Multiple sequence alignment - TraesCS3D01G386300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G386300 chr3D 100.000 3509 0 0 1 3509 501791728 501788220 0.000000e+00 6481.0
1 TraesCS3D01G386300 chr3D 92.372 1796 111 15 877 2653 501513134 501511346 0.000000e+00 2534.0
2 TraesCS3D01G386300 chr3D 91.400 1721 103 21 877 2559 501478870 501477157 0.000000e+00 2316.0
3 TraesCS3D01G386300 chr3D 90.406 271 21 3 3004 3271 499955238 499955506 5.570000e-93 351.0
4 TraesCS3D01G386300 chr3D 89.139 267 23 6 2580 2843 305497151 305497414 9.390000e-86 327.0
5 TraesCS3D01G386300 chr3D 95.789 190 7 1 1 190 20143504 20143692 4.400000e-79 305.0
6 TraesCS3D01G386300 chr3D 89.744 195 18 1 1 193 143230997 143230803 7.520000e-62 248.0
7 TraesCS3D01G386300 chr3D 95.349 43 2 0 3263 3305 499955528 499955570 6.290000e-08 69.4
8 TraesCS3D01G386300 chr3B 96.033 2042 64 5 542 2568 663087053 663085014 0.000000e+00 3306.0
9 TraesCS3D01G386300 chr3B 91.677 1622 114 14 880 2486 663037630 663039245 0.000000e+00 2228.0
10 TraesCS3D01G386300 chr3B 95.480 354 11 2 190 543 663087562 663087214 8.510000e-156 560.0
11 TraesCS3D01G386300 chr3B 85.816 141 16 4 3369 3509 463488991 463489127 2.820000e-31 147.0
12 TraesCS3D01G386300 chr3B 93.069 101 6 1 2881 2981 663085015 663084916 2.820000e-31 147.0
13 TraesCS3D01G386300 chr3B 93.182 44 3 0 3266 3309 685624694 685624651 8.130000e-07 65.8
14 TraesCS3D01G386300 chr3B 93.182 44 3 0 3266 3309 685653264 685653221 8.130000e-07 65.8
15 TraesCS3D01G386300 chr3A 95.446 1625 70 2 866 2486 641172492 641170868 0.000000e+00 2588.0
16 TraesCS3D01G386300 chr3A 92.609 1556 76 14 934 2486 641638846 641640365 0.000000e+00 2200.0
17 TraesCS3D01G386300 chr3A 94.305 597 28 3 189 785 641173422 641172832 0.000000e+00 909.0
18 TraesCS3D01G386300 chr3A 87.126 334 37 5 2863 3193 641640980 641641310 1.190000e-99 374.0
19 TraesCS3D01G386300 chr3A 92.000 125 9 1 2417 2541 641640850 641640973 1.290000e-39 174.0
20 TraesCS3D01G386300 chr6D 83.114 1445 231 9 1024 2463 6173502 6174938 0.000000e+00 1304.0
21 TraesCS3D01G386300 chr6D 93.684 190 11 1 1 190 47078748 47078560 2.060000e-72 283.0
22 TraesCS3D01G386300 chr6D 90.722 194 14 3 1 190 16177883 16177690 4.490000e-64 255.0
23 TraesCS3D01G386300 chr6D 88.276 145 12 4 3369 3508 444302353 444302497 6.020000e-38 169.0
24 TraesCS3D01G386300 chr6D 74.091 220 52 5 3010 3226 444301653 444301870 6.240000e-13 86.1
25 TraesCS3D01G386300 chr7D 82.600 1477 231 19 1025 2486 40033365 40031900 0.000000e+00 1280.0
26 TraesCS3D01G386300 chr7D 92.147 191 11 3 1 190 506889033 506888846 2.080000e-67 267.0
27 TraesCS3D01G386300 chr7D 89.231 195 16 4 1 192 79977483 79977675 4.530000e-59 239.0
28 TraesCS3D01G386300 chr6B 82.245 1470 244 15 1024 2487 11246689 11245231 0.000000e+00 1253.0
29 TraesCS3D01G386300 chr6B 86.713 143 14 5 3369 3506 133839960 133839818 1.690000e-33 154.0
30 TraesCS3D01G386300 chr2B 90.189 265 22 4 2580 2842 539710489 539710227 3.350000e-90 342.0
31 TraesCS3D01G386300 chr2B 73.864 264 62 6 3003 3264 183957297 183957039 8.020000e-17 99.0
32 TraesCS3D01G386300 chr2D 89.219 269 26 3 2581 2846 380694551 380694283 2.020000e-87 333.0
33 TraesCS3D01G386300 chr2A 89.695 262 25 2 2580 2839 606519324 606519063 2.020000e-87 333.0
34 TraesCS3D01G386300 chr2A 85.616 146 15 5 3369 3509 326241489 326241345 7.850000e-32 148.0
35 TraesCS3D01G386300 chr2A 80.851 94 12 3 3263 3356 151248198 151248285 6.290000e-08 69.4
36 TraesCS3D01G386300 chr6A 89.313 262 26 2 2580 2839 410575773 410576034 9.390000e-86 327.0
37 TraesCS3D01G386300 chr4A 89.313 262 26 2 2581 2840 674616794 674617055 9.390000e-86 327.0
38 TraesCS3D01G386300 chr4A 80.228 263 42 9 3009 3267 600761447 600761703 4.620000e-44 189.0
39 TraesCS3D01G386300 chr4A 87.234 141 17 1 3369 3509 153258797 153258936 3.630000e-35 159.0
40 TraesCS3D01G386300 chr4B 89.015 264 27 2 2581 2842 22857617 22857354 3.380000e-85 326.0
41 TraesCS3D01G386300 chr5A 87.368 285 28 7 2559 2839 659828745 659829025 1.570000e-83 320.0
42 TraesCS3D01G386300 chr5A 80.608 263 41 9 3009 3267 616590753 616590497 9.940000e-46 195.0
43 TraesCS3D01G386300 chr5A 80.228 263 42 9 3009 3267 616604965 616604709 4.620000e-44 189.0
44 TraesCS3D01G386300 chr7A 87.636 275 32 2 2581 2853 669666617 669666343 5.650000e-83 318.0
45 TraesCS3D01G386300 chr7A 93.103 174 10 1 20 193 118334630 118334801 1.620000e-63 254.0
46 TraesCS3D01G386300 chr7A 89.899 198 12 5 1 192 503434235 503434430 7.520000e-62 248.0
47 TraesCS3D01G386300 chr7A 80.608 263 41 9 3009 3267 694732779 694733035 9.940000e-46 195.0
48 TraesCS3D01G386300 chr7A 80.228 263 42 9 3009 3267 694727592 694727848 4.620000e-44 189.0
49 TraesCS3D01G386300 chr5D 83.871 310 34 8 3010 3308 241828833 241829137 7.420000e-72 281.0
50 TraesCS3D01G386300 chr5D 90.141 142 11 3 3369 3509 386153306 386153445 7.740000e-42 182.0
51 TraesCS3D01G386300 chr1D 91.960 199 9 2 1 192 468133719 468133917 4.460000e-69 272.0
52 TraesCS3D01G386300 chr1D 88.321 137 11 4 3373 3509 16738775 16738906 3.630000e-35 159.0
53 TraesCS3D01G386300 chr1A 79.562 274 44 10 3000 3267 569978216 569978483 5.980000e-43 185.0
54 TraesCS3D01G386300 chr1A 88.028 142 15 2 3369 3509 61021871 61022011 2.170000e-37 167.0
55 TraesCS3D01G386300 chr4D 89.041 146 11 4 3369 3509 351739351 351739496 3.600000e-40 176.0
56 TraesCS3D01G386300 chr7B 82.692 104 12 5 3265 3362 613431334 613431231 1.740000e-13 87.9
57 TraesCS3D01G386300 chr7B 79.279 111 17 1 3265 3369 613366378 613366268 4.860000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G386300 chr3D 501788220 501791728 3508 True 6481.000000 6481 100.000000 1 3509 1 chr3D.!!$R4 3508
1 TraesCS3D01G386300 chr3D 501511346 501513134 1788 True 2534.000000 2534 92.372000 877 2653 1 chr3D.!!$R3 1776
2 TraesCS3D01G386300 chr3D 501477157 501478870 1713 True 2316.000000 2316 91.400000 877 2559 1 chr3D.!!$R2 1682
3 TraesCS3D01G386300 chr3B 663037630 663039245 1615 False 2228.000000 2228 91.677000 880 2486 1 chr3B.!!$F2 1606
4 TraesCS3D01G386300 chr3B 663084916 663087562 2646 True 1337.666667 3306 94.860667 190 2981 3 chr3B.!!$R3 2791
5 TraesCS3D01G386300 chr3A 641170868 641173422 2554 True 1748.500000 2588 94.875500 189 2486 2 chr3A.!!$R1 2297
6 TraesCS3D01G386300 chr3A 641638846 641641310 2464 False 916.000000 2200 90.578333 934 3193 3 chr3A.!!$F1 2259
7 TraesCS3D01G386300 chr6D 6173502 6174938 1436 False 1304.000000 1304 83.114000 1024 2463 1 chr6D.!!$F1 1439
8 TraesCS3D01G386300 chr7D 40031900 40033365 1465 True 1280.000000 1280 82.600000 1025 2486 1 chr7D.!!$R1 1461
9 TraesCS3D01G386300 chr6B 11245231 11246689 1458 True 1253.000000 1253 82.245000 1024 2487 1 chr6B.!!$R1 1463

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
148 149 0.108138 ACCTGGCGCTGTATTCTGAC 60.108 55.0 7.64 0.0 0.00 3.51 F
149 150 0.176680 CCTGGCGCTGTATTCTGACT 59.823 55.0 7.64 0.0 0.00 3.41 F
1209 1666 0.669077 AGCCGATGGACGTGATACTC 59.331 55.0 0.00 0.0 40.78 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1209 1666 1.136984 GTGAGTGCGTACCTCCTCG 59.863 63.158 0.00 0.0 0.00 4.63 R
2025 2489 2.607635 TGCACTTTCTTCTGTGACGTTC 59.392 45.455 0.00 0.0 36.38 3.95 R
3184 4243 1.549170 GCCGATCGGAGGGTATAACAT 59.451 52.381 37.64 0.0 37.50 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.296365 TCGAATCGTAGTTCACATAGTAGG 57.704 41.667 1.52 0.00 0.00 3.18
24 25 6.051074 TCGAATCGTAGTTCACATAGTAGGA 58.949 40.000 1.52 0.00 0.00 2.94
25 26 6.539826 TCGAATCGTAGTTCACATAGTAGGAA 59.460 38.462 1.52 0.00 0.00 3.36
26 27 7.066163 TCGAATCGTAGTTCACATAGTAGGAAA 59.934 37.037 1.52 0.00 0.00 3.13
27 28 7.699391 CGAATCGTAGTTCACATAGTAGGAAAA 59.301 37.037 0.00 0.00 0.00 2.29
28 29 9.362539 GAATCGTAGTTCACATAGTAGGAAAAA 57.637 33.333 0.00 0.00 0.00 1.94
50 51 5.620098 AAAACAAATGAAATATAGCGCGC 57.380 34.783 26.66 26.66 0.00 6.86
51 52 3.268013 ACAAATGAAATATAGCGCGCC 57.732 42.857 30.33 11.28 0.00 6.53
52 53 2.878406 ACAAATGAAATATAGCGCGCCT 59.122 40.909 30.33 18.68 0.00 5.52
53 54 3.228749 CAAATGAAATATAGCGCGCCTG 58.771 45.455 30.33 0.89 0.00 4.85
54 55 0.798776 ATGAAATATAGCGCGCCTGC 59.201 50.000 30.33 11.01 37.91 4.85
56 57 0.164647 GAAATATAGCGCGCCTGCTG 59.835 55.000 30.33 0.00 46.70 4.41
57 58 1.230635 AAATATAGCGCGCCTGCTGG 61.231 55.000 30.33 5.03 46.70 4.85
58 59 2.099652 AATATAGCGCGCCTGCTGGA 62.100 55.000 30.33 6.69 46.70 3.86
59 60 2.498291 ATATAGCGCGCCTGCTGGAG 62.498 60.000 30.33 11.77 46.70 3.86
79 80 3.573491 GCTCGGGCGCGCTTTATT 61.573 61.111 32.29 0.00 0.00 1.40
80 81 3.098555 CTCGGGCGCGCTTTATTT 58.901 55.556 32.29 0.00 0.00 1.40
81 82 1.427819 CTCGGGCGCGCTTTATTTT 59.572 52.632 32.29 0.00 0.00 1.82
82 83 0.861450 CTCGGGCGCGCTTTATTTTG 60.861 55.000 32.29 11.57 0.00 2.44
83 84 2.504653 CGGGCGCGCTTTATTTTGC 61.505 57.895 32.29 10.56 0.00 3.68
89 90 3.383861 GCTTTATTTTGCGGCGGC 58.616 55.556 9.78 9.68 40.52 6.53
90 91 2.164663 GCTTTATTTTGCGGCGGCC 61.165 57.895 14.25 9.54 38.85 6.13
129 130 4.029186 CGCGCAAAAGCTGGCTCA 62.029 61.111 8.75 0.00 34.40 4.26
130 131 2.429739 GCGCAAAAGCTGGCTCAC 60.430 61.111 0.30 0.00 0.00 3.51
131 132 2.256461 CGCAAAAGCTGGCTCACC 59.744 61.111 0.00 0.00 0.00 4.02
132 133 2.263741 CGCAAAAGCTGGCTCACCT 61.264 57.895 0.00 0.00 36.63 4.00
133 134 1.288127 GCAAAAGCTGGCTCACCTG 59.712 57.895 0.00 0.00 37.92 4.00
134 135 1.962144 CAAAAGCTGGCTCACCTGG 59.038 57.895 0.00 0.00 35.49 4.45
135 136 1.905354 AAAAGCTGGCTCACCTGGC 60.905 57.895 0.00 0.00 35.49 4.85
136 137 4.711949 AAGCTGGCTCACCTGGCG 62.712 66.667 0.00 0.00 39.31 5.69
141 142 4.082523 GGCTCACCTGGCGCTGTA 62.083 66.667 7.64 0.00 0.00 2.74
142 143 2.187946 GCTCACCTGGCGCTGTAT 59.812 61.111 7.64 0.00 0.00 2.29
143 144 1.450312 GCTCACCTGGCGCTGTATT 60.450 57.895 7.64 0.00 0.00 1.89
144 145 1.432270 GCTCACCTGGCGCTGTATTC 61.432 60.000 7.64 0.00 0.00 1.75
145 146 0.176680 CTCACCTGGCGCTGTATTCT 59.823 55.000 7.64 0.00 0.00 2.40
146 147 0.108186 TCACCTGGCGCTGTATTCTG 60.108 55.000 7.64 0.00 0.00 3.02
147 148 0.108186 CACCTGGCGCTGTATTCTGA 60.108 55.000 7.64 0.00 0.00 3.27
148 149 0.108138 ACCTGGCGCTGTATTCTGAC 60.108 55.000 7.64 0.00 0.00 3.51
149 150 0.176680 CCTGGCGCTGTATTCTGACT 59.823 55.000 7.64 0.00 0.00 3.41
150 151 1.406069 CCTGGCGCTGTATTCTGACTT 60.406 52.381 7.64 0.00 0.00 3.01
151 152 2.350522 CTGGCGCTGTATTCTGACTTT 58.649 47.619 7.64 0.00 0.00 2.66
152 153 2.744202 CTGGCGCTGTATTCTGACTTTT 59.256 45.455 7.64 0.00 0.00 2.27
153 154 3.932710 CTGGCGCTGTATTCTGACTTTTA 59.067 43.478 7.64 0.00 0.00 1.52
154 155 3.932710 TGGCGCTGTATTCTGACTTTTAG 59.067 43.478 7.64 0.00 0.00 1.85
155 156 3.242446 GGCGCTGTATTCTGACTTTTAGC 60.242 47.826 7.64 0.00 0.00 3.09
156 157 4.170125 CGCTGTATTCTGACTTTTAGCG 57.830 45.455 0.00 0.00 45.08 4.26
157 158 3.542291 CGCTGTATTCTGACTTTTAGCGC 60.542 47.826 0.00 0.00 44.65 5.92
158 159 3.542291 GCTGTATTCTGACTTTTAGCGCG 60.542 47.826 0.00 0.00 0.00 6.86
159 160 2.347452 TGTATTCTGACTTTTAGCGCGC 59.653 45.455 26.66 26.66 0.00 6.86
160 161 0.727398 ATTCTGACTTTTAGCGCGCC 59.273 50.000 30.33 11.28 0.00 6.53
161 162 1.623081 TTCTGACTTTTAGCGCGCCG 61.623 55.000 30.33 13.74 0.00 6.46
182 183 4.389576 GTTGCGCGGCTGTTGGAG 62.390 66.667 8.83 0.00 0.00 3.86
183 184 4.617520 TTGCGCGGCTGTTGGAGA 62.618 61.111 8.83 0.00 0.00 3.71
184 185 3.899981 TTGCGCGGCTGTTGGAGAT 62.900 57.895 8.83 0.00 0.00 2.75
185 186 3.869272 GCGCGGCTGTTGGAGATG 61.869 66.667 8.83 0.00 0.00 2.90
186 187 3.869272 CGCGGCTGTTGGAGATGC 61.869 66.667 0.00 0.00 0.00 3.91
187 188 2.437359 GCGGCTGTTGGAGATGCT 60.437 61.111 0.00 0.00 0.00 3.79
220 221 1.107945 TTGATATGGCGGTGAGTCGA 58.892 50.000 0.00 0.00 0.00 4.20
233 234 4.613167 CGGTGAGTCGAATAGTAGTATGCC 60.613 50.000 0.00 0.00 0.00 4.40
443 444 5.163794 CGGTATGAAAATAGGTGAAGCGTTT 60.164 40.000 0.00 0.00 0.00 3.60
529 530 5.046950 TGGGTGTGCATATTTCCCTAAAAAC 60.047 40.000 8.76 0.00 38.95 2.43
694 857 2.609459 CCGAACAGATCACAATGGCTAC 59.391 50.000 0.00 0.00 0.00 3.58
721 884 5.530915 TCTGGTTGTTGTTAACTTGATCTGG 59.469 40.000 7.22 0.00 0.00 3.86
736 899 2.806945 TCTGGGCTCAACAAATAGGG 57.193 50.000 0.00 0.00 0.00 3.53
770 933 9.654663 ACAATAGAAATCTTACAACTACCAGAC 57.345 33.333 0.00 0.00 0.00 3.51
1011 1468 2.372040 TACATACCATGGCGACGGGC 62.372 60.000 13.04 0.00 42.51 6.13
1209 1666 0.669077 AGCCGATGGACGTGATACTC 59.331 55.000 0.00 0.00 40.78 2.59
1608 2071 3.311110 TTCCAGAAGGGCGCGAGT 61.311 61.111 12.10 0.00 36.21 4.18
1632 2095 3.873812 GGGATCCCGCGGTCCAAT 61.874 66.667 29.72 16.22 36.19 3.16
2025 2489 0.905357 CCAACCCAGAGTACCTCAGG 59.095 60.000 0.00 0.00 36.98 3.86
2309 2785 0.590195 GATGATGCCGTTGATGCCTC 59.410 55.000 0.00 0.00 0.00 4.70
2317 2793 1.787847 GTTGATGCCTCGAACCGTG 59.212 57.895 0.00 0.00 0.00 4.94
2463 2942 1.677552 GGAGCTTGTCCGGGAGAAA 59.322 57.895 8.09 0.25 34.84 2.52
2597 3653 7.735326 ATACATATACTCCCTCCGCTTTTAT 57.265 36.000 0.00 0.00 0.00 1.40
2612 3668 8.014322 TCCGCTTTTATTTACTCGCATATTAG 57.986 34.615 0.00 0.00 0.00 1.73
2616 3672 9.946165 GCTTTTATTTACTCGCATATTAGGTTT 57.054 29.630 0.00 0.00 0.00 3.27
2646 3702 8.527810 TGAAGTCAAACCTTGTAAAGTTTGATT 58.472 29.630 18.91 14.28 45.82 2.57
2795 3851 9.482627 TTTGTCAATGTTTACAAAGTTTGACTT 57.517 25.926 22.23 5.68 39.88 3.01
2797 3853 9.134734 TGTCAATGTTTACAAAGTTTGACTTTC 57.865 29.630 22.23 8.61 44.47 2.62
2798 3854 9.134734 GTCAATGTTTACAAAGTTTGACTTTCA 57.865 29.630 22.23 13.21 44.47 2.69
2799 3855 9.134734 TCAATGTTTACAAAGTTTGACTTTCAC 57.865 29.630 22.23 9.58 44.47 3.18
2800 3856 8.379902 CAATGTTTACAAAGTTTGACTTTCACC 58.620 33.333 22.23 2.61 44.47 4.02
2801 3857 6.982852 TGTTTACAAAGTTTGACTTTCACCA 58.017 32.000 22.23 4.91 44.47 4.17
2802 3858 7.434492 TGTTTACAAAGTTTGACTTTCACCAA 58.566 30.769 22.23 0.00 44.47 3.67
2803 3859 7.926555 TGTTTACAAAGTTTGACTTTCACCAAA 59.073 29.630 22.23 5.24 44.47 3.28
2804 3860 8.766151 GTTTACAAAGTTTGACTTTCACCAAAA 58.234 29.630 22.23 4.25 44.47 2.44
2805 3861 6.779115 ACAAAGTTTGACTTTCACCAAAAC 57.221 33.333 22.23 0.00 44.47 2.43
2806 3862 6.521162 ACAAAGTTTGACTTTCACCAAAACT 58.479 32.000 22.23 0.00 44.47 2.66
2807 3863 7.662897 ACAAAGTTTGACTTTCACCAAAACTA 58.337 30.769 22.23 0.00 44.47 2.24
2808 3864 8.145122 ACAAAGTTTGACTTTCACCAAAACTAA 58.855 29.630 22.23 0.00 44.47 2.24
2809 3865 9.150348 CAAAGTTTGACTTTCACCAAAACTAAT 57.850 29.630 10.19 0.00 44.47 1.73
2811 3867 9.797556 AAGTTTGACTTTCACCAAAACTAATAC 57.202 29.630 0.00 0.00 34.11 1.89
2812 3868 8.962679 AGTTTGACTTTCACCAAAACTAATACA 58.037 29.630 0.00 0.00 34.52 2.29
2813 3869 9.016623 GTTTGACTTTCACCAAAACTAATACAC 57.983 33.333 0.00 0.00 34.52 2.90
2814 3870 6.950545 TGACTTTCACCAAAACTAATACACG 58.049 36.000 0.00 0.00 0.00 4.49
2815 3871 6.017770 TGACTTTCACCAAAACTAATACACGG 60.018 38.462 0.00 0.00 0.00 4.94
2816 3872 6.056884 ACTTTCACCAAAACTAATACACGGA 58.943 36.000 0.00 0.00 0.00 4.69
2817 3873 6.713450 ACTTTCACCAAAACTAATACACGGAT 59.287 34.615 0.00 0.00 0.00 4.18
2818 3874 7.229907 ACTTTCACCAAAACTAATACACGGATT 59.770 33.333 0.00 0.00 0.00 3.01
2819 3875 8.618702 TTTCACCAAAACTAATACACGGATTA 57.381 30.769 0.00 0.00 0.00 1.75
2820 3876 7.599630 TCACCAAAACTAATACACGGATTAC 57.400 36.000 0.00 0.00 0.00 1.89
2821 3877 7.160049 TCACCAAAACTAATACACGGATTACA 58.840 34.615 0.00 0.00 0.00 2.41
2822 3878 7.825270 TCACCAAAACTAATACACGGATTACAT 59.175 33.333 0.00 0.00 0.00 2.29
2823 3879 9.100554 CACCAAAACTAATACACGGATTACATA 57.899 33.333 0.00 0.00 0.00 2.29
2824 3880 9.669887 ACCAAAACTAATACACGGATTACATAA 57.330 29.630 0.00 0.00 0.00 1.90
2830 3886 8.819974 ACTAATACACGGATTACATAAAAACGG 58.180 33.333 0.00 0.00 0.00 4.44
2831 3887 7.846644 AATACACGGATTACATAAAAACGGA 57.153 32.000 0.00 0.00 0.00 4.69
2832 3888 5.789710 ACACGGATTACATAAAAACGGAG 57.210 39.130 0.00 0.00 0.00 4.63
2833 3889 4.632688 ACACGGATTACATAAAAACGGAGG 59.367 41.667 0.00 0.00 0.00 4.30
2834 3890 4.034742 CACGGATTACATAAAAACGGAGGG 59.965 45.833 0.00 0.00 0.00 4.30
2835 3891 4.080975 ACGGATTACATAAAAACGGAGGGA 60.081 41.667 0.00 0.00 0.00 4.20
2836 3892 4.510340 CGGATTACATAAAAACGGAGGGAG 59.490 45.833 0.00 0.00 0.00 4.30
2837 3893 5.434408 GGATTACATAAAAACGGAGGGAGT 58.566 41.667 0.00 0.00 0.00 3.85
2838 3894 6.585416 GGATTACATAAAAACGGAGGGAGTA 58.415 40.000 0.00 0.00 0.00 2.59
2839 3895 7.222161 GGATTACATAAAAACGGAGGGAGTAT 58.778 38.462 0.00 0.00 0.00 2.12
2840 3896 8.370182 GGATTACATAAAAACGGAGGGAGTATA 58.630 37.037 0.00 0.00 0.00 1.47
2841 3897 9.768662 GATTACATAAAAACGGAGGGAGTATAA 57.231 33.333 0.00 0.00 0.00 0.98
2843 3899 9.956640 TTACATAAAAACGGAGGGAGTATAAAA 57.043 29.630 0.00 0.00 0.00 1.52
2844 3900 8.272545 ACATAAAAACGGAGGGAGTATAAAAC 57.727 34.615 0.00 0.00 0.00 2.43
2845 3901 7.884354 ACATAAAAACGGAGGGAGTATAAAACA 59.116 33.333 0.00 0.00 0.00 2.83
2846 3902 8.732531 CATAAAAACGGAGGGAGTATAAAACAA 58.267 33.333 0.00 0.00 0.00 2.83
2847 3903 6.812879 AAAACGGAGGGAGTATAAAACAAG 57.187 37.500 0.00 0.00 0.00 3.16
2848 3904 5.750352 AACGGAGGGAGTATAAAACAAGA 57.250 39.130 0.00 0.00 0.00 3.02
2849 3905 5.750352 ACGGAGGGAGTATAAAACAAGAA 57.250 39.130 0.00 0.00 0.00 2.52
2850 3906 5.731591 ACGGAGGGAGTATAAAACAAGAAG 58.268 41.667 0.00 0.00 0.00 2.85
2851 3907 5.482878 ACGGAGGGAGTATAAAACAAGAAGA 59.517 40.000 0.00 0.00 0.00 2.87
2852 3908 6.013984 ACGGAGGGAGTATAAAACAAGAAGAA 60.014 38.462 0.00 0.00 0.00 2.52
2853 3909 6.313164 CGGAGGGAGTATAAAACAAGAAGAAC 59.687 42.308 0.00 0.00 0.00 3.01
2854 3910 6.598457 GGAGGGAGTATAAAACAAGAAGAACC 59.402 42.308 0.00 0.00 0.00 3.62
2855 3911 6.482524 AGGGAGTATAAAACAAGAAGAACCC 58.517 40.000 0.00 0.00 0.00 4.11
2856 3912 6.045106 AGGGAGTATAAAACAAGAAGAACCCA 59.955 38.462 0.00 0.00 34.25 4.51
2857 3913 6.717997 GGGAGTATAAAACAAGAAGAACCCAA 59.282 38.462 0.00 0.00 0.00 4.12
2858 3914 7.396339 GGGAGTATAAAACAAGAAGAACCCAAT 59.604 37.037 0.00 0.00 0.00 3.16
2859 3915 8.803235 GGAGTATAAAACAAGAAGAACCCAATT 58.197 33.333 0.00 0.00 0.00 2.32
2860 3916 9.841880 GAGTATAAAACAAGAAGAACCCAATTC 57.158 33.333 0.00 0.00 37.62 2.17
2861 3917 8.803235 AGTATAAAACAAGAAGAACCCAATTCC 58.197 33.333 0.00 0.00 38.16 3.01
2862 3918 5.948742 AAAACAAGAAGAACCCAATTCCA 57.051 34.783 0.00 0.00 38.16 3.53
2863 3919 6.499106 AAAACAAGAAGAACCCAATTCCAT 57.501 33.333 0.00 0.00 38.16 3.41
2864 3920 5.473066 AACAAGAAGAACCCAATTCCATG 57.527 39.130 0.00 0.00 38.16 3.66
2865 3921 4.739793 ACAAGAAGAACCCAATTCCATGA 58.260 39.130 0.00 0.00 38.16 3.07
2866 3922 5.147032 ACAAGAAGAACCCAATTCCATGAA 58.853 37.500 0.00 0.00 38.16 2.57
2867 3923 5.244626 ACAAGAAGAACCCAATTCCATGAAG 59.755 40.000 0.00 0.00 38.16 3.02
2868 3924 5.261040 AGAAGAACCCAATTCCATGAAGA 57.739 39.130 0.00 0.00 38.16 2.87
2869 3925 5.835582 AGAAGAACCCAATTCCATGAAGAT 58.164 37.500 0.00 0.00 38.16 2.40
2870 3926 6.259123 AGAAGAACCCAATTCCATGAAGATT 58.741 36.000 0.00 0.00 38.16 2.40
2871 3927 5.927281 AGAACCCAATTCCATGAAGATTG 57.073 39.130 0.00 1.65 38.16 2.67
2872 3928 5.336102 AGAACCCAATTCCATGAAGATTGT 58.664 37.500 0.00 0.00 38.16 2.71
2873 3929 5.420104 AGAACCCAATTCCATGAAGATTGTC 59.580 40.000 0.00 0.00 38.16 3.18
2874 3930 4.676109 ACCCAATTCCATGAAGATTGTCA 58.324 39.130 0.00 0.00 0.00 3.58
2875 3931 4.463891 ACCCAATTCCATGAAGATTGTCAC 59.536 41.667 0.00 0.00 0.00 3.67
2876 3932 4.463539 CCCAATTCCATGAAGATTGTCACA 59.536 41.667 0.00 0.00 0.00 3.58
2877 3933 5.404946 CCAATTCCATGAAGATTGTCACAC 58.595 41.667 0.00 0.00 0.00 3.82
2878 3934 5.047872 CCAATTCCATGAAGATTGTCACACA 60.048 40.000 0.00 0.00 0.00 3.72
2879 3935 6.448852 CAATTCCATGAAGATTGTCACACAA 58.551 36.000 0.00 0.00 42.95 3.33
2899 3955 6.657541 ACACAATATCCGGTGTAAATCTTTGT 59.342 34.615 0.00 1.08 45.77 2.83
2962 4021 9.109393 TCTCCTTTCTATTTATTCAATTCCACG 57.891 33.333 0.00 0.00 0.00 4.94
2985 4044 7.994894 CACGAAAAGTACGTTTTACTAACTCTG 59.005 37.037 8.21 0.00 42.07 3.35
2987 4046 8.203996 CGAAAAGTACGTTTTACTAACTCTGAC 58.796 37.037 8.21 0.00 38.54 3.51
3007 4066 5.820131 TGACAAATGTGACTTTAGTTGCTG 58.180 37.500 0.00 0.00 0.00 4.41
3008 4067 5.588246 TGACAAATGTGACTTTAGTTGCTGA 59.412 36.000 0.00 0.00 0.00 4.26
3019 4078 7.119262 TGACTTTAGTTGCTGAAGTAAATAGGC 59.881 37.037 6.34 0.00 39.75 3.93
3021 4080 6.985188 TTAGTTGCTGAAGTAAATAGGCAG 57.015 37.500 0.00 0.00 0.00 4.85
3024 4083 5.770162 AGTTGCTGAAGTAAATAGGCAGTTT 59.230 36.000 0.00 0.00 0.00 2.66
3066 4125 7.143340 AGAAAATAATCACGATCATGGCATTG 58.857 34.615 0.00 0.00 0.00 2.82
3086 4145 7.485913 GGCATTGACAAAATTACTGACATACTG 59.514 37.037 0.00 0.00 0.00 2.74
3092 4151 9.901724 GACAAAATTACTGACATACTGATTACG 57.098 33.333 0.00 0.00 0.00 3.18
3121 4180 7.183433 CAGACTAGCATGTACTACGCATATAG 58.817 42.308 0.00 0.00 0.00 1.31
3149 4208 6.387041 AACATCTACGCACATAGCTAGTAA 57.613 37.500 0.00 0.00 42.61 2.24
3152 4211 4.795268 TCTACGCACATAGCTAGTAATGC 58.205 43.478 0.00 5.50 42.61 3.56
3159 4218 6.216569 GCACATAGCTAGTAATGCTAAGACA 58.783 40.000 11.87 0.00 44.73 3.41
3160 4219 6.701841 GCACATAGCTAGTAATGCTAAGACAA 59.298 38.462 11.87 0.00 44.73 3.18
3176 4235 7.936847 TGCTAAGACAAAAATTAACAGGAGAGA 59.063 33.333 0.00 0.00 0.00 3.10
3193 4252 8.643324 ACAGGAGAGAGATAAACATGTTATACC 58.357 37.037 12.39 5.85 0.00 2.73
3194 4253 8.091449 CAGGAGAGAGATAAACATGTTATACCC 58.909 40.741 12.39 2.03 0.00 3.69
3195 4254 8.013667 AGGAGAGAGATAAACATGTTATACCCT 58.986 37.037 12.39 6.94 0.00 4.34
3196 4255 8.308207 GGAGAGAGATAAACATGTTATACCCTC 58.692 40.741 12.39 14.86 0.00 4.30
3197 4256 8.196378 AGAGAGATAAACATGTTATACCCTCC 57.804 38.462 12.39 8.43 0.00 4.30
3198 4257 6.994221 AGAGATAAACATGTTATACCCTCCG 58.006 40.000 12.39 0.00 0.00 4.63
3199 4258 6.781014 AGAGATAAACATGTTATACCCTCCGA 59.219 38.462 12.39 0.00 0.00 4.55
3200 4259 7.455008 AGAGATAAACATGTTATACCCTCCGAT 59.545 37.037 12.39 0.00 0.00 4.18
3201 4260 7.612677 AGATAAACATGTTATACCCTCCGATC 58.387 38.462 12.39 3.02 0.00 3.69
3202 4261 3.936372 ACATGTTATACCCTCCGATCG 57.064 47.619 8.51 8.51 0.00 3.69
3203 4262 2.561419 ACATGTTATACCCTCCGATCGG 59.439 50.000 28.62 28.62 0.00 4.18
3204 4263 0.963962 TGTTATACCCTCCGATCGGC 59.036 55.000 29.62 12.22 34.68 5.54
3205 4264 0.245813 GTTATACCCTCCGATCGGCC 59.754 60.000 29.62 0.00 34.68 6.13
3206 4265 0.178955 TTATACCCTCCGATCGGCCA 60.179 55.000 29.62 12.52 34.68 5.36
3207 4266 0.611062 TATACCCTCCGATCGGCCAG 60.611 60.000 29.62 21.31 34.68 4.85
3208 4267 3.960702 TATACCCTCCGATCGGCCAGG 62.961 61.905 29.62 28.33 34.68 4.45
3244 4303 4.041917 CGGCGGCAACAGCAACAT 62.042 61.111 10.53 0.00 37.75 2.71
3245 4304 2.126346 GGCGGCAACAGCAACATC 60.126 61.111 3.07 0.00 37.75 3.06
3246 4305 2.126346 GCGGCAACAGCAACATCC 60.126 61.111 0.00 0.00 36.37 3.51
3247 4306 2.629656 GCGGCAACAGCAACATCCT 61.630 57.895 0.00 0.00 36.37 3.24
3248 4307 1.959085 CGGCAACAGCAACATCCTT 59.041 52.632 0.00 0.00 0.00 3.36
3249 4308 0.387622 CGGCAACAGCAACATCCTTG 60.388 55.000 0.00 0.00 0.00 3.61
3250 4309 0.037975 GGCAACAGCAACATCCTTGG 60.038 55.000 0.00 0.00 0.00 3.61
3251 4310 0.675633 GCAACAGCAACATCCTTGGT 59.324 50.000 0.00 0.00 0.00 3.67
3254 4313 1.588082 CAGCAACATCCTTGGTGGC 59.412 57.895 4.67 0.00 41.12 5.01
3255 4314 1.607467 AGCAACATCCTTGGTGGCC 60.607 57.895 0.00 0.00 41.12 5.36
3256 4315 1.607467 GCAACATCCTTGGTGGCCT 60.607 57.895 3.32 0.00 41.12 5.19
3257 4316 1.187567 GCAACATCCTTGGTGGCCTT 61.188 55.000 3.32 0.00 41.12 4.35
3258 4317 0.890683 CAACATCCTTGGTGGCCTTC 59.109 55.000 3.32 0.00 36.88 3.46
3259 4318 0.779997 AACATCCTTGGTGGCCTTCT 59.220 50.000 3.32 0.00 35.26 2.85
3260 4319 0.779997 ACATCCTTGGTGGCCTTCTT 59.220 50.000 3.32 0.00 35.26 2.52
3261 4320 1.272147 ACATCCTTGGTGGCCTTCTTC 60.272 52.381 3.32 0.00 35.26 2.87
3262 4321 1.005215 CATCCTTGGTGGCCTTCTTCT 59.995 52.381 3.32 0.00 35.26 2.85
3263 4322 0.693049 TCCTTGGTGGCCTTCTTCTC 59.307 55.000 3.32 0.00 35.26 2.87
3264 4323 0.674895 CCTTGGTGGCCTTCTTCTCG 60.675 60.000 3.32 0.00 0.00 4.04
3265 4324 0.674895 CTTGGTGGCCTTCTTCTCGG 60.675 60.000 3.32 0.00 0.00 4.63
3266 4325 2.436824 GGTGGCCTTCTTCTCGGC 60.437 66.667 3.32 0.00 45.55 5.54
3267 4326 2.665603 GTGGCCTTCTTCTCGGCT 59.334 61.111 3.32 0.00 45.57 5.52
3268 4327 1.003233 GTGGCCTTCTTCTCGGCTT 60.003 57.895 3.32 0.00 45.57 4.35
3269 4328 0.606673 GTGGCCTTCTTCTCGGCTTT 60.607 55.000 3.32 0.00 45.57 3.51
3270 4329 0.606401 TGGCCTTCTTCTCGGCTTTG 60.606 55.000 3.32 0.00 45.57 2.77
3271 4330 0.606673 GGCCTTCTTCTCGGCTTTGT 60.607 55.000 0.00 0.00 45.57 2.83
3272 4331 1.239347 GCCTTCTTCTCGGCTTTGTT 58.761 50.000 0.00 0.00 42.98 2.83
3273 4332 1.068954 GCCTTCTTCTCGGCTTTGTTG 60.069 52.381 0.00 0.00 42.98 3.33
3274 4333 1.537202 CCTTCTTCTCGGCTTTGTTGG 59.463 52.381 0.00 0.00 0.00 3.77
3275 4334 0.951558 TTCTTCTCGGCTTTGTTGGC 59.048 50.000 0.00 0.00 0.00 4.52
3276 4335 0.179032 TCTTCTCGGCTTTGTTGGCA 60.179 50.000 0.00 0.00 0.00 4.92
3277 4336 0.239347 CTTCTCGGCTTTGTTGGCAG 59.761 55.000 0.00 0.00 0.00 4.85
3278 4337 0.465460 TTCTCGGCTTTGTTGGCAGT 60.465 50.000 0.00 0.00 0.00 4.40
3279 4338 1.165907 TCTCGGCTTTGTTGGCAGTG 61.166 55.000 0.00 0.00 0.00 3.66
3280 4339 2.133742 CTCGGCTTTGTTGGCAGTGG 62.134 60.000 0.00 0.00 0.00 4.00
3281 4340 2.192861 CGGCTTTGTTGGCAGTGGA 61.193 57.895 0.00 0.00 0.00 4.02
3282 4341 1.363807 GGCTTTGTTGGCAGTGGAC 59.636 57.895 0.00 0.00 0.00 4.02
3283 4342 1.391157 GGCTTTGTTGGCAGTGGACA 61.391 55.000 0.00 0.00 0.00 4.02
3284 4343 0.675633 GCTTTGTTGGCAGTGGACAT 59.324 50.000 0.00 0.00 0.00 3.06
3285 4344 1.603678 GCTTTGTTGGCAGTGGACATG 60.604 52.381 0.00 0.00 0.00 3.21
3286 4345 1.000060 CTTTGTTGGCAGTGGACATGG 60.000 52.381 0.00 0.00 0.00 3.66
3287 4346 0.106268 TTGTTGGCAGTGGACATGGT 60.106 50.000 0.00 0.00 0.00 3.55
3288 4347 0.822944 TGTTGGCAGTGGACATGGTG 60.823 55.000 0.00 0.00 0.00 4.17
3289 4348 0.537143 GTTGGCAGTGGACATGGTGA 60.537 55.000 0.00 0.00 0.00 4.02
3290 4349 0.537143 TTGGCAGTGGACATGGTGAC 60.537 55.000 0.00 0.00 0.00 3.67
3291 4350 2.034879 GGCAGTGGACATGGTGACG 61.035 63.158 0.00 0.00 0.00 4.35
3292 4351 1.005037 GCAGTGGACATGGTGACGA 60.005 57.895 0.00 0.00 0.00 4.20
3293 4352 0.391661 GCAGTGGACATGGTGACGAT 60.392 55.000 0.00 0.00 0.00 3.73
3294 4353 1.362768 CAGTGGACATGGTGACGATG 58.637 55.000 6.02 6.02 0.00 3.84
3295 4354 1.066929 CAGTGGACATGGTGACGATGA 60.067 52.381 14.55 0.00 0.00 2.92
3296 4355 1.623311 AGTGGACATGGTGACGATGAA 59.377 47.619 14.55 0.00 0.00 2.57
3297 4356 2.002586 GTGGACATGGTGACGATGAAG 58.997 52.381 14.55 0.00 0.00 3.02
3298 4357 1.899142 TGGACATGGTGACGATGAAGA 59.101 47.619 14.55 0.00 0.00 2.87
3299 4358 2.271800 GGACATGGTGACGATGAAGAC 58.728 52.381 14.55 3.19 0.00 3.01
3300 4359 1.920574 GACATGGTGACGATGAAGACG 59.079 52.381 14.55 0.00 0.00 4.18
3301 4360 1.544246 ACATGGTGACGATGAAGACGA 59.456 47.619 14.55 0.00 34.70 4.20
3302 4361 1.920574 CATGGTGACGATGAAGACGAC 59.079 52.381 0.94 0.00 34.70 4.34
3303 4362 0.109919 TGGTGACGATGAAGACGACG 60.110 55.000 0.00 0.00 34.70 5.12
3304 4363 1.403972 GGTGACGATGAAGACGACGC 61.404 60.000 0.00 0.00 35.91 5.19
3305 4364 1.511254 TGACGATGAAGACGACGCG 60.511 57.895 3.53 3.53 34.70 6.01
3306 4365 2.202440 ACGATGAAGACGACGCGG 60.202 61.111 12.47 0.00 34.70 6.46
3307 4366 2.099638 CGATGAAGACGACGCGGA 59.900 61.111 12.47 0.00 0.00 5.54
3308 4367 2.215604 CGATGAAGACGACGCGGAC 61.216 63.158 12.47 2.84 0.00 4.79
3309 4368 1.154093 GATGAAGACGACGCGGACA 60.154 57.895 12.47 0.00 0.00 4.02
3310 4369 0.525668 GATGAAGACGACGCGGACAT 60.526 55.000 12.47 4.90 0.00 3.06
3311 4370 0.802222 ATGAAGACGACGCGGACATG 60.802 55.000 12.47 0.00 0.00 3.21
3312 4371 2.126071 AAGACGACGCGGACATGG 60.126 61.111 12.47 0.00 0.00 3.66
3313 4372 2.537792 GAAGACGACGCGGACATGGA 62.538 60.000 12.47 0.00 0.00 3.41
3314 4373 2.814183 AAGACGACGCGGACATGGAC 62.814 60.000 12.47 0.00 0.00 4.02
3315 4374 4.771356 ACGACGCGGACATGGACG 62.771 66.667 12.47 6.90 0.00 4.79
3316 4375 4.470170 CGACGCGGACATGGACGA 62.470 66.667 12.47 0.00 0.00 4.20
3317 4376 2.126228 GACGCGGACATGGACGAA 60.126 61.111 12.47 0.00 0.00 3.85
3318 4377 1.518572 GACGCGGACATGGACGAAT 60.519 57.895 12.47 2.20 0.00 3.34
3319 4378 1.752501 GACGCGGACATGGACGAATG 61.753 60.000 12.47 6.36 0.00 2.67
3320 4379 1.518352 CGCGGACATGGACGAATGA 60.518 57.895 14.33 0.00 0.00 2.57
3321 4380 0.875908 CGCGGACATGGACGAATGAT 60.876 55.000 14.33 0.00 0.00 2.45
3322 4381 0.583438 GCGGACATGGACGAATGATG 59.417 55.000 14.33 0.00 0.00 3.07
3323 4382 1.220529 CGGACATGGACGAATGATGG 58.779 55.000 5.49 0.00 0.00 3.51
3324 4383 1.473257 CGGACATGGACGAATGATGGT 60.473 52.381 5.49 0.00 0.00 3.55
3325 4384 1.942657 GGACATGGACGAATGATGGTG 59.057 52.381 0.00 0.00 0.00 4.17
3326 4385 2.419990 GGACATGGACGAATGATGGTGA 60.420 50.000 0.00 0.00 0.00 4.02
3327 4386 3.270027 GACATGGACGAATGATGGTGAA 58.730 45.455 0.00 0.00 0.00 3.18
3328 4387 3.009723 ACATGGACGAATGATGGTGAAC 58.990 45.455 0.00 0.00 0.00 3.18
3329 4388 2.849294 TGGACGAATGATGGTGAACA 57.151 45.000 0.00 0.00 0.00 3.18
3330 4389 2.698803 TGGACGAATGATGGTGAACAG 58.301 47.619 0.00 0.00 0.00 3.16
3331 4390 2.038426 TGGACGAATGATGGTGAACAGT 59.962 45.455 0.00 0.00 0.00 3.55
3332 4391 2.673368 GGACGAATGATGGTGAACAGTC 59.327 50.000 0.00 0.00 0.00 3.51
3334 4393 2.337583 CGAATGATGGTGAACAGTCGT 58.662 47.619 0.00 0.00 45.12 4.34
3335 4394 2.092681 CGAATGATGGTGAACAGTCGTG 59.907 50.000 0.00 0.00 45.12 4.35
3336 4395 2.839486 ATGATGGTGAACAGTCGTGT 57.161 45.000 0.00 0.00 39.19 4.49
3337 4396 3.953712 ATGATGGTGAACAGTCGTGTA 57.046 42.857 0.00 0.00 35.08 2.90
3338 4397 3.297830 TGATGGTGAACAGTCGTGTAG 57.702 47.619 0.00 0.00 35.08 2.74
3339 4398 2.029380 TGATGGTGAACAGTCGTGTAGG 60.029 50.000 0.00 0.00 35.08 3.18
3340 4399 1.694844 TGGTGAACAGTCGTGTAGGA 58.305 50.000 0.00 0.00 35.08 2.94
3341 4400 1.611977 TGGTGAACAGTCGTGTAGGAG 59.388 52.381 0.00 0.00 35.08 3.69
3342 4401 1.884579 GGTGAACAGTCGTGTAGGAGA 59.115 52.381 0.00 0.00 35.08 3.71
3343 4402 2.351544 GGTGAACAGTCGTGTAGGAGAC 60.352 54.545 0.00 0.00 35.08 3.36
3344 4403 2.292569 GTGAACAGTCGTGTAGGAGACA 59.707 50.000 0.00 0.00 39.67 3.41
3374 4433 5.453567 AAAAACTAATTGCCACTGACCTC 57.546 39.130 0.00 0.00 0.00 3.85
3375 4434 2.386661 ACTAATTGCCACTGACCTCG 57.613 50.000 0.00 0.00 0.00 4.63
3376 4435 1.066143 ACTAATTGCCACTGACCTCGG 60.066 52.381 0.00 0.00 0.00 4.63
3377 4436 0.392461 TAATTGCCACTGACCTCGGC 60.392 55.000 0.00 0.00 46.43 5.54
3378 4437 2.129555 AATTGCCACTGACCTCGGCT 62.130 55.000 0.00 0.00 46.39 5.52
3379 4438 2.527951 ATTGCCACTGACCTCGGCTC 62.528 60.000 0.00 0.00 46.39 4.70
3380 4439 4.803426 GCCACTGACCTCGGCTCG 62.803 72.222 0.00 0.00 42.78 5.03
3381 4440 4.135153 CCACTGACCTCGGCTCGG 62.135 72.222 0.00 0.00 0.00 4.63
3382 4441 4.803426 CACTGACCTCGGCTCGGC 62.803 72.222 0.00 0.00 0.00 5.54
3384 4443 4.200283 CTGACCTCGGCTCGGCTC 62.200 72.222 0.00 0.00 0.00 4.70
3386 4445 3.532155 GACCTCGGCTCGGCTCAT 61.532 66.667 0.00 0.00 0.00 2.90
3387 4446 3.077556 ACCTCGGCTCGGCTCATT 61.078 61.111 0.00 0.00 0.00 2.57
3388 4447 2.279784 CCTCGGCTCGGCTCATTC 60.280 66.667 0.00 0.00 0.00 2.67
3389 4448 2.790791 CCTCGGCTCGGCTCATTCT 61.791 63.158 0.00 0.00 0.00 2.40
3390 4449 1.299773 CTCGGCTCGGCTCATTCTC 60.300 63.158 0.00 0.00 0.00 2.87
3391 4450 2.656651 CGGCTCGGCTCATTCTCG 60.657 66.667 0.00 0.00 0.00 4.04
3392 4451 2.964389 GGCTCGGCTCATTCTCGC 60.964 66.667 0.00 0.00 0.00 5.03
3393 4452 2.202797 GCTCGGCTCATTCTCGCA 60.203 61.111 0.00 0.00 0.00 5.10
3394 4453 1.811266 GCTCGGCTCATTCTCGCAA 60.811 57.895 0.00 0.00 0.00 4.85
3395 4454 2.002127 CTCGGCTCATTCTCGCAAC 58.998 57.895 0.00 0.00 0.00 4.17
3396 4455 0.459237 CTCGGCTCATTCTCGCAACT 60.459 55.000 0.00 0.00 0.00 3.16
3397 4456 0.458543 TCGGCTCATTCTCGCAACTC 60.459 55.000 0.00 0.00 0.00 3.01
3398 4457 0.737367 CGGCTCATTCTCGCAACTCA 60.737 55.000 0.00 0.00 0.00 3.41
3399 4458 1.442769 GGCTCATTCTCGCAACTCAA 58.557 50.000 0.00 0.00 0.00 3.02
3400 4459 1.396301 GGCTCATTCTCGCAACTCAAG 59.604 52.381 0.00 0.00 0.00 3.02
3401 4460 1.396301 GCTCATTCTCGCAACTCAAGG 59.604 52.381 0.00 0.00 0.00 3.61
3402 4461 1.396301 CTCATTCTCGCAACTCAAGGC 59.604 52.381 0.00 0.00 0.00 4.35
3408 4467 3.793144 GCAACTCAAGGCGAGGCG 61.793 66.667 0.00 0.00 46.98 5.52
3409 4468 2.048222 CAACTCAAGGCGAGGCGA 60.048 61.111 0.00 0.00 46.98 5.54
3410 4469 2.097038 CAACTCAAGGCGAGGCGAG 61.097 63.158 0.00 0.00 46.98 5.03
3411 4470 3.302347 AACTCAAGGCGAGGCGAGG 62.302 63.158 0.00 0.00 46.98 4.63
3458 4517 4.709250 GGAACCACTTCTCTTCTCAAACT 58.291 43.478 0.00 0.00 0.00 2.66
3459 4518 4.752604 GGAACCACTTCTCTTCTCAAACTC 59.247 45.833 0.00 0.00 0.00 3.01
3460 4519 4.344359 ACCACTTCTCTTCTCAAACTCC 57.656 45.455 0.00 0.00 0.00 3.85
3461 4520 3.711704 ACCACTTCTCTTCTCAAACTCCA 59.288 43.478 0.00 0.00 0.00 3.86
3462 4521 4.164221 ACCACTTCTCTTCTCAAACTCCAA 59.836 41.667 0.00 0.00 0.00 3.53
3463 4522 5.163152 ACCACTTCTCTTCTCAAACTCCAAT 60.163 40.000 0.00 0.00 0.00 3.16
3464 4523 6.043243 ACCACTTCTCTTCTCAAACTCCAATA 59.957 38.462 0.00 0.00 0.00 1.90
3465 4524 6.593382 CCACTTCTCTTCTCAAACTCCAATAG 59.407 42.308 0.00 0.00 0.00 1.73
3466 4525 6.091986 CACTTCTCTTCTCAAACTCCAATAGC 59.908 42.308 0.00 0.00 0.00 2.97
3467 4526 5.745312 TCTCTTCTCAAACTCCAATAGCA 57.255 39.130 0.00 0.00 0.00 3.49
3468 4527 6.305272 TCTCTTCTCAAACTCCAATAGCAT 57.695 37.500 0.00 0.00 0.00 3.79
3469 4528 6.111382 TCTCTTCTCAAACTCCAATAGCATG 58.889 40.000 0.00 0.00 0.00 4.06
3470 4529 5.809001 TCTTCTCAAACTCCAATAGCATGT 58.191 37.500 0.00 0.00 0.00 3.21
3471 4530 5.645067 TCTTCTCAAACTCCAATAGCATGTG 59.355 40.000 0.00 0.00 0.00 3.21
3472 4531 4.264253 TCTCAAACTCCAATAGCATGTGG 58.736 43.478 0.00 0.00 36.13 4.17
3473 4532 4.019411 TCTCAAACTCCAATAGCATGTGGA 60.019 41.667 3.02 3.02 41.72 4.02
3474 4533 4.661222 TCAAACTCCAATAGCATGTGGAA 58.339 39.130 4.50 0.00 43.32 3.53
3475 4534 4.701651 TCAAACTCCAATAGCATGTGGAAG 59.298 41.667 4.50 2.43 43.32 3.46
3476 4535 4.574674 AACTCCAATAGCATGTGGAAGA 57.425 40.909 4.50 0.00 43.32 2.87
3477 4536 4.148128 ACTCCAATAGCATGTGGAAGAG 57.852 45.455 4.50 2.63 43.32 2.85
3478 4537 3.776969 ACTCCAATAGCATGTGGAAGAGA 59.223 43.478 4.50 0.00 43.32 3.10
3479 4538 4.225942 ACTCCAATAGCATGTGGAAGAGAA 59.774 41.667 4.50 0.00 43.32 2.87
3480 4539 5.104193 ACTCCAATAGCATGTGGAAGAGAAT 60.104 40.000 4.50 0.00 43.32 2.40
3481 4540 5.371526 TCCAATAGCATGTGGAAGAGAATC 58.628 41.667 0.41 0.00 41.02 2.52
3482 4541 4.518211 CCAATAGCATGTGGAAGAGAATCC 59.482 45.833 0.00 0.00 37.03 3.01
3483 4542 2.725221 AGCATGTGGAAGAGAATCCC 57.275 50.000 0.00 0.00 38.82 3.85
3484 4543 2.203584 AGCATGTGGAAGAGAATCCCT 58.796 47.619 0.00 0.00 38.82 4.20
3485 4544 2.579860 AGCATGTGGAAGAGAATCCCTT 59.420 45.455 0.00 0.00 38.82 3.95
3486 4545 3.782523 AGCATGTGGAAGAGAATCCCTTA 59.217 43.478 0.00 0.00 38.82 2.69
3487 4546 4.414846 AGCATGTGGAAGAGAATCCCTTAT 59.585 41.667 0.00 0.00 38.82 1.73
3488 4547 5.608437 AGCATGTGGAAGAGAATCCCTTATA 59.392 40.000 0.00 0.00 38.82 0.98
3489 4548 6.101734 AGCATGTGGAAGAGAATCCCTTATAA 59.898 38.462 0.00 0.00 38.82 0.98
3490 4549 6.429385 GCATGTGGAAGAGAATCCCTTATAAG 59.571 42.308 5.43 5.43 38.82 1.73
3491 4550 6.500589 TGTGGAAGAGAATCCCTTATAAGG 57.499 41.667 22.75 22.75 46.06 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.051074 TCCTACTATGTGAACTACGATTCGA 58.949 40.000 13.95 0.00 0.00 3.71
1 2 6.296365 TCCTACTATGTGAACTACGATTCG 57.704 41.667 4.14 4.14 0.00 3.34
2 3 8.922058 TTTTCCTACTATGTGAACTACGATTC 57.078 34.615 0.00 0.00 0.00 2.52
27 28 5.005299 GGCGCGCTATATTTCATTTGTTTTT 59.995 36.000 32.29 0.00 0.00 1.94
28 29 4.502645 GGCGCGCTATATTTCATTTGTTTT 59.497 37.500 32.29 0.00 0.00 2.43
29 30 4.041723 GGCGCGCTATATTTCATTTGTTT 58.958 39.130 32.29 0.00 0.00 2.83
30 31 3.315191 AGGCGCGCTATATTTCATTTGTT 59.685 39.130 32.29 0.00 0.00 2.83
31 32 2.878406 AGGCGCGCTATATTTCATTTGT 59.122 40.909 32.29 0.00 0.00 2.83
32 33 3.228749 CAGGCGCGCTATATTTCATTTG 58.771 45.455 32.29 2.86 0.00 2.32
33 34 2.350772 GCAGGCGCGCTATATTTCATTT 60.351 45.455 32.29 0.00 0.00 2.32
34 35 1.197721 GCAGGCGCGCTATATTTCATT 59.802 47.619 32.29 0.93 0.00 2.57
35 36 0.798776 GCAGGCGCGCTATATTTCAT 59.201 50.000 32.29 2.84 0.00 2.57
36 37 0.249868 AGCAGGCGCGCTATATTTCA 60.250 50.000 32.29 0.00 45.49 2.69
37 38 0.164647 CAGCAGGCGCGCTATATTTC 59.835 55.000 32.29 12.47 45.49 2.17
38 39 1.230635 CCAGCAGGCGCGCTATATTT 61.231 55.000 32.29 9.28 45.49 1.40
39 40 1.669115 CCAGCAGGCGCGCTATATT 60.669 57.895 32.29 10.43 45.49 1.28
40 41 2.047844 CCAGCAGGCGCGCTATAT 60.048 61.111 32.29 12.41 45.49 0.86
41 42 3.212906 CTCCAGCAGGCGCGCTATA 62.213 63.158 32.29 8.72 45.49 1.31
42 43 4.598894 CTCCAGCAGGCGCGCTAT 62.599 66.667 32.29 17.65 45.49 2.97
62 63 2.592623 AAAATAAAGCGCGCCCGAGC 62.593 55.000 30.33 8.33 41.21 5.03
63 64 0.861450 CAAAATAAAGCGCGCCCGAG 60.861 55.000 30.33 6.01 36.29 4.63
64 65 1.135731 CAAAATAAAGCGCGCCCGA 59.864 52.632 30.33 13.77 36.29 5.14
65 66 2.504653 GCAAAATAAAGCGCGCCCG 61.505 57.895 30.33 8.37 37.57 6.13
66 67 3.383861 GCAAAATAAAGCGCGCCC 58.616 55.556 30.33 0.16 0.00 6.13
72 73 2.164663 GGCCGCCGCAAAATAAAGC 61.165 57.895 0.00 0.00 36.38 3.51
73 74 1.871789 CGGCCGCCGCAAAATAAAG 60.872 57.895 20.79 0.00 41.17 1.85
74 75 2.179517 CGGCCGCCGCAAAATAAA 59.820 55.556 20.79 0.00 41.17 1.40
115 116 1.288127 CAGGTGAGCCAGCTTTTGC 59.712 57.895 4.42 0.00 40.40 3.68
116 117 1.962144 CCAGGTGAGCCAGCTTTTG 59.038 57.895 4.42 0.00 40.40 2.44
117 118 1.905354 GCCAGGTGAGCCAGCTTTT 60.905 57.895 4.42 0.00 40.40 2.27
118 119 2.282745 GCCAGGTGAGCCAGCTTT 60.283 61.111 4.42 0.00 40.40 3.51
119 120 4.711949 CGCCAGGTGAGCCAGCTT 62.712 66.667 0.00 0.00 40.40 3.74
129 130 0.108138 GTCAGAATACAGCGCCAGGT 60.108 55.000 2.29 2.41 0.00 4.00
130 131 0.176680 AGTCAGAATACAGCGCCAGG 59.823 55.000 2.29 0.00 0.00 4.45
131 132 2.015736 AAGTCAGAATACAGCGCCAG 57.984 50.000 2.29 0.00 0.00 4.85
132 133 2.472695 AAAGTCAGAATACAGCGCCA 57.527 45.000 2.29 0.00 0.00 5.69
133 134 3.242446 GCTAAAAGTCAGAATACAGCGCC 60.242 47.826 2.29 0.00 0.00 6.53
134 135 3.542291 CGCTAAAAGTCAGAATACAGCGC 60.542 47.826 0.00 0.00 43.22 5.92
135 136 4.170125 CGCTAAAAGTCAGAATACAGCG 57.830 45.455 6.36 6.36 43.66 5.18
136 137 3.542291 CGCGCTAAAAGTCAGAATACAGC 60.542 47.826 5.56 0.00 0.00 4.40
137 138 3.542291 GCGCGCTAAAAGTCAGAATACAG 60.542 47.826 26.67 0.00 0.00 2.74
138 139 2.347452 GCGCGCTAAAAGTCAGAATACA 59.653 45.455 26.67 0.00 0.00 2.29
139 140 2.285660 GGCGCGCTAAAAGTCAGAATAC 60.286 50.000 32.29 3.82 0.00 1.89
140 141 1.931172 GGCGCGCTAAAAGTCAGAATA 59.069 47.619 32.29 0.00 0.00 1.75
141 142 0.727398 GGCGCGCTAAAAGTCAGAAT 59.273 50.000 32.29 0.00 0.00 2.40
142 143 1.623081 CGGCGCGCTAAAAGTCAGAA 61.623 55.000 32.29 0.00 0.00 3.02
143 144 2.092291 CGGCGCGCTAAAAGTCAGA 61.092 57.895 32.29 0.00 0.00 3.27
144 145 2.395690 CGGCGCGCTAAAAGTCAG 59.604 61.111 32.29 7.30 0.00 3.51
165 166 4.389576 CTCCAACAGCCGCGCAAC 62.390 66.667 8.75 0.00 0.00 4.17
166 167 3.899981 ATCTCCAACAGCCGCGCAA 62.900 57.895 8.75 0.00 0.00 4.85
167 168 4.393155 ATCTCCAACAGCCGCGCA 62.393 61.111 8.75 0.00 0.00 6.09
168 169 3.869272 CATCTCCAACAGCCGCGC 61.869 66.667 0.00 0.00 0.00 6.86
169 170 3.869272 GCATCTCCAACAGCCGCG 61.869 66.667 0.00 0.00 0.00 6.46
170 171 2.437359 AGCATCTCCAACAGCCGC 60.437 61.111 0.00 0.00 0.00 6.53
171 172 3.805267 GAGCATCTCCAACAGCCG 58.195 61.111 0.00 0.00 0.00 5.52
182 183 9.241317 CATATCAATTTGGTTTGTTAGAGCATC 57.759 33.333 0.00 0.00 0.00 3.91
183 184 8.199449 CCATATCAATTTGGTTTGTTAGAGCAT 58.801 33.333 0.00 0.00 0.00 3.79
184 185 7.546358 CCATATCAATTTGGTTTGTTAGAGCA 58.454 34.615 0.00 0.00 0.00 4.26
185 186 6.476706 GCCATATCAATTTGGTTTGTTAGAGC 59.523 38.462 0.00 0.00 35.34 4.09
186 187 6.692681 CGCCATATCAATTTGGTTTGTTAGAG 59.307 38.462 0.00 0.00 35.34 2.43
187 188 6.405286 CCGCCATATCAATTTGGTTTGTTAGA 60.405 38.462 0.00 0.00 35.34 2.10
220 221 5.247110 CACCTCTGGATGGCATACTACTATT 59.753 44.000 11.73 0.00 0.00 1.73
233 234 1.813513 AGAAAACGCACCTCTGGATG 58.186 50.000 0.00 0.00 0.00 3.51
271 272 6.038161 GCATGTACACCTGCATAATTTACTGA 59.962 38.462 15.04 0.00 37.43 3.41
274 275 6.130298 TGCATGTACACCTGCATAATTTAC 57.870 37.500 17.98 0.00 41.39 2.01
489 490 0.401738 CCCATTGTCTGGTGACTGGT 59.598 55.000 0.00 0.00 44.30 4.00
512 513 8.560355 AATTTGTGGTTTTTAGGGAAATATGC 57.440 30.769 0.00 0.00 0.00 3.14
694 857 5.666969 TCAAGTTAACAACAACCAGATCG 57.333 39.130 8.61 0.00 0.00 3.69
721 884 3.646736 AGGTACCCTATTTGTTGAGCC 57.353 47.619 8.74 0.00 28.47 4.70
847 1010 8.204836 ACTGCAGTAGTTGTTATCCCTAATAAG 58.795 37.037 20.16 0.00 35.67 1.73
1011 1468 2.480555 GCGTCAAATGGTGCTCCG 59.519 61.111 0.00 0.00 36.30 4.63
1050 1507 4.452733 GACTCCCCGGCGAAGGTG 62.453 72.222 9.30 12.35 0.00 4.00
1209 1666 1.136984 GTGAGTGCGTACCTCCTCG 59.863 63.158 0.00 0.00 0.00 4.63
1725 2188 2.742372 CACAGGTACAGCGGCACC 60.742 66.667 1.45 0.00 34.86 5.01
2025 2489 2.607635 TGCACTTTCTTCTGTGACGTTC 59.392 45.455 0.00 0.00 36.38 3.95
2279 2749 2.721859 CATCATCGTCGCCCTCGA 59.278 61.111 0.00 0.00 43.28 4.04
2292 2762 1.815003 CGAGGCATCAACGGCATCA 60.815 57.895 0.00 0.00 41.79 3.07
2309 2785 4.796231 CGAGGAGCCCACGGTTCG 62.796 72.222 3.73 0.00 33.63 3.95
2597 3653 7.324935 TCAGTCAAACCTAATATGCGAGTAAA 58.675 34.615 0.00 0.00 0.00 2.01
2769 3825 9.482627 AAGTCAAACTTTGTAAACATTGACAAA 57.517 25.926 20.77 7.01 45.51 2.83
2770 3826 9.482627 AAAGTCAAACTTTGTAAACATTGACAA 57.517 25.926 20.77 0.00 45.83 3.18
2785 3841 9.797556 GTATTAGTTTTGGTGAAAGTCAAACTT 57.202 29.630 1.25 0.00 40.80 2.66
2786 3842 8.962679 TGTATTAGTTTTGGTGAAAGTCAAACT 58.037 29.630 0.00 0.00 33.29 2.66
2787 3843 9.016623 GTGTATTAGTTTTGGTGAAAGTCAAAC 57.983 33.333 0.00 0.00 33.29 2.93
2788 3844 7.911205 CGTGTATTAGTTTTGGTGAAAGTCAAA 59.089 33.333 0.00 0.00 33.11 2.69
2789 3845 7.411274 CGTGTATTAGTTTTGGTGAAAGTCAA 58.589 34.615 0.00 0.00 33.11 3.18
2790 3846 6.017770 CCGTGTATTAGTTTTGGTGAAAGTCA 60.018 38.462 0.00 0.00 33.11 3.41
2791 3847 6.203338 TCCGTGTATTAGTTTTGGTGAAAGTC 59.797 38.462 0.00 0.00 33.11 3.01
2792 3848 6.056884 TCCGTGTATTAGTTTTGGTGAAAGT 58.943 36.000 0.00 0.00 35.18 2.66
2793 3849 6.548441 TCCGTGTATTAGTTTTGGTGAAAG 57.452 37.500 0.00 0.00 0.00 2.62
2794 3850 7.513371 AATCCGTGTATTAGTTTTGGTGAAA 57.487 32.000 0.00 0.00 0.00 2.69
2795 3851 7.660617 TGTAATCCGTGTATTAGTTTTGGTGAA 59.339 33.333 0.00 0.00 0.00 3.18
2796 3852 7.160049 TGTAATCCGTGTATTAGTTTTGGTGA 58.840 34.615 0.00 0.00 0.00 4.02
2797 3853 7.367159 TGTAATCCGTGTATTAGTTTTGGTG 57.633 36.000 0.00 0.00 0.00 4.17
2798 3854 9.669887 TTATGTAATCCGTGTATTAGTTTTGGT 57.330 29.630 0.00 0.00 0.00 3.67
2804 3860 8.819974 CCGTTTTTATGTAATCCGTGTATTAGT 58.180 33.333 0.00 0.00 0.00 2.24
2805 3861 9.033481 TCCGTTTTTATGTAATCCGTGTATTAG 57.967 33.333 0.00 0.00 0.00 1.73
2806 3862 8.939201 TCCGTTTTTATGTAATCCGTGTATTA 57.061 30.769 0.00 0.00 0.00 0.98
2807 3863 7.011669 CCTCCGTTTTTATGTAATCCGTGTATT 59.988 37.037 0.00 0.00 0.00 1.89
2808 3864 6.480981 CCTCCGTTTTTATGTAATCCGTGTAT 59.519 38.462 0.00 0.00 0.00 2.29
2809 3865 5.811613 CCTCCGTTTTTATGTAATCCGTGTA 59.188 40.000 0.00 0.00 0.00 2.90
2810 3866 4.632688 CCTCCGTTTTTATGTAATCCGTGT 59.367 41.667 0.00 0.00 0.00 4.49
2811 3867 4.034742 CCCTCCGTTTTTATGTAATCCGTG 59.965 45.833 0.00 0.00 0.00 4.94
2812 3868 4.080975 TCCCTCCGTTTTTATGTAATCCGT 60.081 41.667 0.00 0.00 0.00 4.69
2813 3869 4.444536 TCCCTCCGTTTTTATGTAATCCG 58.555 43.478 0.00 0.00 0.00 4.18
2814 3870 5.434408 ACTCCCTCCGTTTTTATGTAATCC 58.566 41.667 0.00 0.00 0.00 3.01
2815 3871 9.768662 TTATACTCCCTCCGTTTTTATGTAATC 57.231 33.333 0.00 0.00 0.00 1.75
2817 3873 9.956640 TTTTATACTCCCTCCGTTTTTATGTAA 57.043 29.630 0.00 0.00 0.00 2.41
2818 3874 9.382275 GTTTTATACTCCCTCCGTTTTTATGTA 57.618 33.333 0.00 0.00 0.00 2.29
2819 3875 7.884354 TGTTTTATACTCCCTCCGTTTTTATGT 59.116 33.333 0.00 0.00 0.00 2.29
2820 3876 8.271312 TGTTTTATACTCCCTCCGTTTTTATG 57.729 34.615 0.00 0.00 0.00 1.90
2821 3877 8.866970 TTGTTTTATACTCCCTCCGTTTTTAT 57.133 30.769 0.00 0.00 0.00 1.40
2822 3878 8.156165 TCTTGTTTTATACTCCCTCCGTTTTTA 58.844 33.333 0.00 0.00 0.00 1.52
2823 3879 6.999871 TCTTGTTTTATACTCCCTCCGTTTTT 59.000 34.615 0.00 0.00 0.00 1.94
2824 3880 6.536447 TCTTGTTTTATACTCCCTCCGTTTT 58.464 36.000 0.00 0.00 0.00 2.43
2825 3881 6.117975 TCTTGTTTTATACTCCCTCCGTTT 57.882 37.500 0.00 0.00 0.00 3.60
2826 3882 5.750352 TCTTGTTTTATACTCCCTCCGTT 57.250 39.130 0.00 0.00 0.00 4.44
2827 3883 5.482878 TCTTCTTGTTTTATACTCCCTCCGT 59.517 40.000 0.00 0.00 0.00 4.69
2828 3884 5.974108 TCTTCTTGTTTTATACTCCCTCCG 58.026 41.667 0.00 0.00 0.00 4.63
2829 3885 6.598457 GGTTCTTCTTGTTTTATACTCCCTCC 59.402 42.308 0.00 0.00 0.00 4.30
2830 3886 6.598457 GGGTTCTTCTTGTTTTATACTCCCTC 59.402 42.308 0.00 0.00 0.00 4.30
2831 3887 6.045106 TGGGTTCTTCTTGTTTTATACTCCCT 59.955 38.462 0.00 0.00 0.00 4.20
2832 3888 6.243148 TGGGTTCTTCTTGTTTTATACTCCC 58.757 40.000 0.00 0.00 0.00 4.30
2833 3889 7.754851 TTGGGTTCTTCTTGTTTTATACTCC 57.245 36.000 0.00 0.00 0.00 3.85
2834 3890 9.841880 GAATTGGGTTCTTCTTGTTTTATACTC 57.158 33.333 0.00 0.00 33.89 2.59
2835 3891 8.803235 GGAATTGGGTTCTTCTTGTTTTATACT 58.197 33.333 0.00 0.00 37.01 2.12
2836 3892 8.581578 TGGAATTGGGTTCTTCTTGTTTTATAC 58.418 33.333 0.00 0.00 37.01 1.47
2837 3893 8.713708 TGGAATTGGGTTCTTCTTGTTTTATA 57.286 30.769 0.00 0.00 37.01 0.98
2838 3894 7.610580 TGGAATTGGGTTCTTCTTGTTTTAT 57.389 32.000 0.00 0.00 37.01 1.40
2839 3895 7.288852 TCATGGAATTGGGTTCTTCTTGTTTTA 59.711 33.333 0.00 0.00 37.01 1.52
2840 3896 5.948742 TGGAATTGGGTTCTTCTTGTTTT 57.051 34.783 0.00 0.00 37.01 2.43
2841 3897 5.602145 TCATGGAATTGGGTTCTTCTTGTTT 59.398 36.000 0.00 0.00 37.01 2.83
2842 3898 5.147032 TCATGGAATTGGGTTCTTCTTGTT 58.853 37.500 0.00 0.00 37.01 2.83
2843 3899 4.739793 TCATGGAATTGGGTTCTTCTTGT 58.260 39.130 0.00 0.00 37.01 3.16
2844 3900 5.477984 TCTTCATGGAATTGGGTTCTTCTTG 59.522 40.000 0.00 0.00 37.01 3.02
2845 3901 5.644188 TCTTCATGGAATTGGGTTCTTCTT 58.356 37.500 0.00 0.00 37.01 2.52
2846 3902 5.261040 TCTTCATGGAATTGGGTTCTTCT 57.739 39.130 0.00 0.00 37.01 2.85
2847 3903 6.071165 ACAATCTTCATGGAATTGGGTTCTTC 60.071 38.462 15.38 0.00 37.01 2.87
2848 3904 5.781818 ACAATCTTCATGGAATTGGGTTCTT 59.218 36.000 15.38 0.00 37.01 2.52
2849 3905 5.336102 ACAATCTTCATGGAATTGGGTTCT 58.664 37.500 15.38 0.00 37.01 3.01
2850 3906 5.185635 TGACAATCTTCATGGAATTGGGTTC 59.814 40.000 15.38 8.17 36.04 3.62
2851 3907 5.047092 GTGACAATCTTCATGGAATTGGGTT 60.047 40.000 15.38 1.24 0.00 4.11
2852 3908 4.463891 GTGACAATCTTCATGGAATTGGGT 59.536 41.667 15.38 0.00 0.00 4.51
2853 3909 4.463539 TGTGACAATCTTCATGGAATTGGG 59.536 41.667 15.38 0.00 0.00 4.12
2854 3910 5.047872 TGTGTGACAATCTTCATGGAATTGG 60.048 40.000 15.38 0.00 0.00 3.16
2855 3911 6.016213 TGTGTGACAATCTTCATGGAATTG 57.984 37.500 11.59 11.59 0.00 2.32
2856 3912 6.653526 TTGTGTGACAATCTTCATGGAATT 57.346 33.333 0.00 0.00 32.34 2.17
2857 3913 6.845758 ATTGTGTGACAATCTTCATGGAAT 57.154 33.333 0.00 0.00 44.91 3.01
2858 3914 7.067372 GGATATTGTGTGACAATCTTCATGGAA 59.933 37.037 5.24 0.00 44.91 3.53
2859 3915 6.543465 GGATATTGTGTGACAATCTTCATGGA 59.457 38.462 5.24 0.00 44.91 3.41
2860 3916 6.512253 CGGATATTGTGTGACAATCTTCATGG 60.512 42.308 5.24 0.00 44.91 3.66
2861 3917 6.424683 CGGATATTGTGTGACAATCTTCATG 58.575 40.000 5.24 0.00 44.91 3.07
2862 3918 5.528690 CCGGATATTGTGTGACAATCTTCAT 59.471 40.000 0.00 0.00 44.91 2.57
2863 3919 4.875536 CCGGATATTGTGTGACAATCTTCA 59.124 41.667 0.00 0.00 44.91 3.02
2864 3920 4.876107 ACCGGATATTGTGTGACAATCTTC 59.124 41.667 9.46 4.94 44.91 2.87
2865 3921 4.635765 CACCGGATATTGTGTGACAATCTT 59.364 41.667 9.46 0.00 44.91 2.40
2866 3922 4.191544 CACCGGATATTGTGTGACAATCT 58.808 43.478 9.46 0.00 44.91 2.40
2867 3923 3.938963 ACACCGGATATTGTGTGACAATC 59.061 43.478 9.46 0.00 44.91 2.67
2869 3925 3.410631 ACACCGGATATTGTGTGACAA 57.589 42.857 9.46 0.00 43.69 3.18
2870 3926 4.538746 TTACACCGGATATTGTGTGACA 57.461 40.909 9.46 0.00 44.89 3.58
2871 3927 5.815740 AGATTTACACCGGATATTGTGTGAC 59.184 40.000 9.46 0.00 44.89 3.67
2872 3928 5.984725 AGATTTACACCGGATATTGTGTGA 58.015 37.500 9.46 0.00 44.89 3.58
2873 3929 6.677781 AAGATTTACACCGGATATTGTGTG 57.322 37.500 9.46 0.00 44.89 3.82
2874 3930 6.657541 ACAAAGATTTACACCGGATATTGTGT 59.342 34.615 9.46 2.77 46.72 3.72
2875 3931 7.083875 ACAAAGATTTACACCGGATATTGTG 57.916 36.000 9.46 0.00 38.44 3.33
2876 3932 7.148137 GGAACAAAGATTTACACCGGATATTGT 60.148 37.037 9.46 4.14 0.00 2.71
2877 3933 7.067008 AGGAACAAAGATTTACACCGGATATTG 59.933 37.037 9.46 0.00 0.00 1.90
2878 3934 7.116736 AGGAACAAAGATTTACACCGGATATT 58.883 34.615 9.46 0.00 0.00 1.28
2879 3935 6.659824 AGGAACAAAGATTTACACCGGATAT 58.340 36.000 9.46 0.00 0.00 1.63
2880 3936 6.057321 AGGAACAAAGATTTACACCGGATA 57.943 37.500 9.46 0.00 0.00 2.59
2881 3937 4.918588 AGGAACAAAGATTTACACCGGAT 58.081 39.130 9.46 0.00 0.00 4.18
2899 3955 6.867519 TCTTTCATAGTGGTCATGTAGGAA 57.132 37.500 0.00 0.00 0.00 3.36
2955 4014 6.849588 AGTAAAACGTACTTTTCGTGGAAT 57.150 33.333 0.00 0.00 41.38 3.01
2962 4021 9.023967 TGTCAGAGTTAGTAAAACGTACTTTTC 57.976 33.333 0.00 0.00 33.84 2.29
2985 4044 6.060028 TCAGCAACTAAAGTCACATTTGTC 57.940 37.500 0.00 0.00 0.00 3.18
2987 4046 6.498304 ACTTCAGCAACTAAAGTCACATTTG 58.502 36.000 0.00 0.00 0.00 2.32
3039 4098 7.425577 TGCCATGATCGTGATTATTTTCTAG 57.574 36.000 16.77 0.00 0.00 2.43
3040 4099 7.984422 ATGCCATGATCGTGATTATTTTCTA 57.016 32.000 16.77 0.00 0.00 2.10
3043 4102 6.919662 GTCAATGCCATGATCGTGATTATTTT 59.080 34.615 16.77 0.00 0.00 1.82
3047 4106 4.450053 TGTCAATGCCATGATCGTGATTA 58.550 39.130 16.77 2.62 0.00 1.75
3048 4107 3.281158 TGTCAATGCCATGATCGTGATT 58.719 40.909 16.77 6.28 0.00 2.57
3061 4120 8.236586 TCAGTATGTCAGTAATTTTGTCAATGC 58.763 33.333 0.00 0.00 37.40 3.56
3066 4125 9.901724 CGTAATCAGTATGTCAGTAATTTTGTC 57.098 33.333 0.00 0.00 37.40 3.18
3086 4145 4.683832 ACATGCTAGTCTGGTTCGTAATC 58.316 43.478 0.00 0.00 0.00 1.75
3092 4151 4.599047 CGTAGTACATGCTAGTCTGGTTC 58.401 47.826 0.38 0.00 0.00 3.62
3149 4208 8.635765 TCTCCTGTTAATTTTTGTCTTAGCAT 57.364 30.769 0.00 0.00 0.00 3.79
3152 4211 9.712305 TCTCTCTCCTGTTAATTTTTGTCTTAG 57.288 33.333 0.00 0.00 0.00 2.18
3168 4227 8.091449 GGGTATAACATGTTTATCTCTCTCCTG 58.909 40.741 17.78 0.00 0.00 3.86
3176 4235 6.989155 TCGGAGGGTATAACATGTTTATCT 57.011 37.500 17.78 7.73 0.00 1.98
3181 4240 3.006537 CCGATCGGAGGGTATAACATGTT 59.993 47.826 30.62 16.68 37.50 2.71
3184 4243 1.549170 GCCGATCGGAGGGTATAACAT 59.451 52.381 37.64 0.00 37.50 2.71
3189 4248 1.908793 CTGGCCGATCGGAGGGTAT 60.909 63.158 37.64 0.00 37.50 2.73
3190 4249 2.520982 CTGGCCGATCGGAGGGTA 60.521 66.667 37.64 15.88 37.50 3.69
3227 4286 3.951655 GATGTTGCTGTTGCCGCCG 62.952 63.158 0.00 0.00 38.71 6.46
3228 4287 2.126346 GATGTTGCTGTTGCCGCC 60.126 61.111 0.00 0.00 38.71 6.13
3229 4288 2.126346 GGATGTTGCTGTTGCCGC 60.126 61.111 0.00 0.00 38.71 6.53
3230 4289 0.387622 CAAGGATGTTGCTGTTGCCG 60.388 55.000 0.00 0.00 38.71 5.69
3231 4290 0.037975 CCAAGGATGTTGCTGTTGCC 60.038 55.000 0.00 0.00 38.71 4.52
3232 4291 0.675633 ACCAAGGATGTTGCTGTTGC 59.324 50.000 0.00 0.00 40.20 4.17
3233 4292 1.000060 CCACCAAGGATGTTGCTGTTG 60.000 52.381 0.00 0.00 41.22 3.33
3234 4293 1.331214 CCACCAAGGATGTTGCTGTT 58.669 50.000 0.00 0.00 41.22 3.16
3235 4294 1.181098 GCCACCAAGGATGTTGCTGT 61.181 55.000 0.00 0.00 41.22 4.40
3236 4295 1.588082 GCCACCAAGGATGTTGCTG 59.412 57.895 0.00 0.00 41.22 4.41
3237 4296 1.607467 GGCCACCAAGGATGTTGCT 60.607 57.895 0.00 0.00 41.22 3.91
3238 4297 1.187567 AAGGCCACCAAGGATGTTGC 61.188 55.000 5.01 0.00 41.22 4.17
3239 4298 0.890683 GAAGGCCACCAAGGATGTTG 59.109 55.000 5.01 0.00 41.22 3.33
3240 4299 0.779997 AGAAGGCCACCAAGGATGTT 59.220 50.000 5.01 0.00 41.22 2.71
3241 4300 0.779997 AAGAAGGCCACCAAGGATGT 59.220 50.000 5.01 0.00 41.22 3.06
3242 4301 1.005215 AGAAGAAGGCCACCAAGGATG 59.995 52.381 5.01 0.00 41.22 3.51
3243 4302 1.283321 GAGAAGAAGGCCACCAAGGAT 59.717 52.381 5.01 0.00 41.22 3.24
3244 4303 0.693049 GAGAAGAAGGCCACCAAGGA 59.307 55.000 5.01 0.00 41.22 3.36
3245 4304 0.674895 CGAGAAGAAGGCCACCAAGG 60.675 60.000 5.01 0.00 41.84 3.61
3246 4305 0.674895 CCGAGAAGAAGGCCACCAAG 60.675 60.000 5.01 0.00 0.00 3.61
3247 4306 1.374947 CCGAGAAGAAGGCCACCAA 59.625 57.895 5.01 0.00 0.00 3.67
3248 4307 3.068881 CCGAGAAGAAGGCCACCA 58.931 61.111 5.01 0.00 0.00 4.17
3254 4313 1.537202 CCAACAAAGCCGAGAAGAAGG 59.463 52.381 0.00 0.00 0.00 3.46
3255 4314 1.068954 GCCAACAAAGCCGAGAAGAAG 60.069 52.381 0.00 0.00 0.00 2.85
3256 4315 0.951558 GCCAACAAAGCCGAGAAGAA 59.048 50.000 0.00 0.00 0.00 2.52
3257 4316 0.179032 TGCCAACAAAGCCGAGAAGA 60.179 50.000 0.00 0.00 0.00 2.87
3258 4317 0.239347 CTGCCAACAAAGCCGAGAAG 59.761 55.000 0.00 0.00 0.00 2.85
3259 4318 0.465460 ACTGCCAACAAAGCCGAGAA 60.465 50.000 0.00 0.00 0.00 2.87
3260 4319 1.148273 ACTGCCAACAAAGCCGAGA 59.852 52.632 0.00 0.00 0.00 4.04
3261 4320 1.283793 CACTGCCAACAAAGCCGAG 59.716 57.895 0.00 0.00 0.00 4.63
3262 4321 2.192861 CCACTGCCAACAAAGCCGA 61.193 57.895 0.00 0.00 0.00 5.54
3263 4322 2.192861 TCCACTGCCAACAAAGCCG 61.193 57.895 0.00 0.00 0.00 5.52
3264 4323 1.363807 GTCCACTGCCAACAAAGCC 59.636 57.895 0.00 0.00 0.00 4.35
3265 4324 0.675633 ATGTCCACTGCCAACAAAGC 59.324 50.000 0.00 0.00 0.00 3.51
3266 4325 1.000060 CCATGTCCACTGCCAACAAAG 60.000 52.381 0.00 0.00 0.00 2.77
3267 4326 1.039068 CCATGTCCACTGCCAACAAA 58.961 50.000 0.00 0.00 0.00 2.83
3268 4327 0.106268 ACCATGTCCACTGCCAACAA 60.106 50.000 0.00 0.00 0.00 2.83
3269 4328 0.822944 CACCATGTCCACTGCCAACA 60.823 55.000 0.00 0.00 0.00 3.33
3270 4329 0.537143 TCACCATGTCCACTGCCAAC 60.537 55.000 0.00 0.00 0.00 3.77
3271 4330 0.537143 GTCACCATGTCCACTGCCAA 60.537 55.000 0.00 0.00 0.00 4.52
3272 4331 1.073025 GTCACCATGTCCACTGCCA 59.927 57.895 0.00 0.00 0.00 4.92
3273 4332 2.034879 CGTCACCATGTCCACTGCC 61.035 63.158 0.00 0.00 0.00 4.85
3274 4333 0.391661 ATCGTCACCATGTCCACTGC 60.392 55.000 0.00 0.00 0.00 4.40
3275 4334 1.066929 TCATCGTCACCATGTCCACTG 60.067 52.381 0.00 0.00 0.00 3.66
3276 4335 1.266178 TCATCGTCACCATGTCCACT 58.734 50.000 0.00 0.00 0.00 4.00
3277 4336 2.002586 CTTCATCGTCACCATGTCCAC 58.997 52.381 0.00 0.00 0.00 4.02
3278 4337 1.899142 TCTTCATCGTCACCATGTCCA 59.101 47.619 0.00 0.00 0.00 4.02
3279 4338 2.271800 GTCTTCATCGTCACCATGTCC 58.728 52.381 0.00 0.00 0.00 4.02
3280 4339 1.920574 CGTCTTCATCGTCACCATGTC 59.079 52.381 0.00 0.00 0.00 3.06
3281 4340 1.544246 TCGTCTTCATCGTCACCATGT 59.456 47.619 0.00 0.00 0.00 3.21
3282 4341 1.920574 GTCGTCTTCATCGTCACCATG 59.079 52.381 0.00 0.00 0.00 3.66
3283 4342 1.467543 CGTCGTCTTCATCGTCACCAT 60.468 52.381 0.00 0.00 0.00 3.55
3284 4343 0.109919 CGTCGTCTTCATCGTCACCA 60.110 55.000 0.00 0.00 0.00 4.17
3285 4344 1.403972 GCGTCGTCTTCATCGTCACC 61.404 60.000 0.00 0.00 0.00 4.02
3286 4345 1.721257 CGCGTCGTCTTCATCGTCAC 61.721 60.000 0.00 0.00 0.00 3.67
3287 4346 1.511254 CGCGTCGTCTTCATCGTCA 60.511 57.895 0.00 0.00 0.00 4.35
3288 4347 2.215604 CCGCGTCGTCTTCATCGTC 61.216 63.158 4.92 0.00 0.00 4.20
3289 4348 2.202440 CCGCGTCGTCTTCATCGT 60.202 61.111 4.92 0.00 0.00 3.73
3290 4349 2.099638 TCCGCGTCGTCTTCATCG 59.900 61.111 4.92 0.00 0.00 3.84
3291 4350 0.525668 ATGTCCGCGTCGTCTTCATC 60.526 55.000 4.92 0.00 0.00 2.92
3292 4351 0.802222 CATGTCCGCGTCGTCTTCAT 60.802 55.000 4.92 0.00 0.00 2.57
3293 4352 1.443702 CATGTCCGCGTCGTCTTCA 60.444 57.895 4.92 0.00 0.00 3.02
3294 4353 2.158959 CCATGTCCGCGTCGTCTTC 61.159 63.158 4.92 0.00 0.00 2.87
3295 4354 2.126071 CCATGTCCGCGTCGTCTT 60.126 61.111 4.92 0.00 0.00 3.01
3296 4355 3.060000 TCCATGTCCGCGTCGTCT 61.060 61.111 4.92 0.00 0.00 4.18
3297 4356 2.879462 GTCCATGTCCGCGTCGTC 60.879 66.667 4.92 0.00 0.00 4.20
3298 4357 4.771356 CGTCCATGTCCGCGTCGT 62.771 66.667 4.92 0.00 0.00 4.34
3299 4358 3.957027 TTCGTCCATGTCCGCGTCG 62.957 63.158 4.92 0.00 0.00 5.12
3300 4359 1.518572 ATTCGTCCATGTCCGCGTC 60.519 57.895 4.92 0.00 0.00 5.19
3301 4360 1.809619 CATTCGTCCATGTCCGCGT 60.810 57.895 4.92 0.00 0.00 6.01
3302 4361 0.875908 ATCATTCGTCCATGTCCGCG 60.876 55.000 0.00 0.00 0.00 6.46
3303 4362 0.583438 CATCATTCGTCCATGTCCGC 59.417 55.000 0.00 0.00 0.00 5.54
3304 4363 1.220529 CCATCATTCGTCCATGTCCG 58.779 55.000 0.00 0.00 0.00 4.79
3305 4364 1.942657 CACCATCATTCGTCCATGTCC 59.057 52.381 0.00 0.00 0.00 4.02
3306 4365 2.905075 TCACCATCATTCGTCCATGTC 58.095 47.619 0.00 0.00 0.00 3.06
3307 4366 3.009723 GTTCACCATCATTCGTCCATGT 58.990 45.455 0.00 0.00 0.00 3.21
3308 4367 3.009026 TGTTCACCATCATTCGTCCATG 58.991 45.455 0.00 0.00 0.00 3.66
3309 4368 3.273434 CTGTTCACCATCATTCGTCCAT 58.727 45.455 0.00 0.00 0.00 3.41
3310 4369 2.038426 ACTGTTCACCATCATTCGTCCA 59.962 45.455 0.00 0.00 0.00 4.02
3311 4370 2.673368 GACTGTTCACCATCATTCGTCC 59.327 50.000 0.00 0.00 0.00 4.79
3312 4371 2.345641 CGACTGTTCACCATCATTCGTC 59.654 50.000 0.00 0.00 34.01 4.20
3313 4372 2.288825 ACGACTGTTCACCATCATTCGT 60.289 45.455 5.12 5.12 42.10 3.85
3314 4373 2.092681 CACGACTGTTCACCATCATTCG 59.907 50.000 0.00 0.00 40.63 3.34
3315 4374 3.067106 ACACGACTGTTCACCATCATTC 58.933 45.455 0.00 0.00 0.00 2.67
3316 4375 3.126001 ACACGACTGTTCACCATCATT 57.874 42.857 0.00 0.00 0.00 2.57
3317 4376 2.839486 ACACGACTGTTCACCATCAT 57.161 45.000 0.00 0.00 0.00 2.45
3318 4377 2.029380 CCTACACGACTGTTCACCATCA 60.029 50.000 0.00 0.00 0.00 3.07
3319 4378 2.230508 TCCTACACGACTGTTCACCATC 59.769 50.000 0.00 0.00 0.00 3.51
3320 4379 2.231478 CTCCTACACGACTGTTCACCAT 59.769 50.000 0.00 0.00 0.00 3.55
3321 4380 1.611977 CTCCTACACGACTGTTCACCA 59.388 52.381 0.00 0.00 0.00 4.17
3322 4381 1.884579 TCTCCTACACGACTGTTCACC 59.115 52.381 0.00 0.00 0.00 4.02
3323 4382 2.292569 TGTCTCCTACACGACTGTTCAC 59.707 50.000 0.00 0.00 31.43 3.18
3324 4383 2.578786 TGTCTCCTACACGACTGTTCA 58.421 47.619 0.00 0.00 31.43 3.18
3352 4411 4.023193 CGAGGTCAGTGGCAATTAGTTTTT 60.023 41.667 0.00 0.00 0.00 1.94
3353 4412 3.502211 CGAGGTCAGTGGCAATTAGTTTT 59.498 43.478 0.00 0.00 0.00 2.43
3354 4413 3.074412 CGAGGTCAGTGGCAATTAGTTT 58.926 45.455 0.00 0.00 0.00 2.66
3355 4414 2.615493 CCGAGGTCAGTGGCAATTAGTT 60.615 50.000 0.00 0.00 0.00 2.24
3356 4415 1.066143 CCGAGGTCAGTGGCAATTAGT 60.066 52.381 0.00 0.00 0.00 2.24
3357 4416 1.656652 CCGAGGTCAGTGGCAATTAG 58.343 55.000 0.00 0.00 0.00 1.73
3358 4417 3.853104 CCGAGGTCAGTGGCAATTA 57.147 52.632 0.00 0.00 0.00 1.40
3359 4418 4.722193 CCGAGGTCAGTGGCAATT 57.278 55.556 0.00 0.00 0.00 2.32
3364 4423 4.135153 CCGAGCCGAGGTCAGTGG 62.135 72.222 0.00 0.00 0.00 4.00
3365 4424 4.803426 GCCGAGCCGAGGTCAGTG 62.803 72.222 4.42 0.00 0.00 3.66
3367 4426 4.200283 GAGCCGAGCCGAGGTCAG 62.200 72.222 4.42 0.00 0.00 3.51
3369 4428 2.962697 GAATGAGCCGAGCCGAGGTC 62.963 65.000 0.00 3.20 0.00 3.85
3370 4429 3.077556 AATGAGCCGAGCCGAGGT 61.078 61.111 0.00 0.00 0.00 3.85
3371 4430 2.279784 GAATGAGCCGAGCCGAGG 60.280 66.667 0.00 0.00 0.00 4.63
3372 4431 1.299773 GAGAATGAGCCGAGCCGAG 60.300 63.158 0.00 0.00 0.00 4.63
3373 4432 2.808315 GAGAATGAGCCGAGCCGA 59.192 61.111 0.00 0.00 0.00 5.54
3374 4433 2.656651 CGAGAATGAGCCGAGCCG 60.657 66.667 0.00 0.00 0.00 5.52
3375 4434 2.964389 GCGAGAATGAGCCGAGCC 60.964 66.667 0.00 0.00 0.00 4.70
3376 4435 1.811266 TTGCGAGAATGAGCCGAGC 60.811 57.895 0.00 0.00 0.00 5.03
3377 4436 0.459237 AGTTGCGAGAATGAGCCGAG 60.459 55.000 0.00 0.00 0.00 4.63
3378 4437 0.458543 GAGTTGCGAGAATGAGCCGA 60.459 55.000 0.00 0.00 0.00 5.54
3379 4438 0.737367 TGAGTTGCGAGAATGAGCCG 60.737 55.000 0.00 0.00 0.00 5.52
3380 4439 1.396301 CTTGAGTTGCGAGAATGAGCC 59.604 52.381 0.00 0.00 0.00 4.70
3381 4440 1.396301 CCTTGAGTTGCGAGAATGAGC 59.604 52.381 0.00 0.00 0.00 4.26
3382 4441 1.396301 GCCTTGAGTTGCGAGAATGAG 59.604 52.381 0.00 0.00 0.00 2.90
3383 4442 1.442769 GCCTTGAGTTGCGAGAATGA 58.557 50.000 0.00 0.00 0.00 2.57
3384 4443 3.984292 GCCTTGAGTTGCGAGAATG 57.016 52.632 0.00 0.00 0.00 2.67
3391 4450 3.793144 CGCCTCGCCTTGAGTTGC 61.793 66.667 0.00 0.00 43.64 4.17
3392 4451 2.048222 TCGCCTCGCCTTGAGTTG 60.048 61.111 0.00 0.00 43.64 3.16
3393 4452 2.262915 CTCGCCTCGCCTTGAGTT 59.737 61.111 0.00 0.00 43.64 3.01
3394 4453 3.764466 CCTCGCCTCGCCTTGAGT 61.764 66.667 0.00 0.00 43.64 3.41
3434 4493 2.689658 TGAGAAGAGAAGTGGTTCCCA 58.310 47.619 0.00 0.00 32.48 4.37
3435 4494 3.771577 TTGAGAAGAGAAGTGGTTCCC 57.228 47.619 0.00 0.00 32.48 3.97
3436 4495 4.709250 AGTTTGAGAAGAGAAGTGGTTCC 58.291 43.478 0.00 0.00 32.48 3.62
3437 4496 4.752604 GGAGTTTGAGAAGAGAAGTGGTTC 59.247 45.833 0.00 0.00 0.00 3.62
3438 4497 4.164221 TGGAGTTTGAGAAGAGAAGTGGTT 59.836 41.667 0.00 0.00 0.00 3.67
3439 4498 3.711704 TGGAGTTTGAGAAGAGAAGTGGT 59.288 43.478 0.00 0.00 0.00 4.16
3440 4499 4.342862 TGGAGTTTGAGAAGAGAAGTGG 57.657 45.455 0.00 0.00 0.00 4.00
3441 4500 6.091986 GCTATTGGAGTTTGAGAAGAGAAGTG 59.908 42.308 0.00 0.00 0.00 3.16
3442 4501 6.169800 GCTATTGGAGTTTGAGAAGAGAAGT 58.830 40.000 0.00 0.00 0.00 3.01
3443 4502 6.169094 TGCTATTGGAGTTTGAGAAGAGAAG 58.831 40.000 0.00 0.00 0.00 2.85
3444 4503 6.114187 TGCTATTGGAGTTTGAGAAGAGAA 57.886 37.500 0.00 0.00 0.00 2.87
3445 4504 5.745312 TGCTATTGGAGTTTGAGAAGAGA 57.255 39.130 0.00 0.00 0.00 3.10
3446 4505 5.879223 ACATGCTATTGGAGTTTGAGAAGAG 59.121 40.000 0.00 0.00 0.00 2.85
3447 4506 5.645067 CACATGCTATTGGAGTTTGAGAAGA 59.355 40.000 0.00 0.00 0.00 2.87
3448 4507 5.163683 CCACATGCTATTGGAGTTTGAGAAG 60.164 44.000 0.00 0.00 34.46 2.85
3449 4508 4.701651 CCACATGCTATTGGAGTTTGAGAA 59.298 41.667 0.00 0.00 34.46 2.87
3450 4509 4.019411 TCCACATGCTATTGGAGTTTGAGA 60.019 41.667 0.00 0.00 36.96 3.27
3451 4510 4.264253 TCCACATGCTATTGGAGTTTGAG 58.736 43.478 0.00 0.00 36.96 3.02
3452 4511 4.299586 TCCACATGCTATTGGAGTTTGA 57.700 40.909 0.00 0.00 36.96 2.69
3453 4512 4.701651 TCTTCCACATGCTATTGGAGTTTG 59.298 41.667 3.28 0.00 42.93 2.93
3454 4513 4.922206 TCTTCCACATGCTATTGGAGTTT 58.078 39.130 3.28 0.00 42.93 2.66
3455 4514 4.225942 TCTCTTCCACATGCTATTGGAGTT 59.774 41.667 3.28 0.00 42.93 3.01
3456 4515 3.776969 TCTCTTCCACATGCTATTGGAGT 59.223 43.478 3.28 0.00 42.93 3.85
3457 4516 4.412796 TCTCTTCCACATGCTATTGGAG 57.587 45.455 3.28 0.64 42.93 3.86
3458 4517 4.842531 TTCTCTTCCACATGCTATTGGA 57.157 40.909 0.00 0.00 40.30 3.53
3459 4518 4.518211 GGATTCTCTTCCACATGCTATTGG 59.482 45.833 0.00 0.00 35.72 3.16
3460 4519 4.518211 GGGATTCTCTTCCACATGCTATTG 59.482 45.833 0.00 0.00 37.53 1.90
3461 4520 4.414846 AGGGATTCTCTTCCACATGCTATT 59.585 41.667 0.00 0.00 37.53 1.73
3462 4521 3.979347 AGGGATTCTCTTCCACATGCTAT 59.021 43.478 0.00 0.00 37.53 2.97
3463 4522 3.387962 AGGGATTCTCTTCCACATGCTA 58.612 45.455 0.00 0.00 37.53 3.49
3464 4523 2.203584 AGGGATTCTCTTCCACATGCT 58.796 47.619 0.00 0.00 37.53 3.79
3465 4524 2.725221 AGGGATTCTCTTCCACATGC 57.275 50.000 0.00 0.00 37.53 4.06
3466 4525 6.939163 CCTTATAAGGGATTCTCTTCCACATG 59.061 42.308 22.09 0.00 42.66 3.21
3467 4526 6.851836 TCCTTATAAGGGATTCTCTTCCACAT 59.148 38.462 27.65 0.00 46.47 3.21
3468 4527 6.209774 TCCTTATAAGGGATTCTCTTCCACA 58.790 40.000 27.65 3.96 46.47 4.17
3469 4528 6.239743 CCTCCTTATAAGGGATTCTCTTCCAC 60.240 46.154 27.65 0.00 46.47 4.02
3470 4529 5.846714 CCTCCTTATAAGGGATTCTCTTCCA 59.153 44.000 27.65 6.36 46.47 3.53
3471 4530 5.847265 ACCTCCTTATAAGGGATTCTCTTCC 59.153 44.000 27.65 0.00 46.47 3.46
3472 4531 6.014070 GGACCTCCTTATAAGGGATTCTCTTC 60.014 46.154 27.65 13.96 46.47 2.87
3473 4532 5.847265 GGACCTCCTTATAAGGGATTCTCTT 59.153 44.000 27.65 3.86 46.47 2.85
3474 4533 5.102609 TGGACCTCCTTATAAGGGATTCTCT 60.103 44.000 27.65 6.98 46.47 3.10
3475 4534 5.155905 TGGACCTCCTTATAAGGGATTCTC 58.844 45.833 27.65 15.80 46.47 2.87
3476 4535 5.171541 TGGACCTCCTTATAAGGGATTCT 57.828 43.478 27.65 9.17 46.47 2.40
3477 4536 5.369993 AGTTGGACCTCCTTATAAGGGATTC 59.630 44.000 27.65 20.06 46.47 2.52
3478 4537 5.297799 AGTTGGACCTCCTTATAAGGGATT 58.702 41.667 27.65 13.96 46.47 3.01
3479 4538 4.908481 GAGTTGGACCTCCTTATAAGGGAT 59.092 45.833 27.65 15.32 46.47 3.85
3480 4539 4.296056 GAGTTGGACCTCCTTATAAGGGA 58.704 47.826 27.65 15.21 46.47 4.20
3481 4540 3.391626 GGAGTTGGACCTCCTTATAAGGG 59.608 52.174 27.65 18.78 46.34 3.95
3482 4541 4.691326 GGAGTTGGACCTCCTTATAAGG 57.309 50.000 23.54 23.54 46.34 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.