
13 TraesCS3D01G393600 chr3B 81.099 455 52 20 117 569 671574176 671573754 2.790000e-87 333.0
14 TraesCS3D01G393600 chr3B 76.795 599 92 28 3930 4510 671668339 671667770 4.740000e-75 292.0
15 TraesCS3D01G393600 chr3B 88.119 202 15 6 768 960 671671071 671670870 1.050000e-56 231.0
16 TraesCS3D01G393600 chr3B 86.957 184 21 3 6 186 671672856 671672673 2.280000e-48 204.0
17 TraesCS3D01G393600 chr3B 87.429 175 8 4 593 758 671671290 671671121 6.390000e-44 189.0
18 TraesCS3D01G393600 chr3B 87.413 143 15 3 3713 3855 671668520 671668381 1.390000e-35 161.0
19 TraesCS3D01G393600 chr3B 86.517 89 4 6 1546 1630 34527424 34527340 1.850000e-14 91.6
20 TraesCS3D01G393600 chr3B 85.393 89 5 6 1546 1630 35569053 35569137 8.630000e-13 86.1
21 TraesCS3D01G393600 chr3B 85.393 89 5 6 1546 1630 35635711 35635795 8.630000e-13 86.1
22 TraesCS3D01G393600 chr3B 94.000 50 3 0 694 743 604770275 604770324 5.190000e-10 76.8
23 TraesCS3D01G393600 chr3B 77.536 138 15 7 614 743 604771094 604771223 8.690000e-08 69.4
24 TraesCS3D01G393600 chr3B 90.741 54 0 4 543 593 671671837 671671786 3.120000e-07 67.6
25 TraesCS3D01G393600 chr3A 90.591 1945 162 14 1626 3563 646504437 646502507 0.000000e+00 2558.0
26 TraesCS3D01G393600 chr3A 90.545 1946 160 15 1626 3563 646529515 646527586 0.000000e+00 2553.0
27 TraesCS3D01G393600 chr3A 90.391 1946 165 15 1626 3563 646463583 646461652 0.000000e+00 2538.0
28 TraesCS3D01G393600 chr3A 92.115 1598 101 14 1629 3212 646559731 646558145 0.000000e+00 2230.0
29 TraesCS3D01G393600 chr3A 94.972 1233 50 6 2387 3618 646459886 646458665 0.000000e+00 1923.0
30 TraesCS3D01G393600 chr3A 95.585 974 34 3 3632 4605 646311368 646310404 0.000000e+00 1552.0
31 TraesCS3D01G393600 chr3A 91.275 596 32 6 3 580 646561145 646560552 0.000000e+00 795.0
32 TraesCS3D01G393600 chr3A 83.750 640 73 18 3971 4605 646498432 646497819 1.170000e-160 577.0
33 TraesCS3D01G393600 chr3A 82.143 644 85 17 3967 4605 646523897 646523279 4.290000e-145 525.0
34 TraesCS3D01G393600 chr3A 89.423 416 36 7 958 1367 646560151 646559738 7.180000e-143 518.0
35 TraesCS3D01G393600 chr3A 81.395 645 89 18 3967 4605 646554165 646553546 9.350000e-137 497.0
36 TraesCS3D01G393600 chr3A 87.989 358 32 9 614 960 646505216 646504859 3.480000e-111 412.0
37 TraesCS3D01G393600 chr3A 85.266 414 30 12 958 1367 646463966 646463580 9.750000e-107 398.0
38 TraesCS3D01G393600 chr3A 85.266 414 30 12 958 1367 646529898 646529512 9.750000e-107 398.0
39 TraesCS3D01G393600 chr3A 83.575 414 35 14 958 1367 646504818 646504434 1.660000e-94 357.0
40 TraesCS3D01G393600 chr3A 87.055 309 32 5 3261 3563 646558129 646557823 4.640000e-90 342.0
41 TraesCS3D01G393600 chr3A 82.482 411 40 19 161 569 646505606 646505226 1.000000e-86 331.0
42 TraesCS3D01G393600 chr3A 92.000 225 18 0 2286 2510 646466117 646465893 2.810000e-82 316.0
43 TraesCS3D01G393600 chr3A 80.654 367 41 17 614 960 646560550 646560194 1.730000e-64 257.0
44 TraesCS3D01G393600 chr3A 78.673 422 63 19 3930 4349 646461464 646461068 6.210000e-64 255.0
45 TraesCS3D01G393600 chr3A 76.749 486 76 23 3996 4468 646518982 646518521 2.250000e-58 237.0
46 TraesCS3D01G393600 chr3A 78.667 375 57 17 4011 4378 646295791 646295433 1.350000e-55 228.0
47 TraesCS3D01G393600 chr3A 77.594 424 57 22 3930 4349 646557636 646557247 6.300000e-54 222.0
48 TraesCS3D01G393600 chr3A 81.625 283 34 8 289 569 646464646 646464380 8.150000e-53 219.0
49 TraesCS3D01G393600 chr3A 81.625 283 34 8 289 569 646530578 646530312 8.150000e-53 219.0
50 TraesCS3D01G393600 chr3A 77.994 359 55 16 3996 4350 646549218 646548880 2.280000e-48 204.0
51 TraesCS3D01G393600 chr3A 89.922 129 11 2 3713 3841 646461645 646461519 1.080000e-36 165.0
52 TraesCS3D01G393600 chr3A 87.413 143 15 3 3713 3855 646557816 646557677 1.390000e-35 161.0
53 TraesCS3D01G393600 chr3A 89.147 129 13 1 3713 3841 646502500 646502373 5.010000e-35 159.0
54 TraesCS3D01G393600 chr3A 95.652 46 2 0 698 743 600312904 600312949 1.870000e-09 75.0
55 TraesCS3D01G393600 chr3A 93.182 44 2 1 700 743 600085554 600085596 4.040000e-06 63.9
56 TraesCS3D01G393600 chr3A 100.000 29 0 0 3671 3699 554338634 554338662 2.000000e-03 54.7
57 TraesCS3D01G393600 chr6D 91.228 171 14 1 4668 4837 38568938 38569108 1.050000e-56 231.0
58 TraesCS3D01G393600 chr6D 83.654 104 12 4 1527 1627 336354237 336354136 5.150000e-15 93.5
59 TraesCS3D01G393600 chr6D 100.000 41 0 0 4606 4646 38568795 38568835 5.190000e-10 76.8
60 TraesCS3D01G393600 chr2D 89.535 172 16 2 4668 4837 639130777 639130948 2.930000e-52 217.0
61 TraesCS3D01G393600 chr2D 95.833 48 0 2 4601 4646 639130627 639130674 5.190000e-10 76.8
62 TraesCS3D01G393600 chr1A 89.535 172 16 2 4668 4837 501033992 501033821 2.930000e-52 217.0
63 TraesCS3D01G393600 chr7D 87.121 132 14 3 4677 4805 618055329 618055198 3.900000e-31 147.0
64 TraesCS3D01G393600 chr1B 93.939 66 4 0 3632 3697 453340714 453340779 3.080000e-17 100.0
65 TraesCS3D01G393600 chr1B 94.872 39 1 1 4608 4646 598387946 598387909 5.230000e-05 60.2
66 TraesCS3D01G393600 chr4B 84.848 99 11 3 1529 1627 370908489 370908395 3.980000e-16 97.1
67 TraesCS3D01G393600 chr4B 87.356 87 3 6 1545 1626 629770353 629770436 5.150000e-15 93.5
68 TraesCS3D01G393600 chr1D 92.424 66 5 0 3632 3697 338872411 338872476 1.430000e-15 95.3
69 TraesCS3D01G393600 chr1D 94.595 37 1 1 3664 3699 395857964 395857928 6.760000e-04 56.5
70 TraesCS3D01G393600 chr6B 84.694 98 8 5 1532 1627 175324470 175324378 1.850000e-14 91.6
71 TraesCS3D01G393600 chr5D 86.517 89 5 4 1547 1631 356666817 356666732 1.850000e-14 91.6
72 TraesCS3D01G393600 chr5B 90.909 66 6 0 3632 3697 381035374 381035309 6.670000e-14 89.8
73 TraesCS3D01G393600 chr5B 97.059 34 1 0 3664 3697 182608869 182608902 1.880000e-04 58.4
74 TraesCS3D01G393600 chr7A 96.226 53 2 0 3632 3684 279180119 279180171 2.400000e-13 87.9
75 TraesCS3D01G393600 chr4A 86.747 83 6 4 1547 1627 182478648 182478727 2.400000e-13 87.9
76 TraesCS3D01G393600 chr4A 100.000 28 0 0 3672 3699 714743790 714743817 9.000000e-03 52.8
77 TraesCS3D01G393600 chrUn 100.000 41 0 0 4606 4646 102028720 102028680 5.190000e-10 76.8
78 TraesCS3D01G393600 chrUn 100.000 39 0 0 4608 4646 40975246 40975284 6.720000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G393600 chr3D 508556526 508561362 4836 True 8933.000000 8933 100.000000 1 4837 1 chr3D.!!$R3 4836
1 TraesCS3D01G393600 chr3D 508469520 508470318 798 True 346.000000 346 75.621000 3696 4507 1 chr3D.!!$R1 811
2 TraesCS3D01G393600 chr3B 671567974 671575748 7774 True 1134.600000 2756 90.027200 117 4358 5 chr3B.!!$R2 4241
3 TraesCS3D01G393600 chr3B 671663916 671672856 8940 True 508.236364 2294 87.357909 4 4594 11 chr3B.!!$R3 4590
4 TraesCS3D01G393600 chr3A 646310404 646311368 964 True 1552.000000 1552 95.585000 3632 4605 1 chr3A.!!$R2 973
5 TraesCS3D01G393600 chr3A 646523279 646530578 7299 True 923.750000 2553 84.894750 289 4605 4 chr3A.!!$R7 4316
6 TraesCS3D01G393600 chr3A 646458665 646466117 7452 True 830.571429 2538 87.549857 289 4349 7 chr3A.!!$R5 4060
7 TraesCS3D01G393600 chr3A 646497819 646505606 7787 True 732.333333 2558 86.255667 161 4605 6 chr3A.!!$R6 4444
8 TraesCS3D01G393600 chr3A 646553546 646561145 7599 True 627.750000 2230 85.865500 3 4605 8 chr3A.!!$R8 4602

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
979 3117 0.108567 GAGTCCCGCTTCCTCTGAAC 60.109 60.0 0.00 0.0 0.0 3.18 F
1414 3561 0.032615 AGTGAGAGTAGGGCCTGGAG 60.033 60.0 18.53 0.0 0.0 3.86 F
1493 3640 0.033405 AGGGAGGCGAGTAGTTAGCA 60.033 55.0 0.00 0.0 0.0 3.49 F
2312 4477 0.519519 TGCCTTTTGTATTGACGCGG 59.480 50.0 12.47 0.0 0.0 6.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2223 4388 4.739735 CTCCCGAAGAGAGAGACTAGTCTC 60.740 54.167 35.86 35.86 46.50 3.36 R
3290 7685 1.076485 GCTGTGGCCCAAGGATGAT 60.076 57.895 0.00 0.00 0.00 2.45 R
3296 7691 2.113774 TGTGAGCTGTGGCCCAAG 59.886 61.111 0.00 0.00 39.73 3.61 R
4082 8531 0.038618 ACATGAACAGAGCGTACGCA 60.039 50.000 38.58 19.16 44.88 5.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
136 1593 2.680352 TCCCTCCCTGCTCGACAC 60.680 66.667 0.00 0.00 0.00 3.67
139 1596 3.374402 CTCCCTGCTCGACACCGT 61.374 66.667 0.00 0.00 37.05 4.83
576 2587 9.975218 AGTTATCAAACTGGACTTATATTTGGT 57.025 29.630 0.00 0.00 44.40 3.67
579 2590 7.921786 TCAAACTGGACTTATATTTGGTCTG 57.078 36.000 0.00 0.00 32.36 3.51
580 2591 7.458397 TCAAACTGGACTTATATTTGGTCTGT 58.542 34.615 0.00 0.00 32.36 3.41
581 2592 7.390440 TCAAACTGGACTTATATTTGGTCTGTG 59.610 37.037 0.00 0.00 32.36 3.66
582 2593 6.374417 ACTGGACTTATATTTGGTCTGTGT 57.626 37.500 0.00 0.00 0.00 3.72
583 2594 7.490657 ACTGGACTTATATTTGGTCTGTGTA 57.509 36.000 0.00 0.00 0.00 2.90
584 2595 8.090788 ACTGGACTTATATTTGGTCTGTGTAT 57.909 34.615 0.00 0.00 0.00 2.29
585 2596 8.204836 ACTGGACTTATATTTGGTCTGTGTATC 58.795 37.037 0.00 0.00 0.00 2.24
586 2597 8.319057 TGGACTTATATTTGGTCTGTGTATCT 57.681 34.615 0.00 0.00 0.00 1.98
587 2598 8.768397 TGGACTTATATTTGGTCTGTGTATCTT 58.232 33.333 0.00 0.00 0.00 2.40
588 2599 9.262358 GGACTTATATTTGGTCTGTGTATCTTC 57.738 37.037 0.00 0.00 0.00 2.87
605 2616 7.175990 GTGTATCTTCTTATAGCAGTAGAGCCT 59.824 40.741 0.00 0.00 34.23 4.58
606 2617 6.588719 ATCTTCTTATAGCAGTAGAGCCTG 57.411 41.667 0.00 0.00 35.49 4.85
607 2618 5.696030 TCTTCTTATAGCAGTAGAGCCTGA 58.304 41.667 0.00 0.00 34.23 3.86
608 2619 5.533154 TCTTCTTATAGCAGTAGAGCCTGAC 59.467 44.000 0.00 0.00 34.23 3.51
609 2620 4.793201 TCTTATAGCAGTAGAGCCTGACA 58.207 43.478 0.00 0.00 34.23 3.58
612 2623 0.829333 AGCAGTAGAGCCTGACATGG 59.171 55.000 0.00 0.00 34.23 3.66
734 2764 1.475682 GCTGCCTCCATTTTCAGAAGG 59.524 52.381 0.00 0.00 0.00 3.46
743 2774 4.065088 CCATTTTCAGAAGGTTCACGAGA 58.935 43.478 0.00 0.00 0.00 4.04
807 2888 9.698309 CGTCTCTATAGGATGTGAATTTACAAT 57.302 33.333 7.18 0.00 33.69 2.71
870 2960 5.841810 AGCTGAACTGCTACTAGATGAATC 58.158 41.667 0.00 0.00 42.10 2.52
882 2972 6.656632 ACTAGATGAATCGCAATCTTCCTA 57.343 37.500 0.00 0.00 0.00 2.94
979 3117 0.108567 GAGTCCCGCTTCCTCTGAAC 60.109 60.000 0.00 0.00 0.00 3.18
984 3122 1.544825 CCGCTTCCTCTGAACCTCCA 61.545 60.000 0.00 0.00 0.00 3.86
1036 3174 2.920912 TCGCTTTCCCTCCCGTGT 60.921 61.111 0.00 0.00 0.00 4.49
1042 3180 1.167781 TTTCCCTCCCGTGTTTTCGC 61.168 55.000 0.00 0.00 0.00 4.70
1086 3224 3.830755 GGCATGCCATTCTTATCCTTGAT 59.169 43.478 32.08 0.00 35.81 2.57
1217 3356 3.068165 CCCAGTTGGAGGTGAACTTTTTC 59.932 47.826 0.00 0.00 37.39 2.29
1227 3370 2.035961 GTGAACTTTTTCCTTGCCCCTC 59.964 50.000 0.00 0.00 0.00 4.30
1280 3426 6.042552 TGTTTGGACAATTGGTTTATCCATGT 59.957 34.615 13.72 0.00 40.76 3.21
1363 3510 3.472652 GTGAACATGTTGTCTGTGGGTA 58.527 45.455 17.58 0.00 0.00 3.69
1364 3511 3.880490 GTGAACATGTTGTCTGTGGGTAA 59.120 43.478 17.58 0.00 0.00 2.85
1365 3512 4.024048 GTGAACATGTTGTCTGTGGGTAAG 60.024 45.833 17.58 0.00 0.00 2.34
1366 3513 4.141597 TGAACATGTTGTCTGTGGGTAAGA 60.142 41.667 17.58 0.00 0.00 2.10
1367 3514 3.740115 ACATGTTGTCTGTGGGTAAGAC 58.260 45.455 0.00 0.00 43.62 3.01
1368 3515 2.922740 TGTTGTCTGTGGGTAAGACC 57.077 50.000 1.40 0.00 42.85 3.85
1369 3516 2.120312 TGTTGTCTGTGGGTAAGACCA 58.880 47.619 0.00 0.00 42.85 4.02
1377 3524 2.666272 TGGGTAAGACCACATGCAAA 57.334 45.000 0.00 0.00 41.02 3.68
1378 3525 3.168035 TGGGTAAGACCACATGCAAAT 57.832 42.857 0.00 0.00 41.02 2.32
1379 3526 3.505386 TGGGTAAGACCACATGCAAATT 58.495 40.909 0.00 0.00 41.02 1.82
1380 3527 3.509575 TGGGTAAGACCACATGCAAATTC 59.490 43.478 0.00 0.00 41.02 2.17
1381 3528 3.763897 GGGTAAGACCACATGCAAATTCT 59.236 43.478 0.00 0.00 41.02 2.40
1382 3529 4.947388 GGGTAAGACCACATGCAAATTCTA 59.053 41.667 0.00 0.00 41.02 2.10
1383 3530 5.163652 GGGTAAGACCACATGCAAATTCTAC 60.164 44.000 0.00 0.00 41.02 2.59
1384 3531 5.414454 GGTAAGACCACATGCAAATTCTACA 59.586 40.000 0.00 0.00 38.42 2.74
1385 3532 5.376854 AAGACCACATGCAAATTCTACAC 57.623 39.130 0.00 0.00 0.00 2.90
1386 3533 3.758554 AGACCACATGCAAATTCTACACC 59.241 43.478 0.00 0.00 0.00 4.16
1387 3534 3.495331 ACCACATGCAAATTCTACACCA 58.505 40.909 0.00 0.00 0.00 4.17
1388 3535 3.255642 ACCACATGCAAATTCTACACCAC 59.744 43.478 0.00 0.00 0.00 4.16
1389 3536 3.255395 CCACATGCAAATTCTACACCACA 59.745 43.478 0.00 0.00 0.00 4.17
1390 3537 4.082081 CCACATGCAAATTCTACACCACAT 60.082 41.667 0.00 0.00 0.00 3.21
1391 3538 5.472148 CACATGCAAATTCTACACCACATT 58.528 37.500 0.00 0.00 0.00 2.71
1392 3539 5.346551 CACATGCAAATTCTACACCACATTG 59.653 40.000 0.00 0.00 0.00 2.82
1393 3540 3.911868 TGCAAATTCTACACCACATTGC 58.088 40.909 0.00 0.00 41.39 3.56
1394 3541 2.916716 GCAAATTCTACACCACATTGCG 59.083 45.455 0.00 0.00 33.35 4.85
1395 3542 3.365868 GCAAATTCTACACCACATTGCGA 60.366 43.478 0.00 0.00 33.35 5.10
1396 3543 4.406069 CAAATTCTACACCACATTGCGAG 58.594 43.478 0.00 0.00 0.00 5.03
1397 3544 2.831685 TTCTACACCACATTGCGAGT 57.168 45.000 0.00 0.00 0.00 4.18
1398 3545 2.078849 TCTACACCACATTGCGAGTG 57.921 50.000 0.00 0.00 36.76 3.51
1399 3546 1.616374 TCTACACCACATTGCGAGTGA 59.384 47.619 7.94 0.00 39.30 3.41
1400 3547 1.995484 CTACACCACATTGCGAGTGAG 59.005 52.381 7.94 0.75 39.30 3.51
1401 3548 0.392706 ACACCACATTGCGAGTGAGA 59.607 50.000 7.94 0.00 39.30 3.27
1402 3549 1.073964 CACCACATTGCGAGTGAGAG 58.926 55.000 4.76 0.00 39.30 3.20
1403 3550 0.681733 ACCACATTGCGAGTGAGAGT 59.318 50.000 4.76 0.00 39.30 3.24
1404 3551 1.893137 ACCACATTGCGAGTGAGAGTA 59.107 47.619 4.76 0.00 39.30 2.59
1405 3552 2.094494 ACCACATTGCGAGTGAGAGTAG 60.094 50.000 4.76 0.00 39.30 2.57
1406 3553 2.534298 CACATTGCGAGTGAGAGTAGG 58.466 52.381 0.00 0.00 39.30 3.18
1407 3554 1.478510 ACATTGCGAGTGAGAGTAGGG 59.521 52.381 0.00 0.00 0.00 3.53
1408 3555 0.461961 ATTGCGAGTGAGAGTAGGGC 59.538 55.000 0.00 0.00 0.00 5.19
1409 3556 1.605058 TTGCGAGTGAGAGTAGGGCC 61.605 60.000 0.00 0.00 0.00 5.80
1410 3557 1.755008 GCGAGTGAGAGTAGGGCCT 60.755 63.158 12.58 12.58 0.00 5.19
1411 3558 2.010582 GCGAGTGAGAGTAGGGCCTG 62.011 65.000 18.53 0.00 0.00 4.85
1412 3559 1.388065 CGAGTGAGAGTAGGGCCTGG 61.388 65.000 18.53 0.00 0.00 4.45
1413 3560 0.033011 GAGTGAGAGTAGGGCCTGGA 60.033 60.000 18.53 0.00 0.00 3.86
1414 3561 0.032615 AGTGAGAGTAGGGCCTGGAG 60.033 60.000 18.53 0.00 0.00 3.86
1415 3562 1.045911 GTGAGAGTAGGGCCTGGAGG 61.046 65.000 18.53 0.00 38.53 4.30
1416 3563 1.458588 GAGAGTAGGGCCTGGAGGG 60.459 68.421 18.53 0.00 35.18 4.30
1426 3573 3.655211 CTGGAGGGCAGCAGGGTT 61.655 66.667 0.00 0.00 0.00 4.11
1427 3574 3.933048 CTGGAGGGCAGCAGGGTTG 62.933 68.421 0.00 0.00 0.00 3.77
1436 3583 4.792106 GCAGGGTTGCTAAATGCG 57.208 55.556 0.00 0.00 46.95 4.73
1437 3584 1.883021 GCAGGGTTGCTAAATGCGT 59.117 52.632 0.00 0.00 46.95 5.24
1438 3585 0.179163 GCAGGGTTGCTAAATGCGTC 60.179 55.000 0.00 0.00 46.95 5.19
1439 3586 1.164411 CAGGGTTGCTAAATGCGTCA 58.836 50.000 0.00 0.00 46.63 4.35
1440 3587 1.745087 CAGGGTTGCTAAATGCGTCAT 59.255 47.619 0.00 0.00 46.63 3.06
1441 3588 2.017049 AGGGTTGCTAAATGCGTCATC 58.983 47.619 0.00 0.00 46.63 2.92
1442 3589 2.017049 GGGTTGCTAAATGCGTCATCT 58.983 47.619 0.00 0.00 46.63 2.90
1443 3590 2.223340 GGGTTGCTAAATGCGTCATCTG 60.223 50.000 0.00 0.00 46.63 2.90
1444 3591 2.677836 GGTTGCTAAATGCGTCATCTGA 59.322 45.455 0.00 0.00 46.63 3.27
1445 3592 3.313526 GGTTGCTAAATGCGTCATCTGAT 59.686 43.478 0.00 0.00 46.63 2.90
1446 3593 4.277258 GTTGCTAAATGCGTCATCTGATG 58.723 43.478 11.42 11.42 46.63 3.07
1447 3594 3.534554 TGCTAAATGCGTCATCTGATGT 58.465 40.909 16.66 0.00 46.63 3.06
1448 3595 3.940852 TGCTAAATGCGTCATCTGATGTT 59.059 39.130 16.66 5.95 46.63 2.71
1449 3596 4.395854 TGCTAAATGCGTCATCTGATGTTT 59.604 37.500 16.66 11.69 46.63 2.83
1450 3597 5.106197 TGCTAAATGCGTCATCTGATGTTTT 60.106 36.000 16.66 11.79 46.63 2.43
1451 3598 5.453587 GCTAAATGCGTCATCTGATGTTTTC 59.546 40.000 16.66 6.34 33.71 2.29
1452 3599 4.361451 AATGCGTCATCTGATGTTTTCC 57.639 40.909 16.66 4.19 33.71 3.13
1453 3600 3.057969 TGCGTCATCTGATGTTTTCCT 57.942 42.857 16.66 0.00 33.71 3.36
1454 3601 2.743664 TGCGTCATCTGATGTTTTCCTG 59.256 45.455 16.66 2.83 33.71 3.86
1455 3602 2.096496 GCGTCATCTGATGTTTTCCTGG 59.904 50.000 16.66 0.00 33.71 4.45
1456 3603 2.096496 CGTCATCTGATGTTTTCCTGGC 59.904 50.000 16.66 0.00 0.00 4.85
1457 3604 2.424956 GTCATCTGATGTTTTCCTGGCC 59.575 50.000 16.66 0.00 0.00 5.36
1458 3605 2.041485 TCATCTGATGTTTTCCTGGCCA 59.959 45.455 16.66 4.71 0.00 5.36
1459 3606 2.905415 TCTGATGTTTTCCTGGCCAT 57.095 45.000 5.51 0.00 0.00 4.40
1460 3607 2.449464 TCTGATGTTTTCCTGGCCATG 58.551 47.619 5.51 2.84 0.00 3.66
1461 3608 1.479323 CTGATGTTTTCCTGGCCATGG 59.521 52.381 5.51 7.63 0.00 3.66
1462 3609 0.176449 GATGTTTTCCTGGCCATGGC 59.824 55.000 29.47 29.47 41.06 4.40
1463 3610 0.544833 ATGTTTTCCTGGCCATGGCA 60.545 50.000 36.56 21.67 44.11 4.92
1475 3622 2.277737 ATGGCAGCCATGTGGGAG 59.722 61.111 27.14 0.00 43.39 4.30
1476 3623 3.369410 ATGGCAGCCATGTGGGAGG 62.369 63.158 27.14 0.00 43.39 4.30
1477 3624 4.828296 GGCAGCCATGTGGGAGGG 62.828 72.222 6.55 0.00 40.01 4.30
1478 3625 3.731728 GCAGCCATGTGGGAGGGA 61.732 66.667 0.54 0.00 40.01 4.20
1479 3626 2.593978 CAGCCATGTGGGAGGGAG 59.406 66.667 0.54 0.00 40.01 4.30
1480 3627 2.693864 AGCCATGTGGGAGGGAGG 60.694 66.667 0.54 0.00 40.01 4.30
1481 3628 4.512914 GCCATGTGGGAGGGAGGC 62.513 72.222 0.54 0.00 40.01 4.70
1482 3629 4.181010 CCATGTGGGAGGGAGGCG 62.181 72.222 0.00 0.00 40.01 5.52
1483 3630 3.083349 CATGTGGGAGGGAGGCGA 61.083 66.667 0.00 0.00 0.00 5.54
1484 3631 2.765807 ATGTGGGAGGGAGGCGAG 60.766 66.667 0.00 0.00 0.00 5.03
1485 3632 3.625632 ATGTGGGAGGGAGGCGAGT 62.626 63.158 0.00 0.00 0.00 4.18
1486 3633 2.043248 GTGGGAGGGAGGCGAGTA 60.043 66.667 0.00 0.00 0.00 2.59
1487 3634 2.128507 GTGGGAGGGAGGCGAGTAG 61.129 68.421 0.00 0.00 0.00 2.57
1488 3635 2.279408 GGGAGGGAGGCGAGTAGT 59.721 66.667 0.00 0.00 0.00 2.73
1489 3636 1.381463 GGGAGGGAGGCGAGTAGTT 60.381 63.158 0.00 0.00 0.00 2.24
1490 3637 0.106318 GGGAGGGAGGCGAGTAGTTA 60.106 60.000 0.00 0.00 0.00 2.24
1491 3638 1.320507 GGAGGGAGGCGAGTAGTTAG 58.679 60.000 0.00 0.00 0.00 2.34
1492 3639 0.669619 GAGGGAGGCGAGTAGTTAGC 59.330 60.000 0.00 0.00 0.00 3.09
1493 3640 0.033405 AGGGAGGCGAGTAGTTAGCA 60.033 55.000 0.00 0.00 0.00 3.49
1494 3641 1.041437 GGGAGGCGAGTAGTTAGCAT 58.959 55.000 0.00 0.00 0.00 3.79
1495 3642 2.158505 AGGGAGGCGAGTAGTTAGCATA 60.159 50.000 0.00 0.00 0.00 3.14
1496 3643 2.229302 GGGAGGCGAGTAGTTAGCATAG 59.771 54.545 0.00 0.00 0.00 2.23
1497 3644 2.229302 GGAGGCGAGTAGTTAGCATAGG 59.771 54.545 0.00 0.00 0.00 2.57
1498 3645 1.614413 AGGCGAGTAGTTAGCATAGGC 59.386 52.381 0.00 0.00 41.61 3.93
1499 3646 1.336980 GGCGAGTAGTTAGCATAGGCC 60.337 57.143 0.00 0.00 42.56 5.19
1500 3647 1.614413 GCGAGTAGTTAGCATAGGCCT 59.386 52.381 11.78 11.78 42.56 5.19
1501 3648 2.036089 GCGAGTAGTTAGCATAGGCCTT 59.964 50.000 12.58 0.00 42.56 4.35
1502 3649 3.643763 CGAGTAGTTAGCATAGGCCTTG 58.356 50.000 12.58 10.73 42.56 3.61
1503 3650 3.553096 CGAGTAGTTAGCATAGGCCTTGG 60.553 52.174 12.58 4.44 42.56 3.61
1504 3651 2.706190 AGTAGTTAGCATAGGCCTTGGG 59.294 50.000 12.58 1.32 42.56 4.12
1505 3652 1.596496 AGTTAGCATAGGCCTTGGGT 58.404 50.000 12.58 12.22 42.56 4.51
1506 3653 1.212935 AGTTAGCATAGGCCTTGGGTG 59.787 52.381 12.58 6.67 42.56 4.61
1507 3654 0.550914 TTAGCATAGGCCTTGGGTGG 59.449 55.000 12.58 0.00 42.56 4.61
1515 3662 3.953775 CCTTGGGTGGCGTGGAGT 61.954 66.667 0.00 0.00 0.00 3.85
1516 3663 2.113139 CTTGGGTGGCGTGGAGTT 59.887 61.111 0.00 0.00 0.00 3.01
1517 3664 1.528309 CTTGGGTGGCGTGGAGTTT 60.528 57.895 0.00 0.00 0.00 2.66
1518 3665 1.076632 TTGGGTGGCGTGGAGTTTT 60.077 52.632 0.00 0.00 0.00 2.43
1519 3666 1.388065 TTGGGTGGCGTGGAGTTTTG 61.388 55.000 0.00 0.00 0.00 2.44
1520 3667 1.527380 GGGTGGCGTGGAGTTTTGA 60.527 57.895 0.00 0.00 0.00 2.69
1521 3668 1.652563 GGTGGCGTGGAGTTTTGAC 59.347 57.895 0.00 0.00 0.00 3.18
1522 3669 1.098712 GGTGGCGTGGAGTTTTGACA 61.099 55.000 0.00 0.00 0.00 3.58
1523 3670 0.951558 GTGGCGTGGAGTTTTGACAT 59.048 50.000 0.00 0.00 0.00 3.06
1524 3671 0.950836 TGGCGTGGAGTTTTGACATG 59.049 50.000 0.00 0.00 0.00 3.21
1525 3672 0.951558 GGCGTGGAGTTTTGACATGT 59.048 50.000 0.00 0.00 0.00 3.21
1526 3673 1.336755 GGCGTGGAGTTTTGACATGTT 59.663 47.619 0.00 0.00 0.00 2.71
1527 3674 2.604614 GGCGTGGAGTTTTGACATGTTC 60.605 50.000 0.00 0.00 0.00 3.18
1528 3675 2.604614 GCGTGGAGTTTTGACATGTTCC 60.605 50.000 0.00 2.00 0.00 3.62
1529 3676 2.878406 CGTGGAGTTTTGACATGTTCCT 59.122 45.455 12.14 0.00 0.00 3.36
1530 3677 3.303990 CGTGGAGTTTTGACATGTTCCTG 60.304 47.826 12.14 3.04 0.00 3.86
1531 3678 2.622942 TGGAGTTTTGACATGTTCCTGC 59.377 45.455 12.14 5.11 0.00 4.85
1532 3679 2.622942 GGAGTTTTGACATGTTCCTGCA 59.377 45.455 0.00 0.00 0.00 4.41
1533 3680 3.256631 GGAGTTTTGACATGTTCCTGCAT 59.743 43.478 0.00 0.00 0.00 3.96
1540 3687 1.753930 CATGTTCCTGCATGTAGGCA 58.246 50.000 23.91 17.22 40.81 4.75
1541 3688 2.304092 CATGTTCCTGCATGTAGGCAT 58.696 47.619 23.91 18.59 43.97 4.40
1554 3701 6.872628 CATGTAGGCATGTCATGTAAATCT 57.127 37.500 14.26 7.17 45.48 2.40
1555 3702 6.665465 CATGTAGGCATGTCATGTAAATCTG 58.335 40.000 14.26 3.13 45.48 2.90
1556 3703 5.744171 TGTAGGCATGTCATGTAAATCTGT 58.256 37.500 14.26 0.00 0.00 3.41
1557 3704 5.585844 TGTAGGCATGTCATGTAAATCTGTG 59.414 40.000 14.26 0.00 0.00 3.66
1558 3705 3.949754 AGGCATGTCATGTAAATCTGTGG 59.050 43.478 14.26 0.00 0.00 4.17
1559 3706 3.947196 GGCATGTCATGTAAATCTGTGGA 59.053 43.478 14.26 0.00 0.00 4.02
1560 3707 4.201950 GGCATGTCATGTAAATCTGTGGAC 60.202 45.833 14.26 0.00 0.00 4.02
1561 3708 4.637534 GCATGTCATGTAAATCTGTGGACT 59.362 41.667 14.26 0.00 0.00 3.85
1562 3709 5.124457 GCATGTCATGTAAATCTGTGGACTT 59.876 40.000 14.26 0.00 0.00 3.01
1563 3710 6.349611 GCATGTCATGTAAATCTGTGGACTTT 60.350 38.462 14.26 0.00 0.00 2.66
1564 3711 6.558771 TGTCATGTAAATCTGTGGACTTTG 57.441 37.500 0.00 0.00 0.00 2.77
1565 3712 5.473162 TGTCATGTAAATCTGTGGACTTTGG 59.527 40.000 0.00 0.00 0.00 3.28
1566 3713 5.009631 TCATGTAAATCTGTGGACTTTGGG 58.990 41.667 0.00 0.00 0.00 4.12
1567 3714 3.761897 TGTAAATCTGTGGACTTTGGGG 58.238 45.455 0.00 0.00 0.00 4.96
1568 3715 3.139397 TGTAAATCTGTGGACTTTGGGGT 59.861 43.478 0.00 0.00 0.00 4.95
1569 3716 3.328535 AAATCTGTGGACTTTGGGGTT 57.671 42.857 0.00 0.00 0.00 4.11
1570 3717 2.586648 ATCTGTGGACTTTGGGGTTC 57.413 50.000 0.00 0.00 0.00 3.62
1571 3718 1.518367 TCTGTGGACTTTGGGGTTCT 58.482 50.000 0.00 0.00 0.00 3.01
1572 3719 1.850345 TCTGTGGACTTTGGGGTTCTT 59.150 47.619 0.00 0.00 0.00 2.52
1573 3720 2.243736 TCTGTGGACTTTGGGGTTCTTT 59.756 45.455 0.00 0.00 0.00 2.52
1574 3721 2.623416 CTGTGGACTTTGGGGTTCTTTC 59.377 50.000 0.00 0.00 0.00 2.62
1575 3722 1.961394 GTGGACTTTGGGGTTCTTTCC 59.039 52.381 0.00 0.00 0.00 3.13
1576 3723 1.133294 TGGACTTTGGGGTTCTTTCCC 60.133 52.381 0.00 0.00 46.31 3.97
1584 3731 2.677542 GGGTTCTTTCCCCACTTCTT 57.322 50.000 0.00 0.00 42.15 2.52
1585 3732 2.515854 GGGTTCTTTCCCCACTTCTTC 58.484 52.381 0.00 0.00 42.15 2.87
1586 3733 2.158519 GGGTTCTTTCCCCACTTCTTCA 60.159 50.000 0.00 0.00 42.15 3.02
1587 3734 3.562182 GGTTCTTTCCCCACTTCTTCAA 58.438 45.455 0.00 0.00 0.00 2.69
1588 3735 4.152647 GGTTCTTTCCCCACTTCTTCAAT 58.847 43.478 0.00 0.00 0.00 2.57
1589 3736 5.321927 GGTTCTTTCCCCACTTCTTCAATA 58.678 41.667 0.00 0.00 0.00 1.90
1590 3737 5.952347 GGTTCTTTCCCCACTTCTTCAATAT 59.048 40.000 0.00 0.00 0.00 1.28
1591 3738 7.116736 GGTTCTTTCCCCACTTCTTCAATATA 58.883 38.462 0.00 0.00 0.00 0.86
1592 3739 7.780271 GGTTCTTTCCCCACTTCTTCAATATAT 59.220 37.037 0.00 0.00 0.00 0.86
1593 3740 8.624776 GTTCTTTCCCCACTTCTTCAATATATG 58.375 37.037 0.00 0.00 0.00 1.78
1594 3741 8.101309 TCTTTCCCCACTTCTTCAATATATGA 57.899 34.615 0.00 0.00 35.85 2.15
1595 3742 8.727149 TCTTTCCCCACTTCTTCAATATATGAT 58.273 33.333 0.00 0.00 38.03 2.45
1597 3744 9.793259 TTTCCCCACTTCTTCAATATATGATAC 57.207 33.333 0.00 0.00 38.03 2.24
1598 3745 7.611770 TCCCCACTTCTTCAATATATGATACG 58.388 38.462 0.00 0.00 38.03 3.06
1599 3746 6.313905 CCCCACTTCTTCAATATATGATACGC 59.686 42.308 0.00 0.00 38.03 4.42
1600 3747 6.873605 CCCACTTCTTCAATATATGATACGCA 59.126 38.462 0.00 0.00 38.03 5.24
1601 3748 7.148573 CCCACTTCTTCAATATATGATACGCAC 60.149 40.741 0.00 0.00 38.03 5.34
1602 3749 7.384932 CCACTTCTTCAATATATGATACGCACA 59.615 37.037 0.00 0.00 38.03 4.57
1603 3750 8.217115 CACTTCTTCAATATATGATACGCACAC 58.783 37.037 0.00 0.00 38.03 3.82
1604 3751 8.144478 ACTTCTTCAATATATGATACGCACACT 58.856 33.333 0.00 0.00 38.03 3.55
1605 3752 8.520835 TTCTTCAATATATGATACGCACACTC 57.479 34.615 0.00 0.00 38.03 3.51
1606 3753 6.801862 TCTTCAATATATGATACGCACACTCG 59.198 38.462 0.00 0.00 38.03 4.18
1607 3754 6.009115 TCAATATATGATACGCACACTCGT 57.991 37.500 0.00 0.00 38.61 4.18
1608 3755 5.856455 TCAATATATGATACGCACACTCGTG 59.144 40.000 0.00 0.00 38.56 4.35
1617 3764 3.010088 CACACTCGTGCGTATTCGA 57.990 52.632 0.00 0.00 36.06 3.71
1656 3811 8.367911 TCATTACGCTTGAATCTGATAGGTTAT 58.632 33.333 0.00 0.00 0.00 1.89
1657 3812 8.993121 CATTACGCTTGAATCTGATAGGTTATT 58.007 33.333 0.00 0.00 0.00 1.40
1718 3873 4.454678 TCATCAAAATGAGGAATCTCCCG 58.545 43.478 0.00 0.00 33.94 5.14
1728 3883 1.486211 GAATCTCCCGGAACTCTGGA 58.514 55.000 0.73 0.00 45.36 3.86
1748 3903 9.231297 CTCTGGACCTAGATTTTGTTGAAAATA 57.769 33.333 0.00 0.00 41.06 1.40
1912 4067 6.704493 TGTTATGTCCTTCAGTCTTGTTGTAC 59.296 38.462 0.00 0.00 0.00 2.90
2099 4264 5.370679 TGCTACTGTCAGATATACCGTACA 58.629 41.667 6.91 0.00 0.00 2.90
2128 4293 2.562298 ACATCCGTGCAATCATGGTTTT 59.438 40.909 0.00 0.00 46.99 2.43
2223 4388 7.147312 TGGAACTGAGCAAAACTTATTGAATG 58.853 34.615 0.00 0.00 31.84 2.67
2312 4477 0.519519 TGCCTTTTGTATTGACGCGG 59.480 50.000 12.47 0.00 0.00 6.46
2661 7042 9.797642 TTAACATGAATGCCTATGATCTATGTT 57.202 29.630 0.00 0.00 39.00 2.71
2863 7247 4.464244 TCTCTCATCGAACCATTCTGTTCT 59.536 41.667 0.00 0.00 41.95 3.01
3075 7462 9.832445 ACTGTTCTGTTTTTAGAAGTGAAGATA 57.168 29.630 0.00 0.00 37.36 1.98
3166 7555 2.365617 CCTCGCTGGTCTTGGTATGTAT 59.634 50.000 0.00 0.00 0.00 2.29
3196 7588 8.632679 AGTGCCCATATCAAACTAATATTTGTG 58.367 33.333 3.24 0.00 39.97 3.33
3219 7611 9.396022 TGTGGATTATTTTCTTTCCTATCTGTC 57.604 33.333 0.00 0.00 0.00 3.51
3324 7719 1.905215 ACAGCTCACACTTGCTAGGAT 59.095 47.619 0.00 0.00 37.81 3.24
3478 7880 2.066262 GACCACACGATACTGGTTGTG 58.934 52.381 0.00 0.00 41.09 3.33
3573 7975 7.037802 TGGAGCCAGTATTGAATATCTCATGAT 60.038 37.037 0.00 0.00 32.78 2.45
3579 7981 9.747293 CAGTATTGAATATCTCATGATCGCTAT 57.253 33.333 0.00 0.00 32.78 2.97
3592 7994 8.117813 TCATGATCGCTATATACTGGTTGTTA 57.882 34.615 0.00 0.00 0.00 2.41
3617 8019 0.393402 TTCGATTCAGGCATGCAGCT 60.393 50.000 21.36 5.19 44.79 4.24
4011 8460 6.883756 TGACATTTGAATGAGTATAAGGCACA 59.116 34.615 10.48 0.00 39.67 4.57
4012 8461 7.557358 TGACATTTGAATGAGTATAAGGCACAT 59.443 33.333 10.48 0.00 39.67 3.21
4016 8465 8.800370 TTTGAATGAGTATAAGGCACATGTTA 57.200 30.769 0.00 0.00 0.00 2.41
4056 8505 4.098960 TGACTCCATAACTACCGGATGTTC 59.901 45.833 9.46 0.00 0.00 3.18
4058 8507 2.132762 CCATAACTACCGGATGTTCGC 58.867 52.381 9.46 0.00 0.00 4.70
4066 8515 2.650322 ACCGGATGTTCGCCAATAATT 58.350 42.857 9.46 0.00 0.00 1.40
4067 8516 3.811083 ACCGGATGTTCGCCAATAATTA 58.189 40.909 9.46 0.00 0.00 1.40
4069 8518 3.813166 CCGGATGTTCGCCAATAATTACT 59.187 43.478 0.00 0.00 0.00 2.24
4070 8519 4.992319 CCGGATGTTCGCCAATAATTACTA 59.008 41.667 0.00 0.00 0.00 1.82
4072 8521 5.120208 CGGATGTTCGCCAATAATTACTAGG 59.880 44.000 0.00 0.00 0.00 3.02
4073 8522 6.228258 GGATGTTCGCCAATAATTACTAGGA 58.772 40.000 0.00 0.00 0.00 2.94
4074 8523 6.879458 GGATGTTCGCCAATAATTACTAGGAT 59.121 38.462 0.00 0.00 0.00 3.24
4075 8524 7.148407 GGATGTTCGCCAATAATTACTAGGATG 60.148 40.741 0.00 0.00 0.00 3.51
4076 8525 5.468746 TGTTCGCCAATAATTACTAGGATGC 59.531 40.000 0.00 0.00 0.00 3.91
4082 8531 8.730680 CGCCAATAATTACTAGGATGCTATTTT 58.269 33.333 0.00 0.00 0.00 1.82
4083 8532 9.846248 GCCAATAATTACTAGGATGCTATTTTG 57.154 33.333 0.00 0.00 0.00 2.44
4085 8534 9.546909 CAATAATTACTAGGATGCTATTTTGCG 57.453 33.333 0.00 0.00 35.36 4.85
4088 8537 7.653767 ATTACTAGGATGCTATTTTGCGTAC 57.346 36.000 0.00 0.00 35.36 3.67
4115 8564 5.706833 TCTGTTCATGTGCACAAATACAGAT 59.293 36.000 33.88 15.41 36.43 2.90
4117 8566 5.241285 TGTTCATGTGCACAAATACAGATGT 59.759 36.000 25.72 0.00 38.38 3.06
4122 8571 2.178474 CACAAATACAGATGTGCGGC 57.822 50.000 0.00 0.00 40.32 6.53
4123 8572 1.468127 CACAAATACAGATGTGCGGCA 59.532 47.619 0.00 0.00 40.32 5.69
4124 8573 2.097954 CACAAATACAGATGTGCGGCAT 59.902 45.455 5.72 0.00 40.32 4.40
4125 8574 2.097954 ACAAATACAGATGTGCGGCATG 59.902 45.455 5.72 2.39 38.06 4.06
4126 8575 2.042686 AATACAGATGTGCGGCATGT 57.957 45.000 5.72 9.14 38.06 3.21
4139 8588 2.283298 CGGCATGTGCTCTCAGTTAAT 58.717 47.619 4.84 0.00 41.70 1.40
4141 8590 3.127548 CGGCATGTGCTCTCAGTTAATTT 59.872 43.478 4.84 0.00 41.70 1.82
4170 8619 3.002791 GAGTCTGACCGAATGAAATGCA 58.997 45.455 3.76 0.00 0.00 3.96
4171 8620 2.744202 AGTCTGACCGAATGAAATGCAC 59.256 45.455 3.76 0.00 0.00 4.57
4172 8621 2.083774 TCTGACCGAATGAAATGCACC 58.916 47.619 0.00 0.00 0.00 5.01
4173 8622 1.133025 CTGACCGAATGAAATGCACCC 59.867 52.381 0.00 0.00 0.00 4.61
4174 8623 1.173043 GACCGAATGAAATGCACCCA 58.827 50.000 0.00 0.00 0.00 4.51
4175 8624 0.887933 ACCGAATGAAATGCACCCAC 59.112 50.000 0.00 0.00 0.00 4.61
4176 8625 0.887247 CCGAATGAAATGCACCCACA 59.113 50.000 0.00 0.00 0.00 4.17
4177 8626 1.135315 CCGAATGAAATGCACCCACAG 60.135 52.381 0.00 0.00 0.00 3.66
4182 8631 1.133513 TGAAATGCACCCACAGACCTT 60.134 47.619 0.00 0.00 0.00 3.50
4190 8647 1.227823 CCACAGACCTTCCGTTGCA 60.228 57.895 0.00 0.00 0.00 4.08
4199 8656 1.611673 CCTTCCGTTGCACATCTCCTT 60.612 52.381 0.00 0.00 0.00 3.36
4201 8658 2.672961 TCCGTTGCACATCTCCTTAG 57.327 50.000 0.00 0.00 0.00 2.18
4202 8659 1.899814 TCCGTTGCACATCTCCTTAGT 59.100 47.619 0.00 0.00 0.00 2.24
4213 8670 6.018098 GCACATCTCCTTAGTCATGAATGAAG 60.018 42.308 5.80 5.80 38.75 3.02
4214 8671 7.046652 CACATCTCCTTAGTCATGAATGAAGT 58.953 38.462 5.80 0.00 38.75 3.01
4218 8675 8.553459 TCTCCTTAGTCATGAATGAAGTTTTC 57.447 34.615 5.80 0.00 38.75 2.29
4221 8678 4.425577 AGTCATGAATGAAGTTTTCGCC 57.574 40.909 0.00 0.00 38.75 5.54
4223 8680 2.811431 TCATGAATGAAGTTTTCGCCGT 59.189 40.909 0.00 0.00 33.08 5.68
4232 8689 6.340537 TGAAGTTTTCGCCGTCTTTATATC 57.659 37.500 0.00 0.00 0.00 1.63
4233 8690 5.292589 TGAAGTTTTCGCCGTCTTTATATCC 59.707 40.000 0.00 0.00 0.00 2.59
4258 8715 4.460382 CACCCATGTTTGAGTCTTTGCTAT 59.540 41.667 0.00 0.00 0.00 2.97
4260 8717 6.319658 CACCCATGTTTGAGTCTTTGCTATAT 59.680 38.462 0.00 0.00 0.00 0.86
4261 8718 6.319658 ACCCATGTTTGAGTCTTTGCTATATG 59.680 38.462 0.00 0.00 0.00 1.78
4262 8719 6.543465 CCCATGTTTGAGTCTTTGCTATATGA 59.457 38.462 0.00 0.00 0.00 2.15
4301 8758 7.279615 TCAAACCATATACAATAGTGAGGTGG 58.720 38.462 0.00 2.41 0.00 4.61
4304 8761 7.924358 ACCATATACAATAGTGAGGTGGTAA 57.076 36.000 0.00 0.00 35.81 2.85
4365 20010 3.605749 TAGCGAAGTGGCACCTGGC 62.606 63.158 15.27 14.83 43.74 4.85
4482 20130 2.446435 TGGGAAAACATAGAAGCCAGC 58.554 47.619 0.00 0.00 0.00 4.85
4534 20182 2.303022 TCTTTCCTTGACGCTCTTCCAT 59.697 45.455 0.00 0.00 0.00 3.41
4614 20262 6.959639 TTTTTGACCATAAAGAGAAGTGCT 57.040 33.333 0.00 0.00 0.00 4.40
4615 20263 6.959639 TTTTGACCATAAAGAGAAGTGCTT 57.040 33.333 0.00 0.00 0.00 3.91
4616 20264 6.560253 TTTGACCATAAAGAGAAGTGCTTC 57.440 37.500 3.89 3.89 39.78 3.86
4617 20265 4.245660 TGACCATAAAGAGAAGTGCTTCG 58.754 43.478 6.32 0.00 43.97 3.79
4618 20266 3.600388 ACCATAAAGAGAAGTGCTTCGG 58.400 45.455 6.32 3.09 43.97 4.30
4619 20267 3.008049 ACCATAAAGAGAAGTGCTTCGGT 59.992 43.478 6.32 3.64 43.97 4.69
4620 20268 4.222145 ACCATAAAGAGAAGTGCTTCGGTA 59.778 41.667 6.32 0.00 43.97 4.02
4621 20269 4.567159 CCATAAAGAGAAGTGCTTCGGTAC 59.433 45.833 6.32 0.00 43.97 3.34
4622 20270 3.746045 AAAGAGAAGTGCTTCGGTACA 57.254 42.857 6.32 0.00 43.97 2.90
4623 20271 2.726832 AGAGAAGTGCTTCGGTACAC 57.273 50.000 6.32 0.00 43.97 2.90
4624 20272 1.272769 AGAGAAGTGCTTCGGTACACC 59.727 52.381 6.32 0.00 43.97 4.16
4625 20273 0.320697 AGAAGTGCTTCGGTACACCC 59.679 55.000 6.32 0.00 43.97 4.61
4626 20274 0.672711 GAAGTGCTTCGGTACACCCC 60.673 60.000 0.00 0.00 37.51 4.95
4627 20275 2.046604 GTGCTTCGGTACACCCCC 60.047 66.667 0.00 0.00 0.00 5.40
4648 20296 7.634671 CCCCCTCATAAAACGTATAAAGTTT 57.365 36.000 0.00 0.00 42.86 2.66
4662 20310 9.260002 ACGTATAAAGTTTTGTATAATACCCGG 57.740 33.333 0.00 0.00 0.00 5.73
4663 20311 8.223100 CGTATAAAGTTTTGTATAATACCCGGC 58.777 37.037 0.00 0.00 0.00 6.13
4664 20312 5.488645 AAAGTTTTGTATAATACCCGGCG 57.511 39.130 0.00 0.00 0.00 6.46
4665 20313 4.405116 AGTTTTGTATAATACCCGGCGA 57.595 40.909 9.30 0.00 0.00 5.54
4666 20314 4.768583 AGTTTTGTATAATACCCGGCGAA 58.231 39.130 9.30 0.00 0.00 4.70
4667 20315 4.571984 AGTTTTGTATAATACCCGGCGAAC 59.428 41.667 9.30 0.00 0.00 3.95
4668 20316 3.815856 TTGTATAATACCCGGCGAACA 57.184 42.857 9.30 0.00 0.00 3.18
4669 20317 3.374220 TGTATAATACCCGGCGAACAG 57.626 47.619 9.30 0.00 0.00 3.16
4679 20327 3.089784 GCGAACAGCCCATGTACG 58.910 61.111 0.00 0.00 43.00 3.67
4680 20328 1.740296 GCGAACAGCCCATGTACGT 60.740 57.895 0.00 0.00 43.00 3.57
4681 20329 1.296056 GCGAACAGCCCATGTACGTT 61.296 55.000 0.00 0.00 43.00 3.99
4682 20330 1.153353 CGAACAGCCCATGTACGTTT 58.847 50.000 0.00 0.00 43.00 3.60
4683 20331 1.533731 CGAACAGCCCATGTACGTTTT 59.466 47.619 0.00 0.00 43.00 2.43
4684 20332 2.031508 CGAACAGCCCATGTACGTTTTT 60.032 45.455 0.00 0.00 43.00 1.94
4721 20369 3.967332 AAAAATGGATGCCCTCAACTG 57.033 42.857 0.00 0.00 0.00 3.16
4722 20370 1.856629 AAATGGATGCCCTCAACTGG 58.143 50.000 0.00 0.00 0.00 4.00
4723 20371 1.002069 AATGGATGCCCTCAACTGGA 58.998 50.000 0.00 0.00 0.00 3.86
4724 20372 1.229131 ATGGATGCCCTCAACTGGAT 58.771 50.000 0.00 0.00 0.00 3.41
4725 20373 1.002069 TGGATGCCCTCAACTGGATT 58.998 50.000 0.00 0.00 0.00 3.01
4726 20374 1.064463 TGGATGCCCTCAACTGGATTC 60.064 52.381 0.00 0.00 0.00 2.52
4727 20375 1.303309 GATGCCCTCAACTGGATTCG 58.697 55.000 0.00 0.00 0.00 3.34
4728 20376 0.911769 ATGCCCTCAACTGGATTCGA 59.088 50.000 0.00 0.00 0.00 3.71
4729 20377 0.690192 TGCCCTCAACTGGATTCGAA 59.310 50.000 0.00 0.00 0.00 3.71
4730 20378 1.087501 GCCCTCAACTGGATTCGAAC 58.912 55.000 0.00 0.00 0.00 3.95
4731 20379 1.739067 CCCTCAACTGGATTCGAACC 58.261 55.000 0.00 4.86 0.00 3.62
4732 20380 1.003118 CCCTCAACTGGATTCGAACCA 59.997 52.381 15.60 15.60 35.96 3.67
4733 20381 2.076863 CCTCAACTGGATTCGAACCAC 58.923 52.381 13.34 2.69 33.57 4.16
4734 20382 2.549992 CCTCAACTGGATTCGAACCACA 60.550 50.000 13.34 6.71 33.57 4.17
4735 20383 2.738846 CTCAACTGGATTCGAACCACAG 59.261 50.000 18.53 18.53 33.57 3.66
4736 20384 1.197721 CAACTGGATTCGAACCACAGC 59.802 52.381 19.52 0.00 33.57 4.40
4737 20385 0.321653 ACTGGATTCGAACCACAGCC 60.322 55.000 19.52 3.80 33.57 4.85
4738 20386 1.002624 TGGATTCGAACCACAGCCC 60.003 57.895 13.34 2.75 32.03 5.19
4739 20387 1.749258 GGATTCGAACCACAGCCCC 60.749 63.158 0.00 0.00 0.00 5.80
4740 20388 1.749258 GATTCGAACCACAGCCCCC 60.749 63.158 0.00 0.00 0.00 5.40
4741 20389 2.478335 GATTCGAACCACAGCCCCCA 62.478 60.000 0.00 0.00 0.00 4.96
4742 20390 2.764637 ATTCGAACCACAGCCCCCAC 62.765 60.000 0.00 0.00 0.00 4.61
4768 20416 3.676091 GTGTAGCGCACAAACCATC 57.324 52.632 11.47 0.00 46.91 3.51
4769 20417 0.168128 GTGTAGCGCACAAACCATCC 59.832 55.000 11.47 0.00 46.91 3.51
4770 20418 1.295357 TGTAGCGCACAAACCATCCG 61.295 55.000 11.47 0.00 32.95 4.18
4771 20419 1.743623 TAGCGCACAAACCATCCGG 60.744 57.895 11.47 0.00 38.77 5.14
4772 20420 4.114997 GCGCACAAACCATCCGGG 62.115 66.667 0.30 0.00 44.81 5.73
4773 20421 2.359354 CGCACAAACCATCCGGGA 60.359 61.111 0.00 0.00 41.15 5.14
4774 20422 2.686816 CGCACAAACCATCCGGGAC 61.687 63.158 0.00 0.00 41.15 4.46
4775 20423 1.602323 GCACAAACCATCCGGGACA 60.602 57.895 0.00 0.00 41.15 4.02
4776 20424 1.175983 GCACAAACCATCCGGGACAA 61.176 55.000 0.00 0.00 41.15 3.18
4777 20425 0.596082 CACAAACCATCCGGGACAAC 59.404 55.000 0.00 0.00 41.15 3.32
4778 20426 0.183971 ACAAACCATCCGGGACAACA 59.816 50.000 0.00 0.00 41.15 3.33
4779 20427 1.323412 CAAACCATCCGGGACAACAA 58.677 50.000 0.00 0.00 41.15 2.83
4780 20428 1.683917 CAAACCATCCGGGACAACAAA 59.316 47.619 0.00 0.00 41.15 2.83
4781 20429 2.298729 CAAACCATCCGGGACAACAAAT 59.701 45.455 0.00 0.00 41.15 2.32
4782 20430 1.834188 ACCATCCGGGACAACAAATC 58.166 50.000 0.00 0.00 41.15 2.17
4783 20431 1.074727 ACCATCCGGGACAACAAATCA 59.925 47.619 0.00 0.00 41.15 2.57
4784 20432 1.745087 CCATCCGGGACAACAAATCAG 59.255 52.381 0.00 0.00 40.01 2.90
4785 20433 2.617788 CCATCCGGGACAACAAATCAGA 60.618 50.000 0.00 0.00 40.01 3.27
4786 20434 3.282021 CATCCGGGACAACAAATCAGAT 58.718 45.455 0.00 0.00 0.00 2.90
4787 20435 3.433306 TCCGGGACAACAAATCAGATT 57.567 42.857 0.00 0.00 0.00 2.40
4788 20436 3.761897 TCCGGGACAACAAATCAGATTT 58.238 40.909 0.00 2.20 0.00 2.17
4789 20437 8.770753 CCATCCGGGACAACAAATCAGATTTG 62.771 46.154 27.64 27.64 46.56 2.32
4799 20447 4.817517 CAAATCAGATTTGCTTTCCTGCT 58.182 39.130 20.52 0.00 42.57 4.24
4800 20448 5.235516 CAAATCAGATTTGCTTTCCTGCTT 58.764 37.500 20.52 0.00 42.57 3.91
4801 20449 3.928727 TCAGATTTGCTTTCCTGCTTG 57.071 42.857 0.00 0.00 0.00 4.01
4802 20450 3.225104 TCAGATTTGCTTTCCTGCTTGT 58.775 40.909 0.00 0.00 0.00 3.16
4803 20451 3.638160 TCAGATTTGCTTTCCTGCTTGTT 59.362 39.130 0.00 0.00 0.00 2.83
4804 20452 4.099881 TCAGATTTGCTTTCCTGCTTGTTT 59.900 37.500 0.00 0.00 0.00 2.83
4805 20453 4.812626 CAGATTTGCTTTCCTGCTTGTTTT 59.187 37.500 0.00 0.00 0.00 2.43
4806 20454 5.050567 CAGATTTGCTTTCCTGCTTGTTTTC 60.051 40.000 0.00 0.00 0.00 2.29
4807 20455 4.470334 TTTGCTTTCCTGCTTGTTTTCT 57.530 36.364 0.00 0.00 0.00 2.52
4808 20456 3.441496 TGCTTTCCTGCTTGTTTTCTG 57.559 42.857 0.00 0.00 0.00 3.02
4809 20457 3.023119 TGCTTTCCTGCTTGTTTTCTGA 58.977 40.909 0.00 0.00 0.00 3.27
4810 20458 3.638160 TGCTTTCCTGCTTGTTTTCTGAT 59.362 39.130 0.00 0.00 0.00 2.90
4811 20459 4.099881 TGCTTTCCTGCTTGTTTTCTGATT 59.900 37.500 0.00 0.00 0.00 2.57
4812 20460 4.446719 GCTTTCCTGCTTGTTTTCTGATTG 59.553 41.667 0.00 0.00 0.00 2.67
4813 20461 5.594926 CTTTCCTGCTTGTTTTCTGATTGT 58.405 37.500 0.00 0.00 0.00 2.71
4814 20462 5.596836 TTCCTGCTTGTTTTCTGATTGTT 57.403 34.783 0.00 0.00 0.00 2.83
4815 20463 4.935702 TCCTGCTTGTTTTCTGATTGTTG 58.064 39.130 0.00 0.00 0.00 3.33
4816 20464 4.402155 TCCTGCTTGTTTTCTGATTGTTGT 59.598 37.500 0.00 0.00 0.00 3.32
4817 20465 4.741676 CCTGCTTGTTTTCTGATTGTTGTC 59.258 41.667 0.00 0.00 0.00 3.18
4818 20466 4.681744 TGCTTGTTTTCTGATTGTTGTCC 58.318 39.130 0.00 0.00 0.00 4.02
4819 20467 4.051237 GCTTGTTTTCTGATTGTTGTCCC 58.949 43.478 0.00 0.00 0.00 4.46
4820 20468 4.620982 CTTGTTTTCTGATTGTTGTCCCC 58.379 43.478 0.00 0.00 0.00 4.81
4821 20469 3.636679 TGTTTTCTGATTGTTGTCCCCA 58.363 40.909 0.00 0.00 0.00 4.96
4822 20470 4.026744 TGTTTTCTGATTGTTGTCCCCAA 58.973 39.130 0.00 0.00 0.00 4.12
4823 20471 4.099266 TGTTTTCTGATTGTTGTCCCCAAG 59.901 41.667 0.00 0.00 0.00 3.61
4824 20472 3.874383 TTCTGATTGTTGTCCCCAAGA 57.126 42.857 0.00 0.00 0.00 3.02
4825 20473 3.874383 TCTGATTGTTGTCCCCAAGAA 57.126 42.857 0.00 0.00 38.11 2.52
4826 20474 4.177537 TCTGATTGTTGTCCCCAAGAAA 57.822 40.909 0.00 0.00 37.38 2.52
4827 20475 4.541705 TCTGATTGTTGTCCCCAAGAAAA 58.458 39.130 0.00 0.00 37.38 2.29
4828 20476 4.959210 TCTGATTGTTGTCCCCAAGAAAAA 59.041 37.500 0.00 0.00 37.38 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.476085 AGAATCTCAGTCAGCACCGAG 59.524 52.381 0.00 0.00 0.00 4.63
116 574 2.124693 GTCGAGCAGGGAGGGAGAG 61.125 68.421 0.00 0.00 0.00 3.20
118 576 2.363018 TGTCGAGCAGGGAGGGAG 60.363 66.667 0.00 0.00 0.00 4.30
120 578 3.775654 GGTGTCGAGCAGGGAGGG 61.776 72.222 0.00 0.00 0.00 4.30
354 1811 2.182030 GAAGACGCGGACCTCAGG 59.818 66.667 12.47 0.00 0.00 3.86
429 1893 1.349627 CCGCATCTGCATCGAACAC 59.650 57.895 2.72 0.00 42.21 3.32
508 1973 3.538634 AAGCCCGATGAAACTACCTAC 57.461 47.619 0.00 0.00 0.00 3.18
570 2581 8.486210 TGCTATAAGAAGATACACAGACCAAAT 58.514 33.333 0.00 0.00 0.00 2.32
572 2583 7.124298 ACTGCTATAAGAAGATACACAGACCAA 59.876 37.037 0.00 0.00 0.00 3.67
573 2584 6.607600 ACTGCTATAAGAAGATACACAGACCA 59.392 38.462 0.00 0.00 0.00 4.02
574 2585 7.045126 ACTGCTATAAGAAGATACACAGACC 57.955 40.000 0.00 0.00 0.00 3.85
575 2586 9.058174 TCTACTGCTATAAGAAGATACACAGAC 57.942 37.037 0.00 0.00 0.00 3.51
576 2587 9.278978 CTCTACTGCTATAAGAAGATACACAGA 57.721 37.037 0.00 0.00 0.00 3.41
577 2588 8.020819 GCTCTACTGCTATAAGAAGATACACAG 58.979 40.741 0.00 0.00 0.00 3.66
578 2589 7.040340 GGCTCTACTGCTATAAGAAGATACACA 60.040 40.741 0.00 0.00 0.00 3.72
579 2590 7.175990 AGGCTCTACTGCTATAAGAAGATACAC 59.824 40.741 0.00 0.00 0.00 2.90
580 2591 7.175816 CAGGCTCTACTGCTATAAGAAGATACA 59.824 40.741 0.00 0.00 0.00 2.29
581 2592 7.392113 TCAGGCTCTACTGCTATAAGAAGATAC 59.608 40.741 0.00 0.00 38.36 2.24
582 2593 7.392113 GTCAGGCTCTACTGCTATAAGAAGATA 59.608 40.741 0.00 0.00 38.36 1.98
583 2594 6.208599 GTCAGGCTCTACTGCTATAAGAAGAT 59.791 42.308 0.00 0.00 38.36 2.40
584 2595 5.533154 GTCAGGCTCTACTGCTATAAGAAGA 59.467 44.000 0.00 0.00 38.36 2.87
585 2596 5.300539 TGTCAGGCTCTACTGCTATAAGAAG 59.699 44.000 0.00 0.00 38.36 2.85
586 2597 5.201243 TGTCAGGCTCTACTGCTATAAGAA 58.799 41.667 0.00 0.00 38.36 2.52
587 2598 4.793201 TGTCAGGCTCTACTGCTATAAGA 58.207 43.478 0.00 0.00 38.36 2.10
588 2599 5.468592 CATGTCAGGCTCTACTGCTATAAG 58.531 45.833 0.00 0.00 38.36 1.73
589 2600 4.281941 CCATGTCAGGCTCTACTGCTATAA 59.718 45.833 0.00 0.00 38.36 0.98
590 2601 3.829026 CCATGTCAGGCTCTACTGCTATA 59.171 47.826 0.00 0.00 38.36 1.31
591 2602 2.632028 CCATGTCAGGCTCTACTGCTAT 59.368 50.000 0.00 0.00 38.36 2.97
592 2603 2.034878 CCATGTCAGGCTCTACTGCTA 58.965 52.381 0.00 0.00 38.36 3.49
593 2604 0.829333 CCATGTCAGGCTCTACTGCT 59.171 55.000 0.00 0.00 38.36 4.24
605 2616 0.035534 AACGGTGCTATGCCATGTCA 60.036 50.000 0.00 0.00 0.00 3.58
606 2617 0.657840 GAACGGTGCTATGCCATGTC 59.342 55.000 0.00 0.00 0.00 3.06
607 2618 0.253044 AGAACGGTGCTATGCCATGT 59.747 50.000 0.00 0.00 0.00 3.21
608 2619 1.382522 AAGAACGGTGCTATGCCATG 58.617 50.000 0.00 0.00 0.00 3.66
609 2620 3.275617 TTAAGAACGGTGCTATGCCAT 57.724 42.857 0.00 0.00 0.00 4.40
612 2623 6.539649 TCATAATTAAGAACGGTGCTATGC 57.460 37.500 0.00 0.00 0.00 3.14
734 2764 5.846473 GCTTACAATCAACTTTCTCGTGAAC 59.154 40.000 0.00 0.00 31.02 3.18
765 2796 9.378551 CTATAGAGACGAGATGATAAAGCTAGT 57.621 37.037 0.00 0.00 32.36 2.57
807 2888 7.826744 TGTCAATGGCATGATAAAGTAACAGTA 59.173 33.333 0.00 0.00 0.00 2.74
870 2960 6.428385 AAAATCAAGAGTAGGAAGATTGCG 57.572 37.500 0.00 0.00 0.00 4.85
900 2992 8.632679 AGCTTCAATTCAAGAAAACATTGTCTA 58.367 29.630 0.00 0.00 0.00 2.59
906 2998 6.453092 CCTCAGCTTCAATTCAAGAAAACAT 58.547 36.000 0.00 0.00 0.00 2.71
911 3003 3.489355 TGCCTCAGCTTCAATTCAAGAA 58.511 40.909 0.00 0.00 40.80 2.52
979 3117 0.385390 GTTTTGCAGTGGTGTGGAGG 59.615 55.000 0.00 0.00 0.00 4.30
984 3122 2.554032 GAGCATAGTTTTGCAGTGGTGT 59.446 45.455 0.00 0.00 45.23 4.16
1036 3174 0.530211 TTGAACGGACGAGGCGAAAA 60.530 50.000 0.00 0.00 0.00 2.29
1042 3180 1.067846 TGTCATCTTGAACGGACGAGG 60.068 52.381 0.00 0.00 33.04 4.63
1086 3224 0.969149 AAGATGAGAGCACACACGGA 59.031 50.000 0.00 0.00 0.00 4.69
1211 3350 2.036346 CACAAGAGGGGCAAGGAAAAAG 59.964 50.000 0.00 0.00 0.00 2.27
1217 3356 0.625849 ATACCACAAGAGGGGCAAGG 59.374 55.000 0.00 0.00 0.00 3.61
1227 3370 7.112779 ACTAGGAAAAATCCTCATACCACAAG 58.887 38.462 0.00 0.00 41.12 3.16
1363 3510 4.218417 GGTGTAGAATTTGCATGTGGTCTT 59.782 41.667 0.00 0.00 0.00 3.01
1364 3511 3.758554 GGTGTAGAATTTGCATGTGGTCT 59.241 43.478 0.00 0.00 0.00 3.85
1365 3512 3.505680 TGGTGTAGAATTTGCATGTGGTC 59.494 43.478 0.00 0.00 0.00 4.02
1366 3513 3.255642 GTGGTGTAGAATTTGCATGTGGT 59.744 43.478 0.00 0.00 0.00 4.16
1367 3514 3.255395 TGTGGTGTAGAATTTGCATGTGG 59.745 43.478 0.00 0.00 0.00 4.17
1368 3515 4.502171 TGTGGTGTAGAATTTGCATGTG 57.498 40.909 0.00 0.00 0.00 3.21
1369 3516 5.472148 CAATGTGGTGTAGAATTTGCATGT 58.528 37.500 0.00 0.00 0.00 3.21
1370 3517 4.327898 GCAATGTGGTGTAGAATTTGCATG 59.672 41.667 0.00 0.00 0.00 4.06
1371 3518 4.497300 GCAATGTGGTGTAGAATTTGCAT 58.503 39.130 0.00 0.00 0.00 3.96
1372 3519 3.611293 CGCAATGTGGTGTAGAATTTGCA 60.611 43.478 0.00 0.00 0.00 4.08
1373 3520 2.916716 CGCAATGTGGTGTAGAATTTGC 59.083 45.455 0.00 0.00 0.00 3.68
1374 3521 4.083324 ACTCGCAATGTGGTGTAGAATTTG 60.083 41.667 0.00 0.00 0.00 2.32
1375 3522 4.072131 ACTCGCAATGTGGTGTAGAATTT 58.928 39.130 0.00 0.00 0.00 1.82
1376 3523 3.436704 CACTCGCAATGTGGTGTAGAATT 59.563 43.478 7.08 0.00 0.00 2.17
1377 3524 3.002791 CACTCGCAATGTGGTGTAGAAT 58.997 45.455 7.08 0.00 0.00 2.40
1378 3525 2.036604 TCACTCGCAATGTGGTGTAGAA 59.963 45.455 12.59 0.00 36.21 2.10
1379 3526 1.616374 TCACTCGCAATGTGGTGTAGA 59.384 47.619 12.59 3.65 36.21 2.59
1380 3527 1.995484 CTCACTCGCAATGTGGTGTAG 59.005 52.381 12.59 7.41 36.21 2.74
1381 3528 1.616374 TCTCACTCGCAATGTGGTGTA 59.384 47.619 12.59 3.66 36.21 2.90
1382 3529 0.392706 TCTCACTCGCAATGTGGTGT 59.607 50.000 12.59 2.53 36.21 4.16
1383 3530 1.073964 CTCTCACTCGCAATGTGGTG 58.926 55.000 8.45 8.45 36.21 4.17
1384 3531 0.681733 ACTCTCACTCGCAATGTGGT 59.318 50.000 0.00 0.00 36.21 4.16
1385 3532 2.534298 CTACTCTCACTCGCAATGTGG 58.466 52.381 0.00 0.00 36.21 4.17
1386 3533 2.534298 CCTACTCTCACTCGCAATGTG 58.466 52.381 0.00 0.00 36.82 3.21
1387 3534 1.478510 CCCTACTCTCACTCGCAATGT 59.521 52.381 0.00 0.00 0.00 2.71
1388 3535 1.804372 GCCCTACTCTCACTCGCAATG 60.804 57.143 0.00 0.00 0.00 2.82
1389 3536 0.461961 GCCCTACTCTCACTCGCAAT 59.538 55.000 0.00 0.00 0.00 3.56
1390 3537 1.605058 GGCCCTACTCTCACTCGCAA 61.605 60.000 0.00 0.00 0.00 4.85
1391 3538 2.052690 GGCCCTACTCTCACTCGCA 61.053 63.158 0.00 0.00 0.00 5.10
1392 3539 1.755008 AGGCCCTACTCTCACTCGC 60.755 63.158 0.00 0.00 0.00 5.03
1393 3540 1.388065 CCAGGCCCTACTCTCACTCG 61.388 65.000 0.00 0.00 0.00 4.18
1394 3541 0.033011 TCCAGGCCCTACTCTCACTC 60.033 60.000 0.00 0.00 0.00 3.51
1395 3542 0.032615 CTCCAGGCCCTACTCTCACT 60.033 60.000 0.00 0.00 0.00 3.41
1396 3543 1.045911 CCTCCAGGCCCTACTCTCAC 61.046 65.000 0.00 0.00 0.00 3.51
1397 3544 1.311403 CCTCCAGGCCCTACTCTCA 59.689 63.158 0.00 0.00 0.00 3.27
1398 3545 1.458588 CCCTCCAGGCCCTACTCTC 60.459 68.421 0.00 0.00 0.00 3.20
1399 3546 2.699496 CCCTCCAGGCCCTACTCT 59.301 66.667 0.00 0.00 0.00 3.24
1409 3556 3.655211 AACCCTGCTGCCCTCCAG 61.655 66.667 0.00 0.00 44.67 3.86
1410 3557 3.970410 CAACCCTGCTGCCCTCCA 61.970 66.667 0.00 0.00 0.00 3.86
1420 3567 1.164411 TGACGCATTTAGCAACCCTG 58.836 50.000 0.00 0.00 46.13 4.45
1421 3568 2.017049 GATGACGCATTTAGCAACCCT 58.983 47.619 0.00 0.00 46.13 4.34
1422 3569 2.017049 AGATGACGCATTTAGCAACCC 58.983 47.619 0.00 0.00 46.13 4.11
1423 3570 2.677836 TCAGATGACGCATTTAGCAACC 59.322 45.455 0.00 0.00 46.13 3.77
1424 3571 4.201851 ACATCAGATGACGCATTTAGCAAC 60.202 41.667 17.81 0.00 46.13 4.17
1425 3572 3.940852 ACATCAGATGACGCATTTAGCAA 59.059 39.130 17.81 0.00 46.13 3.91
1426 3573 3.534554 ACATCAGATGACGCATTTAGCA 58.465 40.909 17.81 0.00 46.13 3.49
1427 3574 4.542662 AACATCAGATGACGCATTTAGC 57.457 40.909 17.81 0.00 40.87 3.09
1428 3575 5.967674 GGAAAACATCAGATGACGCATTTAG 59.032 40.000 17.81 0.00 0.00 1.85
1429 3576 5.647658 AGGAAAACATCAGATGACGCATTTA 59.352 36.000 17.81 0.00 0.00 1.40
1430 3577 4.460382 AGGAAAACATCAGATGACGCATTT 59.540 37.500 17.81 9.31 0.00 2.32
1431 3578 4.012374 AGGAAAACATCAGATGACGCATT 58.988 39.130 17.81 4.36 0.00 3.56
1432 3579 3.376234 CAGGAAAACATCAGATGACGCAT 59.624 43.478 17.81 0.00 0.00 4.73
1433 3580 2.743664 CAGGAAAACATCAGATGACGCA 59.256 45.455 17.81 0.00 0.00 5.24
1434 3581 2.096496 CCAGGAAAACATCAGATGACGC 59.904 50.000 17.81 3.50 0.00 5.19
1435 3582 2.096496 GCCAGGAAAACATCAGATGACG 59.904 50.000 17.81 0.00 0.00 4.35
1436 3583 2.424956 GGCCAGGAAAACATCAGATGAC 59.575 50.000 17.81 5.47 0.00 3.06
1437 3584 2.041485 TGGCCAGGAAAACATCAGATGA 59.959 45.455 17.81 0.00 0.00 2.92
1438 3585 2.449464 TGGCCAGGAAAACATCAGATG 58.551 47.619 0.00 9.03 0.00 2.90
1439 3586 2.905415 TGGCCAGGAAAACATCAGAT 57.095 45.000 0.00 0.00 0.00 2.90
1440 3587 2.449464 CATGGCCAGGAAAACATCAGA 58.551 47.619 13.35 0.00 0.00 3.27
1441 3588 1.479323 CCATGGCCAGGAAAACATCAG 59.521 52.381 21.32 0.00 0.00 2.90
1442 3589 1.559368 CCATGGCCAGGAAAACATCA 58.441 50.000 21.32 0.00 0.00 3.07
1443 3590 0.176449 GCCATGGCCAGGAAAACATC 59.824 55.000 27.24 0.00 34.56 3.06
1444 3591 0.544833 TGCCATGGCCAGGAAAACAT 60.545 50.000 33.44 0.00 41.09 2.71
1445 3592 1.152376 TGCCATGGCCAGGAAAACA 60.152 52.632 33.44 9.03 41.09 2.83
1446 3593 1.593265 CTGCCATGGCCAGGAAAAC 59.407 57.895 33.44 5.84 41.09 2.43
1447 3594 2.285024 GCTGCCATGGCCAGGAAAA 61.285 57.895 33.44 12.43 41.09 2.29
1448 3595 2.681064 GCTGCCATGGCCAGGAAA 60.681 61.111 33.44 13.22 41.09 3.13
1458 3605 2.277737 CTCCCACATGGCTGCCAT 59.722 61.111 27.95 27.95 46.37 4.40
1459 3606 4.051167 CCTCCCACATGGCTGCCA 62.051 66.667 25.65 25.65 38.19 4.92
1460 3607 4.828296 CCCTCCCACATGGCTGCC 62.828 72.222 12.87 12.87 0.00 4.85
1461 3608 3.711059 CTCCCTCCCACATGGCTGC 62.711 68.421 0.00 0.00 0.00 5.25
1462 3609 2.593978 CTCCCTCCCACATGGCTG 59.406 66.667 0.00 0.00 0.00 4.85
1463 3610 2.693864 CCTCCCTCCCACATGGCT 60.694 66.667 0.00 0.00 0.00 4.75
1464 3611 4.512914 GCCTCCCTCCCACATGGC 62.513 72.222 0.00 0.00 0.00 4.40
1465 3612 4.181010 CGCCTCCCTCCCACATGG 62.181 72.222 0.00 0.00 0.00 3.66
1466 3613 3.083349 TCGCCTCCCTCCCACATG 61.083 66.667 0.00 0.00 0.00 3.21
1467 3614 2.238319 TACTCGCCTCCCTCCCACAT 62.238 60.000 0.00 0.00 0.00 3.21
1468 3615 2.856039 CTACTCGCCTCCCTCCCACA 62.856 65.000 0.00 0.00 0.00 4.17
1469 3616 2.043248 TACTCGCCTCCCTCCCAC 60.043 66.667 0.00 0.00 0.00 4.61
1470 3617 2.164332 AACTACTCGCCTCCCTCCCA 62.164 60.000 0.00 0.00 0.00 4.37
1471 3618 0.106318 TAACTACTCGCCTCCCTCCC 60.106 60.000 0.00 0.00 0.00 4.30
1472 3619 1.320507 CTAACTACTCGCCTCCCTCC 58.679 60.000 0.00 0.00 0.00 4.30
1473 3620 0.669619 GCTAACTACTCGCCTCCCTC 59.330 60.000 0.00 0.00 0.00 4.30
1474 3621 0.033405 TGCTAACTACTCGCCTCCCT 60.033 55.000 0.00 0.00 0.00 4.20
1475 3622 1.041437 ATGCTAACTACTCGCCTCCC 58.959 55.000 0.00 0.00 0.00 4.30
1476 3623 2.229302 CCTATGCTAACTACTCGCCTCC 59.771 54.545 0.00 0.00 0.00 4.30
1477 3624 2.351932 GCCTATGCTAACTACTCGCCTC 60.352 54.545 0.00 0.00 33.53 4.70
1478 3625 1.614413 GCCTATGCTAACTACTCGCCT 59.386 52.381 0.00 0.00 33.53 5.52
1479 3626 1.336980 GGCCTATGCTAACTACTCGCC 60.337 57.143 0.00 0.00 37.74 5.54
1480 3627 1.614413 AGGCCTATGCTAACTACTCGC 59.386 52.381 1.29 0.00 37.74 5.03
1481 3628 3.553096 CCAAGGCCTATGCTAACTACTCG 60.553 52.174 5.16 0.00 37.74 4.18
1482 3629 3.244249 CCCAAGGCCTATGCTAACTACTC 60.244 52.174 5.16 0.00 37.74 2.59
1483 3630 2.706190 CCCAAGGCCTATGCTAACTACT 59.294 50.000 5.16 0.00 37.74 2.57
1484 3631 2.438392 ACCCAAGGCCTATGCTAACTAC 59.562 50.000 5.16 0.00 37.74 2.73
1485 3632 2.438021 CACCCAAGGCCTATGCTAACTA 59.562 50.000 5.16 0.00 37.74 2.24
1486 3633 1.212935 CACCCAAGGCCTATGCTAACT 59.787 52.381 5.16 0.00 37.74 2.24
1487 3634 1.680338 CACCCAAGGCCTATGCTAAC 58.320 55.000 5.16 0.00 37.74 2.34
1488 3635 0.550914 CCACCCAAGGCCTATGCTAA 59.449 55.000 5.16 0.00 37.74 3.09
1489 3636 2.230664 CCACCCAAGGCCTATGCTA 58.769 57.895 5.16 0.00 37.74 3.49
1490 3637 3.010144 CCACCCAAGGCCTATGCT 58.990 61.111 5.16 0.00 37.74 3.79
1498 3645 2.976494 AAACTCCACGCCACCCAAGG 62.976 60.000 0.00 0.00 0.00 3.61
1499 3646 1.106944 AAAACTCCACGCCACCCAAG 61.107 55.000 0.00 0.00 0.00 3.61
1500 3647 1.076632 AAAACTCCACGCCACCCAA 60.077 52.632 0.00 0.00 0.00 4.12
1501 3648 1.826054 CAAAACTCCACGCCACCCA 60.826 57.895 0.00 0.00 0.00 4.51
1502 3649 1.527380 TCAAAACTCCACGCCACCC 60.527 57.895 0.00 0.00 0.00 4.61
1503 3650 1.098712 TGTCAAAACTCCACGCCACC 61.099 55.000 0.00 0.00 0.00 4.61
1504 3651 0.951558 ATGTCAAAACTCCACGCCAC 59.048 50.000 0.00 0.00 0.00 5.01
1505 3652 0.950836 CATGTCAAAACTCCACGCCA 59.049 50.000 0.00 0.00 0.00 5.69
1506 3653 0.951558 ACATGTCAAAACTCCACGCC 59.048 50.000 0.00 0.00 0.00 5.68
1507 3654 2.604614 GGAACATGTCAAAACTCCACGC 60.605 50.000 0.00 0.00 0.00 5.34
1508 3655 2.878406 AGGAACATGTCAAAACTCCACG 59.122 45.455 13.21 0.00 0.00 4.94
1509 3656 3.550842 GCAGGAACATGTCAAAACTCCAC 60.551 47.826 13.21 2.95 0.00 4.02
1510 3657 2.622942 GCAGGAACATGTCAAAACTCCA 59.377 45.455 13.21 0.00 0.00 3.86
1511 3658 2.622942 TGCAGGAACATGTCAAAACTCC 59.377 45.455 0.00 0.63 0.00 3.85
1512 3659 3.988379 TGCAGGAACATGTCAAAACTC 57.012 42.857 0.00 0.00 0.00 3.01
1513 3660 4.247267 CATGCAGGAACATGTCAAAACT 57.753 40.909 0.00 0.00 42.05 2.66
1522 3669 2.304092 CATGCCTACATGCAGGAACAT 58.696 47.619 16.73 7.64 46.75 2.71
1523 3670 1.753930 CATGCCTACATGCAGGAACA 58.246 50.000 16.73 5.47 46.75 3.18
1532 3679 6.261603 CACAGATTTACATGACATGCCTACAT 59.738 38.462 15.49 0.39 36.79 2.29
1533 3680 5.585844 CACAGATTTACATGACATGCCTACA 59.414 40.000 15.49 0.00 0.00 2.74
1534 3681 5.008019 CCACAGATTTACATGACATGCCTAC 59.992 44.000 15.49 4.11 0.00 3.18
1535 3682 5.104569 TCCACAGATTTACATGACATGCCTA 60.105 40.000 15.49 0.00 0.00 3.93
1536 3683 3.949754 CCACAGATTTACATGACATGCCT 59.050 43.478 15.49 0.00 0.00 4.75
1537 3684 3.947196 TCCACAGATTTACATGACATGCC 59.053 43.478 15.49 0.54 0.00 4.40
1538 3685 4.637534 AGTCCACAGATTTACATGACATGC 59.362 41.667 15.49 0.00 0.00 4.06
1539 3686 6.748333 AAGTCCACAGATTTACATGACATG 57.252 37.500 14.02 14.02 0.00 3.21
1540 3687 6.151648 CCAAAGTCCACAGATTTACATGACAT 59.848 38.462 0.00 0.00 0.00 3.06
1541 3688 5.473162 CCAAAGTCCACAGATTTACATGACA 59.527 40.000 0.00 0.00 0.00 3.58
1542 3689 5.106157 CCCAAAGTCCACAGATTTACATGAC 60.106 44.000 0.00 0.00 0.00 3.06
1543 3690 5.009631 CCCAAAGTCCACAGATTTACATGA 58.990 41.667 0.00 0.00 0.00 3.07
1544 3691 4.158394 CCCCAAAGTCCACAGATTTACATG 59.842 45.833 0.00 0.00 0.00 3.21
1545 3692 4.202673 ACCCCAAAGTCCACAGATTTACAT 60.203 41.667 0.00 0.00 0.00 2.29
1546 3693 3.139397 ACCCCAAAGTCCACAGATTTACA 59.861 43.478 0.00 0.00 0.00 2.41
1547 3694 3.763057 ACCCCAAAGTCCACAGATTTAC 58.237 45.455 0.00 0.00 0.00 2.01
1548 3695 4.105697 AGAACCCCAAAGTCCACAGATTTA 59.894 41.667 0.00 0.00 0.00 1.40
1549 3696 3.117131 AGAACCCCAAAGTCCACAGATTT 60.117 43.478 0.00 0.00 0.00 2.17
1550 3697 2.447047 AGAACCCCAAAGTCCACAGATT 59.553 45.455 0.00 0.00 0.00 2.40
1551 3698 2.065799 AGAACCCCAAAGTCCACAGAT 58.934 47.619 0.00 0.00 0.00 2.90
1552 3699 1.518367 AGAACCCCAAAGTCCACAGA 58.482 50.000 0.00 0.00 0.00 3.41
1553 3700 2.364972 AAGAACCCCAAAGTCCACAG 57.635 50.000 0.00 0.00 0.00 3.66
1554 3701 2.661718 GAAAGAACCCCAAAGTCCACA 58.338 47.619 0.00 0.00 0.00 4.17
1555 3702 1.961394 GGAAAGAACCCCAAAGTCCAC 59.039 52.381 0.00 0.00 0.00 4.02
1556 3703 1.133294 GGGAAAGAACCCCAAAGTCCA 60.133 52.381 0.00 0.00 43.81 4.02
1557 3704 1.629043 GGGAAAGAACCCCAAAGTCC 58.371 55.000 0.00 0.00 43.81 3.85
1566 3713 3.223674 TGAAGAAGTGGGGAAAGAACC 57.776 47.619 0.00 0.00 0.00 3.62
1567 3714 8.624776 CATATATTGAAGAAGTGGGGAAAGAAC 58.375 37.037 0.00 0.00 0.00 3.01
1568 3715 8.556589 TCATATATTGAAGAAGTGGGGAAAGAA 58.443 33.333 0.00 0.00 0.00 2.52
1569 3716 8.101309 TCATATATTGAAGAAGTGGGGAAAGA 57.899 34.615 0.00 0.00 0.00 2.52
1570 3717 8.930846 ATCATATATTGAAGAAGTGGGGAAAG 57.069 34.615 0.00 0.00 38.03 2.62
1571 3718 9.793259 GTATCATATATTGAAGAAGTGGGGAAA 57.207 33.333 0.00 0.00 38.03 3.13
1572 3719 8.094548 CGTATCATATATTGAAGAAGTGGGGAA 58.905 37.037 0.00 0.00 38.03 3.97
1573 3720 7.611770 CGTATCATATATTGAAGAAGTGGGGA 58.388 38.462 0.00 0.00 38.03 4.81
1574 3721 6.313905 GCGTATCATATATTGAAGAAGTGGGG 59.686 42.308 0.00 0.00 38.03 4.96
1575 3722 6.873605 TGCGTATCATATATTGAAGAAGTGGG 59.126 38.462 0.00 0.00 38.03 4.61
1576 3723 7.384932 TGTGCGTATCATATATTGAAGAAGTGG 59.615 37.037 0.00 0.00 38.03 4.00
1577 3724 8.217115 GTGTGCGTATCATATATTGAAGAAGTG 58.783 37.037 0.00 0.00 38.03 3.16
1578 3725 8.144478 AGTGTGCGTATCATATATTGAAGAAGT 58.856 33.333 0.00 0.00 38.03 3.01
1579 3726 8.526218 AGTGTGCGTATCATATATTGAAGAAG 57.474 34.615 0.00 0.00 38.03 2.85
1580 3727 7.326063 CGAGTGTGCGTATCATATATTGAAGAA 59.674 37.037 0.00 0.00 38.03 2.52
1581 3728 6.801862 CGAGTGTGCGTATCATATATTGAAGA 59.198 38.462 0.00 0.00 38.03 2.87
1582 3729 6.582672 ACGAGTGTGCGTATCATATATTGAAG 59.417 38.462 0.00 0.00 43.61 3.02
1583 3730 6.362283 CACGAGTGTGCGTATCATATATTGAA 59.638 38.462 0.00 0.00 43.59 2.69
1584 3731 5.856455 CACGAGTGTGCGTATCATATATTGA 59.144 40.000 0.00 0.00 43.59 2.57
1585 3732 6.070846 CACGAGTGTGCGTATCATATATTG 57.929 41.667 0.00 0.00 43.59 1.90
1599 3746 0.907837 CTCGAATACGCACGAGTGTG 59.092 55.000 14.40 14.40 46.90 3.82
1600 3747 3.307829 CTCGAATACGCACGAGTGT 57.692 52.632 4.12 4.12 46.90 3.55
1656 3811 4.647424 GTGAACTCACACATCCCAAAAA 57.353 40.909 4.96 0.00 45.75 1.94
1718 3873 5.167303 ACAAAATCTAGGTCCAGAGTTCC 57.833 43.478 5.03 0.00 32.01 3.62
1728 3883 7.400052 AGCCCATATTTTCAACAAAATCTAGGT 59.600 33.333 0.00 0.00 40.69 3.08
1748 3903 3.421844 GAACAAAGGTAACAGAGCCCAT 58.578 45.455 0.00 0.00 41.41 4.00
1927 4082 5.489637 TCCCAATAGGCAAGGACTAAAGTAA 59.510 40.000 0.00 0.00 34.51 2.24
2099 4264 6.294120 CCATGATTGCACGGATGTTATACAAT 60.294 38.462 0.00 0.00 25.46 2.71
2128 4293 8.139350 CAGTATACGTCCATGTAATGTAAAGGA 58.861 37.037 0.00 0.00 44.81 3.36
2223 4388 4.739735 CTCCCGAAGAGAGAGACTAGTCTC 60.740 54.167 35.86 35.86 46.50 3.36
2312 4477 4.990426 ACCAAAACTGCATGAATTAGTTGC 59.010 37.500 0.00 0.95 35.06 4.17
2661 7042 5.364778 TGCAGTAAAACTTCTCAAGCACTA 58.635 37.500 0.00 0.00 0.00 2.74
2707 7088 9.924010 AGTATCTGATAAGAAGTACCTACAAGT 57.076 33.333 0.00 0.00 0.00 3.16
2783 7166 7.648039 TTTAAAGTGAGTTGCTCCCTTAAAA 57.352 32.000 0.00 0.00 28.79 1.52
2787 7170 5.201243 AGTTTTAAAGTGAGTTGCTCCCTT 58.799 37.500 0.00 0.00 29.98 3.95
2863 7247 7.338196 TCTCAAACAAAAGTTCACTCCACAATA 59.662 33.333 0.00 0.00 0.00 1.90
3075 7462 9.911788 TCAGAAGATAAAGGCAAAAGATTATCT 57.088 29.630 0.00 0.00 43.43 1.98
3166 7555 8.995027 ATATTAGTTTGATATGGGCACTCAAA 57.005 30.769 0.00 0.00 36.74 2.69
3196 7588 7.715686 ACCGACAGATAGGAAAGAAAATAATCC 59.284 37.037 0.00 0.00 0.00 3.01
3290 7685 1.076485 GCTGTGGCCCAAGGATGAT 60.076 57.895 0.00 0.00 0.00 2.45
3296 7691 2.113774 TGTGAGCTGTGGCCCAAG 59.886 61.111 0.00 0.00 39.73 3.61
3324 7719 8.458573 ACAAACTATTTGAGACCACACAATAA 57.541 30.769 8.24 0.00 43.26 1.40
3573 7975 8.400184 AGTATGTAACAACCAGTATATAGCGA 57.600 34.615 0.00 0.00 0.00 4.93
3579 7981 9.740239 GAATCGAAGTATGTAACAACCAGTATA 57.260 33.333 0.00 0.00 0.00 1.47
3581 7983 7.604549 TGAATCGAAGTATGTAACAACCAGTA 58.395 34.615 0.00 0.00 0.00 2.74
3592 7994 2.874701 GCATGCCTGAATCGAAGTATGT 59.125 45.455 6.36 0.00 0.00 2.29
4012 8461 9.871238 GAGTCACTCCTAATAGATTTTGTAACA 57.129 33.333 0.00 0.00 0.00 2.41
4041 8490 1.184431 TGGCGAACATCCGGTAGTTA 58.816 50.000 12.91 0.00 0.00 2.24
4043 8492 0.539986 ATTGGCGAACATCCGGTAGT 59.460 50.000 0.00 0.00 0.00 2.73
4048 8497 5.120208 CCTAGTAATTATTGGCGAACATCCG 59.880 44.000 0.00 0.00 0.00 4.18
4056 8505 7.849804 AATAGCATCCTAGTAATTATTGGCG 57.150 36.000 0.00 0.00 0.00 5.69
4058 8507 9.846248 GCAAAATAGCATCCTAGTAATTATTGG 57.154 33.333 0.00 0.00 0.00 3.16
4066 8515 5.217393 CGTACGCAAAATAGCATCCTAGTA 58.783 41.667 0.52 0.00 0.00 1.82
4067 8516 4.049186 CGTACGCAAAATAGCATCCTAGT 58.951 43.478 0.52 0.00 0.00 2.57
4069 8518 2.798283 GCGTACGCAAAATAGCATCCTA 59.202 45.455 33.90 0.00 41.49 2.94
4070 8519 1.597663 GCGTACGCAAAATAGCATCCT 59.402 47.619 33.90 0.00 41.49 3.24
4072 8521 2.540101 AGAGCGTACGCAAAATAGCATC 59.460 45.455 38.58 24.20 44.88 3.91
4073 8522 2.285220 CAGAGCGTACGCAAAATAGCAT 59.715 45.455 38.58 17.43 44.88 3.79
4074 8523 1.658596 CAGAGCGTACGCAAAATAGCA 59.341 47.619 38.58 0.00 44.88 3.49
4075 8524 1.659098 ACAGAGCGTACGCAAAATAGC 59.341 47.619 38.58 19.02 44.88 2.97
4076 8525 3.366724 TGAACAGAGCGTACGCAAAATAG 59.633 43.478 38.58 23.67 44.88 1.73
4082 8531 0.038618 ACATGAACAGAGCGTACGCA 60.039 50.000 38.58 19.16 44.88 5.24
4083 8532 0.366871 CACATGAACAGAGCGTACGC 59.633 55.000 32.17 32.17 42.33 4.42
4085 8534 1.126846 GTGCACATGAACAGAGCGTAC 59.873 52.381 13.17 0.00 0.00 3.67
4088 8537 0.587768 TTGTGCACATGAACAGAGCG 59.412 50.000 22.39 0.00 34.53 5.03
4115 8564 2.743538 GAGAGCACATGCCGCACA 60.744 61.111 10.09 0.00 43.38 4.57
4117 8566 2.435410 CTGAGAGCACATGCCGCA 60.435 61.111 10.09 0.00 43.38 5.69
4118 8567 0.740868 TAACTGAGAGCACATGCCGC 60.741 55.000 0.00 0.00 43.38 6.53
4119 8568 1.725641 TTAACTGAGAGCACATGCCG 58.274 50.000 0.00 0.00 43.38 5.69
4120 8569 4.708726 AAATTAACTGAGAGCACATGCC 57.291 40.909 0.00 0.00 43.38 4.40
4121 8570 5.947443 AGAAAATTAACTGAGAGCACATGC 58.053 37.500 0.00 0.00 42.49 4.06
4122 8571 7.587629 TCAAGAAAATTAACTGAGAGCACATG 58.412 34.615 0.00 0.00 0.00 3.21
4123 8572 7.750229 TCAAGAAAATTAACTGAGAGCACAT 57.250 32.000 0.00 0.00 0.00 3.21
4124 8573 7.498900 TCTTCAAGAAAATTAACTGAGAGCACA 59.501 33.333 0.00 0.00 0.00 4.57
4125 8574 7.865707 TCTTCAAGAAAATTAACTGAGAGCAC 58.134 34.615 0.00 0.00 0.00 4.40
4126 8575 7.716998 ACTCTTCAAGAAAATTAACTGAGAGCA 59.283 33.333 0.00 0.00 0.00 4.26
4139 8588 4.665833 TCGGTCAGACTCTTCAAGAAAA 57.334 40.909 0.00 0.00 0.00 2.29
4141 8590 4.280929 TCATTCGGTCAGACTCTTCAAGAA 59.719 41.667 0.00 0.00 0.00 2.52
4170 8619 1.450211 CAACGGAAGGTCTGTGGGT 59.550 57.895 0.00 0.00 35.86 4.51
4171 8620 1.966451 GCAACGGAAGGTCTGTGGG 60.966 63.158 0.00 0.00 35.86 4.61
4172 8621 1.227823 TGCAACGGAAGGTCTGTGG 60.228 57.895 0.00 0.00 35.86 4.17
4173 8622 0.813610 TGTGCAACGGAAGGTCTGTG 60.814 55.000 0.00 0.00 42.39 3.66
4174 8623 0.108585 ATGTGCAACGGAAGGTCTGT 59.891 50.000 0.00 0.00 42.39 3.41
4175 8624 0.798776 GATGTGCAACGGAAGGTCTG 59.201 55.000 0.00 0.00 42.39 3.51
4176 8625 0.687354 AGATGTGCAACGGAAGGTCT 59.313 50.000 0.00 0.00 42.39 3.85
4177 8626 1.079503 GAGATGTGCAACGGAAGGTC 58.920 55.000 0.00 0.00 42.39 3.85
4182 8631 1.899814 ACTAAGGAGATGTGCAACGGA 59.100 47.619 0.00 0.00 42.39 4.69
4190 8647 7.192852 ACTTCATTCATGACTAAGGAGATGT 57.807 36.000 12.90 1.45 36.36 3.06
4199 8656 4.092821 CGGCGAAAACTTCATTCATGACTA 59.907 41.667 0.00 0.00 36.36 2.59
4201 8658 3.163594 CGGCGAAAACTTCATTCATGAC 58.836 45.455 0.00 0.00 36.36 3.06
4202 8659 2.811431 ACGGCGAAAACTTCATTCATGA 59.189 40.909 16.62 0.00 34.44 3.07
4213 8670 3.249320 GGGGATATAAAGACGGCGAAAAC 59.751 47.826 16.62 1.68 0.00 2.43
4214 8671 3.118334 TGGGGATATAAAGACGGCGAAAA 60.118 43.478 16.62 0.00 0.00 2.29
4218 8675 1.607251 GGTGGGGATATAAAGACGGCG 60.607 57.143 4.80 4.80 0.00 6.46
4221 8678 3.072476 ACATGGGTGGGGATATAAAGACG 59.928 47.826 0.00 0.00 0.00 4.18
4223 8680 5.194740 TCAAACATGGGTGGGGATATAAAGA 59.805 40.000 0.00 0.00 0.00 2.52
4232 8689 0.405585 AGACTCAAACATGGGTGGGG 59.594 55.000 0.00 0.00 0.00 4.96
4233 8690 2.292828 AAGACTCAAACATGGGTGGG 57.707 50.000 0.00 0.00 0.00 4.61
4258 8715 8.491045 TGGTTTGATGACCTGATACTATCATA 57.509 34.615 0.00 0.00 40.47 2.15
4260 8717 6.806668 TGGTTTGATGACCTGATACTATCA 57.193 37.500 0.00 0.00 40.47 2.15
4265 8722 8.902540 TTGTATATGGTTTGATGACCTGATAC 57.097 34.615 9.82 9.82 40.47 2.24
4267 8724 9.730705 CTATTGTATATGGTTTGATGACCTGAT 57.269 33.333 0.00 0.00 40.47 2.90
4268 8725 8.713971 ACTATTGTATATGGTTTGATGACCTGA 58.286 33.333 0.00 0.00 40.47 3.86
4269 8726 8.777413 CACTATTGTATATGGTTTGATGACCTG 58.223 37.037 0.00 0.00 40.47 4.00
4270 8727 8.713971 TCACTATTGTATATGGTTTGATGACCT 58.286 33.333 0.00 0.00 40.47 3.85
4271 8728 8.902540 TCACTATTGTATATGGTTTGATGACC 57.097 34.615 0.00 0.00 40.23 4.02
4272 8729 8.993121 CCTCACTATTGTATATGGTTTGATGAC 58.007 37.037 0.00 0.00 0.00 3.06
4301 8758 2.742774 CTTTGGCAGTTTGGCTGTTAC 58.257 47.619 4.25 0.00 46.64 2.50
4304 8761 1.329171 TGCTTTGGCAGTTTGGCTGT 61.329 50.000 4.25 0.00 46.64 4.40
4482 20130 0.037975 GCCAGGGCACAAGAACAATG 60.038 55.000 5.20 0.00 41.49 2.82
4605 20253 1.672145 GGGTGTACCGAAGCACTTCTC 60.672 57.143 8.65 0.00 37.44 2.87
4606 20254 0.320697 GGGTGTACCGAAGCACTTCT 59.679 55.000 8.65 0.00 37.44 2.85
4607 20255 0.672711 GGGGTGTACCGAAGCACTTC 60.673 60.000 0.07 0.07 41.60 3.01
4608 20256 1.373812 GGGGTGTACCGAAGCACTT 59.626 57.895 0.00 0.00 41.60 3.16
4609 20257 2.590114 GGGGGTGTACCGAAGCACT 61.590 63.158 0.00 0.00 41.60 4.40
4610 20258 2.046604 GGGGGTGTACCGAAGCAC 60.047 66.667 0.00 0.00 41.60 4.40
4624 20272 7.634671 AAACTTTATACGTTTTATGAGGGGG 57.365 36.000 0.00 0.00 30.93 5.40
4625 20273 8.517056 ACAAAACTTTATACGTTTTATGAGGGG 58.483 33.333 0.00 2.61 41.24 4.79
4636 20284 9.260002 CCGGGTATTATACAAAACTTTATACGT 57.740 33.333 4.67 0.00 0.00 3.57
4637 20285 8.223100 GCCGGGTATTATACAAAACTTTATACG 58.777 37.037 2.18 0.00 0.00 3.06
4638 20286 8.223100 CGCCGGGTATTATACAAAACTTTATAC 58.777 37.037 2.18 0.00 0.00 1.47
4639 20287 8.147058 TCGCCGGGTATTATACAAAACTTTATA 58.853 33.333 2.18 0.00 0.00 0.98
4640 20288 6.991531 TCGCCGGGTATTATACAAAACTTTAT 59.008 34.615 2.18 0.00 0.00 1.40
4641 20289 6.344500 TCGCCGGGTATTATACAAAACTTTA 58.656 36.000 2.18 0.00 0.00 1.85
4642 20290 5.184711 TCGCCGGGTATTATACAAAACTTT 58.815 37.500 2.18 0.00 0.00 2.66
4643 20291 4.768583 TCGCCGGGTATTATACAAAACTT 58.231 39.130 2.18 0.00 0.00 2.66
4644 20292 4.405116 TCGCCGGGTATTATACAAAACT 57.595 40.909 2.18 0.00 0.00 2.66
4645 20293 4.332268 TGTTCGCCGGGTATTATACAAAAC 59.668 41.667 2.18 0.85 0.00 2.43
4646 20294 4.511527 TGTTCGCCGGGTATTATACAAAA 58.488 39.130 2.18 0.00 0.00 2.44
4647 20295 4.121317 CTGTTCGCCGGGTATTATACAAA 58.879 43.478 2.18 0.00 0.00 2.83
4648 20296 3.719924 CTGTTCGCCGGGTATTATACAA 58.280 45.455 2.18 0.00 0.00 2.41
4649 20297 2.546373 GCTGTTCGCCGGGTATTATACA 60.546 50.000 2.18 0.00 0.00 2.29
4650 20298 2.064014 GCTGTTCGCCGGGTATTATAC 58.936 52.381 2.18 0.00 0.00 1.47
4651 20299 2.443887 GCTGTTCGCCGGGTATTATA 57.556 50.000 2.18 0.00 0.00 0.98
4652 20300 3.300711 GCTGTTCGCCGGGTATTAT 57.699 52.632 2.18 0.00 0.00 1.28
4653 20301 4.840168 GCTGTTCGCCGGGTATTA 57.160 55.556 2.18 0.00 0.00 0.98
4662 20310 3.089784 CGTACATGGGCTGTTCGC 58.910 61.111 0.00 0.00 40.88 4.70
4664 20312 3.636282 AAAAACGTACATGGGCTGTTC 57.364 42.857 0.00 0.00 39.39 3.18
4701 20349 2.568509 CCAGTTGAGGGCATCCATTTTT 59.431 45.455 0.00 0.00 34.83 1.94
4702 20350 2.181975 CCAGTTGAGGGCATCCATTTT 58.818 47.619 0.00 0.00 34.83 1.82
4703 20351 1.358787 TCCAGTTGAGGGCATCCATTT 59.641 47.619 0.00 0.00 34.83 2.32
4704 20352 1.002069 TCCAGTTGAGGGCATCCATT 58.998 50.000 0.00 0.00 34.83 3.16
4705 20353 1.229131 ATCCAGTTGAGGGCATCCAT 58.771 50.000 0.00 0.00 34.83 3.41
4706 20354 1.002069 AATCCAGTTGAGGGCATCCA 58.998 50.000 0.00 0.00 34.83 3.41
4707 20355 1.685148 GAATCCAGTTGAGGGCATCC 58.315 55.000 0.00 0.00 0.00 3.51
4708 20356 1.134401 TCGAATCCAGTTGAGGGCATC 60.134 52.381 0.00 0.00 0.00 3.91
4709 20357 0.911769 TCGAATCCAGTTGAGGGCAT 59.088 50.000 0.00 0.00 0.00 4.40
4710 20358 0.690192 TTCGAATCCAGTTGAGGGCA 59.310 50.000 0.00 0.00 0.00 5.36
4711 20359 1.087501 GTTCGAATCCAGTTGAGGGC 58.912 55.000 0.00 0.00 0.00 5.19
4712 20360 1.003118 TGGTTCGAATCCAGTTGAGGG 59.997 52.381 5.84 0.00 0.00 4.30
4713 20361 2.076863 GTGGTTCGAATCCAGTTGAGG 58.923 52.381 16.54 0.00 35.49 3.86
4714 20362 2.738846 CTGTGGTTCGAATCCAGTTGAG 59.261 50.000 16.54 8.95 35.49 3.02
4715 20363 2.766313 CTGTGGTTCGAATCCAGTTGA 58.234 47.619 16.54 4.56 35.49 3.18
4716 20364 1.197721 GCTGTGGTTCGAATCCAGTTG 59.802 52.381 20.76 14.05 35.49 3.16
4717 20365 1.523758 GCTGTGGTTCGAATCCAGTT 58.476 50.000 20.76 0.00 35.49 3.16
4718 20366 0.321653 GGCTGTGGTTCGAATCCAGT 60.322 55.000 20.76 0.00 35.49 4.00
4719 20367 1.026718 GGGCTGTGGTTCGAATCCAG 61.027 60.000 17.56 17.56 35.49 3.86
4720 20368 1.002624 GGGCTGTGGTTCGAATCCA 60.003 57.895 5.84 10.38 0.00 3.41
4721 20369 1.749258 GGGGCTGTGGTTCGAATCC 60.749 63.158 5.84 7.81 0.00 3.01
4722 20370 1.749258 GGGGGCTGTGGTTCGAATC 60.749 63.158 0.00 0.00 0.00 2.52
4723 20371 2.355115 GGGGGCTGTGGTTCGAAT 59.645 61.111 0.00 0.00 0.00 3.34
4724 20372 3.172106 TGGGGGCTGTGGTTCGAA 61.172 61.111 0.00 0.00 0.00 3.71
4725 20373 3.948719 GTGGGGGCTGTGGTTCGA 61.949 66.667 0.00 0.00 0.00 3.71
4751 20399 1.295357 CGGATGGTTTGTGCGCTACA 61.295 55.000 9.73 8.88 37.56 2.74
4752 20400 1.423845 CGGATGGTTTGTGCGCTAC 59.576 57.895 9.73 5.95 0.00 3.58
4753 20401 1.743623 CCGGATGGTTTGTGCGCTA 60.744 57.895 9.73 0.00 0.00 4.26
4754 20402 3.055719 CCGGATGGTTTGTGCGCT 61.056 61.111 9.73 0.00 0.00 5.92
4755 20403 4.114997 CCCGGATGGTTTGTGCGC 62.115 66.667 0.73 0.00 0.00 6.09
4756 20404 2.359354 TCCCGGATGGTTTGTGCG 60.359 61.111 0.73 0.00 34.77 5.34
4757 20405 1.175983 TTGTCCCGGATGGTTTGTGC 61.176 55.000 0.73 0.00 34.77 4.57
4758 20406 0.596082 GTTGTCCCGGATGGTTTGTG 59.404 55.000 0.73 0.00 34.77 3.33
4759 20407 0.183971 TGTTGTCCCGGATGGTTTGT 59.816 50.000 0.73 0.00 34.77 2.83
4760 20408 1.323412 TTGTTGTCCCGGATGGTTTG 58.677 50.000 0.73 0.00 34.77 2.93
4761 20409 2.074729 TTTGTTGTCCCGGATGGTTT 57.925 45.000 0.73 0.00 34.77 3.27
4762 20410 2.167662 GATTTGTTGTCCCGGATGGTT 58.832 47.619 0.73 0.00 34.77 3.67
4763 20411 1.074727 TGATTTGTTGTCCCGGATGGT 59.925 47.619 0.73 0.00 34.77 3.55
4764 20412 1.745087 CTGATTTGTTGTCCCGGATGG 59.255 52.381 0.73 0.00 0.00 3.51
4765 20413 2.710377 TCTGATTTGTTGTCCCGGATG 58.290 47.619 0.73 0.00 0.00 3.51
4766 20414 3.652057 ATCTGATTTGTTGTCCCGGAT 57.348 42.857 0.73 0.00 0.00 4.18
4767 20415 3.433306 AATCTGATTTGTTGTCCCGGA 57.567 42.857 0.73 0.00 0.00 5.14
4768 20416 3.836949 CAAATCTGATTTGTTGTCCCGG 58.163 45.455 27.11 0.00 43.47 5.73
4778 20426 5.221581 ACAAGCAGGAAAGCAAATCTGATTT 60.222 36.000 9.76 9.76 43.69 2.17
4779 20427 4.282703 ACAAGCAGGAAAGCAAATCTGATT 59.717 37.500 0.00 0.00 36.46 2.57
4780 20428 3.830755 ACAAGCAGGAAAGCAAATCTGAT 59.169 39.130 0.00 0.00 36.85 2.90
4781 20429 3.225104 ACAAGCAGGAAAGCAAATCTGA 58.775 40.909 0.00 0.00 36.85 3.27
4782 20430 3.655276 ACAAGCAGGAAAGCAAATCTG 57.345 42.857 0.00 0.00 36.85 2.90
4783 20431 4.677673 AAACAAGCAGGAAAGCAAATCT 57.322 36.364 0.00 0.00 36.85 2.40
4784 20432 5.050567 CAGAAAACAAGCAGGAAAGCAAATC 60.051 40.000 0.00 0.00 36.85 2.17
4785 20433 4.812626 CAGAAAACAAGCAGGAAAGCAAAT 59.187 37.500 0.00 0.00 36.85 2.32
4786 20434 4.081752 TCAGAAAACAAGCAGGAAAGCAAA 60.082 37.500 0.00 0.00 36.85 3.68
4787 20435 3.446873 TCAGAAAACAAGCAGGAAAGCAA 59.553 39.130 0.00 0.00 36.85 3.91
4788 20436 3.023119 TCAGAAAACAAGCAGGAAAGCA 58.977 40.909 0.00 0.00 36.85 3.91
4789 20437 3.715628 TCAGAAAACAAGCAGGAAAGC 57.284 42.857 0.00 0.00 0.00 3.51
4790 20438 5.594926 ACAATCAGAAAACAAGCAGGAAAG 58.405 37.500 0.00 0.00 0.00 2.62
4791 20439 5.596836 ACAATCAGAAAACAAGCAGGAAA 57.403 34.783 0.00 0.00 0.00 3.13
4792 20440 5.105392 ACAACAATCAGAAAACAAGCAGGAA 60.105 36.000 0.00 0.00 0.00 3.36
4793 20441 4.402155 ACAACAATCAGAAAACAAGCAGGA 59.598 37.500 0.00 0.00 0.00 3.86
4794 20442 4.685924 ACAACAATCAGAAAACAAGCAGG 58.314 39.130 0.00 0.00 0.00 4.85
4795 20443 4.741676 GGACAACAATCAGAAAACAAGCAG 59.258 41.667 0.00 0.00 0.00 4.24
4796 20444 4.441356 GGGACAACAATCAGAAAACAAGCA 60.441 41.667 0.00 0.00 0.00 3.91
4797 20445 4.051237 GGGACAACAATCAGAAAACAAGC 58.949 43.478 0.00 0.00 0.00 4.01
4798 20446 4.099266 TGGGGACAACAATCAGAAAACAAG 59.901 41.667 0.00 0.00 37.44 3.16
4799 20447 4.026744 TGGGGACAACAATCAGAAAACAA 58.973 39.130 0.00 0.00 37.44 2.83
4800 20448 3.636679 TGGGGACAACAATCAGAAAACA 58.363 40.909 0.00 0.00 37.44 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.