Multiple sequence alignment - TraesCS3D01G391000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G391000 chr3D 100.000 4079 0 0 1 4079 506012140 506008062 0.000000e+00 7533.0
1 TraesCS3D01G391000 chr3D 97.712 306 7 0 368 673 100400516 100400821 1.000000e-145 527.0
2 TraesCS3D01G391000 chr3D 97.377 305 8 0 369 673 12369084 12368780 1.680000e-143 520.0
3 TraesCS3D01G391000 chr3A 95.496 1754 62 5 2339 4079 644680705 644678956 0.000000e+00 2785.0
4 TraesCS3D01G391000 chr3A 94.433 1509 67 6 839 2339 644682328 644680829 0.000000e+00 2305.0
5 TraesCS3D01G391000 chr3B 90.010 1001 86 11 3083 4079 667717460 667716470 0.000000e+00 1282.0
6 TraesCS3D01G391000 chr3B 92.190 717 43 4 838 1549 667719478 667718770 0.000000e+00 1002.0
7 TraesCS3D01G391000 chr3B 85.161 465 49 10 2626 3084 667717973 667717523 3.720000e-125 459.0
8 TraesCS3D01G391000 chr3B 88.800 250 24 3 1610 1859 667718769 667718524 1.840000e-78 303.0
9 TraesCS3D01G391000 chr3B 79.625 427 57 15 1930 2331 667718491 667718070 3.100000e-71 279.0
10 TraesCS3D01G391000 chr2D 97.394 307 7 1 369 674 591307405 591307099 4.670000e-144 521.0
11 TraesCS3D01G391000 chr2D 97.078 308 8 1 368 674 516860640 516860947 6.040000e-143 518.0
12 TraesCS3D01G391000 chr5D 96.474 312 10 1 362 673 415748683 415748993 7.820000e-142 514.0
13 TraesCS3D01G391000 chr5D 96.721 305 10 0 369 673 543670716 543671020 3.640000e-140 508.0
14 TraesCS3D01G391000 chr7D 96.721 305 10 0 369 673 109361497 109361801 3.640000e-140 508.0
15 TraesCS3D01G391000 chr6D 96.711 304 10 0 370 673 345048740 345048437 1.310000e-139 507.0
16 TraesCS3D01G391000 chr4A 95.541 314 13 1 367 679 572708412 572708725 6.090000e-138 501.0
17 TraesCS3D01G391000 chr7B 83.908 87 11 3 2384 2468 181409928 181410013 3.380000e-11 80.5
18 TraesCS3D01G391000 chr5A 94.286 35 0 2 2374 2407 260333464 260333497 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G391000 chr3D 506008062 506012140 4078 True 7533 7533 100.0000 1 4079 1 chr3D.!!$R2 4078
1 TraesCS3D01G391000 chr3A 644678956 644682328 3372 True 2545 2785 94.9645 839 4079 2 chr3A.!!$R1 3240
2 TraesCS3D01G391000 chr3B 667716470 667719478 3008 True 665 1282 87.1572 838 4079 5 chr3B.!!$R1 3241

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
476 477 0.033601 ATGAGCACCTCCGAGAGACT 60.034 55.0 0.00 0.0 0.00 3.24 F
786 787 0.035739 TACGCTTTCCCCTGTGGTTC 59.964 55.0 0.00 0.0 34.77 3.62 F
799 800 0.163788 GTGGTTCGCGTCATCTGTTG 59.836 55.0 5.77 0.0 0.00 3.33 F
806 807 0.179240 GCGTCATCTGTTGCGTTCAG 60.179 55.0 0.00 0.0 0.00 3.02 F
2335 2368 0.389426 GTCTCACCGCTTTCGCCTTA 60.389 55.0 0.00 0.0 0.00 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1383 1392 1.080501 CAGAGAGCTCGGTTTCGCA 60.081 57.895 8.37 0.0 36.13 5.10 R
2706 2880 1.677576 TGCTCACCTGCAAGAAAACAG 59.322 47.619 0.00 0.0 40.29 3.16 R
2851 3025 3.559655 CACTGAACGATGAAACCTCAACA 59.440 43.478 0.00 0.0 34.49 3.33 R
2997 3177 1.906105 AACACGGGGCACATACGGAT 61.906 55.000 0.00 0.0 0.00 4.18 R
3623 3871 0.679505 AGTAAGGTGCGAGAAGTGCA 59.320 50.000 0.00 0.0 40.70 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 8.706322 ACAGTATGGGAATTTATTTATCCACC 57.294 34.615 0.00 0.00 43.62 4.61
27 28 8.511126 ACAGTATGGGAATTTATTTATCCACCT 58.489 33.333 0.00 0.00 43.62 4.00
28 29 9.367160 CAGTATGGGAATTTATTTATCCACCTT 57.633 33.333 0.00 0.00 34.82 3.50
32 33 9.951866 ATGGGAATTTATTTATCCACCTTAGTT 57.048 29.630 0.00 0.00 34.82 2.24
33 34 9.777008 TGGGAATTTATTTATCCACCTTAGTTT 57.223 29.630 0.00 0.00 34.82 2.66
37 38 9.884636 AATTTATTTATCCACCTTAGTTTTGCC 57.115 29.630 0.00 0.00 0.00 4.52
38 39 8.423906 TTTATTTATCCACCTTAGTTTTGCCA 57.576 30.769 0.00 0.00 0.00 4.92
39 40 6.926630 ATTTATCCACCTTAGTTTTGCCAA 57.073 33.333 0.00 0.00 0.00 4.52
40 41 6.732896 TTTATCCACCTTAGTTTTGCCAAA 57.267 33.333 0.00 0.00 0.00 3.28
41 42 6.732896 TTATCCACCTTAGTTTTGCCAAAA 57.267 33.333 0.00 0.00 0.00 2.44
56 57 7.913674 TTTGCCAAAACAAATTAAACTGAGT 57.086 28.000 0.00 0.00 34.68 3.41
57 58 7.913674 TTGCCAAAACAAATTAAACTGAGTT 57.086 28.000 0.00 0.00 0.00 3.01
58 59 7.532682 TGCCAAAACAAATTAAACTGAGTTC 57.467 32.000 0.00 0.00 0.00 3.01
59 60 7.327214 TGCCAAAACAAATTAAACTGAGTTCT 58.673 30.769 0.00 0.00 0.00 3.01
60 61 8.470805 TGCCAAAACAAATTAAACTGAGTTCTA 58.529 29.630 0.00 0.00 0.00 2.10
61 62 9.308318 GCCAAAACAAATTAAACTGAGTTCTAA 57.692 29.630 0.00 0.76 0.00 2.10
85 86 5.462530 AAACAACTAAAATGCCAGGTACC 57.537 39.130 2.73 2.73 0.00 3.34
86 87 4.107127 ACAACTAAAATGCCAGGTACCA 57.893 40.909 15.94 0.00 0.00 3.25
87 88 4.475345 ACAACTAAAATGCCAGGTACCAA 58.525 39.130 15.94 0.00 0.00 3.67
88 89 4.896482 ACAACTAAAATGCCAGGTACCAAA 59.104 37.500 15.94 0.00 0.00 3.28
89 90 5.364157 ACAACTAAAATGCCAGGTACCAAAA 59.636 36.000 15.94 0.00 0.00 2.44
90 91 5.722021 ACTAAAATGCCAGGTACCAAAAG 57.278 39.130 15.94 0.10 0.00 2.27
91 92 5.144832 ACTAAAATGCCAGGTACCAAAAGT 58.855 37.500 15.94 1.44 0.00 2.66
92 93 5.600898 ACTAAAATGCCAGGTACCAAAAGTT 59.399 36.000 15.94 0.20 0.00 2.66
93 94 5.366482 AAAATGCCAGGTACCAAAAGTTT 57.634 34.783 15.94 6.72 0.00 2.66
94 95 4.600692 AATGCCAGGTACCAAAAGTTTC 57.399 40.909 15.94 0.00 0.00 2.78
95 96 3.019799 TGCCAGGTACCAAAAGTTTCA 57.980 42.857 15.94 0.00 0.00 2.69
96 97 3.571590 TGCCAGGTACCAAAAGTTTCAT 58.428 40.909 15.94 0.00 0.00 2.57
97 98 3.320541 TGCCAGGTACCAAAAGTTTCATG 59.679 43.478 15.94 0.00 0.00 3.07
98 99 3.306019 GCCAGGTACCAAAAGTTTCATGG 60.306 47.826 15.94 9.81 40.16 3.66
99 100 4.148838 CCAGGTACCAAAAGTTTCATGGA 58.851 43.478 15.94 0.00 36.09 3.41
100 101 4.586841 CCAGGTACCAAAAGTTTCATGGAA 59.413 41.667 15.94 0.00 36.09 3.53
101 102 5.245977 CCAGGTACCAAAAGTTTCATGGAAT 59.754 40.000 15.94 0.00 36.09 3.01
103 104 5.245977 AGGTACCAAAAGTTTCATGGAATGG 59.754 40.000 15.94 6.09 46.73 3.16
104 105 4.006780 ACCAAAAGTTTCATGGAATGGC 57.993 40.909 12.37 0.00 46.73 4.40
105 106 3.390639 ACCAAAAGTTTCATGGAATGGCA 59.609 39.130 12.37 0.00 46.73 4.92
106 107 4.141528 ACCAAAAGTTTCATGGAATGGCAA 60.142 37.500 12.37 0.00 46.73 4.52
107 108 4.453136 CCAAAAGTTTCATGGAATGGCAAG 59.547 41.667 0.61 0.00 46.73 4.01
108 109 4.961438 AAAGTTTCATGGAATGGCAAGT 57.039 36.364 0.00 0.00 46.73 3.16
109 110 4.525912 AAGTTTCATGGAATGGCAAGTC 57.474 40.909 0.00 0.00 46.73 3.01
110 111 3.499338 AGTTTCATGGAATGGCAAGTCA 58.501 40.909 0.00 0.00 46.73 3.41
111 112 3.896888 AGTTTCATGGAATGGCAAGTCAA 59.103 39.130 0.00 0.00 46.73 3.18
112 113 4.529377 AGTTTCATGGAATGGCAAGTCAAT 59.471 37.500 0.00 0.00 46.73 2.57
113 114 4.459390 TTCATGGAATGGCAAGTCAATG 57.541 40.909 11.06 11.06 46.73 2.82
114 115 3.699413 TCATGGAATGGCAAGTCAATGA 58.301 40.909 14.49 14.49 46.73 2.57
115 116 4.087907 TCATGGAATGGCAAGTCAATGAA 58.912 39.130 15.60 4.15 46.73 2.57
116 117 3.940209 TGGAATGGCAAGTCAATGAAC 57.060 42.857 0.00 0.00 0.00 3.18
117 118 3.499338 TGGAATGGCAAGTCAATGAACT 58.501 40.909 0.00 0.00 0.00 3.01
118 119 3.896888 TGGAATGGCAAGTCAATGAACTT 59.103 39.130 0.00 0.00 40.08 2.66
119 120 7.556006 CATGGAATGGCAAGTCAATGAACTTG 61.556 42.308 11.65 15.99 45.86 3.16
120 121 9.822332 CATGGAATGGCAAGTCAATGAACTTGT 62.822 40.741 19.10 6.72 45.39 3.16
131 132 9.747898 AAGTCAATGAACTTGTATACCCATAAA 57.252 29.630 0.00 0.00 38.06 1.40
132 133 9.920946 AGTCAATGAACTTGTATACCCATAAAT 57.079 29.630 0.00 0.00 36.20 1.40
133 134 9.950680 GTCAATGAACTTGTATACCCATAAATG 57.049 33.333 0.00 0.00 36.20 2.32
134 135 9.130661 TCAATGAACTTGTATACCCATAAATGG 57.869 33.333 0.00 1.72 40.51 3.16
184 185 9.522804 TCATTTGACCAAAACTTAAATGTACAC 57.477 29.630 0.00 0.00 38.91 2.90
185 186 8.760569 CATTTGACCAAAACTTAAATGTACACC 58.239 33.333 0.00 0.00 35.25 4.16
186 187 6.394025 TGACCAAAACTTAAATGTACACCC 57.606 37.500 0.00 0.00 0.00 4.61
187 188 6.130569 TGACCAAAACTTAAATGTACACCCT 58.869 36.000 0.00 0.00 0.00 4.34
188 189 6.263617 TGACCAAAACTTAAATGTACACCCTC 59.736 38.462 0.00 0.00 0.00 4.30
189 190 5.537295 ACCAAAACTTAAATGTACACCCTCC 59.463 40.000 0.00 0.00 0.00 4.30
190 191 5.536916 CCAAAACTTAAATGTACACCCTCCA 59.463 40.000 0.00 0.00 0.00 3.86
191 192 6.210584 CCAAAACTTAAATGTACACCCTCCAT 59.789 38.462 0.00 0.00 0.00 3.41
192 193 7.312899 CAAAACTTAAATGTACACCCTCCATC 58.687 38.462 0.00 0.00 0.00 3.51
193 194 5.112129 ACTTAAATGTACACCCTCCATCC 57.888 43.478 0.00 0.00 0.00 3.51
194 195 4.788617 ACTTAAATGTACACCCTCCATCCT 59.211 41.667 0.00 0.00 0.00 3.24
195 196 5.968167 ACTTAAATGTACACCCTCCATCCTA 59.032 40.000 0.00 0.00 0.00 2.94
196 197 6.445786 ACTTAAATGTACACCCTCCATCCTAA 59.554 38.462 0.00 0.00 0.00 2.69
197 198 5.789574 AAATGTACACCCTCCATCCTAAA 57.210 39.130 0.00 0.00 0.00 1.85
198 199 5.789574 AATGTACACCCTCCATCCTAAAA 57.210 39.130 0.00 0.00 0.00 1.52
199 200 5.994416 ATGTACACCCTCCATCCTAAAAT 57.006 39.130 0.00 0.00 0.00 1.82
200 201 7.460214 AATGTACACCCTCCATCCTAAAATA 57.540 36.000 0.00 0.00 0.00 1.40
201 202 6.894735 TGTACACCCTCCATCCTAAAATAA 57.105 37.500 0.00 0.00 0.00 1.40
202 203 6.895782 TGTACACCCTCCATCCTAAAATAAG 58.104 40.000 0.00 0.00 0.00 1.73
203 204 6.445786 TGTACACCCTCCATCCTAAAATAAGT 59.554 38.462 0.00 0.00 0.00 2.24
204 205 5.755849 ACACCCTCCATCCTAAAATAAGTG 58.244 41.667 0.00 0.00 0.00 3.16
205 206 5.491078 ACACCCTCCATCCTAAAATAAGTGA 59.509 40.000 0.00 0.00 0.00 3.41
206 207 5.823045 CACCCTCCATCCTAAAATAAGTGAC 59.177 44.000 0.00 0.00 0.00 3.67
207 208 5.057149 CCCTCCATCCTAAAATAAGTGACG 58.943 45.833 0.00 0.00 0.00 4.35
208 209 5.396436 CCCTCCATCCTAAAATAAGTGACGT 60.396 44.000 0.00 0.00 0.00 4.34
209 210 5.523916 CCTCCATCCTAAAATAAGTGACGTG 59.476 44.000 0.00 0.00 0.00 4.49
210 211 6.045072 TCCATCCTAAAATAAGTGACGTGT 57.955 37.500 0.00 0.00 0.00 4.49
211 212 7.172868 TCCATCCTAAAATAAGTGACGTGTA 57.827 36.000 0.00 0.00 0.00 2.90
212 213 7.037438 TCCATCCTAAAATAAGTGACGTGTAC 58.963 38.462 0.00 0.00 0.00 2.90
213 214 6.814644 CCATCCTAAAATAAGTGACGTGTACA 59.185 38.462 0.00 0.00 0.00 2.90
214 215 7.494625 CCATCCTAAAATAAGTGACGTGTACAT 59.505 37.037 0.00 0.00 0.00 2.29
215 216 8.540492 CATCCTAAAATAAGTGACGTGTACATC 58.460 37.037 0.00 0.00 0.00 3.06
216 217 7.833786 TCCTAAAATAAGTGACGTGTACATCT 58.166 34.615 0.00 0.00 0.00 2.90
217 218 8.308931 TCCTAAAATAAGTGACGTGTACATCTT 58.691 33.333 0.00 2.65 0.00 2.40
218 219 9.577110 CCTAAAATAAGTGACGTGTACATCTTA 57.423 33.333 0.00 4.69 0.00 2.10
222 223 8.798748 AATAAGTGACGTGTACATCTTATAGC 57.201 34.615 0.00 0.00 31.00 2.97
223 224 6.452494 AAGTGACGTGTACATCTTATAGCT 57.548 37.500 0.00 0.00 0.00 3.32
224 225 6.062434 AGTGACGTGTACATCTTATAGCTC 57.938 41.667 0.00 0.00 0.00 4.09
225 226 5.008811 AGTGACGTGTACATCTTATAGCTCC 59.991 44.000 0.00 0.00 0.00 4.70
226 227 5.008811 GTGACGTGTACATCTTATAGCTCCT 59.991 44.000 0.00 0.00 0.00 3.69
227 228 5.238868 TGACGTGTACATCTTATAGCTCCTC 59.761 44.000 0.00 0.00 0.00 3.71
228 229 4.213694 ACGTGTACATCTTATAGCTCCTCG 59.786 45.833 0.00 0.00 0.00 4.63
229 230 4.378563 CGTGTACATCTTATAGCTCCTCGG 60.379 50.000 0.00 0.00 0.00 4.63
230 231 4.079970 TGTACATCTTATAGCTCCTCGGG 58.920 47.826 0.00 0.00 0.00 5.14
231 232 3.527507 ACATCTTATAGCTCCTCGGGA 57.472 47.619 0.00 0.00 0.00 5.14
232 233 3.845860 ACATCTTATAGCTCCTCGGGAA 58.154 45.455 0.00 0.00 0.00 3.97
233 234 4.223953 ACATCTTATAGCTCCTCGGGAAA 58.776 43.478 0.00 0.00 0.00 3.13
234 235 4.282195 ACATCTTATAGCTCCTCGGGAAAG 59.718 45.833 0.00 0.00 0.00 2.62
235 236 3.231818 TCTTATAGCTCCTCGGGAAAGG 58.768 50.000 0.00 0.00 37.81 3.11
236 237 3.117246 TCTTATAGCTCCTCGGGAAAGGA 60.117 47.826 0.00 0.00 43.30 3.36
237 238 2.176247 ATAGCTCCTCGGGAAAGGAA 57.824 50.000 0.00 0.00 44.81 3.36
238 239 1.946984 TAGCTCCTCGGGAAAGGAAA 58.053 50.000 0.00 0.00 44.81 3.13
239 240 1.064825 AGCTCCTCGGGAAAGGAAAA 58.935 50.000 0.00 0.00 44.81 2.29
240 241 1.636003 AGCTCCTCGGGAAAGGAAAAT 59.364 47.619 0.00 0.00 44.81 1.82
241 242 2.041755 AGCTCCTCGGGAAAGGAAAATT 59.958 45.455 0.00 0.00 44.81 1.82
242 243 3.265995 AGCTCCTCGGGAAAGGAAAATTA 59.734 43.478 0.00 0.00 44.81 1.40
243 244 3.628032 GCTCCTCGGGAAAGGAAAATTAG 59.372 47.826 0.00 0.00 44.81 1.73
244 245 3.617284 TCCTCGGGAAAGGAAAATTAGC 58.383 45.455 0.00 0.00 42.56 3.09
245 246 3.009695 TCCTCGGGAAAGGAAAATTAGCA 59.990 43.478 0.00 0.00 42.56 3.49
246 247 3.954258 CCTCGGGAAAGGAAAATTAGCAT 59.046 43.478 0.00 0.00 38.87 3.79
247 248 4.036852 CCTCGGGAAAGGAAAATTAGCATC 59.963 45.833 0.00 0.00 38.87 3.91
248 249 4.594970 TCGGGAAAGGAAAATTAGCATCA 58.405 39.130 0.00 0.00 0.00 3.07
249 250 4.398044 TCGGGAAAGGAAAATTAGCATCAC 59.602 41.667 0.00 0.00 0.00 3.06
250 251 4.440112 CGGGAAAGGAAAATTAGCATCACC 60.440 45.833 0.00 0.00 0.00 4.02
251 252 4.711846 GGGAAAGGAAAATTAGCATCACCT 59.288 41.667 0.00 0.00 0.00 4.00
252 253 5.187772 GGGAAAGGAAAATTAGCATCACCTT 59.812 40.000 0.00 0.00 37.79 3.50
253 254 6.295859 GGGAAAGGAAAATTAGCATCACCTTT 60.296 38.462 0.00 0.00 45.04 3.11
254 255 7.161404 GGAAAGGAAAATTAGCATCACCTTTT 58.839 34.615 0.00 0.00 43.30 2.27
255 256 7.661437 GGAAAGGAAAATTAGCATCACCTTTTT 59.339 33.333 0.00 0.00 43.30 1.94
281 282 8.568732 TTTTTGCTCTTACTTATTGGAAAACG 57.431 30.769 0.00 0.00 30.21 3.60
282 283 5.291293 TGCTCTTACTTATTGGAAAACGC 57.709 39.130 0.00 0.00 0.00 4.84
283 284 5.001232 TGCTCTTACTTATTGGAAAACGCT 58.999 37.500 0.00 0.00 0.00 5.07
284 285 5.472137 TGCTCTTACTTATTGGAAAACGCTT 59.528 36.000 0.00 0.00 0.00 4.68
285 286 6.016610 TGCTCTTACTTATTGGAAAACGCTTT 60.017 34.615 0.00 0.00 0.00 3.51
286 287 7.173562 TGCTCTTACTTATTGGAAAACGCTTTA 59.826 33.333 0.00 0.00 0.00 1.85
287 288 7.480855 GCTCTTACTTATTGGAAAACGCTTTAC 59.519 37.037 0.00 0.00 0.00 2.01
288 289 8.380743 TCTTACTTATTGGAAAACGCTTTACA 57.619 30.769 0.00 0.00 33.29 2.41
289 290 9.005777 TCTTACTTATTGGAAAACGCTTTACAT 57.994 29.630 0.00 0.00 35.24 2.29
290 291 9.274065 CTTACTTATTGGAAAACGCTTTACATC 57.726 33.333 0.00 0.00 35.24 3.06
291 292 7.209471 ACTTATTGGAAAACGCTTTACATCA 57.791 32.000 0.00 0.00 35.24 3.07
292 293 7.305474 ACTTATTGGAAAACGCTTTACATCAG 58.695 34.615 0.00 0.00 35.24 2.90
293 294 3.552604 TGGAAAACGCTTTACATCAGC 57.447 42.857 0.00 0.00 29.91 4.26
294 295 2.227865 TGGAAAACGCTTTACATCAGCC 59.772 45.455 0.00 0.00 29.91 4.85
295 296 2.505866 GAAAACGCTTTACATCAGCCG 58.494 47.619 0.00 0.00 33.29 5.52
296 297 0.802494 AAACGCTTTACATCAGCCGG 59.198 50.000 0.00 0.00 33.29 6.13
297 298 1.644786 AACGCTTTACATCAGCCGGC 61.645 55.000 21.89 21.89 33.29 6.13
298 299 2.106074 CGCTTTACATCAGCCGGCA 61.106 57.895 31.54 9.64 33.29 5.69
299 300 1.723870 GCTTTACATCAGCCGGCAG 59.276 57.895 31.54 22.82 0.00 4.85
300 301 0.744414 GCTTTACATCAGCCGGCAGA 60.744 55.000 31.54 28.05 0.00 4.26
301 302 1.959042 CTTTACATCAGCCGGCAGAT 58.041 50.000 31.54 29.09 0.00 2.90
302 303 2.292267 CTTTACATCAGCCGGCAGATT 58.708 47.619 29.69 21.88 0.00 2.40
303 304 2.418368 TTACATCAGCCGGCAGATTT 57.582 45.000 29.69 25.59 0.00 2.17
304 305 3.552132 TTACATCAGCCGGCAGATTTA 57.448 42.857 29.69 24.55 0.00 1.40
305 306 2.418368 ACATCAGCCGGCAGATTTAA 57.582 45.000 29.69 5.55 0.00 1.52
306 307 2.017049 ACATCAGCCGGCAGATTTAAC 58.983 47.619 29.69 0.00 0.00 2.01
307 308 2.016318 CATCAGCCGGCAGATTTAACA 58.984 47.619 29.69 3.96 0.00 2.41
308 309 1.448985 TCAGCCGGCAGATTTAACAC 58.551 50.000 31.54 0.00 0.00 3.32
309 310 0.096976 CAGCCGGCAGATTTAACACG 59.903 55.000 31.54 0.00 0.00 4.49
310 311 1.226295 GCCGGCAGATTTAACACGC 60.226 57.895 24.80 0.00 0.00 5.34
311 312 1.060308 CCGGCAGATTTAACACGCG 59.940 57.895 3.53 3.53 0.00 6.01
312 313 1.580132 CGGCAGATTTAACACGCGC 60.580 57.895 5.73 0.00 0.00 6.86
313 314 1.580132 GGCAGATTTAACACGCGCG 60.580 57.895 30.96 30.96 0.00 6.86
314 315 1.131826 GCAGATTTAACACGCGCGT 59.868 52.632 32.73 32.73 0.00 6.01
315 316 0.852007 GCAGATTTAACACGCGCGTC 60.852 55.000 35.61 20.20 0.00 5.19
316 317 0.580676 CAGATTTAACACGCGCGTCG 60.581 55.000 35.61 28.55 45.38 5.12
317 318 0.730155 AGATTTAACACGCGCGTCGA 60.730 50.000 35.61 18.48 41.67 4.20
318 319 0.579960 GATTTAACACGCGCGTCGAC 60.580 55.000 35.61 15.81 41.67 4.20
319 320 1.947934 ATTTAACACGCGCGTCGACC 61.948 55.000 35.61 1.77 41.67 4.79
330 331 3.808656 GTCGACCGTCTCCCCGAC 61.809 72.222 3.51 0.00 43.28 4.79
331 332 4.025858 TCGACCGTCTCCCCGACT 62.026 66.667 0.00 0.00 40.59 4.18
332 333 3.812019 CGACCGTCTCCCCGACTG 61.812 72.222 0.00 0.00 40.59 3.51
333 334 2.675772 GACCGTCTCCCCGACTGT 60.676 66.667 0.00 0.00 41.91 3.55
334 335 2.675772 ACCGTCTCCCCGACTGTC 60.676 66.667 0.00 0.00 35.50 3.51
335 336 3.450115 CCGTCTCCCCGACTGTCC 61.450 72.222 1.55 0.00 40.59 4.02
336 337 3.812019 CGTCTCCCCGACTGTCCG 61.812 72.222 1.55 0.00 40.59 4.79
337 338 2.360852 GTCTCCCCGACTGTCCGA 60.361 66.667 1.55 0.00 39.61 4.55
338 339 1.753463 GTCTCCCCGACTGTCCGAT 60.753 63.158 1.55 0.00 39.61 4.18
339 340 1.453379 TCTCCCCGACTGTCCGATC 60.453 63.158 1.55 0.00 0.00 3.69
340 341 1.753078 CTCCCCGACTGTCCGATCA 60.753 63.158 1.55 0.00 0.00 2.92
341 342 2.005960 CTCCCCGACTGTCCGATCAC 62.006 65.000 1.55 0.00 0.00 3.06
342 343 2.102357 CCCGACTGTCCGATCACG 59.898 66.667 1.55 0.00 39.43 4.35
343 344 2.579787 CCGACTGTCCGATCACGC 60.580 66.667 1.55 0.00 38.29 5.34
344 345 2.579787 CGACTGTCCGATCACGCC 60.580 66.667 1.55 0.00 38.29 5.68
345 346 2.202756 GACTGTCCGATCACGCCC 60.203 66.667 0.00 0.00 38.29 6.13
346 347 3.718210 GACTGTCCGATCACGCCCC 62.718 68.421 0.00 0.00 38.29 5.80
347 348 3.461773 CTGTCCGATCACGCCCCT 61.462 66.667 0.00 0.00 38.29 4.79
348 349 3.000819 TGTCCGATCACGCCCCTT 61.001 61.111 0.00 0.00 38.29 3.95
349 350 1.672854 CTGTCCGATCACGCCCCTTA 61.673 60.000 0.00 0.00 38.29 2.69
350 351 1.227176 GTCCGATCACGCCCCTTAC 60.227 63.158 0.00 0.00 38.29 2.34
351 352 1.380785 TCCGATCACGCCCCTTACT 60.381 57.895 0.00 0.00 38.29 2.24
352 353 0.974010 TCCGATCACGCCCCTTACTT 60.974 55.000 0.00 0.00 38.29 2.24
353 354 0.748450 CCGATCACGCCCCTTACTTA 59.252 55.000 0.00 0.00 38.29 2.24
354 355 1.343465 CCGATCACGCCCCTTACTTAT 59.657 52.381 0.00 0.00 38.29 1.73
355 356 2.224209 CCGATCACGCCCCTTACTTATT 60.224 50.000 0.00 0.00 38.29 1.40
356 357 2.800544 CGATCACGCCCCTTACTTATTG 59.199 50.000 0.00 0.00 0.00 1.90
357 358 2.702592 TCACGCCCCTTACTTATTGG 57.297 50.000 0.00 0.00 0.00 3.16
358 359 1.210967 TCACGCCCCTTACTTATTGGG 59.789 52.381 0.00 0.00 41.23 4.12
359 360 1.064979 CACGCCCCTTACTTATTGGGT 60.065 52.381 0.00 0.00 40.36 4.51
360 361 1.637035 ACGCCCCTTACTTATTGGGTT 59.363 47.619 0.00 0.00 40.36 4.11
361 362 2.042026 ACGCCCCTTACTTATTGGGTTT 59.958 45.455 0.00 0.00 40.36 3.27
362 363 3.266513 ACGCCCCTTACTTATTGGGTTTA 59.733 43.478 0.00 0.00 40.36 2.01
363 364 4.263860 ACGCCCCTTACTTATTGGGTTTAA 60.264 41.667 0.00 0.00 40.36 1.52
364 365 4.891168 CGCCCCTTACTTATTGGGTTTAAT 59.109 41.667 0.00 0.00 40.36 1.40
365 366 5.361571 CGCCCCTTACTTATTGGGTTTAATT 59.638 40.000 0.00 0.00 40.36 1.40
366 367 6.127281 CGCCCCTTACTTATTGGGTTTAATTT 60.127 38.462 0.00 0.00 40.36 1.82
367 368 7.270047 GCCCCTTACTTATTGGGTTTAATTTC 58.730 38.462 0.00 0.00 40.36 2.17
368 369 7.125204 GCCCCTTACTTATTGGGTTTAATTTCT 59.875 37.037 0.00 0.00 40.36 2.52
369 370 9.042450 CCCCTTACTTATTGGGTTTAATTTCTT 57.958 33.333 0.00 0.00 39.31 2.52
397 398 3.904136 AGCATCAGTACAAACACAAGC 57.096 42.857 0.00 0.00 0.00 4.01
398 399 2.224079 AGCATCAGTACAAACACAAGCG 59.776 45.455 0.00 0.00 0.00 4.68
399 400 2.574322 CATCAGTACAAACACAAGCGC 58.426 47.619 0.00 0.00 0.00 5.92
400 401 1.948104 TCAGTACAAACACAAGCGCT 58.052 45.000 2.64 2.64 0.00 5.92
401 402 1.864711 TCAGTACAAACACAAGCGCTC 59.135 47.619 12.06 0.00 0.00 5.03
402 403 1.597195 CAGTACAAACACAAGCGCTCA 59.403 47.619 12.06 0.00 0.00 4.26
403 404 2.224079 CAGTACAAACACAAGCGCTCAT 59.776 45.455 12.06 0.00 0.00 2.90
404 405 3.431912 CAGTACAAACACAAGCGCTCATA 59.568 43.478 12.06 0.00 0.00 2.15
405 406 4.093408 CAGTACAAACACAAGCGCTCATAT 59.907 41.667 12.06 0.00 0.00 1.78
406 407 5.290885 CAGTACAAACACAAGCGCTCATATA 59.709 40.000 12.06 0.00 0.00 0.86
407 408 6.018751 CAGTACAAACACAAGCGCTCATATAT 60.019 38.462 12.06 0.00 0.00 0.86
408 409 7.169140 CAGTACAAACACAAGCGCTCATATATA 59.831 37.037 12.06 0.00 0.00 0.86
409 410 6.287107 ACAAACACAAGCGCTCATATATAC 57.713 37.500 12.06 0.00 0.00 1.47
410 411 5.051039 ACAAACACAAGCGCTCATATATACG 60.051 40.000 12.06 0.00 0.00 3.06
418 419 3.359654 CGCTCATATATACGCGCATACA 58.640 45.455 5.73 0.00 39.11 2.29
419 420 3.177838 CGCTCATATATACGCGCATACAC 59.822 47.826 5.73 0.00 39.11 2.90
420 421 4.352039 GCTCATATATACGCGCATACACT 58.648 43.478 5.73 0.00 0.00 3.55
421 422 4.438145 GCTCATATATACGCGCATACACTC 59.562 45.833 5.73 0.00 0.00 3.51
422 423 5.554822 TCATATATACGCGCATACACTCA 57.445 39.130 5.73 0.00 0.00 3.41
423 424 5.329493 TCATATATACGCGCATACACTCAC 58.671 41.667 5.73 0.00 0.00 3.51
424 425 2.410785 TATACGCGCATACACTCACC 57.589 50.000 5.73 0.00 0.00 4.02
425 426 0.249322 ATACGCGCATACACTCACCC 60.249 55.000 5.73 0.00 0.00 4.61
426 427 2.287457 TACGCGCATACACTCACCCC 62.287 60.000 5.73 0.00 0.00 4.95
427 428 2.584608 GCGCATACACTCACCCCT 59.415 61.111 0.30 0.00 0.00 4.79
428 429 1.820581 GCGCATACACTCACCCCTA 59.179 57.895 0.30 0.00 0.00 3.53
429 430 0.393077 GCGCATACACTCACCCCTAT 59.607 55.000 0.30 0.00 0.00 2.57
430 431 1.873903 GCGCATACACTCACCCCTATG 60.874 57.143 0.30 0.00 0.00 2.23
431 432 1.686587 CGCATACACTCACCCCTATGA 59.313 52.381 0.00 0.00 0.00 2.15
432 433 2.102420 CGCATACACTCACCCCTATGAA 59.898 50.000 0.00 0.00 0.00 2.57
433 434 3.467803 GCATACACTCACCCCTATGAAC 58.532 50.000 0.00 0.00 0.00 3.18
434 435 3.717707 CATACACTCACCCCTATGAACG 58.282 50.000 0.00 0.00 0.00 3.95
435 436 0.249398 ACACTCACCCCTATGAACGC 59.751 55.000 0.00 0.00 0.00 4.84
436 437 0.249120 CACTCACCCCTATGAACGCA 59.751 55.000 0.00 0.00 0.00 5.24
437 438 0.249398 ACTCACCCCTATGAACGCAC 59.751 55.000 0.00 0.00 0.00 5.34
438 439 0.249120 CTCACCCCTATGAACGCACA 59.751 55.000 0.00 0.00 0.00 4.57
439 440 0.036765 TCACCCCTATGAACGCACAC 60.037 55.000 0.00 0.00 0.00 3.82
440 441 0.321210 CACCCCTATGAACGCACACA 60.321 55.000 0.00 0.00 0.00 3.72
441 442 0.321298 ACCCCTATGAACGCACACAC 60.321 55.000 0.00 0.00 0.00 3.82
442 443 1.358725 CCCCTATGAACGCACACACG 61.359 60.000 0.00 0.00 39.50 4.49
449 450 4.895854 ACGCACACACGTATACCC 57.104 55.556 0.00 0.00 46.19 3.69
450 451 2.269978 ACGCACACACGTATACCCT 58.730 52.632 0.00 0.00 46.19 4.34
451 452 1.462616 ACGCACACACGTATACCCTA 58.537 50.000 0.00 0.00 46.19 3.53
452 453 1.133025 ACGCACACACGTATACCCTAC 59.867 52.381 0.00 0.00 46.19 3.18
453 454 1.534595 CGCACACACGTATACCCTACC 60.535 57.143 0.00 0.00 0.00 3.18
454 455 1.202452 GCACACACGTATACCCTACCC 60.202 57.143 0.00 0.00 0.00 3.69
455 456 1.410153 CACACACGTATACCCTACCCC 59.590 57.143 0.00 0.00 0.00 4.95
456 457 1.288932 ACACACGTATACCCTACCCCT 59.711 52.381 0.00 0.00 0.00 4.79
457 458 2.513738 ACACACGTATACCCTACCCCTA 59.486 50.000 0.00 0.00 0.00 3.53
458 459 3.140895 ACACACGTATACCCTACCCCTAT 59.859 47.826 0.00 0.00 0.00 2.57
459 460 3.508793 CACACGTATACCCTACCCCTATG 59.491 52.174 0.00 0.00 0.00 2.23
460 461 3.398967 ACACGTATACCCTACCCCTATGA 59.601 47.826 0.00 0.00 0.00 2.15
461 462 4.015084 CACGTATACCCTACCCCTATGAG 58.985 52.174 0.00 0.00 0.00 2.90
462 463 3.022406 CGTATACCCTACCCCTATGAGC 58.978 54.545 0.00 0.00 0.00 4.26
463 464 3.562826 CGTATACCCTACCCCTATGAGCA 60.563 52.174 0.00 0.00 0.00 4.26
464 465 2.393630 TACCCTACCCCTATGAGCAC 57.606 55.000 0.00 0.00 0.00 4.40
465 466 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
466 467 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
467 468 1.343069 CCTACCCCTATGAGCACCTC 58.657 60.000 0.00 0.00 0.00 3.85
468 469 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
469 470 0.469331 TACCCCTATGAGCACCTCCG 60.469 60.000 0.00 0.00 0.00 4.63
470 471 1.457643 CCCCTATGAGCACCTCCGA 60.458 63.158 0.00 0.00 0.00 4.55
471 472 1.467678 CCCCTATGAGCACCTCCGAG 61.468 65.000 0.00 0.00 0.00 4.63
472 473 0.468214 CCCTATGAGCACCTCCGAGA 60.468 60.000 0.00 0.00 0.00 4.04
473 474 0.958091 CCTATGAGCACCTCCGAGAG 59.042 60.000 0.00 0.00 0.00 3.20
474 475 1.477740 CCTATGAGCACCTCCGAGAGA 60.478 57.143 0.00 0.00 0.00 3.10
475 476 1.606668 CTATGAGCACCTCCGAGAGAC 59.393 57.143 0.00 0.00 0.00 3.36
476 477 0.033601 ATGAGCACCTCCGAGAGACT 60.034 55.000 0.00 0.00 0.00 3.24
477 478 0.962855 TGAGCACCTCCGAGAGACTG 60.963 60.000 0.00 0.22 0.00 3.51
478 479 0.678366 GAGCACCTCCGAGAGACTGA 60.678 60.000 0.00 0.00 0.00 3.41
479 480 0.679640 AGCACCTCCGAGAGACTGAG 60.680 60.000 0.00 0.00 0.00 3.35
480 481 1.806568 CACCTCCGAGAGACTGAGC 59.193 63.158 0.00 0.00 0.00 4.26
481 482 1.379309 ACCTCCGAGAGACTGAGCC 60.379 63.158 0.00 0.00 0.00 4.70
482 483 2.477176 CCTCCGAGAGACTGAGCCG 61.477 68.421 0.00 0.00 0.00 5.52
483 484 2.438614 TCCGAGAGACTGAGCCGG 60.439 66.667 0.00 0.00 41.36 6.13
484 485 4.200283 CCGAGAGACTGAGCCGGC 62.200 72.222 21.89 21.89 33.47 6.13
485 486 3.443925 CGAGAGACTGAGCCGGCA 61.444 66.667 31.54 7.98 0.00 5.69
486 487 2.780094 CGAGAGACTGAGCCGGCAT 61.780 63.158 31.54 14.28 0.00 4.40
487 488 1.448119 CGAGAGACTGAGCCGGCATA 61.448 60.000 31.54 16.21 0.00 3.14
488 489 0.965439 GAGAGACTGAGCCGGCATAT 59.035 55.000 31.54 8.11 0.00 1.78
489 490 0.965439 AGAGACTGAGCCGGCATATC 59.035 55.000 31.54 18.63 0.00 1.63
490 491 0.676184 GAGACTGAGCCGGCATATCA 59.324 55.000 31.54 22.44 0.00 2.15
491 492 1.274728 GAGACTGAGCCGGCATATCAT 59.725 52.381 31.54 13.17 0.00 2.45
492 493 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
493 494 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
494 495 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
495 496 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
496 497 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
497 498 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
498 499 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
499 500 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
500 501 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
501 502 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
502 503 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
503 504 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
504 505 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
505 506 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
506 507 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
507 508 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
508 509 7.232994 GCATATCATCTTGAGATTTACGAAGC 58.767 38.462 0.00 0.00 31.21 3.86
509 510 7.623089 GCATATCATCTTGAGATTTACGAAGCC 60.623 40.741 0.00 0.00 31.21 4.35
510 511 5.084818 TCATCTTGAGATTTACGAAGCCA 57.915 39.130 0.00 0.00 31.21 4.75
511 512 4.870426 TCATCTTGAGATTTACGAAGCCAC 59.130 41.667 0.00 0.00 31.21 5.01
512 513 3.596214 TCTTGAGATTTACGAAGCCACC 58.404 45.455 0.00 0.00 0.00 4.61
513 514 3.007506 TCTTGAGATTTACGAAGCCACCA 59.992 43.478 0.00 0.00 0.00 4.17
514 515 3.627395 TGAGATTTACGAAGCCACCAT 57.373 42.857 0.00 0.00 0.00 3.55
515 516 4.746535 TGAGATTTACGAAGCCACCATA 57.253 40.909 0.00 0.00 0.00 2.74
516 517 4.693283 TGAGATTTACGAAGCCACCATAG 58.307 43.478 0.00 0.00 0.00 2.23
517 518 4.058817 GAGATTTACGAAGCCACCATAGG 58.941 47.826 0.00 0.00 0.00 2.57
525 526 3.849951 CCACCATAGGCGCCTCGT 61.850 66.667 36.73 24.45 0.00 4.18
526 527 2.279517 CACCATAGGCGCCTCGTC 60.280 66.667 36.73 1.08 0.00 4.20
527 528 3.900892 ACCATAGGCGCCTCGTCG 61.901 66.667 36.73 21.01 36.23 5.12
528 529 3.900892 CCATAGGCGCCTCGTCGT 61.901 66.667 36.73 11.27 36.23 4.34
529 530 2.353607 CATAGGCGCCTCGTCGTC 60.354 66.667 36.73 0.00 36.23 4.20
530 531 3.950254 ATAGGCGCCTCGTCGTCG 61.950 66.667 36.73 0.00 39.34 5.12
551 552 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
552 553 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
553 554 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
554 555 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
555 556 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
556 557 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
557 558 0.390472 CGTCTCCTCCCACTGAAAGC 60.390 60.000 0.00 0.00 37.60 3.51
558 559 0.390472 GTCTCCTCCCACTGAAAGCG 60.390 60.000 0.00 0.00 37.60 4.68
559 560 1.743252 CTCCTCCCACTGAAAGCGC 60.743 63.158 0.00 0.00 37.60 5.92
560 561 2.032528 CCTCCCACTGAAAGCGCA 59.967 61.111 11.47 0.00 37.60 6.09
561 562 1.377725 CCTCCCACTGAAAGCGCAT 60.378 57.895 11.47 0.00 37.60 4.73
562 563 1.372087 CCTCCCACTGAAAGCGCATC 61.372 60.000 11.47 8.39 37.60 3.91
563 564 1.699656 CTCCCACTGAAAGCGCATCG 61.700 60.000 11.47 6.82 37.60 3.84
574 575 3.409856 CGCATCGCCGGAAATTCT 58.590 55.556 5.05 0.00 0.00 2.40
575 576 1.010797 CGCATCGCCGGAAATTCTG 60.011 57.895 5.05 0.00 0.00 3.02
576 577 1.428370 CGCATCGCCGGAAATTCTGA 61.428 55.000 5.05 0.00 0.00 3.27
577 578 0.732571 GCATCGCCGGAAATTCTGAA 59.267 50.000 5.05 0.00 0.00 3.02
578 579 1.132262 GCATCGCCGGAAATTCTGAAA 59.868 47.619 5.05 0.00 0.00 2.69
579 580 2.223572 GCATCGCCGGAAATTCTGAAAT 60.224 45.455 5.05 0.00 0.00 2.17
580 581 3.003275 GCATCGCCGGAAATTCTGAAATA 59.997 43.478 5.05 0.00 0.00 1.40
581 582 4.497340 GCATCGCCGGAAATTCTGAAATAA 60.497 41.667 5.05 0.00 0.00 1.40
582 583 5.577835 CATCGCCGGAAATTCTGAAATAAA 58.422 37.500 5.05 0.00 0.00 1.40
583 584 5.828299 TCGCCGGAAATTCTGAAATAAAT 57.172 34.783 5.05 0.00 0.00 1.40
584 585 5.816919 TCGCCGGAAATTCTGAAATAAATC 58.183 37.500 5.05 0.00 0.00 2.17
585 586 5.588648 TCGCCGGAAATTCTGAAATAAATCT 59.411 36.000 5.05 0.00 0.00 2.40
586 587 6.764085 TCGCCGGAAATTCTGAAATAAATCTA 59.236 34.615 5.05 0.00 0.00 1.98
587 588 7.042051 TCGCCGGAAATTCTGAAATAAATCTAG 60.042 37.037 5.05 0.00 0.00 2.43
588 589 7.363431 GCCGGAAATTCTGAAATAAATCTAGG 58.637 38.462 5.05 0.00 0.00 3.02
589 590 7.228706 GCCGGAAATTCTGAAATAAATCTAGGA 59.771 37.037 5.05 0.00 0.00 2.94
590 591 9.120538 CCGGAAATTCTGAAATAAATCTAGGAA 57.879 33.333 2.89 0.00 0.00 3.36
598 599 9.996554 TCTGAAATAAATCTAGGAATAATGCGA 57.003 29.630 0.00 0.00 0.00 5.10
600 601 8.721478 TGAAATAAATCTAGGAATAATGCGAGC 58.279 33.333 0.00 0.00 0.00 5.03
601 602 8.621532 AAATAAATCTAGGAATAATGCGAGCA 57.378 30.769 0.00 0.00 0.00 4.26
602 603 5.931441 AAATCTAGGAATAATGCGAGCAC 57.069 39.130 0.00 0.00 0.00 4.40
603 604 3.386768 TCTAGGAATAATGCGAGCACC 57.613 47.619 0.00 0.00 0.00 5.01
604 605 2.698274 TCTAGGAATAATGCGAGCACCA 59.302 45.455 0.00 0.00 0.00 4.17
605 606 2.418368 AGGAATAATGCGAGCACCAA 57.582 45.000 0.00 0.00 0.00 3.67
606 607 2.292267 AGGAATAATGCGAGCACCAAG 58.708 47.619 0.00 0.00 0.00 3.61
607 608 2.092968 AGGAATAATGCGAGCACCAAGA 60.093 45.455 0.00 0.00 0.00 3.02
608 609 2.880890 GGAATAATGCGAGCACCAAGAT 59.119 45.455 0.00 0.00 0.00 2.40
609 610 3.316308 GGAATAATGCGAGCACCAAGATT 59.684 43.478 0.00 0.00 0.00 2.40
610 611 4.202050 GGAATAATGCGAGCACCAAGATTT 60.202 41.667 0.00 0.00 0.00 2.17
611 612 2.642139 AATGCGAGCACCAAGATTTG 57.358 45.000 0.00 0.00 0.00 2.32
622 623 1.549203 CAAGATTTGGACCCTGGTGG 58.451 55.000 0.00 0.00 41.37 4.61
632 633 4.179896 CCTGGTGGGTTGGGGATA 57.820 61.111 0.00 0.00 0.00 2.59
633 634 1.613061 CCTGGTGGGTTGGGGATAC 59.387 63.158 0.00 0.00 0.00 2.24
648 649 3.538634 GGATACCACTGTCCACCTAAC 57.461 52.381 0.00 0.00 34.57 2.34
649 650 2.169978 GGATACCACTGTCCACCTAACC 59.830 54.545 0.00 0.00 34.57 2.85
650 651 2.402182 TACCACTGTCCACCTAACCA 57.598 50.000 0.00 0.00 0.00 3.67
651 652 1.742308 ACCACTGTCCACCTAACCAT 58.258 50.000 0.00 0.00 0.00 3.55
652 653 1.628846 ACCACTGTCCACCTAACCATC 59.371 52.381 0.00 0.00 0.00 3.51
653 654 1.909302 CCACTGTCCACCTAACCATCT 59.091 52.381 0.00 0.00 0.00 2.90
654 655 2.093447 CCACTGTCCACCTAACCATCTC 60.093 54.545 0.00 0.00 0.00 2.75
655 656 2.567169 CACTGTCCACCTAACCATCTCA 59.433 50.000 0.00 0.00 0.00 3.27
656 657 3.007940 CACTGTCCACCTAACCATCTCAA 59.992 47.826 0.00 0.00 0.00 3.02
657 658 3.008049 ACTGTCCACCTAACCATCTCAAC 59.992 47.826 0.00 0.00 0.00 3.18
658 659 2.304761 TGTCCACCTAACCATCTCAACC 59.695 50.000 0.00 0.00 0.00 3.77
659 660 2.304761 GTCCACCTAACCATCTCAACCA 59.695 50.000 0.00 0.00 0.00 3.67
660 661 2.304761 TCCACCTAACCATCTCAACCAC 59.695 50.000 0.00 0.00 0.00 4.16
661 662 2.039746 CCACCTAACCATCTCAACCACA 59.960 50.000 0.00 0.00 0.00 4.17
662 663 3.338249 CACCTAACCATCTCAACCACAG 58.662 50.000 0.00 0.00 0.00 3.66
663 664 2.305927 ACCTAACCATCTCAACCACAGG 59.694 50.000 0.00 0.00 0.00 4.00
664 665 2.305927 CCTAACCATCTCAACCACAGGT 59.694 50.000 0.00 0.00 37.65 4.00
673 674 3.725754 AACCACAGGTTGATTCGCT 57.274 47.368 0.00 0.00 45.07 4.93
674 675 1.981256 AACCACAGGTTGATTCGCTT 58.019 45.000 0.00 0.00 45.07 4.68
675 676 2.851263 ACCACAGGTTGATTCGCTTA 57.149 45.000 0.00 0.00 27.29 3.09
676 677 3.350219 ACCACAGGTTGATTCGCTTAT 57.650 42.857 0.00 0.00 27.29 1.73
677 678 3.686016 ACCACAGGTTGATTCGCTTATT 58.314 40.909 0.00 0.00 27.29 1.40
678 679 3.440173 ACCACAGGTTGATTCGCTTATTG 59.560 43.478 0.00 0.00 27.29 1.90
679 680 3.181497 CCACAGGTTGATTCGCTTATTGG 60.181 47.826 0.00 0.00 0.00 3.16
680 681 3.016736 ACAGGTTGATTCGCTTATTGGG 58.983 45.455 0.00 0.00 0.00 4.12
681 682 3.016736 CAGGTTGATTCGCTTATTGGGT 58.983 45.455 0.00 0.00 0.00 4.51
682 683 3.443681 CAGGTTGATTCGCTTATTGGGTT 59.556 43.478 0.00 0.00 0.00 4.11
683 684 4.082245 CAGGTTGATTCGCTTATTGGGTTT 60.082 41.667 0.00 0.00 0.00 3.27
684 685 5.124776 CAGGTTGATTCGCTTATTGGGTTTA 59.875 40.000 0.00 0.00 0.00 2.01
685 686 5.712917 AGGTTGATTCGCTTATTGGGTTTAA 59.287 36.000 0.00 0.00 0.00 1.52
686 687 6.379988 AGGTTGATTCGCTTATTGGGTTTAAT 59.620 34.615 0.00 0.00 0.00 1.40
687 688 7.039270 GGTTGATTCGCTTATTGGGTTTAATT 58.961 34.615 0.00 0.00 0.00 1.40
688 689 7.547722 GGTTGATTCGCTTATTGGGTTTAATTT 59.452 33.333 0.00 0.00 0.00 1.82
689 690 8.592155 GTTGATTCGCTTATTGGGTTTAATTTC 58.408 33.333 0.00 0.00 0.00 2.17
690 691 7.831753 TGATTCGCTTATTGGGTTTAATTTCA 58.168 30.769 0.00 0.00 0.00 2.69
691 692 8.307483 TGATTCGCTTATTGGGTTTAATTTCAA 58.693 29.630 0.00 0.00 0.00 2.69
692 693 8.702163 ATTCGCTTATTGGGTTTAATTTCAAG 57.298 30.769 0.00 0.00 0.00 3.02
693 694 6.626302 TCGCTTATTGGGTTTAATTTCAAGG 58.374 36.000 0.00 0.00 0.00 3.61
694 695 6.434652 TCGCTTATTGGGTTTAATTTCAAGGA 59.565 34.615 0.00 0.00 0.00 3.36
695 696 6.751888 CGCTTATTGGGTTTAATTTCAAGGAG 59.248 38.462 0.00 0.00 0.00 3.69
696 697 7.362574 CGCTTATTGGGTTTAATTTCAAGGAGA 60.363 37.037 0.00 0.00 0.00 3.71
697 698 8.311109 GCTTATTGGGTTTAATTTCAAGGAGAA 58.689 33.333 0.00 0.00 0.00 2.87
698 699 9.860898 CTTATTGGGTTTAATTTCAAGGAGAAG 57.139 33.333 0.00 0.00 37.57 2.85
699 700 9.594936 TTATTGGGTTTAATTTCAAGGAGAAGA 57.405 29.630 0.00 0.00 37.57 2.87
700 701 7.906199 TTGGGTTTAATTTCAAGGAGAAGAA 57.094 32.000 0.00 0.00 37.57 2.52
701 702 7.906199 TGGGTTTAATTTCAAGGAGAAGAAA 57.094 32.000 0.00 0.00 37.57 2.52
702 703 8.312669 TGGGTTTAATTTCAAGGAGAAGAAAA 57.687 30.769 0.00 0.00 37.30 2.29
703 704 8.933653 TGGGTTTAATTTCAAGGAGAAGAAAAT 58.066 29.630 0.00 0.00 37.30 1.82
709 710 6.575162 TTTCAAGGAGAAGAAAATAGCACC 57.425 37.500 0.00 0.00 37.57 5.01
710 711 4.589908 TCAAGGAGAAGAAAATAGCACCC 58.410 43.478 0.00 0.00 0.00 4.61
711 712 3.268023 AGGAGAAGAAAATAGCACCCG 57.732 47.619 0.00 0.00 0.00 5.28
712 713 1.671328 GGAGAAGAAAATAGCACCCGC 59.329 52.381 0.00 0.00 38.99 6.13
713 714 2.356135 GAGAAGAAAATAGCACCCGCA 58.644 47.619 0.00 0.00 42.27 5.69
714 715 2.747446 GAGAAGAAAATAGCACCCGCAA 59.253 45.455 0.00 0.00 42.27 4.85
715 716 3.153919 AGAAGAAAATAGCACCCGCAAA 58.846 40.909 0.00 0.00 42.27 3.68
716 717 3.572255 AGAAGAAAATAGCACCCGCAAAA 59.428 39.130 0.00 0.00 42.27 2.44
717 718 4.038642 AGAAGAAAATAGCACCCGCAAAAA 59.961 37.500 0.00 0.00 42.27 1.94
778 779 3.564235 AAATTCGTTTACGCTTTCCCC 57.436 42.857 0.00 0.00 39.60 4.81
779 780 2.484742 ATTCGTTTACGCTTTCCCCT 57.515 45.000 0.00 0.00 39.60 4.79
780 781 1.515081 TTCGTTTACGCTTTCCCCTG 58.485 50.000 0.00 0.00 39.60 4.45
781 782 0.393820 TCGTTTACGCTTTCCCCTGT 59.606 50.000 0.00 0.00 39.60 4.00
782 783 0.515564 CGTTTACGCTTTCCCCTGTG 59.484 55.000 0.00 0.00 0.00 3.66
783 784 0.879090 GTTTACGCTTTCCCCTGTGG 59.121 55.000 0.00 0.00 0.00 4.17
784 785 0.475044 TTTACGCTTTCCCCTGTGGT 59.525 50.000 0.00 0.00 34.77 4.16
785 786 0.475044 TTACGCTTTCCCCTGTGGTT 59.525 50.000 0.00 0.00 34.77 3.67
786 787 0.035739 TACGCTTTCCCCTGTGGTTC 59.964 55.000 0.00 0.00 34.77 3.62
787 788 2.325082 CGCTTTCCCCTGTGGTTCG 61.325 63.158 0.00 0.00 34.77 3.95
788 789 2.626780 GCTTTCCCCTGTGGTTCGC 61.627 63.158 0.00 0.00 34.77 4.70
789 790 2.281208 TTTCCCCTGTGGTTCGCG 60.281 61.111 0.00 0.00 34.77 5.87
790 791 3.109592 TTTCCCCTGTGGTTCGCGT 62.110 57.895 5.77 0.00 34.77 6.01
791 792 2.999739 TTTCCCCTGTGGTTCGCGTC 63.000 60.000 5.77 0.09 34.77 5.19
792 793 4.308458 CCCCTGTGGTTCGCGTCA 62.308 66.667 5.77 0.14 0.00 4.35
793 794 2.047274 CCCTGTGGTTCGCGTCAT 60.047 61.111 5.77 0.00 0.00 3.06
794 795 2.100631 CCCTGTGGTTCGCGTCATC 61.101 63.158 5.77 0.00 0.00 2.92
795 796 1.079819 CCTGTGGTTCGCGTCATCT 60.080 57.895 5.77 0.00 0.00 2.90
796 797 1.354337 CCTGTGGTTCGCGTCATCTG 61.354 60.000 5.77 0.00 0.00 2.90
797 798 0.667487 CTGTGGTTCGCGTCATCTGT 60.667 55.000 5.77 0.00 0.00 3.41
798 799 0.249699 TGTGGTTCGCGTCATCTGTT 60.250 50.000 5.77 0.00 0.00 3.16
799 800 0.163788 GTGGTTCGCGTCATCTGTTG 59.836 55.000 5.77 0.00 0.00 3.33
800 801 1.132640 GGTTCGCGTCATCTGTTGC 59.867 57.895 5.77 0.00 0.00 4.17
803 804 2.853210 CGCGTCATCTGTTGCGTT 59.147 55.556 0.00 0.00 45.12 4.84
804 805 1.225475 CGCGTCATCTGTTGCGTTC 60.225 57.895 0.00 0.00 45.12 3.95
805 806 1.859398 GCGTCATCTGTTGCGTTCA 59.141 52.632 0.00 0.00 0.00 3.18
806 807 0.179240 GCGTCATCTGTTGCGTTCAG 60.179 55.000 0.00 0.00 0.00 3.02
816 817 2.665603 GCGTTCAGCCTTCCTCCT 59.334 61.111 0.00 0.00 40.81 3.69
817 818 1.743252 GCGTTCAGCCTTCCTCCTG 60.743 63.158 0.00 0.00 40.81 3.86
818 819 1.743252 CGTTCAGCCTTCCTCCTGC 60.743 63.158 0.00 0.00 0.00 4.85
819 820 1.377856 GTTCAGCCTTCCTCCTGCC 60.378 63.158 0.00 0.00 0.00 4.85
820 821 2.606587 TTCAGCCTTCCTCCTGCCC 61.607 63.158 0.00 0.00 0.00 5.36
821 822 4.120755 CAGCCTTCCTCCTGCCCC 62.121 72.222 0.00 0.00 0.00 5.80
822 823 4.361429 AGCCTTCCTCCTGCCCCT 62.361 66.667 0.00 0.00 0.00 4.79
823 824 3.803162 GCCTTCCTCCTGCCCCTC 61.803 72.222 0.00 0.00 0.00 4.30
824 825 3.093172 CCTTCCTCCTGCCCCTCC 61.093 72.222 0.00 0.00 0.00 4.30
825 826 3.093172 CTTCCTCCTGCCCCTCCC 61.093 72.222 0.00 0.00 0.00 4.30
826 827 4.760220 TTCCTCCTGCCCCTCCCC 62.760 72.222 0.00 0.00 0.00 4.81
830 831 4.995058 TCCTGCCCCTCCCCGTTT 62.995 66.667 0.00 0.00 0.00 3.60
831 832 4.426313 CCTGCCCCTCCCCGTTTC 62.426 72.222 0.00 0.00 0.00 2.78
832 833 4.426313 CTGCCCCTCCCCGTTTCC 62.426 72.222 0.00 0.00 0.00 3.13
836 837 4.043100 CCCTCCCCGTTTCCCCAC 62.043 72.222 0.00 0.00 0.00 4.61
861 862 3.721706 CCTTCCCCAGCGAGCCTT 61.722 66.667 0.00 0.00 0.00 4.35
878 884 1.981495 CCTTCTTCCACTCCACTTCCT 59.019 52.381 0.00 0.00 0.00 3.36
887 893 0.977395 CTCCACTTCCTCGGTTTCCT 59.023 55.000 0.00 0.00 0.00 3.36
967 973 1.209504 CCTGCGATTTCCAGGGTTCTA 59.790 52.381 0.00 0.00 44.87 2.10
968 974 2.555199 CTGCGATTTCCAGGGTTCTAG 58.445 52.381 0.00 0.00 0.00 2.43
969 975 1.906574 TGCGATTTCCAGGGTTCTAGT 59.093 47.619 0.00 0.00 0.00 2.57
970 976 2.304761 TGCGATTTCCAGGGTTCTAGTT 59.695 45.455 0.00 0.00 0.00 2.24
971 977 2.937149 GCGATTTCCAGGGTTCTAGTTC 59.063 50.000 0.00 0.00 0.00 3.01
972 978 3.369576 GCGATTTCCAGGGTTCTAGTTCT 60.370 47.826 0.00 0.00 0.00 3.01
1042 1048 3.803082 GCAAGCAAGCGCGATCCA 61.803 61.111 12.10 0.00 45.49 3.41
1132 1138 1.416401 TGCCCATCTTCCGAGGTAATC 59.584 52.381 0.00 0.00 0.00 1.75
1146 1152 1.633945 GGTAATCAACCCACCTCCTGT 59.366 52.381 0.00 0.00 43.16 4.00
1165 1171 4.812476 CACCTCGCCGAATCCGCA 62.812 66.667 0.00 0.00 0.00 5.69
1166 1172 3.849951 ACCTCGCCGAATCCGCAT 61.850 61.111 0.00 0.00 0.00 4.73
1373 1382 3.560251 AGTGAGCGTGCAGGGGTT 61.560 61.111 8.72 0.00 0.00 4.11
1383 1392 2.115266 CAGGGGTTGAAGGGCGTT 59.885 61.111 0.00 0.00 0.00 4.84
1497 1506 1.332889 TGCAGAGACTGATGGCCGAT 61.333 55.000 0.00 0.00 32.44 4.18
1540 1549 9.405587 TGTTTTCTGTTTAACTGAACTTCTTTG 57.594 29.630 15.21 0.00 36.10 2.77
1542 1551 7.931578 TTCTGTTTAACTGAACTTCTTTGGA 57.068 32.000 12.27 0.00 32.30 3.53
1550 1559 7.881775 AACTGAACTTCTTTGGACACTATTT 57.118 32.000 0.00 0.00 0.00 1.40
1569 1578 9.755804 CACTATTTTCTTATGATAGCTCTGTGA 57.244 33.333 0.00 0.00 0.00 3.58
1589 1598 1.542492 ATTGCTCTGCCCTGTTCTTG 58.458 50.000 0.00 0.00 0.00 3.02
1598 1607 4.279169 TCTGCCCTGTTCTTGAAGAAAATG 59.721 41.667 9.51 1.24 35.75 2.32
1608 1617 9.761504 TGTTCTTGAAGAAAATGCAATGAAATA 57.238 25.926 9.51 0.00 35.75 1.40
1705 1714 0.613012 AAGGTGGAGAAGGCAATGGC 60.613 55.000 0.00 0.00 40.13 4.40
1725 1734 2.507484 CCACTTTGCAAGTCTCCATGA 58.493 47.619 0.00 0.00 40.46 3.07
1743 1752 8.485392 TCTCCATGAACAGTATTTATGACATCA 58.515 33.333 0.00 0.00 0.00 3.07
1796 1805 2.686118 GCCTGATCCCAAATTGCTCTCT 60.686 50.000 0.00 0.00 0.00 3.10
1893 1902 7.327975 TGTAGTTGGAGTAAGTGGTGATAATG 58.672 38.462 0.00 0.00 0.00 1.90
1965 1974 2.938451 TGCTGATGGCTAACATTTCTCG 59.062 45.455 0.00 0.00 40.72 4.04
1980 1989 5.812642 ACATTTCTCGGTCATAAGCTAACTG 59.187 40.000 0.00 0.00 0.00 3.16
2104 2117 4.327982 TGTGACTGCTATAAGATGGCTC 57.672 45.455 0.00 0.00 37.67 4.70
2326 2359 1.272769 GACTAGGTTTGTCTCACCGCT 59.727 52.381 0.00 0.00 39.56 5.52
2335 2368 0.389426 GTCTCACCGCTTTCGCCTTA 60.389 55.000 0.00 0.00 0.00 2.69
2357 2531 7.201812 CCTTACCTATGCACAAAAATATCAGCA 60.202 37.037 0.00 0.00 36.34 4.41
2477 2651 9.788960 AACTTGCTCAAACTTAAGAAAACTTAG 57.211 29.630 10.09 0.55 0.00 2.18
2669 2843 6.925610 ATTATCTACATGTGTCGTTGCATT 57.074 33.333 9.11 0.00 0.00 3.56
2706 2880 1.734388 AACTGCTCCAACAAACCCGC 61.734 55.000 0.00 0.00 0.00 6.13
2829 3003 8.954950 AGGATGACTACTGAAATGATAGTTTG 57.045 34.615 0.00 0.00 29.25 2.93
2997 3177 1.105457 GGCAGCCATCATACTTGCAA 58.895 50.000 6.55 0.00 0.00 4.08
2999 3179 2.288030 GGCAGCCATCATACTTGCAATC 60.288 50.000 6.55 0.00 0.00 2.67
3037 3217 2.910319 TGTTAGGCTGTCCTGGTTGTAT 59.090 45.455 0.00 0.00 44.08 2.29
3117 3361 2.301870 TGTTAGGCTGTCCTGGTTGTAG 59.698 50.000 0.00 0.00 44.08 2.74
3453 3700 7.332430 ACTCATGGTGCATTAAACATTTCAATG 59.668 33.333 0.00 0.00 42.10 2.82
3480 3727 6.483307 GCCTTTTGCTTTCCTTAATTGAAAGT 59.517 34.615 20.22 0.00 46.62 2.66
3565 3813 3.937706 AGTGAATAGCAGAATGTGTGAGC 59.062 43.478 0.00 0.00 39.31 4.26
3617 3865 2.425312 ACAACACACTTCGGCAAATTCA 59.575 40.909 0.00 0.00 0.00 2.57
3646 3894 1.272769 ACTTCTCGCACCTTACTGGAC 59.727 52.381 0.00 0.00 39.71 4.02
3723 3983 6.147821 GCAAGTAGTTTAGCAGATGTCTGAAA 59.852 38.462 13.94 3.87 46.59 2.69
3724 3984 7.148340 GCAAGTAGTTTAGCAGATGTCTGAAAT 60.148 37.037 13.94 1.88 46.59 2.17
3739 3999 2.912967 CTGAAATCTCGCATGTGCAAAC 59.087 45.455 0.00 0.00 42.21 2.93
3750 4010 3.799574 GCATGTGCAAACATTCCTTGTGA 60.800 43.478 0.00 0.00 38.78 3.58
3762 4022 7.435068 ACATTCCTTGTGATACACAGTTAAC 57.565 36.000 0.00 0.00 45.39 2.01
3781 4041 6.980397 AGTTAACATTTTGTTTTCTCAGCCTG 59.020 34.615 8.61 0.00 41.45 4.85
3789 4049 4.245660 TGTTTTCTCAGCCTGAGTTATCG 58.754 43.478 20.67 0.00 44.58 2.92
3841 4101 5.296283 CCTCTTATCAGAAATGGCAGTTCAG 59.704 44.000 27.01 20.18 0.00 3.02
3858 4118 5.297776 CAGTTCAGGAAACAACAACTGATCT 59.702 40.000 4.44 0.00 41.98 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.802039 GGTGGATAAATAAATTCCCATACTGTA 57.198 33.333 0.00 0.00 0.00 2.74
1 2 8.511126 AGGTGGATAAATAAATTCCCATACTGT 58.489 33.333 0.00 0.00 0.00 3.55
2 3 8.940397 AGGTGGATAAATAAATTCCCATACTG 57.060 34.615 0.00 0.00 0.00 2.74
6 7 9.951866 AACTAAGGTGGATAAATAAATTCCCAT 57.048 29.630 0.00 0.00 0.00 4.00
7 8 9.777008 AAACTAAGGTGGATAAATAAATTCCCA 57.223 29.630 0.00 0.00 0.00 4.37
11 12 9.884636 GGCAAAACTAAGGTGGATAAATAAATT 57.115 29.630 0.00 0.00 0.00 1.82
12 13 9.041354 TGGCAAAACTAAGGTGGATAAATAAAT 57.959 29.630 0.00 0.00 0.00 1.40
13 14 8.423906 TGGCAAAACTAAGGTGGATAAATAAA 57.576 30.769 0.00 0.00 0.00 1.40
14 15 8.423906 TTGGCAAAACTAAGGTGGATAAATAA 57.576 30.769 0.00 0.00 0.00 1.40
15 16 8.423906 TTTGGCAAAACTAAGGTGGATAAATA 57.576 30.769 10.83 0.00 0.00 1.40
16 17 6.926630 TTGGCAAAACTAAGGTGGATAAAT 57.073 33.333 0.00 0.00 0.00 1.40
17 18 6.732896 TTTGGCAAAACTAAGGTGGATAAA 57.267 33.333 10.83 0.00 0.00 1.40
18 19 6.517605 GTTTTGGCAAAACTAAGGTGGATAA 58.482 36.000 36.26 7.71 45.55 1.75
19 20 6.091718 GTTTTGGCAAAACTAAGGTGGATA 57.908 37.500 36.26 8.12 45.55 2.59
20 21 4.956085 GTTTTGGCAAAACTAAGGTGGAT 58.044 39.130 36.26 0.00 45.55 3.41
21 22 4.394439 GTTTTGGCAAAACTAAGGTGGA 57.606 40.909 36.26 8.79 45.55 4.02
31 32 8.329203 ACTCAGTTTAATTTGTTTTGGCAAAA 57.671 26.923 20.81 20.81 41.03 2.44
32 33 7.913674 ACTCAGTTTAATTTGTTTTGGCAAA 57.086 28.000 8.93 8.93 41.77 3.68
33 34 7.821846 AGAACTCAGTTTAATTTGTTTTGGCAA 59.178 29.630 0.00 0.00 0.00 4.52
34 35 7.327214 AGAACTCAGTTTAATTTGTTTTGGCA 58.673 30.769 0.00 0.00 0.00 4.92
35 36 7.770801 AGAACTCAGTTTAATTTGTTTTGGC 57.229 32.000 0.00 0.00 0.00 4.52
61 62 6.127026 TGGTACCTGGCATTTTAGTTGTTTTT 60.127 34.615 14.36 0.00 0.00 1.94
62 63 5.364157 TGGTACCTGGCATTTTAGTTGTTTT 59.636 36.000 14.36 0.00 0.00 2.43
63 64 4.896482 TGGTACCTGGCATTTTAGTTGTTT 59.104 37.500 14.36 0.00 0.00 2.83
64 65 4.475345 TGGTACCTGGCATTTTAGTTGTT 58.525 39.130 14.36 0.00 0.00 2.83
65 66 4.107127 TGGTACCTGGCATTTTAGTTGT 57.893 40.909 14.36 0.00 0.00 3.32
66 67 5.461032 TTTGGTACCTGGCATTTTAGTTG 57.539 39.130 14.36 0.00 0.00 3.16
67 68 5.600898 ACTTTTGGTACCTGGCATTTTAGTT 59.399 36.000 14.36 0.00 0.00 2.24
68 69 5.144832 ACTTTTGGTACCTGGCATTTTAGT 58.855 37.500 14.36 1.26 0.00 2.24
69 70 5.722021 ACTTTTGGTACCTGGCATTTTAG 57.278 39.130 14.36 0.68 0.00 1.85
70 71 6.098409 TGAAACTTTTGGTACCTGGCATTTTA 59.902 34.615 14.36 3.09 0.00 1.52
71 72 5.104735 TGAAACTTTTGGTACCTGGCATTTT 60.105 36.000 14.36 5.65 0.00 1.82
72 73 4.407296 TGAAACTTTTGGTACCTGGCATTT 59.593 37.500 14.36 8.43 0.00 2.32
73 74 3.964031 TGAAACTTTTGGTACCTGGCATT 59.036 39.130 14.36 1.38 0.00 3.56
74 75 3.571590 TGAAACTTTTGGTACCTGGCAT 58.428 40.909 14.36 0.00 0.00 4.40
75 76 3.019799 TGAAACTTTTGGTACCTGGCA 57.980 42.857 14.36 0.00 0.00 4.92
76 77 3.306019 CCATGAAACTTTTGGTACCTGGC 60.306 47.826 14.36 0.00 0.00 4.85
77 78 4.148838 TCCATGAAACTTTTGGTACCTGG 58.851 43.478 14.36 8.26 0.00 4.45
78 79 5.782893 TTCCATGAAACTTTTGGTACCTG 57.217 39.130 14.36 3.50 0.00 4.00
79 80 5.245977 CCATTCCATGAAACTTTTGGTACCT 59.754 40.000 14.36 0.00 0.00 3.08
80 81 5.478407 CCATTCCATGAAACTTTTGGTACC 58.522 41.667 4.43 4.43 0.00 3.34
81 82 4.929211 GCCATTCCATGAAACTTTTGGTAC 59.071 41.667 0.00 0.00 0.00 3.34
82 83 4.590647 TGCCATTCCATGAAACTTTTGGTA 59.409 37.500 0.00 0.00 0.00 3.25
83 84 3.390639 TGCCATTCCATGAAACTTTTGGT 59.609 39.130 0.00 0.00 0.00 3.67
84 85 4.005487 TGCCATTCCATGAAACTTTTGG 57.995 40.909 0.00 0.00 0.00 3.28
85 86 5.058490 ACTTGCCATTCCATGAAACTTTTG 58.942 37.500 0.00 0.00 0.00 2.44
86 87 5.163322 TGACTTGCCATTCCATGAAACTTTT 60.163 36.000 0.00 0.00 0.00 2.27
87 88 4.344679 TGACTTGCCATTCCATGAAACTTT 59.655 37.500 0.00 0.00 0.00 2.66
88 89 3.896888 TGACTTGCCATTCCATGAAACTT 59.103 39.130 0.00 0.00 0.00 2.66
89 90 3.499338 TGACTTGCCATTCCATGAAACT 58.501 40.909 0.00 0.00 0.00 2.66
90 91 3.940209 TGACTTGCCATTCCATGAAAC 57.060 42.857 0.00 0.00 0.00 2.78
91 92 4.527427 TCATTGACTTGCCATTCCATGAAA 59.473 37.500 0.00 0.00 0.00 2.69
92 93 4.087907 TCATTGACTTGCCATTCCATGAA 58.912 39.130 0.00 0.00 0.00 2.57
93 94 3.699413 TCATTGACTTGCCATTCCATGA 58.301 40.909 0.00 0.00 0.00 3.07
94 95 4.081862 AGTTCATTGACTTGCCATTCCATG 60.082 41.667 0.00 0.00 0.00 3.66
95 96 4.091549 AGTTCATTGACTTGCCATTCCAT 58.908 39.130 0.00 0.00 0.00 3.41
96 97 3.499338 AGTTCATTGACTTGCCATTCCA 58.501 40.909 0.00 0.00 0.00 3.53
97 98 4.240096 CAAGTTCATTGACTTGCCATTCC 58.760 43.478 12.72 0.00 46.84 3.01
105 106 9.747898 TTTATGGGTATACAAGTTCATTGACTT 57.252 29.630 5.01 0.00 41.83 3.01
106 107 9.920946 ATTTATGGGTATACAAGTTCATTGACT 57.079 29.630 5.01 0.00 41.83 3.41
107 108 9.950680 CATTTATGGGTATACAAGTTCATTGAC 57.049 33.333 5.01 0.00 41.83 3.18
108 109 9.130661 CCATTTATGGGTATACAAGTTCATTGA 57.869 33.333 5.01 0.00 44.31 2.57
158 159 9.522804 GTGTACATTTAAGTTTTGGTCAAATGA 57.477 29.630 11.62 0.00 38.34 2.57
159 160 8.760569 GGTGTACATTTAAGTTTTGGTCAAATG 58.239 33.333 0.00 5.40 40.65 2.32
160 161 7.929245 GGGTGTACATTTAAGTTTTGGTCAAAT 59.071 33.333 0.00 0.00 0.00 2.32
161 162 7.124448 AGGGTGTACATTTAAGTTTTGGTCAAA 59.876 33.333 0.00 0.00 0.00 2.69
162 163 6.608002 AGGGTGTACATTTAAGTTTTGGTCAA 59.392 34.615 0.00 0.00 0.00 3.18
163 164 6.130569 AGGGTGTACATTTAAGTTTTGGTCA 58.869 36.000 0.00 0.00 0.00 4.02
164 165 6.294342 GGAGGGTGTACATTTAAGTTTTGGTC 60.294 42.308 0.00 0.00 0.00 4.02
165 166 5.537295 GGAGGGTGTACATTTAAGTTTTGGT 59.463 40.000 0.00 0.00 0.00 3.67
166 167 5.536916 TGGAGGGTGTACATTTAAGTTTTGG 59.463 40.000 0.00 0.00 0.00 3.28
167 168 6.642707 TGGAGGGTGTACATTTAAGTTTTG 57.357 37.500 0.00 0.00 0.00 2.44
168 169 6.436218 GGATGGAGGGTGTACATTTAAGTTTT 59.564 38.462 0.00 0.00 0.00 2.43
169 170 5.949952 GGATGGAGGGTGTACATTTAAGTTT 59.050 40.000 0.00 0.00 0.00 2.66
170 171 5.253096 AGGATGGAGGGTGTACATTTAAGTT 59.747 40.000 0.00 0.00 0.00 2.66
171 172 4.788617 AGGATGGAGGGTGTACATTTAAGT 59.211 41.667 0.00 0.00 0.00 2.24
172 173 5.373812 AGGATGGAGGGTGTACATTTAAG 57.626 43.478 0.00 0.00 0.00 1.85
173 174 6.894735 TTAGGATGGAGGGTGTACATTTAA 57.105 37.500 0.00 0.00 0.00 1.52
174 175 6.894735 TTTAGGATGGAGGGTGTACATTTA 57.105 37.500 0.00 0.00 0.00 1.40
175 176 5.789574 TTTAGGATGGAGGGTGTACATTT 57.210 39.130 0.00 0.00 0.00 2.32
176 177 5.789574 TTTTAGGATGGAGGGTGTACATT 57.210 39.130 0.00 0.00 0.00 2.71
177 178 5.994416 ATTTTAGGATGGAGGGTGTACAT 57.006 39.130 0.00 0.00 0.00 2.29
178 179 6.445786 ACTTATTTTAGGATGGAGGGTGTACA 59.554 38.462 0.00 0.00 0.00 2.90
179 180 6.766467 CACTTATTTTAGGATGGAGGGTGTAC 59.234 42.308 0.00 0.00 0.00 2.90
180 181 6.674861 TCACTTATTTTAGGATGGAGGGTGTA 59.325 38.462 0.00 0.00 0.00 2.90
181 182 5.491078 TCACTTATTTTAGGATGGAGGGTGT 59.509 40.000 0.00 0.00 0.00 4.16
182 183 5.823045 GTCACTTATTTTAGGATGGAGGGTG 59.177 44.000 0.00 0.00 0.00 4.61
183 184 5.396436 CGTCACTTATTTTAGGATGGAGGGT 60.396 44.000 0.00 0.00 0.00 4.34
184 185 5.057149 CGTCACTTATTTTAGGATGGAGGG 58.943 45.833 0.00 0.00 0.00 4.30
185 186 5.523916 CACGTCACTTATTTTAGGATGGAGG 59.476 44.000 0.00 0.00 0.00 4.30
186 187 6.106673 ACACGTCACTTATTTTAGGATGGAG 58.893 40.000 0.00 0.00 0.00 3.86
187 188 6.045072 ACACGTCACTTATTTTAGGATGGA 57.955 37.500 0.00 0.00 0.00 3.41
188 189 6.814644 TGTACACGTCACTTATTTTAGGATGG 59.185 38.462 0.00 0.00 0.00 3.51
189 190 7.821595 TGTACACGTCACTTATTTTAGGATG 57.178 36.000 0.00 0.00 0.00 3.51
190 191 8.475639 AGATGTACACGTCACTTATTTTAGGAT 58.524 33.333 0.00 0.00 34.41 3.24
191 192 7.833786 AGATGTACACGTCACTTATTTTAGGA 58.166 34.615 0.00 0.00 34.41 2.94
192 193 8.475331 AAGATGTACACGTCACTTATTTTAGG 57.525 34.615 0.00 0.00 34.41 2.69
196 197 9.245962 GCTATAAGATGTACACGTCACTTATTT 57.754 33.333 17.55 6.65 34.14 1.40
197 198 8.630917 AGCTATAAGATGTACACGTCACTTATT 58.369 33.333 17.55 6.76 34.14 1.40
198 199 8.167605 AGCTATAAGATGTACACGTCACTTAT 57.832 34.615 0.00 10.88 35.61 1.73
199 200 7.255035 GGAGCTATAAGATGTACACGTCACTTA 60.255 40.741 0.00 4.50 34.41 2.24
200 201 6.452494 AGCTATAAGATGTACACGTCACTT 57.548 37.500 0.00 2.38 34.41 3.16
201 202 5.008811 GGAGCTATAAGATGTACACGTCACT 59.991 44.000 0.00 0.00 34.41 3.41
202 203 5.008811 AGGAGCTATAAGATGTACACGTCAC 59.991 44.000 0.00 0.00 34.41 3.67
203 204 5.131067 AGGAGCTATAAGATGTACACGTCA 58.869 41.667 0.00 0.00 34.41 4.35
204 205 5.615106 CGAGGAGCTATAAGATGTACACGTC 60.615 48.000 0.00 0.00 0.00 4.34
205 206 4.213694 CGAGGAGCTATAAGATGTACACGT 59.786 45.833 0.00 0.00 0.00 4.49
206 207 4.378563 CCGAGGAGCTATAAGATGTACACG 60.379 50.000 0.00 0.00 0.00 4.49
207 208 4.082679 CCCGAGGAGCTATAAGATGTACAC 60.083 50.000 0.00 0.00 0.00 2.90
208 209 4.079970 CCCGAGGAGCTATAAGATGTACA 58.920 47.826 0.00 0.00 0.00 2.90
209 210 4.333690 TCCCGAGGAGCTATAAGATGTAC 58.666 47.826 0.00 0.00 0.00 2.90
210 211 4.652679 TCCCGAGGAGCTATAAGATGTA 57.347 45.455 0.00 0.00 0.00 2.29
211 212 3.527507 TCCCGAGGAGCTATAAGATGT 57.472 47.619 0.00 0.00 0.00 3.06
212 213 4.322349 CCTTTCCCGAGGAGCTATAAGATG 60.322 50.000 0.00 0.00 39.25 2.90
213 214 3.835395 CCTTTCCCGAGGAGCTATAAGAT 59.165 47.826 0.00 0.00 39.25 2.40
214 215 3.117246 TCCTTTCCCGAGGAGCTATAAGA 60.117 47.826 0.00 0.00 40.87 2.10
215 216 3.231818 TCCTTTCCCGAGGAGCTATAAG 58.768 50.000 0.00 0.00 40.87 1.73
216 217 3.323774 TCCTTTCCCGAGGAGCTATAA 57.676 47.619 0.00 0.00 40.87 0.98
217 218 3.323774 TTCCTTTCCCGAGGAGCTATA 57.676 47.619 0.00 0.00 46.09 1.31
218 219 2.176247 TTCCTTTCCCGAGGAGCTAT 57.824 50.000 0.00 0.00 46.09 2.97
219 220 1.946984 TTTCCTTTCCCGAGGAGCTA 58.053 50.000 0.00 0.00 46.09 3.32
220 221 1.064825 TTTTCCTTTCCCGAGGAGCT 58.935 50.000 0.00 0.00 46.09 4.09
221 222 2.130272 ATTTTCCTTTCCCGAGGAGC 57.870 50.000 0.00 0.00 46.09 4.70
222 223 3.628032 GCTAATTTTCCTTTCCCGAGGAG 59.372 47.826 0.00 0.00 46.09 3.69
223 224 3.009695 TGCTAATTTTCCTTTCCCGAGGA 59.990 43.478 0.00 0.00 43.99 3.71
224 225 3.352648 TGCTAATTTTCCTTTCCCGAGG 58.647 45.455 0.00 0.00 38.20 4.63
225 226 4.640201 TGATGCTAATTTTCCTTTCCCGAG 59.360 41.667 0.00 0.00 0.00 4.63
226 227 4.398044 GTGATGCTAATTTTCCTTTCCCGA 59.602 41.667 0.00 0.00 0.00 5.14
227 228 4.440112 GGTGATGCTAATTTTCCTTTCCCG 60.440 45.833 0.00 0.00 0.00 5.14
228 229 4.711846 AGGTGATGCTAATTTTCCTTTCCC 59.288 41.667 0.00 0.00 0.00 3.97
229 230 5.921962 AGGTGATGCTAATTTTCCTTTCC 57.078 39.130 0.00 0.00 0.00 3.13
230 231 8.607441 AAAAAGGTGATGCTAATTTTCCTTTC 57.393 30.769 0.00 0.00 41.11 2.62
256 257 7.168469 GCGTTTTCCAATAAGTAAGAGCAAAAA 59.832 33.333 0.00 0.00 0.00 1.94
257 258 6.639279 GCGTTTTCCAATAAGTAAGAGCAAAA 59.361 34.615 0.00 0.00 0.00 2.44
258 259 6.016610 AGCGTTTTCCAATAAGTAAGAGCAAA 60.017 34.615 0.00 0.00 0.00 3.68
259 260 5.472137 AGCGTTTTCCAATAAGTAAGAGCAA 59.528 36.000 0.00 0.00 0.00 3.91
260 261 5.001232 AGCGTTTTCCAATAAGTAAGAGCA 58.999 37.500 0.00 0.00 0.00 4.26
261 262 5.547181 AGCGTTTTCCAATAAGTAAGAGC 57.453 39.130 0.00 0.00 0.00 4.09
262 263 8.500773 TGTAAAGCGTTTTCCAATAAGTAAGAG 58.499 33.333 0.00 0.00 0.00 2.85
263 264 8.380743 TGTAAAGCGTTTTCCAATAAGTAAGA 57.619 30.769 0.00 0.00 0.00 2.10
264 265 9.274065 GATGTAAAGCGTTTTCCAATAAGTAAG 57.726 33.333 0.00 0.00 0.00 2.34
265 266 8.784994 TGATGTAAAGCGTTTTCCAATAAGTAA 58.215 29.630 0.00 0.00 0.00 2.24
266 267 8.325421 TGATGTAAAGCGTTTTCCAATAAGTA 57.675 30.769 0.00 0.00 0.00 2.24
267 268 7.209471 TGATGTAAAGCGTTTTCCAATAAGT 57.791 32.000 0.00 0.00 0.00 2.24
268 269 6.251376 GCTGATGTAAAGCGTTTTCCAATAAG 59.749 38.462 0.00 0.00 0.00 1.73
269 270 6.090129 GCTGATGTAAAGCGTTTTCCAATAA 58.910 36.000 0.00 0.00 0.00 1.40
270 271 5.392595 GGCTGATGTAAAGCGTTTTCCAATA 60.393 40.000 0.00 0.00 41.78 1.90
271 272 4.485163 GCTGATGTAAAGCGTTTTCCAAT 58.515 39.130 0.00 0.00 0.00 3.16
272 273 3.305064 GGCTGATGTAAAGCGTTTTCCAA 60.305 43.478 0.00 0.00 41.78 3.53
273 274 2.227865 GGCTGATGTAAAGCGTTTTCCA 59.772 45.455 0.00 0.00 41.78 3.53
274 275 2.727916 CGGCTGATGTAAAGCGTTTTCC 60.728 50.000 0.00 0.00 41.78 3.13
275 276 2.505866 CGGCTGATGTAAAGCGTTTTC 58.494 47.619 0.00 0.00 41.78 2.29
276 277 1.199097 CCGGCTGATGTAAAGCGTTTT 59.801 47.619 2.00 2.00 41.78 2.43
277 278 0.802494 CCGGCTGATGTAAAGCGTTT 59.198 50.000 0.00 0.00 41.78 3.60
278 279 1.644786 GCCGGCTGATGTAAAGCGTT 61.645 55.000 22.15 0.00 41.78 4.84
279 280 2.106683 GCCGGCTGATGTAAAGCGT 61.107 57.895 22.15 0.00 41.78 5.07
280 281 2.040213 CTGCCGGCTGATGTAAAGCG 62.040 60.000 29.70 0.00 41.78 4.68
281 282 0.744414 TCTGCCGGCTGATGTAAAGC 60.744 55.000 29.82 0.00 40.06 3.51
282 283 1.959042 ATCTGCCGGCTGATGTAAAG 58.041 50.000 38.47 21.58 34.16 1.85
283 284 2.418368 AATCTGCCGGCTGATGTAAA 57.582 45.000 39.21 19.08 35.34 2.01
284 285 2.418368 AAATCTGCCGGCTGATGTAA 57.582 45.000 39.21 19.76 35.34 2.41
285 286 3.202906 GTTAAATCTGCCGGCTGATGTA 58.797 45.455 39.21 35.29 35.34 2.29
286 287 2.017049 GTTAAATCTGCCGGCTGATGT 58.983 47.619 39.21 36.24 35.34 3.06
287 288 2.016318 TGTTAAATCTGCCGGCTGATG 58.984 47.619 39.21 22.23 35.34 3.07
288 289 2.017049 GTGTTAAATCTGCCGGCTGAT 58.983 47.619 35.28 35.28 36.41 2.90
289 290 1.448985 GTGTTAAATCTGCCGGCTGA 58.551 50.000 34.20 34.20 0.00 4.26
290 291 0.096976 CGTGTTAAATCTGCCGGCTG 59.903 55.000 29.70 27.77 0.00 4.85
291 292 1.644786 GCGTGTTAAATCTGCCGGCT 61.645 55.000 29.70 9.54 0.00 5.52
292 293 1.226295 GCGTGTTAAATCTGCCGGC 60.226 57.895 22.73 22.73 0.00 6.13
293 294 1.060308 CGCGTGTTAAATCTGCCGG 59.940 57.895 0.00 0.00 0.00 6.13
294 295 1.580132 GCGCGTGTTAAATCTGCCG 60.580 57.895 8.43 0.00 0.00 5.69
295 296 1.580132 CGCGCGTGTTAAATCTGCC 60.580 57.895 24.19 0.00 0.00 4.85
296 297 0.852007 GACGCGCGTGTTAAATCTGC 60.852 55.000 42.90 18.09 0.00 4.26
297 298 0.580676 CGACGCGCGTGTTAAATCTG 60.581 55.000 42.90 15.45 34.64 2.90
298 299 0.730155 TCGACGCGCGTGTTAAATCT 60.730 50.000 42.90 12.81 41.80 2.40
299 300 0.579960 GTCGACGCGCGTGTTAAATC 60.580 55.000 42.90 22.72 41.80 2.17
300 301 1.413368 GTCGACGCGCGTGTTAAAT 59.587 52.632 42.90 14.68 41.80 1.40
301 302 2.647381 GGTCGACGCGCGTGTTAAA 61.647 57.895 42.90 17.46 41.80 1.52
302 303 3.098958 GGTCGACGCGCGTGTTAA 61.099 61.111 42.90 19.42 41.80 2.01
313 314 3.808656 GTCGGGGAGACGGTCGAC 61.809 72.222 7.13 7.13 43.62 4.20
321 322 1.453379 GATCGGACAGTCGGGGAGA 60.453 63.158 8.19 0.00 0.00 3.71
322 323 1.753078 TGATCGGACAGTCGGGGAG 60.753 63.158 8.19 0.00 0.00 4.30
323 324 2.050350 GTGATCGGACAGTCGGGGA 61.050 63.158 8.19 0.00 0.00 4.81
324 325 2.494918 GTGATCGGACAGTCGGGG 59.505 66.667 8.19 0.00 0.00 5.73
325 326 2.102357 CGTGATCGGACAGTCGGG 59.898 66.667 8.19 0.00 0.00 5.14
326 327 2.579787 GCGTGATCGGACAGTCGG 60.580 66.667 1.59 1.59 37.56 4.79
327 328 2.579787 GGCGTGATCGGACAGTCG 60.580 66.667 0.00 0.00 37.56 4.18
328 329 2.202756 GGGCGTGATCGGACAGTC 60.203 66.667 0.00 0.00 37.56 3.51
329 330 3.771160 GGGGCGTGATCGGACAGT 61.771 66.667 0.00 0.00 37.56 3.55
330 331 1.672854 TAAGGGGCGTGATCGGACAG 61.673 60.000 0.00 0.00 37.56 3.51
331 332 1.683025 TAAGGGGCGTGATCGGACA 60.683 57.895 0.00 0.00 37.56 4.02
332 333 1.227176 GTAAGGGGCGTGATCGGAC 60.227 63.158 0.00 0.00 37.56 4.79
333 334 0.974010 AAGTAAGGGGCGTGATCGGA 60.974 55.000 0.00 0.00 37.56 4.55
334 335 0.748450 TAAGTAAGGGGCGTGATCGG 59.252 55.000 0.00 0.00 37.56 4.18
335 336 2.800544 CAATAAGTAAGGGGCGTGATCG 59.199 50.000 0.00 0.00 40.37 3.69
336 337 3.139077 CCAATAAGTAAGGGGCGTGATC 58.861 50.000 0.00 0.00 0.00 2.92
337 338 2.158667 CCCAATAAGTAAGGGGCGTGAT 60.159 50.000 0.00 0.00 38.98 3.06
338 339 1.210967 CCCAATAAGTAAGGGGCGTGA 59.789 52.381 0.00 0.00 38.98 4.35
339 340 1.675552 CCCAATAAGTAAGGGGCGTG 58.324 55.000 0.00 0.00 38.98 5.34
372 373 6.695278 GCTTGTGTTTGTACTGATGCTAAAAA 59.305 34.615 0.00 0.00 0.00 1.94
373 374 6.205784 GCTTGTGTTTGTACTGATGCTAAAA 58.794 36.000 0.00 0.00 0.00 1.52
374 375 5.559991 CGCTTGTGTTTGTACTGATGCTAAA 60.560 40.000 0.00 0.00 0.00 1.85
375 376 4.084066 CGCTTGTGTTTGTACTGATGCTAA 60.084 41.667 0.00 0.00 0.00 3.09
376 377 3.431912 CGCTTGTGTTTGTACTGATGCTA 59.568 43.478 0.00 0.00 0.00 3.49
377 378 2.224079 CGCTTGTGTTTGTACTGATGCT 59.776 45.455 0.00 0.00 0.00 3.79
378 379 2.574322 CGCTTGTGTTTGTACTGATGC 58.426 47.619 0.00 0.00 0.00 3.91
379 380 2.224079 AGCGCTTGTGTTTGTACTGATG 59.776 45.455 2.64 0.00 0.00 3.07
380 381 2.480419 GAGCGCTTGTGTTTGTACTGAT 59.520 45.455 13.26 0.00 0.00 2.90
381 382 1.864711 GAGCGCTTGTGTTTGTACTGA 59.135 47.619 13.26 0.00 0.00 3.41
382 383 1.597195 TGAGCGCTTGTGTTTGTACTG 59.403 47.619 13.26 0.00 0.00 2.74
383 384 1.948104 TGAGCGCTTGTGTTTGTACT 58.052 45.000 13.26 0.00 0.00 2.73
384 385 2.969443 ATGAGCGCTTGTGTTTGTAC 57.031 45.000 13.26 0.00 0.00 2.90
385 386 6.143278 CGTATATATGAGCGCTTGTGTTTGTA 59.857 38.462 13.26 0.00 0.00 2.41
386 387 5.051039 CGTATATATGAGCGCTTGTGTTTGT 60.051 40.000 13.26 0.00 0.00 2.83
387 388 5.365942 CGTATATATGAGCGCTTGTGTTTG 58.634 41.667 13.26 0.00 0.00 2.93
388 389 4.084537 GCGTATATATGAGCGCTTGTGTTT 60.085 41.667 13.26 0.00 45.48 2.83
389 390 3.428870 GCGTATATATGAGCGCTTGTGTT 59.571 43.478 13.26 0.00 45.48 3.32
390 391 2.987149 GCGTATATATGAGCGCTTGTGT 59.013 45.455 13.26 4.27 45.48 3.72
391 392 2.026860 CGCGTATATATGAGCGCTTGTG 59.973 50.000 13.26 6.56 46.56 3.33
392 393 2.251040 CGCGTATATATGAGCGCTTGT 58.749 47.619 13.26 5.98 46.56 3.16
393 394 2.959586 CGCGTATATATGAGCGCTTG 57.040 50.000 13.26 7.35 46.56 4.01
398 399 4.352039 AGTGTATGCGCGTATATATGAGC 58.648 43.478 19.79 20.14 38.31 4.26
399 400 5.452623 GTGAGTGTATGCGCGTATATATGAG 59.547 44.000 19.79 3.76 0.00 2.90
400 401 5.329493 GTGAGTGTATGCGCGTATATATGA 58.671 41.667 19.79 3.29 0.00 2.15
401 402 4.499399 GGTGAGTGTATGCGCGTATATATG 59.501 45.833 19.79 0.00 0.00 1.78
402 403 4.439700 GGGTGAGTGTATGCGCGTATATAT 60.440 45.833 19.79 9.03 0.00 0.86
403 404 3.119743 GGGTGAGTGTATGCGCGTATATA 60.120 47.826 19.79 14.59 0.00 0.86
404 405 2.352421 GGGTGAGTGTATGCGCGTATAT 60.352 50.000 19.79 4.31 0.00 0.86
405 406 1.001048 GGGTGAGTGTATGCGCGTATA 60.001 52.381 13.13 13.13 0.00 1.47
406 407 0.249322 GGGTGAGTGTATGCGCGTAT 60.249 55.000 15.52 15.52 0.00 3.06
407 408 1.140161 GGGTGAGTGTATGCGCGTA 59.860 57.895 8.43 4.92 0.00 4.42
408 409 2.125673 GGGTGAGTGTATGCGCGT 60.126 61.111 8.43 7.55 0.00 6.01
409 410 2.011741 TAGGGGTGAGTGTATGCGCG 62.012 60.000 0.00 0.00 0.00 6.86
410 411 0.393077 ATAGGGGTGAGTGTATGCGC 59.607 55.000 0.00 0.00 0.00 6.09
411 412 1.686587 TCATAGGGGTGAGTGTATGCG 59.313 52.381 0.00 0.00 0.00 4.73
412 413 3.467803 GTTCATAGGGGTGAGTGTATGC 58.532 50.000 0.00 0.00 0.00 3.14
413 414 3.717707 CGTTCATAGGGGTGAGTGTATG 58.282 50.000 0.00 0.00 0.00 2.39
414 415 2.102588 GCGTTCATAGGGGTGAGTGTAT 59.897 50.000 0.00 0.00 0.00 2.29
415 416 1.479323 GCGTTCATAGGGGTGAGTGTA 59.521 52.381 0.00 0.00 0.00 2.90
416 417 0.249398 GCGTTCATAGGGGTGAGTGT 59.751 55.000 0.00 0.00 0.00 3.55
417 418 0.249120 TGCGTTCATAGGGGTGAGTG 59.751 55.000 0.00 0.00 0.00 3.51
418 419 0.249398 GTGCGTTCATAGGGGTGAGT 59.751 55.000 0.00 0.00 0.00 3.41
419 420 0.249120 TGTGCGTTCATAGGGGTGAG 59.751 55.000 0.00 0.00 0.00 3.51
420 421 0.036765 GTGTGCGTTCATAGGGGTGA 60.037 55.000 0.00 0.00 0.00 4.02
421 422 0.321210 TGTGTGCGTTCATAGGGGTG 60.321 55.000 0.00 0.00 0.00 4.61
422 423 0.321298 GTGTGTGCGTTCATAGGGGT 60.321 55.000 0.00 0.00 0.00 4.95
423 424 1.358725 CGTGTGTGCGTTCATAGGGG 61.359 60.000 0.00 0.00 0.00 4.79
424 425 0.669318 ACGTGTGTGCGTTCATAGGG 60.669 55.000 0.00 0.00 43.04 3.53
425 426 1.985334 TACGTGTGTGCGTTCATAGG 58.015 50.000 0.00 0.00 43.04 2.57
426 427 3.484649 GGTATACGTGTGTGCGTTCATAG 59.515 47.826 0.00 0.00 43.04 2.23
427 428 3.437428 GGTATACGTGTGTGCGTTCATA 58.563 45.455 0.00 0.00 43.04 2.15
428 429 2.264813 GGTATACGTGTGTGCGTTCAT 58.735 47.619 0.00 0.00 43.04 2.57
429 430 1.669502 GGGTATACGTGTGTGCGTTCA 60.670 52.381 0.00 0.00 43.04 3.18
430 431 0.994263 GGGTATACGTGTGTGCGTTC 59.006 55.000 0.00 0.00 43.04 3.95
431 432 0.604578 AGGGTATACGTGTGTGCGTT 59.395 50.000 0.00 0.00 43.04 4.84
433 434 1.534595 GGTAGGGTATACGTGTGTGCG 60.535 57.143 0.00 0.00 37.94 5.34
434 435 1.202452 GGGTAGGGTATACGTGTGTGC 60.202 57.143 0.00 0.00 0.00 4.57
435 436 1.410153 GGGGTAGGGTATACGTGTGTG 59.590 57.143 0.00 0.00 0.00 3.82
436 437 1.288932 AGGGGTAGGGTATACGTGTGT 59.711 52.381 0.00 0.00 0.00 3.72
437 438 2.077687 AGGGGTAGGGTATACGTGTG 57.922 55.000 0.00 0.00 0.00 3.82
438 439 3.398967 TCATAGGGGTAGGGTATACGTGT 59.601 47.826 0.00 0.00 0.00 4.49
439 440 4.015084 CTCATAGGGGTAGGGTATACGTG 58.985 52.174 0.00 0.00 0.00 4.49
440 441 3.563043 GCTCATAGGGGTAGGGTATACGT 60.563 52.174 0.00 0.00 0.00 3.57
441 442 3.022406 GCTCATAGGGGTAGGGTATACG 58.978 54.545 0.00 0.00 0.00 3.06
442 443 3.768215 GTGCTCATAGGGGTAGGGTATAC 59.232 52.174 0.00 0.00 0.00 1.47
443 444 3.245875 GGTGCTCATAGGGGTAGGGTATA 60.246 52.174 0.00 0.00 0.00 1.47
444 445 2.494816 GGTGCTCATAGGGGTAGGGTAT 60.495 54.545 0.00 0.00 0.00 2.73
445 446 1.132945 GGTGCTCATAGGGGTAGGGTA 60.133 57.143 0.00 0.00 0.00 3.69
446 447 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
447 448 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
448 449 1.343069 GAGGTGCTCATAGGGGTAGG 58.657 60.000 0.00 0.00 0.00 3.18
449 450 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
450 451 0.469331 CGGAGGTGCTCATAGGGGTA 60.469 60.000 0.00 0.00 31.08 3.69
451 452 1.762460 CGGAGGTGCTCATAGGGGT 60.762 63.158 0.00 0.00 31.08 4.95
452 453 1.457643 TCGGAGGTGCTCATAGGGG 60.458 63.158 0.00 0.00 31.08 4.79
453 454 0.468214 TCTCGGAGGTGCTCATAGGG 60.468 60.000 4.96 0.00 31.08 3.53
454 455 0.958091 CTCTCGGAGGTGCTCATAGG 59.042 60.000 4.96 0.00 31.08 2.57
455 456 1.606668 GTCTCTCGGAGGTGCTCATAG 59.393 57.143 4.96 0.00 31.08 2.23
456 457 1.213182 AGTCTCTCGGAGGTGCTCATA 59.787 52.381 4.96 0.00 31.08 2.15
457 458 0.033601 AGTCTCTCGGAGGTGCTCAT 60.034 55.000 4.96 0.00 31.08 2.90
458 459 0.962855 CAGTCTCTCGGAGGTGCTCA 60.963 60.000 4.96 0.00 31.08 4.26
459 460 0.678366 TCAGTCTCTCGGAGGTGCTC 60.678 60.000 4.96 0.00 0.00 4.26
460 461 0.679640 CTCAGTCTCTCGGAGGTGCT 60.680 60.000 4.96 0.00 35.32 4.40
461 462 1.806568 CTCAGTCTCTCGGAGGTGC 59.193 63.158 4.96 0.00 35.32 5.01
462 463 1.662438 GGCTCAGTCTCTCGGAGGTG 61.662 65.000 4.96 0.00 38.48 4.00
463 464 1.379309 GGCTCAGTCTCTCGGAGGT 60.379 63.158 4.96 0.00 38.48 3.85
464 465 2.477176 CGGCTCAGTCTCTCGGAGG 61.477 68.421 4.96 0.00 38.48 4.30
465 466 2.477176 CCGGCTCAGTCTCTCGGAG 61.477 68.421 0.00 0.00 42.94 4.63
466 467 2.438614 CCGGCTCAGTCTCTCGGA 60.439 66.667 0.00 0.00 42.94 4.55
467 468 4.200283 GCCGGCTCAGTCTCTCGG 62.200 72.222 22.15 0.00 43.13 4.63
468 469 1.448119 TATGCCGGCTCAGTCTCTCG 61.448 60.000 29.70 0.00 0.00 4.04
469 470 0.965439 ATATGCCGGCTCAGTCTCTC 59.035 55.000 29.70 0.00 0.00 3.20
470 471 0.965439 GATATGCCGGCTCAGTCTCT 59.035 55.000 29.70 3.16 0.00 3.10
471 472 0.676184 TGATATGCCGGCTCAGTCTC 59.324 55.000 29.70 15.31 0.00 3.36
472 473 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
473 474 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
474 475 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
475 476 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
476 477 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
477 478 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
478 479 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
479 480 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
480 481 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
481 482 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
482 483 7.623089 GCTTCGTAAATCTCAAGATGATATGCC 60.623 40.741 0.00 0.00 34.49 4.40
483 484 7.232994 GCTTCGTAAATCTCAAGATGATATGC 58.767 38.462 0.00 0.00 34.49 3.14
484 485 7.386025 TGGCTTCGTAAATCTCAAGATGATATG 59.614 37.037 0.00 0.00 34.49 1.78
485 486 7.386299 GTGGCTTCGTAAATCTCAAGATGATAT 59.614 37.037 0.00 0.00 34.49 1.63
486 487 6.701841 GTGGCTTCGTAAATCTCAAGATGATA 59.298 38.462 0.00 0.00 34.49 2.15
487 488 5.525378 GTGGCTTCGTAAATCTCAAGATGAT 59.475 40.000 0.00 0.00 34.49 2.45
488 489 4.870426 GTGGCTTCGTAAATCTCAAGATGA 59.130 41.667 0.00 0.00 34.49 2.92
489 490 4.034510 GGTGGCTTCGTAAATCTCAAGATG 59.965 45.833 0.00 0.00 34.49 2.90
490 491 4.192317 GGTGGCTTCGTAAATCTCAAGAT 58.808 43.478 0.00 0.00 36.07 2.40
491 492 3.007506 TGGTGGCTTCGTAAATCTCAAGA 59.992 43.478 0.00 0.00 0.00 3.02
492 493 3.334691 TGGTGGCTTCGTAAATCTCAAG 58.665 45.455 0.00 0.00 0.00 3.02
493 494 3.410631 TGGTGGCTTCGTAAATCTCAA 57.589 42.857 0.00 0.00 0.00 3.02
494 495 3.627395 ATGGTGGCTTCGTAAATCTCA 57.373 42.857 0.00 0.00 0.00 3.27
495 496 4.058817 CCTATGGTGGCTTCGTAAATCTC 58.941 47.826 0.00 0.00 0.00 2.75
496 497 4.073293 CCTATGGTGGCTTCGTAAATCT 57.927 45.455 0.00 0.00 0.00 2.40
508 509 3.792053 GACGAGGCGCCTATGGTGG 62.792 68.421 32.97 16.50 33.18 4.61
509 510 2.279517 GACGAGGCGCCTATGGTG 60.280 66.667 32.97 18.94 36.10 4.17
510 511 3.900892 CGACGAGGCGCCTATGGT 61.901 66.667 32.97 26.91 0.00 3.55
511 512 3.825833 GACGACGAGGCGCCTATGG 62.826 68.421 32.97 23.64 33.86 2.74
512 513 2.353607 GACGACGAGGCGCCTATG 60.354 66.667 32.97 27.02 33.86 2.23
535 536 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
536 537 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
537 538 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
538 539 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
539 540 0.390472 CGCTTTCAGTGGGAGGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
540 541 1.975327 CGCTTTCAGTGGGAGGAGA 59.025 57.895 0.00 0.00 0.00 3.71
541 542 1.743252 GCGCTTTCAGTGGGAGGAG 60.743 63.158 0.00 0.00 0.00 3.69
542 543 1.841302 ATGCGCTTTCAGTGGGAGGA 61.841 55.000 9.73 0.00 0.00 3.71
543 544 1.372087 GATGCGCTTTCAGTGGGAGG 61.372 60.000 9.73 0.00 0.00 4.30
544 545 1.699656 CGATGCGCTTTCAGTGGGAG 61.700 60.000 9.73 0.00 0.00 4.30
545 546 1.741401 CGATGCGCTTTCAGTGGGA 60.741 57.895 9.73 0.00 0.00 4.37
546 547 2.787249 CGATGCGCTTTCAGTGGG 59.213 61.111 9.73 0.00 0.00 4.61
557 558 1.010797 CAGAATTTCCGGCGATGCG 60.011 57.895 9.30 0.00 0.00 4.73
558 559 0.732571 TTCAGAATTTCCGGCGATGC 59.267 50.000 9.30 0.00 0.00 3.91
559 560 3.698029 ATTTCAGAATTTCCGGCGATG 57.302 42.857 9.30 0.00 0.00 3.84
560 561 5.828299 TTTATTTCAGAATTTCCGGCGAT 57.172 34.783 9.30 0.00 0.00 4.58
561 562 5.588648 AGATTTATTTCAGAATTTCCGGCGA 59.411 36.000 9.30 0.00 0.00 5.54
562 563 5.821204 AGATTTATTTCAGAATTTCCGGCG 58.179 37.500 0.00 0.00 0.00 6.46
563 564 7.228706 TCCTAGATTTATTTCAGAATTTCCGGC 59.771 37.037 0.00 0.00 0.00 6.13
564 565 8.677148 TCCTAGATTTATTTCAGAATTTCCGG 57.323 34.615 0.00 0.00 0.00 5.14
572 573 9.996554 TCGCATTATTCCTAGATTTATTTCAGA 57.003 29.630 0.00 0.00 0.00 3.27
574 575 8.721478 GCTCGCATTATTCCTAGATTTATTTCA 58.279 33.333 0.00 0.00 0.00 2.69
575 576 8.721478 TGCTCGCATTATTCCTAGATTTATTTC 58.279 33.333 0.00 0.00 0.00 2.17
576 577 8.507249 GTGCTCGCATTATTCCTAGATTTATTT 58.493 33.333 0.00 0.00 0.00 1.40
577 578 7.119846 GGTGCTCGCATTATTCCTAGATTTATT 59.880 37.037 0.00 0.00 0.00 1.40
578 579 6.595716 GGTGCTCGCATTATTCCTAGATTTAT 59.404 38.462 0.00 0.00 0.00 1.40
579 580 5.932303 GGTGCTCGCATTATTCCTAGATTTA 59.068 40.000 0.00 0.00 0.00 1.40
580 581 4.757149 GGTGCTCGCATTATTCCTAGATTT 59.243 41.667 0.00 0.00 0.00 2.17
581 582 4.202357 TGGTGCTCGCATTATTCCTAGATT 60.202 41.667 0.00 0.00 0.00 2.40
582 583 3.324846 TGGTGCTCGCATTATTCCTAGAT 59.675 43.478 0.00 0.00 0.00 1.98
583 584 2.698274 TGGTGCTCGCATTATTCCTAGA 59.302 45.455 0.00 0.00 0.00 2.43
584 585 3.111853 TGGTGCTCGCATTATTCCTAG 57.888 47.619 0.00 0.00 0.00 3.02
585 586 3.133901 TCTTGGTGCTCGCATTATTCCTA 59.866 43.478 0.00 0.00 0.00 2.94
586 587 2.092968 TCTTGGTGCTCGCATTATTCCT 60.093 45.455 0.00 0.00 0.00 3.36
587 588 2.288666 TCTTGGTGCTCGCATTATTCC 58.711 47.619 0.00 0.00 0.00 3.01
588 589 4.558538 AATCTTGGTGCTCGCATTATTC 57.441 40.909 0.00 0.00 0.00 1.75
589 590 4.440525 CCAAATCTTGGTGCTCGCATTATT 60.441 41.667 0.00 0.00 45.93 1.40
590 591 3.067180 CCAAATCTTGGTGCTCGCATTAT 59.933 43.478 0.00 0.00 45.93 1.28
591 592 2.423185 CCAAATCTTGGTGCTCGCATTA 59.577 45.455 0.00 0.00 45.93 1.90
592 593 1.203052 CCAAATCTTGGTGCTCGCATT 59.797 47.619 0.00 0.00 45.93 3.56
593 594 0.813184 CCAAATCTTGGTGCTCGCAT 59.187 50.000 0.00 0.00 45.93 4.73
594 595 2.256391 CCAAATCTTGGTGCTCGCA 58.744 52.632 0.00 0.00 45.93 5.10
603 604 1.549203 CCACCAGGGTCCAAATCTTG 58.451 55.000 0.00 0.00 0.00 3.02
615 616 1.613061 GTATCCCCAACCCACCAGG 59.387 63.158 0.00 0.00 43.78 4.45
616 617 1.211567 TGGTATCCCCAACCCACCAG 61.212 60.000 0.00 0.00 41.50 4.00
617 618 1.151565 TGGTATCCCCAACCCACCA 60.152 57.895 0.00 0.00 41.50 4.17
618 619 3.844063 TGGTATCCCCAACCCACC 58.156 61.111 0.00 0.00 41.50 4.61
625 626 0.912487 GGTGGACAGTGGTATCCCCA 60.912 60.000 0.00 0.00 42.51 4.96
626 627 0.620700 AGGTGGACAGTGGTATCCCC 60.621 60.000 0.00 0.00 33.69 4.81
627 628 2.169978 GTTAGGTGGACAGTGGTATCCC 59.830 54.545 0.00 0.00 33.69 3.85
628 629 2.169978 GGTTAGGTGGACAGTGGTATCC 59.830 54.545 0.00 0.00 35.37 2.59
629 630 2.835764 TGGTTAGGTGGACAGTGGTATC 59.164 50.000 0.00 0.00 0.00 2.24
630 631 2.910544 TGGTTAGGTGGACAGTGGTAT 58.089 47.619 0.00 0.00 0.00 2.73
631 632 2.402182 TGGTTAGGTGGACAGTGGTA 57.598 50.000 0.00 0.00 0.00 3.25
632 633 1.628846 GATGGTTAGGTGGACAGTGGT 59.371 52.381 0.00 0.00 0.00 4.16
633 634 1.909302 AGATGGTTAGGTGGACAGTGG 59.091 52.381 0.00 0.00 0.00 4.00
634 635 2.567169 TGAGATGGTTAGGTGGACAGTG 59.433 50.000 0.00 0.00 0.00 3.66
635 636 2.902608 TGAGATGGTTAGGTGGACAGT 58.097 47.619 0.00 0.00 0.00 3.55
636 637 3.600388 GTTGAGATGGTTAGGTGGACAG 58.400 50.000 0.00 0.00 0.00 3.51
637 638 2.304761 GGTTGAGATGGTTAGGTGGACA 59.695 50.000 0.00 0.00 0.00 4.02
638 639 2.304761 TGGTTGAGATGGTTAGGTGGAC 59.695 50.000 0.00 0.00 0.00 4.02
639 640 2.304761 GTGGTTGAGATGGTTAGGTGGA 59.695 50.000 0.00 0.00 0.00 4.02
640 641 2.039746 TGTGGTTGAGATGGTTAGGTGG 59.960 50.000 0.00 0.00 0.00 4.61
641 642 3.338249 CTGTGGTTGAGATGGTTAGGTG 58.662 50.000 0.00 0.00 0.00 4.00
642 643 2.305927 CCTGTGGTTGAGATGGTTAGGT 59.694 50.000 0.00 0.00 0.00 3.08
643 644 2.305927 ACCTGTGGTTGAGATGGTTAGG 59.694 50.000 0.00 0.00 27.29 2.69
644 645 3.703001 ACCTGTGGTTGAGATGGTTAG 57.297 47.619 0.00 0.00 27.29 2.34
656 657 2.851263 TAAGCGAATCAACCTGTGGT 57.149 45.000 0.00 0.00 37.65 4.16
657 658 3.181497 CCAATAAGCGAATCAACCTGTGG 60.181 47.826 0.00 0.00 0.00 4.17
658 659 3.181497 CCCAATAAGCGAATCAACCTGTG 60.181 47.826 0.00 0.00 0.00 3.66
659 660 3.016736 CCCAATAAGCGAATCAACCTGT 58.983 45.455 0.00 0.00 0.00 4.00
660 661 3.016736 ACCCAATAAGCGAATCAACCTG 58.983 45.455 0.00 0.00 0.00 4.00
661 662 3.366052 ACCCAATAAGCGAATCAACCT 57.634 42.857 0.00 0.00 0.00 3.50
662 663 4.450082 AAACCCAATAAGCGAATCAACC 57.550 40.909 0.00 0.00 0.00 3.77
663 664 8.474006 AAATTAAACCCAATAAGCGAATCAAC 57.526 30.769 0.00 0.00 0.00 3.18
664 665 8.307483 TGAAATTAAACCCAATAAGCGAATCAA 58.693 29.630 0.00 0.00 0.00 2.57
665 666 7.831753 TGAAATTAAACCCAATAAGCGAATCA 58.168 30.769 0.00 0.00 0.00 2.57
666 667 8.696410 TTGAAATTAAACCCAATAAGCGAATC 57.304 30.769 0.00 0.00 0.00 2.52
667 668 7.763985 CCTTGAAATTAAACCCAATAAGCGAAT 59.236 33.333 0.00 0.00 0.00 3.34
668 669 7.039644 TCCTTGAAATTAAACCCAATAAGCGAA 60.040 33.333 0.00 0.00 0.00 4.70
669 670 6.434652 TCCTTGAAATTAAACCCAATAAGCGA 59.565 34.615 0.00 0.00 0.00 4.93
670 671 6.626302 TCCTTGAAATTAAACCCAATAAGCG 58.374 36.000 0.00 0.00 0.00 4.68
671 672 7.836842 TCTCCTTGAAATTAAACCCAATAAGC 58.163 34.615 0.00 0.00 0.00 3.09
672 673 9.860898 CTTCTCCTTGAAATTAAACCCAATAAG 57.139 33.333 0.00 0.00 33.79 1.73
673 674 9.594936 TCTTCTCCTTGAAATTAAACCCAATAA 57.405 29.630 0.00 0.00 33.79 1.40
674 675 9.594936 TTCTTCTCCTTGAAATTAAACCCAATA 57.405 29.630 0.00 0.00 33.79 1.90
675 676 8.491045 TTCTTCTCCTTGAAATTAAACCCAAT 57.509 30.769 0.00 0.00 33.79 3.16
676 677 7.906199 TTCTTCTCCTTGAAATTAAACCCAA 57.094 32.000 0.00 0.00 33.79 4.12
677 678 7.906199 TTTCTTCTCCTTGAAATTAAACCCA 57.094 32.000 0.00 0.00 33.79 4.51
683 684 8.739972 GGTGCTATTTTCTTCTCCTTGAAATTA 58.260 33.333 0.00 0.00 33.79 1.40
684 685 7.310052 GGGTGCTATTTTCTTCTCCTTGAAATT 60.310 37.037 0.00 0.00 33.79 1.82
685 686 6.153510 GGGTGCTATTTTCTTCTCCTTGAAAT 59.846 38.462 0.00 0.00 33.79 2.17
686 687 5.476945 GGGTGCTATTTTCTTCTCCTTGAAA 59.523 40.000 0.00 0.00 33.79 2.69
687 688 5.010282 GGGTGCTATTTTCTTCTCCTTGAA 58.990 41.667 0.00 0.00 0.00 2.69
688 689 4.589908 GGGTGCTATTTTCTTCTCCTTGA 58.410 43.478 0.00 0.00 0.00 3.02
689 690 3.375299 CGGGTGCTATTTTCTTCTCCTTG 59.625 47.826 0.00 0.00 0.00 3.61
690 691 3.610911 CGGGTGCTATTTTCTTCTCCTT 58.389 45.455 0.00 0.00 0.00 3.36
691 692 2.681097 GCGGGTGCTATTTTCTTCTCCT 60.681 50.000 0.00 0.00 38.39 3.69
692 693 1.671328 GCGGGTGCTATTTTCTTCTCC 59.329 52.381 0.00 0.00 38.39 3.71
693 694 2.356135 TGCGGGTGCTATTTTCTTCTC 58.644 47.619 0.00 0.00 43.34 2.87
694 695 2.489938 TGCGGGTGCTATTTTCTTCT 57.510 45.000 0.00 0.00 43.34 2.85
695 696 3.569250 TTTGCGGGTGCTATTTTCTTC 57.431 42.857 0.00 0.00 43.34 2.87
696 697 4.329462 TTTTTGCGGGTGCTATTTTCTT 57.671 36.364 0.00 0.00 43.34 2.52
756 757 4.038282 AGGGGAAAGCGTAAACGAATTTTT 59.962 37.500 6.71 1.19 43.02 1.94
757 758 3.570975 AGGGGAAAGCGTAAACGAATTTT 59.429 39.130 6.71 3.56 43.02 1.82
758 759 3.057806 CAGGGGAAAGCGTAAACGAATTT 60.058 43.478 6.71 6.29 43.02 1.82
759 760 2.486592 CAGGGGAAAGCGTAAACGAATT 59.513 45.455 6.71 0.00 43.02 2.17
760 761 2.081462 CAGGGGAAAGCGTAAACGAAT 58.919 47.619 6.71 0.00 43.02 3.34
761 762 1.202675 ACAGGGGAAAGCGTAAACGAA 60.203 47.619 6.71 0.00 43.02 3.85
762 763 0.393820 ACAGGGGAAAGCGTAAACGA 59.606 50.000 6.71 0.00 43.02 3.85
763 764 0.515564 CACAGGGGAAAGCGTAAACG 59.484 55.000 0.00 0.00 43.27 3.60
764 765 0.879090 CCACAGGGGAAAGCGTAAAC 59.121 55.000 0.00 0.00 40.01 2.01
765 766 0.475044 ACCACAGGGGAAAGCGTAAA 59.525 50.000 0.00 0.00 41.15 2.01
766 767 0.475044 AACCACAGGGGAAAGCGTAA 59.525 50.000 0.00 0.00 41.15 3.18
767 768 0.035739 GAACCACAGGGGAAAGCGTA 59.964 55.000 0.00 0.00 41.15 4.42
768 769 1.228154 GAACCACAGGGGAAAGCGT 60.228 57.895 0.00 0.00 41.15 5.07
769 770 2.325082 CGAACCACAGGGGAAAGCG 61.325 63.158 0.00 0.00 41.15 4.68
770 771 2.626780 GCGAACCACAGGGGAAAGC 61.627 63.158 0.00 0.00 41.15 3.51
771 772 2.325082 CGCGAACCACAGGGGAAAG 61.325 63.158 0.00 0.00 41.15 2.62
772 773 2.281208 CGCGAACCACAGGGGAAA 60.281 61.111 0.00 0.00 41.15 3.13
773 774 3.524648 GACGCGAACCACAGGGGAA 62.525 63.158 15.93 0.00 41.15 3.97
774 775 3.998672 GACGCGAACCACAGGGGA 61.999 66.667 15.93 0.00 41.15 4.81
775 776 3.605749 ATGACGCGAACCACAGGGG 62.606 63.158 15.93 0.00 44.81 4.79
776 777 2.047274 ATGACGCGAACCACAGGG 60.047 61.111 15.93 0.00 41.29 4.45
777 778 1.079819 AGATGACGCGAACCACAGG 60.080 57.895 15.93 0.00 0.00 4.00
778 779 0.667487 ACAGATGACGCGAACCACAG 60.667 55.000 15.93 0.00 0.00 3.66
779 780 0.249699 AACAGATGACGCGAACCACA 60.250 50.000 15.93 5.11 0.00 4.17
780 781 0.163788 CAACAGATGACGCGAACCAC 59.836 55.000 15.93 0.00 0.00 4.16
781 782 1.565156 GCAACAGATGACGCGAACCA 61.565 55.000 15.93 8.21 0.00 3.67
782 783 1.132640 GCAACAGATGACGCGAACC 59.867 57.895 15.93 1.42 0.00 3.62
783 784 4.725758 GCAACAGATGACGCGAAC 57.274 55.556 15.93 7.16 0.00 3.95
787 788 0.179240 CTGAACGCAACAGATGACGC 60.179 55.000 0.00 0.00 37.54 5.19
788 789 0.179240 GCTGAACGCAACAGATGACG 60.179 55.000 8.00 0.00 37.54 4.35
789 790 0.166814 GGCTGAACGCAACAGATGAC 59.833 55.000 8.00 0.00 41.67 3.06
790 791 0.035317 AGGCTGAACGCAACAGATGA 59.965 50.000 8.00 0.00 41.67 2.92
791 792 0.877071 AAGGCTGAACGCAACAGATG 59.123 50.000 8.00 0.00 41.67 2.90
792 793 1.160137 GAAGGCTGAACGCAACAGAT 58.840 50.000 8.00 0.00 41.67 2.90
793 794 0.884704 GGAAGGCTGAACGCAACAGA 60.885 55.000 8.00 0.00 41.67 3.41
794 795 0.886490 AGGAAGGCTGAACGCAACAG 60.886 55.000 0.00 0.00 41.67 3.16
795 796 0.884704 GAGGAAGGCTGAACGCAACA 60.885 55.000 0.00 0.00 41.67 3.33
796 797 1.578206 GGAGGAAGGCTGAACGCAAC 61.578 60.000 0.00 0.00 41.67 4.17
797 798 1.302511 GGAGGAAGGCTGAACGCAA 60.303 57.895 0.00 0.00 41.67 4.85
798 799 2.217038 AGGAGGAAGGCTGAACGCA 61.217 57.895 0.00 0.00 41.67 5.24
799 800 1.743252 CAGGAGGAAGGCTGAACGC 60.743 63.158 0.00 0.00 38.13 4.84
800 801 1.743252 GCAGGAGGAAGGCTGAACG 60.743 63.158 0.00 0.00 0.00 3.95
801 802 1.377856 GGCAGGAGGAAGGCTGAAC 60.378 63.158 0.00 0.00 0.00 3.18
802 803 2.606587 GGGCAGGAGGAAGGCTGAA 61.607 63.158 0.00 0.00 0.00 3.02
803 804 3.011517 GGGCAGGAGGAAGGCTGA 61.012 66.667 0.00 0.00 0.00 4.26
804 805 4.120755 GGGGCAGGAGGAAGGCTG 62.121 72.222 0.00 0.00 0.00 4.85
805 806 4.361429 AGGGGCAGGAGGAAGGCT 62.361 66.667 0.00 0.00 0.00 4.58
806 807 3.803162 GAGGGGCAGGAGGAAGGC 61.803 72.222 0.00 0.00 0.00 4.35
807 808 3.093172 GGAGGGGCAGGAGGAAGG 61.093 72.222 0.00 0.00 0.00 3.46
808 809 3.093172 GGGAGGGGCAGGAGGAAG 61.093 72.222 0.00 0.00 0.00 3.46
809 810 4.760220 GGGGAGGGGCAGGAGGAA 62.760 72.222 0.00 0.00 0.00 3.36
813 814 4.995058 AAACGGGGAGGGGCAGGA 62.995 66.667 0.00 0.00 0.00 3.86
814 815 4.426313 GAAACGGGGAGGGGCAGG 62.426 72.222 0.00 0.00 0.00 4.85
815 816 4.426313 GGAAACGGGGAGGGGCAG 62.426 72.222 0.00 0.00 0.00 4.85
819 820 4.043100 GTGGGGAAACGGGGAGGG 62.043 72.222 0.00 0.00 0.00 4.30
820 821 2.933834 AGTGGGGAAACGGGGAGG 60.934 66.667 0.00 0.00 0.00 4.30
821 822 2.669240 GAGTGGGGAAACGGGGAG 59.331 66.667 0.00 0.00 0.00 4.30
822 823 2.931649 GGAGTGGGGAAACGGGGA 60.932 66.667 0.00 0.00 0.00 4.81
823 824 4.043100 GGGAGTGGGGAAACGGGG 62.043 72.222 0.00 0.00 0.00 5.73
824 825 4.043100 GGGGAGTGGGGAAACGGG 62.043 72.222 0.00 0.00 0.00 5.28
825 826 4.043100 GGGGGAGTGGGGAAACGG 62.043 72.222 0.00 0.00 0.00 4.44
826 827 2.933834 AGGGGGAGTGGGGAAACG 60.934 66.667 0.00 0.00 0.00 3.60
827 828 2.613482 GGAGGGGGAGTGGGGAAAC 61.613 68.421 0.00 0.00 0.00 2.78
828 829 2.204244 GGAGGGGGAGTGGGGAAA 60.204 66.667 0.00 0.00 0.00 3.13
829 830 2.782997 GAAGGAGGGGGAGTGGGGAA 62.783 65.000 0.00 0.00 0.00 3.97
830 831 3.216371 AAGGAGGGGGAGTGGGGA 61.216 66.667 0.00 0.00 0.00 4.81
831 832 2.692741 GAAGGAGGGGGAGTGGGG 60.693 72.222 0.00 0.00 0.00 4.96
832 833 2.692741 GGAAGGAGGGGGAGTGGG 60.693 72.222 0.00 0.00 0.00 4.61
833 834 2.692741 GGGAAGGAGGGGGAGTGG 60.693 72.222 0.00 0.00 0.00 4.00
834 835 2.692741 GGGGAAGGAGGGGGAGTG 60.693 72.222 0.00 0.00 0.00 3.51
835 836 3.216371 TGGGGAAGGAGGGGGAGT 61.216 66.667 0.00 0.00 0.00 3.85
836 837 2.367512 CTGGGGAAGGAGGGGGAG 60.368 72.222 0.00 0.00 0.00 4.30
861 862 1.257743 CGAGGAAGTGGAGTGGAAGA 58.742 55.000 0.00 0.00 0.00 2.87
902 908 1.064685 CCTAGCCCGACCTTGGATTTT 60.065 52.381 0.00 0.00 30.55 1.82
1132 1138 1.073199 GTGGACAGGAGGTGGGTTG 59.927 63.158 0.00 0.00 0.00 3.77
1141 1147 4.671590 TCGGCGAGGTGGACAGGA 62.672 66.667 4.99 0.00 0.00 3.86
1146 1152 3.833645 CGGATTCGGCGAGGTGGA 61.834 66.667 10.46 0.00 0.00 4.02
1165 1171 2.010582 GCGCAGGGAGAGAGTTCGAT 62.011 60.000 0.30 0.00 0.00 3.59
1166 1172 2.701780 GCGCAGGGAGAGAGTTCGA 61.702 63.158 0.30 0.00 0.00 3.71
1344 1350 3.789858 CTCACTGCTGCTGCTGCG 61.790 66.667 23.38 19.71 43.34 5.18
1373 1382 2.548295 GGTTTCGCAACGCCCTTCA 61.548 57.895 0.00 0.00 33.13 3.02
1383 1392 1.080501 CAGAGAGCTCGGTTTCGCA 60.081 57.895 8.37 0.00 36.13 5.10
1497 1506 3.319137 AACATACGCTCTTCTTGCTCA 57.681 42.857 0.00 0.00 0.00 4.26
1540 1549 9.202273 CAGAGCTATCATAAGAAAATAGTGTCC 57.798 37.037 0.00 0.00 0.00 4.02
1542 1551 9.539825 CACAGAGCTATCATAAGAAAATAGTGT 57.460 33.333 0.00 0.00 0.00 3.55
1550 1559 7.278135 AGCAATTCACAGAGCTATCATAAGAA 58.722 34.615 0.00 0.00 35.19 2.52
1569 1578 1.891150 CAAGAACAGGGCAGAGCAATT 59.109 47.619 0.00 0.00 0.00 2.32
1632 1641 6.430000 ACATAGGAAGGATTTAACACACACAC 59.570 38.462 0.00 0.00 0.00 3.82
1633 1642 6.539173 ACATAGGAAGGATTTAACACACACA 58.461 36.000 0.00 0.00 0.00 3.72
1725 1734 9.679661 TGGTACATTGATGTCATAAATACTGTT 57.320 29.630 0.00 0.00 41.97 3.16
1747 1756 4.957954 AGTTACCACATACCTTCGATGGTA 59.042 41.667 26.93 26.93 41.90 3.25
1796 1805 5.994668 TGCACAACTACATTTCATCACACTA 59.005 36.000 0.00 0.00 0.00 2.74
2040 2049 7.907841 TTAGCACACTAATATAACCTCTGGA 57.092 36.000 0.00 0.00 33.35 3.86
2104 2117 6.868864 AGTAACACTGTGCTATTCACTAACTG 59.131 38.462 7.90 0.00 45.81 3.16
2326 2359 2.772077 TGTGCATAGGTAAGGCGAAA 57.228 45.000 0.00 0.00 0.00 3.46
2335 2368 6.720112 ATGCTGATATTTTTGTGCATAGGT 57.280 33.333 0.00 0.00 39.04 3.08
2492 2666 6.851330 CGGTTTCACAGAAACTAAATTCAGAC 59.149 38.462 18.65 1.90 0.00 3.51
2553 2727 9.507329 AGCATACAGATAAAGTTTGAAGAAGAA 57.493 29.630 0.00 0.00 0.00 2.52
2591 2765 4.916983 TCAGTCAAAAACAGGTCAATGG 57.083 40.909 0.00 0.00 0.00 3.16
2621 2795 7.581213 TTGTGGTATGTTTCTGAAGACAATT 57.419 32.000 8.65 0.00 0.00 2.32
2706 2880 1.677576 TGCTCACCTGCAAGAAAACAG 59.322 47.619 0.00 0.00 40.29 3.16
2851 3025 3.559655 CACTGAACGATGAAACCTCAACA 59.440 43.478 0.00 0.00 34.49 3.33
2997 3177 1.906105 AACACGGGGCACATACGGAT 61.906 55.000 0.00 0.00 0.00 4.18
2999 3179 2.046700 AACACGGGGCACATACGG 60.047 61.111 0.00 0.00 0.00 4.02
3087 3331 3.436470 AGGACAGCCTAACAACCATTTGT 60.436 43.478 0.00 0.00 44.74 2.83
3117 3361 6.487103 ACAGTTCTTAATTTGCTATTAGCGC 58.513 36.000 10.94 0.00 46.26 5.92
3191 3436 4.100189 AGTGATCAGGAGTTATACAGCACC 59.900 45.833 0.00 0.00 0.00 5.01
3455 3702 6.859420 TTTCAATTAAGGAAAGCAAAAGGC 57.141 33.333 2.00 0.00 45.30 4.35
3525 3773 4.127171 TCACTCTGTCCTTTGTGCTTTAC 58.873 43.478 0.00 0.00 0.00 2.01
3617 3865 1.301953 TGCGAGAAGTGCACAGCAT 60.302 52.632 21.04 1.45 41.91 3.79
3623 3871 0.679505 AGTAAGGTGCGAGAAGTGCA 59.320 50.000 0.00 0.00 40.70 4.57
3636 3884 4.278170 TGTTCTTGCATTTGTCCAGTAAGG 59.722 41.667 0.00 0.00 39.47 2.69
3646 3894 8.975410 TCTCTTGAAATATGTTCTTGCATTTG 57.025 30.769 0.00 0.00 0.00 2.32
3723 3983 2.159338 GGAATGTTTGCACATGCGAGAT 60.159 45.455 0.00 0.00 43.34 2.75
3724 3984 1.199789 GGAATGTTTGCACATGCGAGA 59.800 47.619 0.00 0.00 43.34 4.04
3739 3999 7.433708 TGTTAACTGTGTATCACAAGGAATG 57.566 36.000 7.22 0.00 44.08 2.67
3781 4041 4.517453 AGATCAGGAGCTACACGATAACTC 59.483 45.833 0.00 0.00 0.00 3.01
3789 4049 6.208599 AGCTATTTCTAGATCAGGAGCTACAC 59.791 42.308 0.00 0.00 37.26 2.90
3828 4088 3.450457 TGTTGTTTCCTGAACTGCCATTT 59.550 39.130 0.00 0.00 39.08 2.32
3841 4101 6.430451 CAACACTAGATCAGTTGTTGTTTCC 58.570 40.000 18.30 0.00 39.20 3.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.