Multiple sequence alignment - TraesCS3D01G384100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G384100 chr3D 100.000 4289 0 0 1 4289 499842858 499847146 0.000000e+00 7921.0
1 TraesCS3D01G384100 chr3D 89.657 1634 117 28 1798 3385 499631035 499632662 0.000000e+00 2034.0
2 TraesCS3D01G384100 chr3D 94.112 1070 63 0 2063 3132 499040514 499041583 0.000000e+00 1628.0
3 TraesCS3D01G384100 chr3D 84.589 863 84 29 964 1803 499630377 499631213 0.000000e+00 811.0
4 TraesCS3D01G384100 chr3D 82.591 247 28 10 939 1182 499039446 499039680 2.020000e-48 204.0
5 TraesCS3D01G384100 chr3A 92.897 1802 73 30 1798 3558 639249967 639248180 0.000000e+00 2567.0
6 TraesCS3D01G384100 chr3A 92.095 1341 79 14 2063 3385 639085847 639087178 0.000000e+00 1864.0
7 TraesCS3D01G384100 chr3A 86.497 748 61 13 1065 1803 639250506 639249790 0.000000e+00 785.0
8 TraesCS3D01G384100 chr3A 91.616 489 35 4 1276 1761 692863709 692863224 0.000000e+00 671.0
9 TraesCS3D01G384100 chr3A 94.077 287 12 3 3736 4021 639248189 639247907 8.520000e-117 431.0
10 TraesCS3D01G384100 chr3A 86.891 267 9 10 4023 4289 639247867 639247627 4.220000e-70 276.0
11 TraesCS3D01G384100 chr3A 90.164 183 17 1 521 703 639251197 639251016 1.990000e-58 237.0
12 TraesCS3D01G384100 chr3A 97.391 115 3 0 99 213 639091957 639092071 3.380000e-46 196.0
13 TraesCS3D01G384100 chr3A 81.277 235 30 7 945 1174 639084826 639085051 1.230000e-40 178.0
14 TraesCS3D01G384100 chr3A 85.897 156 12 6 3563 3716 639248291 639248144 1.600000e-34 158.0
15 TraesCS3D01G384100 chr3B 95.358 1551 47 4 1691 3233 660699865 660701398 0.000000e+00 2442.0
16 TraesCS3D01G384100 chr3B 91.001 1378 87 19 2038 3385 660027962 660029332 0.000000e+00 1823.0
17 TraesCS3D01G384100 chr3B 90.438 1004 68 19 700 1693 660698135 660699120 0.000000e+00 1297.0
18 TraesCS3D01G384100 chr3B 87.585 588 45 17 2818 3385 660381125 660381704 0.000000e+00 656.0
19 TraesCS3D01G384100 chr3B 85.049 408 39 8 99 504 660387375 660387762 3.110000e-106 396.0
20 TraesCS3D01G384100 chr3B 83.033 389 37 15 3005 3385 660030752 660031119 4.140000e-85 326.0
21 TraesCS3D01G384100 chr3B 90.110 182 17 1 521 702 660388069 660388249 7.170000e-58 235.0
22 TraesCS3D01G384100 chr3B 84.337 249 25 10 943 1182 660027007 660027250 9.280000e-57 231.0
23 TraesCS3D01G384100 chr3B 77.914 163 20 13 3358 3507 660701491 660701650 2.120000e-13 87.9
24 TraesCS3D01G384100 chr5B 90.388 1134 87 11 1990 3116 22092972 22094090 0.000000e+00 1471.0
25 TraesCS3D01G384100 chr5B 83.243 555 66 18 196 728 544426073 544426622 6.450000e-133 484.0
26 TraesCS3D01G384100 chr2B 89.349 676 61 8 1089 1761 131907311 131906644 0.000000e+00 839.0
27 TraesCS3D01G384100 chr5A 93.506 539 33 2 2578 3116 6523015 6523551 0.000000e+00 800.0
28 TraesCS3D01G384100 chr5A 90.239 502 43 4 1263 1761 675836419 675836917 0.000000e+00 651.0
29 TraesCS3D01G384100 chr5A 82.258 558 68 20 196 728 557101049 557100498 1.820000e-123 453.0
30 TraesCS3D01G384100 chr5A 81.786 560 71 20 196 730 632143644 632143091 1.420000e-119 440.0
31 TraesCS3D01G384100 chr5A 90.438 251 18 2 2305 2549 6522772 6523022 4.140000e-85 326.0
32 TraesCS3D01G384100 chr1A 91.036 502 39 4 1263 1761 10196812 10196314 0.000000e+00 673.0
33 TraesCS3D01G384100 chr7A 90.837 502 40 4 1263 1761 636330972 636330474 0.000000e+00 667.0
34 TraesCS3D01G384100 chr7A 85.213 541 66 11 196 728 619289070 619289604 1.050000e-150 544.0
35 TraesCS3D01G384100 chr6A 90.871 482 38 4 1283 1761 32010905 32011383 3.620000e-180 641.0
36 TraesCS3D01G384100 chr2A 89.841 502 43 6 1263 1761 742470276 742469780 4.680000e-179 638.0
37 TraesCS3D01G384100 chr2A 81.227 554 73 20 196 724 207357027 207357574 6.630000e-113 418.0
38 TraesCS3D01G384100 chr2A 81.468 545 69 16 196 714 398713252 398713790 6.630000e-113 418.0
39 TraesCS3D01G384100 chr5D 79.964 549 67 24 196 712 446884499 446883962 8.760000e-97 364.0
40 TraesCS3D01G384100 chr5D 92.308 78 6 0 14 91 483633512 483633435 1.260000e-20 111.0
41 TraesCS3D01G384100 chrUn 88.148 270 28 3 196 464 382376231 382375965 6.920000e-83 318.0
42 TraesCS3D01G384100 chrUn 88.148 270 28 3 196 464 475224627 475224361 6.920000e-83 318.0
43 TraesCS3D01G384100 chr6B 90.722 97 8 1 4 99 353877648 353877552 1.250000e-25 128.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G384100 chr3D 499842858 499847146 4288 False 7921.000000 7921 100.000000 1 4289 1 chr3D.!!$F1 4288
1 TraesCS3D01G384100 chr3D 499630377 499632662 2285 False 1422.500000 2034 87.123000 964 3385 2 chr3D.!!$F3 2421
2 TraesCS3D01G384100 chr3D 499039446 499041583 2137 False 916.000000 1628 88.351500 939 3132 2 chr3D.!!$F2 2193
3 TraesCS3D01G384100 chr3A 639084826 639087178 2352 False 1021.000000 1864 86.686000 945 3385 2 chr3A.!!$F2 2440
4 TraesCS3D01G384100 chr3A 639247627 639251197 3570 True 742.333333 2567 89.403833 521 4289 6 chr3A.!!$R2 3768
5 TraesCS3D01G384100 chr3B 660698135 660701650 3515 False 1275.633333 2442 87.903333 700 3507 3 chr3B.!!$F4 2807
6 TraesCS3D01G384100 chr3B 660027007 660031119 4112 False 793.333333 1823 86.123667 943 3385 3 chr3B.!!$F2 2442
7 TraesCS3D01G384100 chr3B 660381125 660381704 579 False 656.000000 656 87.585000 2818 3385 1 chr3B.!!$F1 567
8 TraesCS3D01G384100 chr3B 660387375 660388249 874 False 315.500000 396 87.579500 99 702 2 chr3B.!!$F3 603
9 TraesCS3D01G384100 chr5B 22092972 22094090 1118 False 1471.000000 1471 90.388000 1990 3116 1 chr5B.!!$F1 1126
10 TraesCS3D01G384100 chr5B 544426073 544426622 549 False 484.000000 484 83.243000 196 728 1 chr5B.!!$F2 532
11 TraesCS3D01G384100 chr2B 131906644 131907311 667 True 839.000000 839 89.349000 1089 1761 1 chr2B.!!$R1 672
12 TraesCS3D01G384100 chr5A 6522772 6523551 779 False 563.000000 800 91.972000 2305 3116 2 chr5A.!!$F2 811
13 TraesCS3D01G384100 chr5A 557100498 557101049 551 True 453.000000 453 82.258000 196 728 1 chr5A.!!$R1 532
14 TraesCS3D01G384100 chr5A 632143091 632143644 553 True 440.000000 440 81.786000 196 730 1 chr5A.!!$R2 534
15 TraesCS3D01G384100 chr7A 619289070 619289604 534 False 544.000000 544 85.213000 196 728 1 chr7A.!!$F1 532
16 TraesCS3D01G384100 chr2A 207357027 207357574 547 False 418.000000 418 81.227000 196 724 1 chr2A.!!$F1 528
17 TraesCS3D01G384100 chr2A 398713252 398713790 538 False 418.000000 418 81.468000 196 714 1 chr2A.!!$F2 518
18 TraesCS3D01G384100 chr5D 446883962 446884499 537 True 364.000000 364 79.964000 196 712 1 chr5D.!!$R1 516

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
92 93 0.034089 AGCCGGCAGGATTTTAGCTT 60.034 50.0 31.54 0.0 41.02 3.74 F
1218 1738 0.098200 TCTCGCGTGTAGATCCGTTG 59.902 55.0 5.77 0.0 0.00 4.10 F
1686 3194 0.541296 ATTGGTTTGCTCTGCTGCCT 60.541 50.0 0.00 0.0 0.00 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1893 3410 0.095935 GTATCTGCGCAACAGCACAG 59.904 55.000 13.05 0.0 46.76 3.66 R
2822 4450 0.038166 GGAAGACAATGGCAGGGACA 59.962 55.000 0.00 0.0 0.00 4.02 R
3479 6957 1.072806 ACTGAGATGTTGCTTCAGCCA 59.927 47.619 0.00 0.0 41.18 4.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 4.753877 CAGAACGGACGAGCGCGA 62.754 66.667 19.05 0.00 41.64 5.87
19 20 4.755614 AGAACGGACGAGCGCGAC 62.756 66.667 19.05 10.88 41.64 5.19
26 27 4.415332 ACGAGCGCGACGTTGGAT 62.415 61.111 24.44 6.98 41.18 3.41
27 28 3.179265 CGAGCGCGACGTTGGATT 61.179 61.111 12.10 0.00 40.82 3.01
28 29 2.695646 GAGCGCGACGTTGGATTC 59.304 61.111 12.10 0.00 0.00 2.52
29 30 3.126722 GAGCGCGACGTTGGATTCG 62.127 63.158 12.10 0.37 38.31 3.34
30 31 3.176578 GCGCGACGTTGGATTCGA 61.177 61.111 12.10 0.00 37.43 3.71
31 32 2.722731 GCGCGACGTTGGATTCGAA 61.723 57.895 12.10 0.00 37.43 3.71
32 33 1.995991 CGCGACGTTGGATTCGAAT 59.004 52.632 11.20 11.20 37.43 3.34
33 34 0.044161 CGCGACGTTGGATTCGAATC 60.044 55.000 26.64 26.64 37.43 2.52
34 35 0.044161 GCGACGTTGGATTCGAATCG 60.044 55.000 27.21 20.24 37.43 3.34
35 36 0.570734 CGACGTTGGATTCGAATCGG 59.429 55.000 27.21 19.19 37.43 4.18
36 37 1.796253 CGACGTTGGATTCGAATCGGA 60.796 52.381 27.21 17.34 37.43 4.55
37 38 1.587034 GACGTTGGATTCGAATCGGAC 59.413 52.381 27.21 24.58 36.27 4.79
38 39 0.570734 CGTTGGATTCGAATCGGACG 59.429 55.000 31.65 31.65 37.73 4.79
39 40 0.928229 GTTGGATTCGAATCGGACGG 59.072 55.000 27.21 0.00 36.27 4.79
40 41 0.808453 TTGGATTCGAATCGGACGGC 60.808 55.000 27.21 15.27 36.27 5.68
41 42 1.227147 GGATTCGAATCGGACGGCA 60.227 57.895 27.21 0.00 36.27 5.69
42 43 1.215655 GGATTCGAATCGGACGGCAG 61.216 60.000 27.21 0.00 36.27 4.85
43 44 1.822250 GATTCGAATCGGACGGCAGC 61.822 60.000 21.57 0.00 0.00 5.25
44 45 4.847516 TCGAATCGGACGGCAGCG 62.848 66.667 1.76 0.00 0.00 5.18
63 64 3.309675 GATCGTGCGGATCCGTTG 58.690 61.111 33.33 22.81 44.86 4.10
64 65 2.871427 GATCGTGCGGATCCGTTGC 61.871 63.158 33.33 21.79 44.86 4.17
65 66 3.657448 ATCGTGCGGATCCGTTGCA 62.657 57.895 33.33 21.08 42.09 4.08
66 67 3.418913 CGTGCGGATCCGTTGCAA 61.419 61.111 33.33 12.95 40.83 4.08
67 68 2.950673 GTGCGGATCCGTTGCAAA 59.049 55.556 33.33 11.23 40.83 3.68
68 69 1.442017 GTGCGGATCCGTTGCAAAC 60.442 57.895 33.33 16.42 45.31 2.93
69 70 2.178273 GCGGATCCGTTGCAAACC 59.822 61.111 33.33 11.97 46.28 3.27
70 71 2.622011 GCGGATCCGTTGCAAACCA 61.622 57.895 33.33 0.00 46.28 3.67
71 72 1.209127 CGGATCCGTTGCAAACCAC 59.791 57.895 26.35 0.00 46.28 4.16
72 73 1.584495 GGATCCGTTGCAAACCACC 59.416 57.895 0.00 0.00 46.28 4.61
73 74 1.175983 GGATCCGTTGCAAACCACCA 61.176 55.000 0.00 0.00 46.28 4.17
74 75 0.240945 GATCCGTTGCAAACCACCAG 59.759 55.000 0.00 0.00 46.28 4.00
75 76 1.805428 ATCCGTTGCAAACCACCAGC 61.805 55.000 0.00 0.00 46.28 4.85
76 77 2.027460 CGTTGCAAACCACCAGCC 59.973 61.111 0.00 0.00 46.28 4.85
77 78 2.027460 GTTGCAAACCACCAGCCG 59.973 61.111 0.00 0.00 42.21 5.52
78 79 3.222855 TTGCAAACCACCAGCCGG 61.223 61.111 0.00 0.00 38.77 6.13
81 82 3.673484 CAAACCACCAGCCGGCAG 61.673 66.667 31.54 22.32 34.57 4.85
82 83 4.974721 AAACCACCAGCCGGCAGG 62.975 66.667 34.18 34.18 41.62 4.85
85 86 4.431131 CCACCAGCCGGCAGGATT 62.431 66.667 41.05 19.94 41.02 3.01
86 87 2.361610 CACCAGCCGGCAGGATTT 60.362 61.111 41.05 19.15 41.02 2.17
87 88 1.978617 CACCAGCCGGCAGGATTTT 60.979 57.895 41.05 18.76 41.02 1.82
88 89 0.679640 CACCAGCCGGCAGGATTTTA 60.680 55.000 41.05 0.00 41.02 1.52
89 90 0.394352 ACCAGCCGGCAGGATTTTAG 60.394 55.000 41.05 15.62 41.02 1.85
90 91 1.728490 CCAGCCGGCAGGATTTTAGC 61.728 60.000 32.92 0.00 41.02 3.09
91 92 0.749454 CAGCCGGCAGGATTTTAGCT 60.749 55.000 31.54 0.00 41.02 3.32
92 93 0.034089 AGCCGGCAGGATTTTAGCTT 60.034 50.000 31.54 0.00 41.02 3.74
93 94 0.817654 GCCGGCAGGATTTTAGCTTT 59.182 50.000 24.80 0.00 41.02 3.51
94 95 1.469767 GCCGGCAGGATTTTAGCTTTG 60.470 52.381 24.80 0.00 41.02 2.77
95 96 1.818674 CCGGCAGGATTTTAGCTTTGT 59.181 47.619 0.00 0.00 41.02 2.83
96 97 2.159379 CCGGCAGGATTTTAGCTTTGTC 60.159 50.000 0.00 0.00 41.02 3.18
97 98 2.476185 CGGCAGGATTTTAGCTTTGTCG 60.476 50.000 0.00 0.00 0.00 4.35
125 126 6.371271 AGAAAAACCAATGAAAACCAACACAG 59.629 34.615 0.00 0.00 0.00 3.66
170 171 3.426525 GGAGAAAAATGCACGAAAGCTTG 59.573 43.478 0.00 0.00 34.99 4.01
269 270 8.616076 CGGATCTTTAATATTGCACTCTTTTCT 58.384 33.333 0.00 0.00 0.00 2.52
312 313 8.902540 AAATGGTTTCTTATGGAAGGTTTTTC 57.097 30.769 0.00 0.00 35.16 2.29
386 387 4.243793 TCCACTGAGTTTTTGGAAGGAA 57.756 40.909 0.00 0.00 36.45 3.36
401 402 8.785329 TTTGGAAGGAATTTTTAATGGCATAC 57.215 30.769 0.00 0.00 0.00 2.39
456 473 6.347483 GGTTTTTGGAGAAGACTAATCGTGAC 60.347 42.308 0.00 0.00 0.00 3.67
459 497 3.754850 TGGAGAAGACTAATCGTGACGAA 59.245 43.478 13.14 0.00 39.99 3.85
470 508 5.763444 AATCGTGACGAAGATGTTTACAG 57.237 39.130 13.14 0.00 39.99 2.74
490 529 8.862325 TTACAGGAAAAATTGAAGCAGAGATA 57.138 30.769 0.00 0.00 0.00 1.98
499 538 3.303938 TGAAGCAGAGATAAGGAGGAGG 58.696 50.000 0.00 0.00 0.00 4.30
508 547 4.757692 AGATAAGGAGGAGGGTTAGGATG 58.242 47.826 0.00 0.00 0.00 3.51
593 925 6.404184 CCAAACGATTGCATCCTAATGTAACA 60.404 38.462 0.00 0.00 39.79 2.41
618 950 1.576356 GTCGTTCAGATCATGCCTCC 58.424 55.000 0.00 0.00 0.00 4.30
633 965 4.595538 TCCCGTGAACGTTGCGCT 62.596 61.111 5.00 0.00 37.74 5.92
687 1024 4.383948 CCTGTACATCATCGACATCAATCG 59.616 45.833 0.00 0.00 43.63 3.34
688 1025 4.932146 TGTACATCATCGACATCAATCGT 58.068 39.130 0.00 0.00 42.80 3.73
715 1094 6.831769 GTGAATCGTTACTGTTCATTCACAT 58.168 36.000 18.77 0.00 46.70 3.21
728 1107 8.219546 TGTTCATTCACATAGTTTCTTCACAA 57.780 30.769 0.00 0.00 0.00 3.33
749 1128 6.363088 CACAATTTTCTCACGTTGCAACATAT 59.637 34.615 28.01 11.00 0.00 1.78
754 1136 5.017294 TCTCACGTTGCAACATATGGATA 57.983 39.130 28.01 8.28 0.00 2.59
780 1162 5.769484 TTTTTAAACTATTGCGACCCACA 57.231 34.783 0.00 0.00 0.00 4.17
826 1209 2.347731 AGAGGATTCGCGAAGAAAACC 58.652 47.619 27.20 21.35 42.91 3.27
870 1253 2.104253 GTGGGCCCGTGTGAATACG 61.104 63.158 19.37 0.00 43.35 3.06
908 1291 2.522193 GGTGGGTCCGGCCAAAAA 60.522 61.111 15.49 0.00 39.65 1.94
910 1293 1.830847 GTGGGTCCGGCCAAAAACT 60.831 57.895 15.49 0.00 39.65 2.66
911 1294 1.075896 TGGGTCCGGCCAAAAACTT 60.076 52.632 15.49 0.00 39.65 2.66
912 1295 0.185416 TGGGTCCGGCCAAAAACTTA 59.815 50.000 15.49 0.00 39.65 2.24
913 1296 0.885879 GGGTCCGGCCAAAAACTTAG 59.114 55.000 15.49 0.00 39.65 2.18
914 1297 0.242825 GGTCCGGCCAAAAACTTAGC 59.757 55.000 2.24 0.00 37.17 3.09
915 1298 0.242825 GTCCGGCCAAAAACTTAGCC 59.757 55.000 2.24 0.00 42.18 3.93
918 1301 2.347630 GGCCAAAAACTTAGCCGGT 58.652 52.632 1.90 0.00 35.30 5.28
920 1303 0.109919 GCCAAAAACTTAGCCGGTCG 60.110 55.000 1.90 0.00 0.00 4.79
923 1306 2.486592 CCAAAAACTTAGCCGGTCGAAT 59.513 45.455 1.90 0.00 0.00 3.34
925 1308 3.824414 AAAACTTAGCCGGTCGAATTG 57.176 42.857 1.90 0.00 0.00 2.32
926 1309 1.084289 AACTTAGCCGGTCGAATTGC 58.916 50.000 1.90 0.00 0.00 3.56
927 1310 0.743345 ACTTAGCCGGTCGAATTGCC 60.743 55.000 1.90 0.00 0.00 4.52
928 1311 1.436983 CTTAGCCGGTCGAATTGCCC 61.437 60.000 1.90 0.00 0.00 5.36
929 1312 2.879813 TTAGCCGGTCGAATTGCCCC 62.880 60.000 1.90 0.00 0.00 5.80
931 1314 2.045340 CCGGTCGAATTGCCCCTT 60.045 61.111 0.00 0.00 0.00 3.95
932 1315 1.677633 CCGGTCGAATTGCCCCTTT 60.678 57.895 0.00 0.00 0.00 3.11
934 1317 0.676782 CGGTCGAATTGCCCCTTTCT 60.677 55.000 0.00 0.00 0.00 2.52
935 1318 1.545841 GGTCGAATTGCCCCTTTCTT 58.454 50.000 0.00 0.00 0.00 2.52
937 1320 2.094700 GGTCGAATTGCCCCTTTCTTTC 60.095 50.000 0.00 0.00 0.00 2.62
940 1323 1.204704 GAATTGCCCCTTTCTTTCCCG 59.795 52.381 0.00 0.00 0.00 5.14
941 1324 0.114364 ATTGCCCCTTTCTTTCCCGT 59.886 50.000 0.00 0.00 0.00 5.28
942 1325 0.538746 TTGCCCCTTTCTTTCCCGTC 60.539 55.000 0.00 0.00 0.00 4.79
943 1326 1.677966 GCCCCTTTCTTTCCCGTCC 60.678 63.158 0.00 0.00 0.00 4.79
985 1368 0.250166 CGGCCTCTTTATAACCCCCG 60.250 60.000 0.00 0.00 0.00 5.73
1002 1385 3.006677 GCCACCTAATCCTGCCCA 58.993 61.111 0.00 0.00 0.00 5.36
1014 1397 1.607178 CTGCCCATCCACCAAAGCA 60.607 57.895 0.00 0.00 0.00 3.91
1074 1562 2.573869 CCTCTGCCGCTCTCGAAA 59.426 61.111 0.00 0.00 38.10 3.46
1137 1652 2.342648 GTACGCGATCCATCCCCC 59.657 66.667 15.93 0.00 0.00 5.40
1138 1653 2.200370 TACGCGATCCATCCCCCT 59.800 61.111 15.93 0.00 0.00 4.79
1139 1654 1.906824 TACGCGATCCATCCCCCTC 60.907 63.158 15.93 0.00 0.00 4.30
1140 1655 4.008933 CGCGATCCATCCCCCTCC 62.009 72.222 0.00 0.00 0.00 4.30
1141 1656 2.527875 GCGATCCATCCCCCTCCT 60.528 66.667 0.00 0.00 0.00 3.69
1142 1657 2.150051 GCGATCCATCCCCCTCCTT 61.150 63.158 0.00 0.00 0.00 3.36
1143 1658 2.062070 CGATCCATCCCCCTCCTTC 58.938 63.158 0.00 0.00 0.00 3.46
1144 1659 0.472734 CGATCCATCCCCCTCCTTCT 60.473 60.000 0.00 0.00 0.00 2.85
1145 1660 1.826447 GATCCATCCCCCTCCTTCTT 58.174 55.000 0.00 0.00 0.00 2.52
1146 1661 1.702401 GATCCATCCCCCTCCTTCTTC 59.298 57.143 0.00 0.00 0.00 2.87
1147 1662 0.327576 TCCATCCCCCTCCTTCTTCC 60.328 60.000 0.00 0.00 0.00 3.46
1148 1663 1.700042 CCATCCCCCTCCTTCTTCCG 61.700 65.000 0.00 0.00 0.00 4.30
1149 1664 2.073101 ATCCCCCTCCTTCTTCCGC 61.073 63.158 0.00 0.00 0.00 5.54
1150 1665 3.798511 CCCCCTCCTTCTTCCGCC 61.799 72.222 0.00 0.00 0.00 6.13
1151 1666 2.689034 CCCCTCCTTCTTCCGCCT 60.689 66.667 0.00 0.00 0.00 5.52
1152 1667 2.736826 CCCCTCCTTCTTCCGCCTC 61.737 68.421 0.00 0.00 0.00 4.70
1153 1668 1.687493 CCCTCCTTCTTCCGCCTCT 60.687 63.158 0.00 0.00 0.00 3.69
1154 1669 1.681486 CCCTCCTTCTTCCGCCTCTC 61.681 65.000 0.00 0.00 0.00 3.20
1155 1670 1.681486 CCTCCTTCTTCCGCCTCTCC 61.681 65.000 0.00 0.00 0.00 3.71
1156 1671 0.686112 CTCCTTCTTCCGCCTCTCCT 60.686 60.000 0.00 0.00 0.00 3.69
1157 1672 0.684805 TCCTTCTTCCGCCTCTCCTC 60.685 60.000 0.00 0.00 0.00 3.71
1158 1673 1.681486 CCTTCTTCCGCCTCTCCTCC 61.681 65.000 0.00 0.00 0.00 4.30
1159 1674 1.681486 CTTCTTCCGCCTCTCCTCCC 61.681 65.000 0.00 0.00 0.00 4.30
1177 1692 1.636570 CCTCGCTCGTCGTTCTCTCA 61.637 60.000 0.00 0.00 39.67 3.27
1182 1697 2.968006 CGCTCGTCGTTCTCTCAATATC 59.032 50.000 0.00 0.00 0.00 1.63
1184 1699 4.602995 GCTCGTCGTTCTCTCAATATCTT 58.397 43.478 0.00 0.00 0.00 2.40
1218 1738 0.098200 TCTCGCGTGTAGATCCGTTG 59.902 55.000 5.77 0.00 0.00 4.10
1289 1838 1.672881 GTAGTGTATGCCGTCCGTACT 59.327 52.381 0.00 0.00 36.95 2.73
1377 1939 7.265673 CCTGTTAGATCGAGTTCTTTGGATTA 58.734 38.462 0.00 0.00 0.00 1.75
1470 2061 5.991933 ATGGATGATGATACTAGCGTTCT 57.008 39.130 0.00 0.00 0.00 3.01
1483 2074 5.618561 ACTAGCGTTCTTTCTTATTTTGCG 58.381 37.500 0.00 0.00 0.00 4.85
1494 2087 9.659830 TCTTTCTTATTTTGCGAGTACTTTTTC 57.340 29.630 0.00 0.00 0.00 2.29
1539 2132 5.059161 TGCTCCATCTGTACATAATTCTGC 58.941 41.667 0.00 0.00 0.00 4.26
1607 2210 9.149225 GATTGCACCTGTAAATCTAGATCTATG 57.851 37.037 5.51 0.00 0.00 2.23
1609 2212 8.023021 TGCACCTGTAAATCTAGATCTATGTT 57.977 34.615 5.51 0.00 0.00 2.71
1668 2273 6.992123 TGTGCTTATATAGTTGCAAGCTGTAT 59.008 34.615 0.00 10.71 43.00 2.29
1686 3194 0.541296 ATTGGTTTGCTCTGCTGCCT 60.541 50.000 0.00 0.00 0.00 4.75
1780 3288 8.044060 TGTCAGAATTTCATAATCACTTGTCC 57.956 34.615 0.00 0.00 0.00 4.02
1781 3289 7.148423 TGTCAGAATTTCATAATCACTTGTCCG 60.148 37.037 0.00 0.00 0.00 4.79
1782 3290 7.064609 GTCAGAATTTCATAATCACTTGTCCGA 59.935 37.037 0.00 0.00 0.00 4.55
1783 3291 7.606073 TCAGAATTTCATAATCACTTGTCCGAA 59.394 33.333 0.00 0.00 0.00 4.30
1784 3292 8.400947 CAGAATTTCATAATCACTTGTCCGAAT 58.599 33.333 0.00 0.00 0.00 3.34
1785 3293 8.960591 AGAATTTCATAATCACTTGTCCGAATT 58.039 29.630 0.00 0.00 0.00 2.17
1789 3297 7.728847 TCATAATCACTTGTCCGAATTATGG 57.271 36.000 11.42 0.00 33.66 2.74
1790 3298 7.279615 TCATAATCACTTGTCCGAATTATGGT 58.720 34.615 11.42 0.00 33.66 3.55
1791 3299 8.425703 TCATAATCACTTGTCCGAATTATGGTA 58.574 33.333 11.42 0.00 33.66 3.25
1792 3300 8.712363 CATAATCACTTGTCCGAATTATGGTAG 58.288 37.037 0.00 0.00 30.92 3.18
1793 3301 5.670792 TCACTTGTCCGAATTATGGTAGT 57.329 39.130 0.00 0.00 0.00 2.73
1794 3302 6.045072 TCACTTGTCCGAATTATGGTAGTT 57.955 37.500 0.00 0.00 0.00 2.24
1795 3303 7.172868 TCACTTGTCCGAATTATGGTAGTTA 57.827 36.000 0.00 0.00 0.00 2.24
1796 3304 7.262772 TCACTTGTCCGAATTATGGTAGTTAG 58.737 38.462 0.00 0.00 0.00 2.34
1797 3305 7.039882 CACTTGTCCGAATTATGGTAGTTAGT 58.960 38.462 0.00 0.00 0.00 2.24
1798 3306 7.548075 CACTTGTCCGAATTATGGTAGTTAGTT 59.452 37.037 0.00 0.00 0.00 2.24
1799 3307 8.098912 ACTTGTCCGAATTATGGTAGTTAGTTT 58.901 33.333 0.00 0.00 0.00 2.66
1800 3308 7.837202 TGTCCGAATTATGGTAGTTAGTTTG 57.163 36.000 0.00 0.00 0.00 2.93
1801 3309 7.388437 TGTCCGAATTATGGTAGTTAGTTTGT 58.612 34.615 0.00 0.00 0.00 2.83
1802 3310 7.879160 TGTCCGAATTATGGTAGTTAGTTTGTT 59.121 33.333 0.00 0.00 0.00 2.83
1803 3311 9.369904 GTCCGAATTATGGTAGTTAGTTTGTTA 57.630 33.333 0.00 0.00 0.00 2.41
1804 3312 9.941325 TCCGAATTATGGTAGTTAGTTTGTTAA 57.059 29.630 0.00 0.00 0.00 2.01
1806 3314 9.698617 CGAATTATGGTAGTTAGTTTGTTAAGC 57.301 33.333 0.00 0.00 0.00 3.09
1813 3321 9.727859 TGGTAGTTAGTTTGTTAAGCAATATCA 57.272 29.630 0.00 0.00 36.89 2.15
1818 3326 8.798153 GTTAGTTTGTTAAGCAATATCATGTGC 58.202 33.333 0.00 0.00 41.22 4.57
1834 3342 7.902387 ATCATGTGCTTATATAGTCAAGCTG 57.098 36.000 14.21 7.49 45.89 4.24
1835 3343 6.820335 TCATGTGCTTATATAGTCAAGCTGT 58.180 36.000 14.21 2.64 45.89 4.40
1836 3344 7.951591 TCATGTGCTTATATAGTCAAGCTGTA 58.048 34.615 14.21 5.08 45.89 2.74
1837 3345 8.588472 TCATGTGCTTATATAGTCAAGCTGTAT 58.412 33.333 14.21 6.53 45.89 2.29
1838 3346 8.654215 CATGTGCTTATATAGTCAAGCTGTATG 58.346 37.037 14.21 11.94 45.89 2.39
1839 3347 7.951591 TGTGCTTATATAGTCAAGCTGTATGA 58.048 34.615 14.21 0.00 45.89 2.15
1840 3348 8.084684 TGTGCTTATATAGTCAAGCTGTATGAG 58.915 37.037 14.21 0.00 45.89 2.90
1841 3349 8.085296 GTGCTTATATAGTCAAGCTGTATGAGT 58.915 37.037 14.21 0.00 45.89 3.41
1842 3350 8.642432 TGCTTATATAGTCAAGCTGTATGAGTT 58.358 33.333 14.21 0.00 45.89 3.01
1843 3351 9.482627 GCTTATATAGTCAAGCTGTATGAGTTT 57.517 33.333 0.00 0.00 43.07 2.66
1850 3358 5.798132 TCAAGCTGTATGAGTTTGATCTGT 58.202 37.500 0.00 0.00 44.42 3.41
1851 3359 6.233434 TCAAGCTGTATGAGTTTGATCTGTT 58.767 36.000 0.00 0.00 44.42 3.16
1852 3360 6.148315 TCAAGCTGTATGAGTTTGATCTGTTG 59.852 38.462 0.00 0.00 44.42 3.33
1853 3361 4.394300 AGCTGTATGAGTTTGATCTGTTGC 59.606 41.667 0.00 0.00 0.00 4.17
1854 3362 4.437930 GCTGTATGAGTTTGATCTGTTGCC 60.438 45.833 0.00 0.00 0.00 4.52
1855 3363 4.650734 TGTATGAGTTTGATCTGTTGCCA 58.349 39.130 0.00 0.00 0.00 4.92
1856 3364 5.255687 TGTATGAGTTTGATCTGTTGCCAT 58.744 37.500 0.00 0.00 0.00 4.40
1857 3365 4.713824 ATGAGTTTGATCTGTTGCCATG 57.286 40.909 0.00 0.00 0.00 3.66
1858 3366 3.489355 TGAGTTTGATCTGTTGCCATGT 58.511 40.909 0.00 0.00 0.00 3.21
1859 3367 3.890756 TGAGTTTGATCTGTTGCCATGTT 59.109 39.130 0.00 0.00 0.00 2.71
1860 3368 5.069318 TGAGTTTGATCTGTTGCCATGTTA 58.931 37.500 0.00 0.00 0.00 2.41
1861 3369 5.534278 TGAGTTTGATCTGTTGCCATGTTAA 59.466 36.000 0.00 0.00 0.00 2.01
1862 3370 6.209192 TGAGTTTGATCTGTTGCCATGTTAAT 59.791 34.615 0.00 0.00 0.00 1.40
1863 3371 6.996509 AGTTTGATCTGTTGCCATGTTAATT 58.003 32.000 0.00 0.00 0.00 1.40
1864 3372 7.092716 AGTTTGATCTGTTGCCATGTTAATTC 58.907 34.615 0.00 0.00 0.00 2.17
1865 3373 6.839124 TTGATCTGTTGCCATGTTAATTCT 57.161 33.333 0.00 0.00 0.00 2.40
1866 3374 6.839124 TGATCTGTTGCCATGTTAATTCTT 57.161 33.333 0.00 0.00 0.00 2.52
1867 3375 7.230849 TGATCTGTTGCCATGTTAATTCTTT 57.769 32.000 0.00 0.00 0.00 2.52
1868 3376 7.092079 TGATCTGTTGCCATGTTAATTCTTTG 58.908 34.615 0.00 0.00 0.00 2.77
1869 3377 6.403866 TCTGTTGCCATGTTAATTCTTTGT 57.596 33.333 0.00 0.00 0.00 2.83
1870 3378 6.815089 TCTGTTGCCATGTTAATTCTTTGTT 58.185 32.000 0.00 0.00 0.00 2.83
1871 3379 6.700960 TCTGTTGCCATGTTAATTCTTTGTTG 59.299 34.615 0.00 0.00 0.00 3.33
1872 3380 5.236047 TGTTGCCATGTTAATTCTTTGTTGC 59.764 36.000 0.00 0.00 0.00 4.17
1873 3381 4.314121 TGCCATGTTAATTCTTTGTTGCC 58.686 39.130 0.00 0.00 0.00 4.52
1874 3382 3.684305 GCCATGTTAATTCTTTGTTGCCC 59.316 43.478 0.00 0.00 0.00 5.36
1875 3383 4.252878 CCATGTTAATTCTTTGTTGCCCC 58.747 43.478 0.00 0.00 0.00 5.80
1876 3384 4.020307 CCATGTTAATTCTTTGTTGCCCCT 60.020 41.667 0.00 0.00 0.00 4.79
1893 3410 4.338710 TGCCCGTGTTAGCCACCC 62.339 66.667 0.00 0.00 41.26 4.61
1921 3440 3.125146 TGTTGCGCAGATACATCTTTGAC 59.875 43.478 11.31 1.05 34.22 3.18
2156 3779 2.351276 GAGTCCACCGGCACCATT 59.649 61.111 0.00 0.00 0.00 3.16
2159 3782 3.575247 TCCACCGGCACCATTGGT 61.575 61.111 0.00 1.37 35.62 3.67
2489 4117 4.988598 AAGTGGCGTGCCGTCCTG 62.989 66.667 6.37 0.00 39.42 3.86
2501 4129 1.604378 CGTCCTGAAGATTGGCCCT 59.396 57.895 0.00 0.00 0.00 5.19
2526 4154 1.005097 AGCCATCACAGCTTTCCATCA 59.995 47.619 0.00 0.00 37.24 3.07
2594 4222 0.998928 ATGGTCTGGTGCCCATTGTA 59.001 50.000 0.00 0.00 38.28 2.41
2750 4378 0.548197 TGGTTACCCCTGGTTCCGAT 60.548 55.000 0.00 0.00 37.09 4.18
3314 4988 2.221055 GCTGCGTATCGTAAATTGGAGG 59.779 50.000 0.00 0.00 0.00 4.30
3320 4994 0.034863 TCGTAAATTGGAGGGGTGGC 60.035 55.000 0.00 0.00 0.00 5.01
3434 6912 7.370576 CGCTTAATTTTTCTTTTGTTGCTTCAC 59.629 33.333 0.00 0.00 0.00 3.18
3435 6913 8.390354 GCTTAATTTTTCTTTTGTTGCTTCACT 58.610 29.630 0.00 0.00 0.00 3.41
3438 6916 7.903995 ATTTTTCTTTTGTTGCTTCACTTGA 57.096 28.000 0.00 0.00 0.00 3.02
3439 6917 6.704512 TTTTCTTTTGTTGCTTCACTTGAC 57.295 33.333 0.00 0.00 0.00 3.18
3440 6918 5.643379 TTCTTTTGTTGCTTCACTTGACT 57.357 34.783 0.00 0.00 0.00 3.41
3441 6919 4.985413 TCTTTTGTTGCTTCACTTGACTG 58.015 39.130 0.00 0.00 0.00 3.51
3442 6920 4.699735 TCTTTTGTTGCTTCACTTGACTGA 59.300 37.500 0.00 0.00 0.00 3.41
3443 6921 4.355543 TTTGTTGCTTCACTTGACTGAC 57.644 40.909 0.00 0.00 0.00 3.51
3444 6922 1.933181 TGTTGCTTCACTTGACTGACG 59.067 47.619 0.00 0.00 0.00 4.35
3445 6923 0.937304 TTGCTTCACTTGACTGACGC 59.063 50.000 0.00 0.00 36.28 5.19
3446 6924 0.179086 TGCTTCACTTGACTGACGCA 60.179 50.000 0.00 0.00 41.65 5.24
3447 6925 0.937304 GCTTCACTTGACTGACGCAA 59.063 50.000 0.00 0.00 35.89 4.85
3448 6926 1.333258 GCTTCACTTGACTGACGCAAC 60.333 52.381 0.00 0.00 35.89 4.17
3449 6927 1.933181 CTTCACTTGACTGACGCAACA 59.067 47.619 0.00 0.00 0.00 3.33
3450 6928 2.238942 TCACTTGACTGACGCAACAT 57.761 45.000 0.00 0.00 0.00 2.71
3451 6929 2.560504 TCACTTGACTGACGCAACATT 58.439 42.857 0.00 0.00 0.00 2.71
3452 6930 2.287644 TCACTTGACTGACGCAACATTG 59.712 45.455 0.00 0.00 0.00 2.82
3471 6949 9.165014 CAACATTGCTTGATTTTTCTTTCATTG 57.835 29.630 0.00 0.00 0.00 2.82
3472 6950 7.357303 ACATTGCTTGATTTTTCTTTCATTGC 58.643 30.769 0.00 0.00 0.00 3.56
3473 6951 7.227910 ACATTGCTTGATTTTTCTTTCATTGCT 59.772 29.630 0.00 0.00 0.00 3.91
3474 6952 7.556733 TTGCTTGATTTTTCTTTCATTGCTT 57.443 28.000 0.00 0.00 0.00 3.91
3475 6953 7.181143 TGCTTGATTTTTCTTTCATTGCTTC 57.819 32.000 0.00 0.00 0.00 3.86
3476 6954 6.762187 TGCTTGATTTTTCTTTCATTGCTTCA 59.238 30.769 0.00 0.00 0.00 3.02
3477 6955 7.067728 GCTTGATTTTTCTTTCATTGCTTCAC 58.932 34.615 0.00 0.00 0.00 3.18
3478 6956 7.042254 GCTTGATTTTTCTTTCATTGCTTCACT 60.042 33.333 0.00 0.00 0.00 3.41
3479 6957 8.721019 TTGATTTTTCTTTCATTGCTTCACTT 57.279 26.923 0.00 0.00 0.00 3.16
3480 6958 8.133754 TGATTTTTCTTTCATTGCTTCACTTG 57.866 30.769 0.00 0.00 0.00 3.16
3481 6959 6.907206 TTTTTCTTTCATTGCTTCACTTGG 57.093 33.333 0.00 0.00 0.00 3.61
3482 6960 3.648339 TCTTTCATTGCTTCACTTGGC 57.352 42.857 0.00 0.00 0.00 4.52
3483 6961 3.225104 TCTTTCATTGCTTCACTTGGCT 58.775 40.909 0.00 0.00 0.00 4.75
3484 6962 3.005050 TCTTTCATTGCTTCACTTGGCTG 59.995 43.478 0.00 0.00 0.00 4.85
3485 6963 2.275134 TCATTGCTTCACTTGGCTGA 57.725 45.000 0.00 0.00 0.00 4.26
3486 6964 2.585330 TCATTGCTTCACTTGGCTGAA 58.415 42.857 0.00 0.00 0.00 3.02
3487 6965 2.555325 TCATTGCTTCACTTGGCTGAAG 59.445 45.455 9.85 9.85 46.89 3.02
3491 6969 2.412421 CTTCACTTGGCTGAAGCAAC 57.588 50.000 4.43 0.00 40.51 4.17
3492 6970 1.677576 CTTCACTTGGCTGAAGCAACA 59.322 47.619 4.43 0.00 40.51 3.33
3493 6971 1.985473 TCACTTGGCTGAAGCAACAT 58.015 45.000 4.43 0.00 44.36 2.71
3494 6972 1.881973 TCACTTGGCTGAAGCAACATC 59.118 47.619 4.43 0.00 44.36 3.06
3495 6973 1.884579 CACTTGGCTGAAGCAACATCT 59.115 47.619 4.43 0.00 44.36 2.90
3496 6974 2.095364 CACTTGGCTGAAGCAACATCTC 60.095 50.000 4.43 0.00 44.36 2.75
3497 6975 2.156917 CTTGGCTGAAGCAACATCTCA 58.843 47.619 4.43 0.00 44.36 3.27
3498 6976 1.817357 TGGCTGAAGCAACATCTCAG 58.183 50.000 4.43 0.00 44.36 3.35
3499 6977 1.072806 TGGCTGAAGCAACATCTCAGT 59.927 47.619 4.43 0.00 44.36 3.41
3500 6978 2.157738 GGCTGAAGCAACATCTCAGTT 58.842 47.619 4.43 0.00 44.36 3.16
3501 6979 2.555757 GGCTGAAGCAACATCTCAGTTT 59.444 45.455 4.43 0.00 44.36 2.66
3502 6980 3.365767 GGCTGAAGCAACATCTCAGTTTC 60.366 47.826 4.43 0.00 44.36 2.78
3503 6981 3.365767 GCTGAAGCAACATCTCAGTTTCC 60.366 47.826 0.00 0.00 41.59 3.13
3504 6982 4.070716 CTGAAGCAACATCTCAGTTTCCT 58.929 43.478 0.00 0.00 0.00 3.36
3505 6983 4.067896 TGAAGCAACATCTCAGTTTCCTC 58.932 43.478 0.00 0.00 0.00 3.71
3506 6984 4.202398 TGAAGCAACATCTCAGTTTCCTCT 60.202 41.667 0.00 0.00 0.00 3.69
3507 6985 4.363991 AGCAACATCTCAGTTTCCTCTT 57.636 40.909 0.00 0.00 0.00 2.85
3508 6986 4.070716 AGCAACATCTCAGTTTCCTCTTG 58.929 43.478 0.00 0.00 0.00 3.02
3509 6987 3.817647 GCAACATCTCAGTTTCCTCTTGT 59.182 43.478 0.00 0.00 0.00 3.16
3510 6988 4.320057 GCAACATCTCAGTTTCCTCTTGTG 60.320 45.833 0.00 0.00 0.00 3.33
3511 6989 3.406764 ACATCTCAGTTTCCTCTTGTGC 58.593 45.455 0.00 0.00 0.00 4.57
3512 6990 3.181451 ACATCTCAGTTTCCTCTTGTGCA 60.181 43.478 0.00 0.00 0.00 4.57
3513 6991 2.838736 TCTCAGTTTCCTCTTGTGCAC 58.161 47.619 10.75 10.75 0.00 4.57
3514 6992 2.435805 TCTCAGTTTCCTCTTGTGCACT 59.564 45.455 19.41 0.00 0.00 4.40
3515 6993 3.118261 TCTCAGTTTCCTCTTGTGCACTT 60.118 43.478 19.41 0.00 0.00 3.16
3516 6994 3.620488 TCAGTTTCCTCTTGTGCACTTT 58.380 40.909 19.41 0.00 0.00 2.66
3517 6995 4.016444 TCAGTTTCCTCTTGTGCACTTTT 58.984 39.130 19.41 0.00 0.00 2.27
3518 6996 4.107622 CAGTTTCCTCTTGTGCACTTTTG 58.892 43.478 19.41 5.99 0.00 2.44
3519 6997 3.763897 AGTTTCCTCTTGTGCACTTTTGT 59.236 39.130 19.41 0.00 0.00 2.83
3531 7009 3.291809 CACTTTTGTGCATGCTCATGA 57.708 42.857 22.01 11.85 44.07 3.07
3532 7010 3.644823 CACTTTTGTGCATGCTCATGAA 58.355 40.909 22.01 17.53 44.07 2.57
3533 7011 4.052608 CACTTTTGTGCATGCTCATGAAA 58.947 39.130 22.01 18.06 44.07 2.69
3534 7012 4.053295 ACTTTTGTGCATGCTCATGAAAC 58.947 39.130 22.01 9.05 41.20 2.78
3535 7013 4.202182 ACTTTTGTGCATGCTCATGAAACT 60.202 37.500 22.01 7.91 41.20 2.66
3536 7014 3.291809 TTGTGCATGCTCATGAAACTG 57.708 42.857 22.01 0.00 41.20 3.16
3537 7015 2.506444 TGTGCATGCTCATGAAACTGA 58.494 42.857 20.33 0.00 41.20 3.41
3538 7016 2.486592 TGTGCATGCTCATGAAACTGAG 59.513 45.455 20.33 0.00 44.51 3.35
3539 7017 2.745821 GTGCATGCTCATGAAACTGAGA 59.254 45.455 20.33 0.00 44.48 3.27
3540 7018 3.377485 GTGCATGCTCATGAAACTGAGAT 59.623 43.478 20.33 0.00 44.48 2.75
3541 7019 4.014406 TGCATGCTCATGAAACTGAGATT 58.986 39.130 20.33 0.00 44.48 2.40
3542 7020 4.461431 TGCATGCTCATGAAACTGAGATTT 59.539 37.500 20.33 0.00 44.48 2.17
3543 7021 5.035443 GCATGCTCATGAAACTGAGATTTC 58.965 41.667 11.37 0.00 44.48 2.17
3544 7022 5.163642 GCATGCTCATGAAACTGAGATTTCT 60.164 40.000 11.37 0.00 44.48 2.52
3545 7023 6.625300 GCATGCTCATGAAACTGAGATTTCTT 60.625 38.462 11.37 1.68 44.48 2.52
3546 7024 7.414873 GCATGCTCATGAAACTGAGATTTCTTA 60.415 37.037 11.37 0.00 44.48 2.10
3547 7025 7.606858 TGCTCATGAAACTGAGATTTCTTAG 57.393 36.000 5.31 0.00 44.48 2.18
3548 7026 7.164122 TGCTCATGAAACTGAGATTTCTTAGT 58.836 34.615 5.31 0.00 44.48 2.24
3617 7095 0.475906 ACTTGGCTGAAGCAACCTCT 59.524 50.000 4.43 0.00 44.36 3.69
3630 7108 4.133078 AGCAACCTCTCAGTTTTCTCTTG 58.867 43.478 0.00 0.00 0.00 3.02
3667 7145 5.654603 TGCTCATGAAATTGAGATTGCTT 57.345 34.783 5.67 0.00 44.88 3.91
3671 7149 7.094075 TGCTCATGAAATTGAGATTGCTTAGTT 60.094 33.333 5.67 0.00 44.88 2.24
3672 7150 7.758528 GCTCATGAAATTGAGATTGCTTAGTTT 59.241 33.333 5.67 0.00 44.88 2.66
3673 7151 9.635520 CTCATGAAATTGAGATTGCTTAGTTTT 57.364 29.630 0.00 0.00 44.88 2.43
3674 7152 9.630098 TCATGAAATTGAGATTGCTTAGTTTTC 57.370 29.630 0.00 0.00 0.00 2.29
3675 7153 9.635520 CATGAAATTGAGATTGCTTAGTTTTCT 57.364 29.630 0.00 0.00 0.00 2.52
3693 7171 8.579682 AGTTTTCTTTCATTTTATGTGAGCAC 57.420 30.769 0.00 0.00 0.00 4.40
3694 7172 8.416329 AGTTTTCTTTCATTTTATGTGAGCACT 58.584 29.630 1.99 0.00 0.00 4.40
3695 7173 8.694394 GTTTTCTTTCATTTTATGTGAGCACTC 58.306 33.333 1.99 0.00 0.00 3.51
3696 7174 7.750229 TTCTTTCATTTTATGTGAGCACTCT 57.250 32.000 1.99 0.00 0.00 3.24
3697 7175 7.750229 TCTTTCATTTTATGTGAGCACTCTT 57.250 32.000 1.99 0.00 0.00 2.85
3698 7176 8.846943 TCTTTCATTTTATGTGAGCACTCTTA 57.153 30.769 1.99 0.00 0.00 2.10
3699 7177 9.283768 TCTTTCATTTTATGTGAGCACTCTTAA 57.716 29.630 1.99 0.00 0.00 1.85
3700 7178 9.897744 CTTTCATTTTATGTGAGCACTCTTAAA 57.102 29.630 1.99 0.00 0.00 1.52
3701 7179 9.897744 TTTCATTTTATGTGAGCACTCTTAAAG 57.102 29.630 1.99 0.00 0.00 1.85
3702 7180 8.621532 TCATTTTATGTGAGCACTCTTAAAGT 57.378 30.769 1.99 0.00 39.44 2.66
3703 7181 9.066892 TCATTTTATGTGAGCACTCTTAAAGTT 57.933 29.630 1.99 0.00 35.45 2.66
3704 7182 9.683069 CATTTTATGTGAGCACTCTTAAAGTTT 57.317 29.630 1.99 0.00 35.45 2.66
3706 7184 9.730420 TTTTATGTGAGCACTCTTAAAGTTTTC 57.270 29.630 0.00 0.00 35.45 2.29
3707 7185 8.677148 TTATGTGAGCACTCTTAAAGTTTTCT 57.323 30.769 0.00 0.00 35.45 2.52
3708 7186 6.604735 TGTGAGCACTCTTAAAGTTTTCTC 57.395 37.500 0.00 0.00 35.45 2.87
3709 7187 6.349300 TGTGAGCACTCTTAAAGTTTTCTCT 58.651 36.000 0.00 0.00 35.45 3.10
3710 7188 6.823689 TGTGAGCACTCTTAAAGTTTTCTCTT 59.176 34.615 0.00 0.00 35.45 2.85
3711 7189 7.128976 GTGAGCACTCTTAAAGTTTTCTCTTG 58.871 38.462 0.00 0.00 35.45 3.02
3712 7190 6.823689 TGAGCACTCTTAAAGTTTTCTCTTGT 59.176 34.615 0.00 0.00 35.45 3.16
3713 7191 7.020914 AGCACTCTTAAAGTTTTCTCTTGTG 57.979 36.000 0.00 0.00 35.45 3.33
3714 7192 5.683302 GCACTCTTAAAGTTTTCTCTTGTGC 59.317 40.000 0.00 0.00 35.45 4.57
3715 7193 6.677920 GCACTCTTAAAGTTTTCTCTTGTGCA 60.678 38.462 17.72 0.00 39.67 4.57
3716 7194 6.688813 CACTCTTAAAGTTTTCTCTTGTGCAC 59.311 38.462 10.75 10.75 35.45 4.57
3717 7195 6.599638 ACTCTTAAAGTTTTCTCTTGTGCACT 59.400 34.615 19.41 0.00 33.03 4.40
3718 7196 7.121315 ACTCTTAAAGTTTTCTCTTGTGCACTT 59.879 33.333 19.41 1.52 33.03 3.16
3719 7197 7.826690 TCTTAAAGTTTTCTCTTGTGCACTTT 58.173 30.769 19.41 8.37 37.95 2.66
3720 7198 7.968405 TCTTAAAGTTTTCTCTTGTGCACTTTC 59.032 33.333 19.41 0.00 36.24 2.62
3721 7199 4.278678 AGTTTTCTCTTGTGCACTTTCG 57.721 40.909 19.41 4.48 0.00 3.46
3722 7200 3.689649 AGTTTTCTCTTGTGCACTTTCGT 59.310 39.130 19.41 0.00 0.00 3.85
3723 7201 3.673746 TTTCTCTTGTGCACTTTCGTG 57.326 42.857 19.41 3.79 44.07 4.35
3724 7202 2.309528 TCTCTTGTGCACTTTCGTGT 57.690 45.000 19.41 0.00 43.16 4.49
3725 7203 2.627945 TCTCTTGTGCACTTTCGTGTT 58.372 42.857 19.41 0.00 43.16 3.32
3726 7204 3.006940 TCTCTTGTGCACTTTCGTGTTT 58.993 40.909 19.41 0.00 43.16 2.83
3727 7205 3.063452 TCTCTTGTGCACTTTCGTGTTTC 59.937 43.478 19.41 0.00 43.16 2.78
3728 7206 3.006940 TCTTGTGCACTTTCGTGTTTCT 58.993 40.909 19.41 0.00 43.16 2.52
3729 7207 3.438781 TCTTGTGCACTTTCGTGTTTCTT 59.561 39.130 19.41 0.00 43.16 2.52
3730 7208 3.840890 TGTGCACTTTCGTGTTTCTTT 57.159 38.095 19.41 0.00 43.16 2.52
3731 7209 3.753842 TGTGCACTTTCGTGTTTCTTTC 58.246 40.909 19.41 0.00 43.16 2.62
3732 7210 3.189495 TGTGCACTTTCGTGTTTCTTTCA 59.811 39.130 19.41 0.00 43.16 2.69
3733 7211 4.142491 TGTGCACTTTCGTGTTTCTTTCAT 60.142 37.500 19.41 0.00 43.16 2.57
3734 7212 4.798387 GTGCACTTTCGTGTTTCTTTCATT 59.202 37.500 10.32 0.00 43.16 2.57
3735 7213 5.288472 GTGCACTTTCGTGTTTCTTTCATTT 59.712 36.000 10.32 0.00 43.16 2.32
3760 7238 1.185618 TACACGAGGCTGGAGCACTT 61.186 55.000 2.65 0.00 44.36 3.16
3776 7254 6.601613 TGGAGCACTTTTTCAGTTTTCTCTTA 59.398 34.615 0.00 0.00 30.92 2.10
3797 7275 8.092521 TCTTAAGCAGAAATCAGAACTTCAAG 57.907 34.615 0.00 0.00 0.00 3.02
3862 7340 5.435686 TTGTTCTATGCTCCTGTAACCAT 57.564 39.130 0.00 0.00 0.00 3.55
3863 7341 4.769688 TGTTCTATGCTCCTGTAACCATG 58.230 43.478 0.00 0.00 0.00 3.66
3864 7342 4.225042 TGTTCTATGCTCCTGTAACCATGT 59.775 41.667 0.00 0.00 0.00 3.21
3865 7343 4.406648 TCTATGCTCCTGTAACCATGTG 57.593 45.455 0.00 0.00 0.00 3.21
3866 7344 3.774766 TCTATGCTCCTGTAACCATGTGT 59.225 43.478 0.00 0.00 0.00 3.72
3877 7355 0.179009 ACCATGTGTTCAGCAGCACT 60.179 50.000 0.00 0.00 36.63 4.40
3924 7402 7.751047 TGCAATACTAGTTTATCTCGTCAAC 57.249 36.000 0.00 0.00 0.00 3.18
3925 7403 7.317390 TGCAATACTAGTTTATCTCGTCAACA 58.683 34.615 0.00 0.00 0.00 3.33
3926 7404 7.488150 TGCAATACTAGTTTATCTCGTCAACAG 59.512 37.037 0.00 0.00 0.00 3.16
3927 7405 7.515371 GCAATACTAGTTTATCTCGTCAACAGC 60.515 40.741 0.00 0.00 0.00 4.40
3928 7406 4.413087 ACTAGTTTATCTCGTCAACAGCG 58.587 43.478 0.00 0.00 0.00 5.18
3929 7407 1.993370 AGTTTATCTCGTCAACAGCGC 59.007 47.619 0.00 0.00 0.00 5.92
3930 7408 1.724623 GTTTATCTCGTCAACAGCGCA 59.275 47.619 11.47 0.00 0.00 6.09
3931 7409 1.629013 TTATCTCGTCAACAGCGCAG 58.371 50.000 11.47 3.33 0.00 5.18
3932 7410 0.526211 TATCTCGTCAACAGCGCAGT 59.474 50.000 11.47 4.25 0.00 4.40
3935 7413 0.710567 CTCGTCAACAGCGCAGTTAG 59.289 55.000 18.27 12.30 0.00 2.34
3936 7414 0.031585 TCGTCAACAGCGCAGTTAGT 59.968 50.000 18.27 0.60 0.00 2.24
3939 7417 2.659291 CGTCAACAGCGCAGTTAGTTTC 60.659 50.000 18.27 6.33 0.00 2.78
3940 7418 2.544267 GTCAACAGCGCAGTTAGTTTCT 59.456 45.455 18.27 0.00 0.00 2.52
3990 7469 1.835483 GCAGCAACTGACACCTGACG 61.835 60.000 0.00 0.00 32.44 4.35
3998 7477 0.108662 TGACACCTGACGCTGCTATG 60.109 55.000 0.00 0.00 0.00 2.23
4021 7500 4.885325 GTCAAACTTAAACTTCTGGGGTGA 59.115 41.667 0.00 0.00 0.00 4.02
4033 7550 3.404899 TCTGGGGTGAAATTTCGTGTAC 58.595 45.455 13.34 5.85 0.00 2.90
4077 7594 0.682532 TGCAAGGTTTCCTGTGTGCA 60.683 50.000 8.87 8.87 40.99 4.57
4078 7595 0.675633 GCAAGGTTTCCTGTGTGCAT 59.324 50.000 0.00 0.00 35.61 3.96
4100 7617 1.153647 CTGCACGGGCGATAGTTGA 60.154 57.895 4.58 0.00 45.35 3.18
4103 7620 0.101759 GCACGGGCGATAGTTGACTA 59.898 55.000 0.00 0.00 39.35 2.59
4137 7654 4.217118 CAGGTATTTGATGCTTAGGATGGC 59.783 45.833 0.00 0.00 0.00 4.40
4140 7657 3.370840 TTTGATGCTTAGGATGGCAGT 57.629 42.857 0.00 0.00 41.88 4.40
4143 7660 2.771372 TGATGCTTAGGATGGCAGTGTA 59.229 45.455 0.00 0.00 41.88 2.90
4144 7661 2.691409 TGCTTAGGATGGCAGTGTAC 57.309 50.000 0.00 0.00 34.22 2.90
4145 7662 1.905894 TGCTTAGGATGGCAGTGTACA 59.094 47.619 0.00 0.00 34.22 2.90
4147 7664 2.540515 CTTAGGATGGCAGTGTACACG 58.459 52.381 19.93 15.36 36.20 4.49
4148 7665 1.552578 TAGGATGGCAGTGTACACGT 58.447 50.000 19.93 6.27 36.20 4.49
4149 7666 0.037326 AGGATGGCAGTGTACACGTG 60.037 55.000 19.93 15.48 36.20 4.49
4150 7667 0.320421 GGATGGCAGTGTACACGTGT 60.320 55.000 26.52 26.52 36.20 4.49
4151 7668 1.508632 GATGGCAGTGTACACGTGTT 58.491 50.000 28.55 11.17 36.20 3.32
4152 7669 1.459592 GATGGCAGTGTACACGTGTTC 59.540 52.381 28.55 22.46 36.20 3.18
4153 7670 0.175989 TGGCAGTGTACACGTGTTCA 59.824 50.000 28.55 25.02 36.20 3.18
4154 7671 0.859232 GGCAGTGTACACGTGTTCAG 59.141 55.000 28.55 17.17 36.20 3.02
4155 7672 1.567504 GCAGTGTACACGTGTTCAGT 58.432 50.000 28.55 26.32 36.20 3.41
4156 7673 1.521423 GCAGTGTACACGTGTTCAGTC 59.479 52.381 28.55 16.25 36.20 3.51
4157 7674 2.804647 CAGTGTACACGTGTTCAGTCA 58.195 47.619 28.55 14.89 36.20 3.41
4158 7675 2.789339 CAGTGTACACGTGTTCAGTCAG 59.211 50.000 28.55 15.14 36.20 3.51
4159 7676 1.521423 GTGTACACGTGTTCAGTCAGC 59.479 52.381 28.55 11.52 0.00 4.26
4160 7677 1.407618 TGTACACGTGTTCAGTCAGCT 59.592 47.619 28.55 0.00 0.00 4.24
4161 7678 2.052157 GTACACGTGTTCAGTCAGCTC 58.948 52.381 28.55 1.60 0.00 4.09
4207 7724 2.529780 TTTTACTTCCGCTTGGACGA 57.470 45.000 0.00 0.00 43.03 4.20
4216 7733 3.601435 TCCGCTTGGACGATTGAATAAA 58.399 40.909 0.00 0.00 36.65 1.40
4223 7740 5.174037 TGGACGATTGAATAAAACTCCCT 57.826 39.130 0.00 0.00 0.00 4.20
4241 7758 7.379098 ACTCCCTTTCGTCTCAAATTATTTC 57.621 36.000 0.00 0.00 0.00 2.17
4273 7790 6.482641 TGTCTAGATACGTATCTGAGACAACC 59.517 42.308 37.20 26.50 42.35 3.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 4.755614 GTCGCGCTCGTCCGTTCT 62.756 66.667 5.56 0.00 36.96 3.01
9 10 3.909258 AATCCAACGTCGCGCTCGT 62.909 57.895 19.61 19.61 43.45 4.18
10 11 3.126722 GAATCCAACGTCGCGCTCG 62.127 63.158 18.47 18.47 0.00 5.03
11 12 2.695646 GAATCCAACGTCGCGCTC 59.304 61.111 5.56 0.00 0.00 5.03
12 13 3.179265 CGAATCCAACGTCGCGCT 61.179 61.111 5.56 0.00 0.00 5.92
13 14 2.020836 ATTCGAATCCAACGTCGCGC 62.021 55.000 4.39 0.00 37.19 6.86
14 15 0.044161 GATTCGAATCCAACGTCGCG 60.044 55.000 24.74 0.00 37.19 5.87
15 16 0.044161 CGATTCGAATCCAACGTCGC 60.044 55.000 27.91 5.26 37.19 5.19
16 17 0.570734 CCGATTCGAATCCAACGTCG 59.429 55.000 27.91 17.91 38.62 5.12
17 18 1.587034 GTCCGATTCGAATCCAACGTC 59.413 52.381 27.91 7.50 31.68 4.34
18 19 1.636988 GTCCGATTCGAATCCAACGT 58.363 50.000 27.91 0.00 31.68 3.99
19 20 0.570734 CGTCCGATTCGAATCCAACG 59.429 55.000 29.62 29.62 35.20 4.10
20 21 0.928229 CCGTCCGATTCGAATCCAAC 59.072 55.000 27.91 23.48 31.68 3.77
21 22 0.808453 GCCGTCCGATTCGAATCCAA 60.808 55.000 27.91 15.84 31.68 3.53
22 23 1.227147 GCCGTCCGATTCGAATCCA 60.227 57.895 27.91 14.92 31.68 3.41
23 24 1.215655 CTGCCGTCCGATTCGAATCC 61.216 60.000 27.91 15.60 31.68 3.01
24 25 1.822250 GCTGCCGTCCGATTCGAATC 61.822 60.000 25.18 25.18 0.00 2.52
25 26 1.883084 GCTGCCGTCCGATTCGAAT 60.883 57.895 11.20 11.20 0.00 3.34
26 27 2.508439 GCTGCCGTCCGATTCGAA 60.508 61.111 7.83 0.00 0.00 3.71
27 28 4.847516 CGCTGCCGTCCGATTCGA 62.848 66.667 7.83 0.00 0.00 3.71
46 47 2.871427 GCAACGGATCCGCACGATC 61.871 63.158 33.62 13.13 45.91 3.69
47 48 2.890474 GCAACGGATCCGCACGAT 60.890 61.111 33.62 11.56 44.19 3.73
48 49 3.867700 TTGCAACGGATCCGCACGA 62.868 57.895 33.62 19.36 44.19 4.35
49 50 2.960512 TTTGCAACGGATCCGCACG 61.961 57.895 33.62 22.03 44.19 5.34
50 51 1.442017 GTTTGCAACGGATCCGCAC 60.442 57.895 33.62 22.43 44.19 5.34
51 52 2.622011 GGTTTGCAACGGATCCGCA 61.622 57.895 33.62 20.73 44.19 5.69
52 53 2.178273 GGTTTGCAACGGATCCGC 59.822 61.111 33.62 18.20 44.19 5.54
53 54 1.209127 GTGGTTTGCAACGGATCCG 59.791 57.895 32.20 32.20 46.03 4.18
54 55 1.175983 TGGTGGTTTGCAACGGATCC 61.176 55.000 0.00 0.00 0.00 3.36
55 56 0.240945 CTGGTGGTTTGCAACGGATC 59.759 55.000 0.00 0.00 0.00 3.36
56 57 1.805428 GCTGGTGGTTTGCAACGGAT 61.805 55.000 0.00 0.00 0.00 4.18
57 58 2.485795 GCTGGTGGTTTGCAACGGA 61.486 57.895 0.00 0.00 0.00 4.69
58 59 2.027460 GCTGGTGGTTTGCAACGG 59.973 61.111 0.00 0.00 0.00 4.44
59 60 2.027460 GGCTGGTGGTTTGCAACG 59.973 61.111 0.00 0.00 0.00 4.10
60 61 2.027460 CGGCTGGTGGTTTGCAAC 59.973 61.111 0.00 0.00 0.00 4.17
61 62 3.222855 CCGGCTGGTGGTTTGCAA 61.223 61.111 2.29 0.00 0.00 4.08
64 65 3.673484 CTGCCGGCTGGTGGTTTG 61.673 66.667 29.70 2.49 37.67 2.93
65 66 4.974721 CCTGCCGGCTGGTGGTTT 62.975 66.667 36.90 0.00 37.67 3.27
68 69 3.944250 AAATCCTGCCGGCTGGTGG 62.944 63.158 40.85 29.15 37.67 4.61
69 70 0.679640 TAAAATCCTGCCGGCTGGTG 60.680 55.000 40.85 23.75 37.67 4.17
70 71 0.394352 CTAAAATCCTGCCGGCTGGT 60.394 55.000 40.85 29.00 37.67 4.00
71 72 1.728490 GCTAAAATCCTGCCGGCTGG 61.728 60.000 38.86 38.86 38.77 4.85
72 73 0.749454 AGCTAAAATCCTGCCGGCTG 60.749 55.000 29.70 27.29 0.00 4.85
73 74 0.034089 AAGCTAAAATCCTGCCGGCT 60.034 50.000 29.70 7.80 0.00 5.52
74 75 0.817654 AAAGCTAAAATCCTGCCGGC 59.182 50.000 22.73 22.73 0.00 6.13
75 76 1.818674 ACAAAGCTAAAATCCTGCCGG 59.181 47.619 0.00 0.00 0.00 6.13
76 77 2.476185 CGACAAAGCTAAAATCCTGCCG 60.476 50.000 0.00 0.00 0.00 5.69
77 78 2.488153 ACGACAAAGCTAAAATCCTGCC 59.512 45.455 0.00 0.00 0.00 4.85
78 79 3.831715 ACGACAAAGCTAAAATCCTGC 57.168 42.857 0.00 0.00 0.00 4.85
79 80 6.721571 TCTTACGACAAAGCTAAAATCCTG 57.278 37.500 0.00 0.00 0.00 3.86
80 81 7.739498 TTTCTTACGACAAAGCTAAAATCCT 57.261 32.000 0.00 0.00 0.00 3.24
81 82 8.688184 GTTTTTCTTACGACAAAGCTAAAATCC 58.312 33.333 0.00 0.00 30.11 3.01
82 83 8.688184 GGTTTTTCTTACGACAAAGCTAAAATC 58.312 33.333 3.56 0.00 35.52 2.17
83 84 8.192110 TGGTTTTTCTTACGACAAAGCTAAAAT 58.808 29.630 10.25 0.00 37.87 1.82
84 85 7.536855 TGGTTTTTCTTACGACAAAGCTAAAA 58.463 30.769 10.25 0.00 37.87 1.52
85 86 7.086230 TGGTTTTTCTTACGACAAAGCTAAA 57.914 32.000 10.25 0.00 37.87 1.85
86 87 6.680874 TGGTTTTTCTTACGACAAAGCTAA 57.319 33.333 10.25 0.00 37.87 3.09
87 88 6.680874 TTGGTTTTTCTTACGACAAAGCTA 57.319 33.333 10.25 2.15 37.87 3.32
88 89 5.570234 TTGGTTTTTCTTACGACAAAGCT 57.430 34.783 10.25 0.00 37.87 3.74
89 90 5.974751 TCATTGGTTTTTCTTACGACAAAGC 59.025 36.000 3.78 3.78 37.65 3.51
90 91 7.979115 TTCATTGGTTTTTCTTACGACAAAG 57.021 32.000 0.00 0.00 0.00 2.77
91 92 8.648968 GTTTTCATTGGTTTTTCTTACGACAAA 58.351 29.630 0.00 0.00 0.00 2.83
92 93 7.275999 GGTTTTCATTGGTTTTTCTTACGACAA 59.724 33.333 0.00 0.00 0.00 3.18
93 94 6.752815 GGTTTTCATTGGTTTTTCTTACGACA 59.247 34.615 0.00 0.00 0.00 4.35
94 95 6.752815 TGGTTTTCATTGGTTTTTCTTACGAC 59.247 34.615 0.00 0.00 0.00 4.34
95 96 6.864342 TGGTTTTCATTGGTTTTTCTTACGA 58.136 32.000 0.00 0.00 0.00 3.43
96 97 7.063544 TGTTGGTTTTCATTGGTTTTTCTTACG 59.936 33.333 0.00 0.00 0.00 3.18
97 98 8.172484 GTGTTGGTTTTCATTGGTTTTTCTTAC 58.828 33.333 0.00 0.00 0.00 2.34
112 113 7.807907 CCTATGTGTATTTCTGTGTTGGTTTTC 59.192 37.037 0.00 0.00 0.00 2.29
160 161 5.362263 TGGACTAGTTTTACAAGCTTTCGT 58.638 37.500 0.00 0.00 0.00 3.85
170 171 4.379652 TGACCGGTTTGGACTAGTTTTAC 58.620 43.478 9.42 0.00 42.00 2.01
312 313 7.263100 TGCTTGTATTACTATTGCCTCATTG 57.737 36.000 0.00 0.00 0.00 2.82
333 334 5.587844 GGAGAAACAGACATATCACAATGCT 59.412 40.000 0.00 0.00 0.00 3.79
430 432 5.701290 CACGATTAGTCTTCTCCAAAAACCT 59.299 40.000 0.00 0.00 0.00 3.50
442 444 5.312120 ACATCTTCGTCACGATTAGTCTT 57.688 39.130 0.00 0.00 35.23 3.01
456 473 8.795786 TTCAATTTTTCCTGTAAACATCTTCG 57.204 30.769 0.00 0.00 0.00 3.79
459 497 7.725251 TGCTTCAATTTTTCCTGTAAACATCT 58.275 30.769 0.00 0.00 0.00 2.90
470 508 7.396540 TCCTTATCTCTGCTTCAATTTTTCC 57.603 36.000 0.00 0.00 0.00 3.13
490 529 3.508952 TTCATCCTAACCCTCCTCCTT 57.491 47.619 0.00 0.00 0.00 3.36
523 852 7.849804 TCCACAAGCAGAGATTCTAATTAAC 57.150 36.000 0.00 0.00 0.00 2.01
593 925 0.452184 ATGATCTGAACGACGCGTCT 59.548 50.000 33.94 19.03 39.99 4.18
618 950 2.425124 CAAGCGCAACGTTCACGG 60.425 61.111 11.47 1.08 44.95 4.94
633 965 4.595538 AAGGGACGCGTCGCACAA 62.596 61.111 44.02 0.00 43.96 3.33
664 1001 4.383948 CGATTGATGTCGATGATGTACAGG 59.616 45.833 0.33 0.00 44.06 4.00
665 1002 4.978580 ACGATTGATGTCGATGATGTACAG 59.021 41.667 0.33 0.00 44.06 2.74
687 1024 7.950496 GTGAATGAACAGTAACGATTCACTAAC 59.050 37.037 13.39 0.00 44.87 2.34
688 1025 7.654116 TGTGAATGAACAGTAACGATTCACTAA 59.346 33.333 18.77 3.13 46.86 2.24
715 1094 7.548196 ACGTGAGAAAATTGTGAAGAAACTA 57.452 32.000 0.00 0.00 0.00 2.24
728 1107 5.182950 TCCATATGTTGCAACGTGAGAAAAT 59.817 36.000 30.15 14.31 0.00 1.82
763 1145 2.038557 AGTCTGTGGGTCGCAATAGTTT 59.961 45.455 0.00 0.00 0.00 2.66
826 1209 0.456995 GTCGAAGCCTCTCGTCCTTG 60.457 60.000 0.00 0.00 39.84 3.61
891 1274 2.522193 TTTTTGGCCGGACCCACC 60.522 61.111 3.83 0.00 37.83 4.61
893 1276 0.185416 TAAGTTTTTGGCCGGACCCA 59.815 50.000 3.83 0.00 37.83 4.51
908 1291 0.743345 GGCAATTCGACCGGCTAAGT 60.743 55.000 0.00 0.00 0.00 2.24
910 1293 1.450669 GGGCAATTCGACCGGCTAA 60.451 57.895 0.00 0.00 27.65 3.09
911 1294 2.188469 GGGCAATTCGACCGGCTA 59.812 61.111 0.00 0.00 27.65 3.93
916 1299 1.545841 AAGAAAGGGGCAATTCGACC 58.454 50.000 0.00 0.00 45.59 4.79
917 1300 2.094700 GGAAAGAAAGGGGCAATTCGAC 60.095 50.000 0.00 0.00 0.00 4.20
918 1301 2.167662 GGAAAGAAAGGGGCAATTCGA 58.832 47.619 0.00 0.00 0.00 3.71
920 1303 1.204704 CGGGAAAGAAAGGGGCAATTC 59.795 52.381 0.00 0.00 0.00 2.17
923 1306 0.538746 GACGGGAAAGAAAGGGGCAA 60.539 55.000 0.00 0.00 0.00 4.52
925 1308 1.677966 GGACGGGAAAGAAAGGGGC 60.678 63.158 0.00 0.00 0.00 5.80
926 1309 0.404426 AAGGACGGGAAAGAAAGGGG 59.596 55.000 0.00 0.00 0.00 4.79
927 1310 1.351350 AGAAGGACGGGAAAGAAAGGG 59.649 52.381 0.00 0.00 0.00 3.95
928 1311 2.861147 AGAAGGACGGGAAAGAAAGG 57.139 50.000 0.00 0.00 0.00 3.11
929 1312 3.502595 GGAAAGAAGGACGGGAAAGAAAG 59.497 47.826 0.00 0.00 0.00 2.62
931 1314 2.224695 GGGAAAGAAGGACGGGAAAGAA 60.225 50.000 0.00 0.00 0.00 2.52
932 1315 1.350019 GGGAAAGAAGGACGGGAAAGA 59.650 52.381 0.00 0.00 0.00 2.52
934 1317 0.402887 GGGGAAAGAAGGACGGGAAA 59.597 55.000 0.00 0.00 0.00 3.13
935 1318 0.475048 AGGGGAAAGAAGGACGGGAA 60.475 55.000 0.00 0.00 0.00 3.97
937 1320 1.602771 GAGGGGAAAGAAGGACGGG 59.397 63.158 0.00 0.00 0.00 5.28
940 1323 0.249676 GGACGAGGGGAAAGAAGGAC 59.750 60.000 0.00 0.00 0.00 3.85
941 1324 0.178915 TGGACGAGGGGAAAGAAGGA 60.179 55.000 0.00 0.00 0.00 3.36
942 1325 0.690762 TTGGACGAGGGGAAAGAAGG 59.309 55.000 0.00 0.00 0.00 3.46
943 1326 1.946283 GCTTGGACGAGGGGAAAGAAG 60.946 57.143 0.00 0.00 0.00 2.85
985 1368 0.538287 GATGGGCAGGATTAGGTGGC 60.538 60.000 0.00 0.00 38.49 5.01
1002 1385 1.980772 GCTGGCTGCTTTGGTGGAT 60.981 57.895 9.31 0.00 38.95 3.41
1074 1562 1.410850 ATGGTCGATGCTCGGGGAAT 61.411 55.000 5.87 0.00 40.88 3.01
1137 1652 0.686112 AGGAGAGGCGGAAGAAGGAG 60.686 60.000 0.00 0.00 0.00 3.69
1138 1653 0.684805 GAGGAGAGGCGGAAGAAGGA 60.685 60.000 0.00 0.00 0.00 3.36
1139 1654 1.681486 GGAGGAGAGGCGGAAGAAGG 61.681 65.000 0.00 0.00 0.00 3.46
1140 1655 1.681486 GGGAGGAGAGGCGGAAGAAG 61.681 65.000 0.00 0.00 0.00 2.85
1141 1656 1.686110 GGGAGGAGAGGCGGAAGAA 60.686 63.158 0.00 0.00 0.00 2.52
1142 1657 2.042843 GGGAGGAGAGGCGGAAGA 60.043 66.667 0.00 0.00 0.00 2.87
1143 1658 2.042435 AGGGAGGAGAGGCGGAAG 60.042 66.667 0.00 0.00 0.00 3.46
1144 1659 2.042843 GAGGGAGGAGAGGCGGAA 60.043 66.667 0.00 0.00 0.00 4.30
1145 1660 4.507916 CGAGGGAGGAGAGGCGGA 62.508 72.222 0.00 0.00 0.00 5.54
1148 1663 3.223589 GAGCGAGGGAGGAGAGGC 61.224 72.222 0.00 0.00 0.00 4.70
1149 1664 2.904866 CGAGCGAGGGAGGAGAGG 60.905 72.222 0.00 0.00 0.00 3.69
1150 1665 2.124487 ACGAGCGAGGGAGGAGAG 60.124 66.667 0.00 0.00 0.00 3.20
1151 1666 2.124653 GACGAGCGAGGGAGGAGA 60.125 66.667 0.00 0.00 0.00 3.71
1152 1667 3.578272 CGACGAGCGAGGGAGGAG 61.578 72.222 0.00 0.00 44.57 3.69
1153 1668 3.914579 AACGACGAGCGAGGGAGGA 62.915 63.158 0.00 0.00 44.57 3.71
1154 1669 3.398353 GAACGACGAGCGAGGGAGG 62.398 68.421 0.00 0.00 44.57 4.30
1155 1670 2.100603 GAACGACGAGCGAGGGAG 59.899 66.667 0.00 0.00 44.57 4.30
1156 1671 2.359602 AGAACGACGAGCGAGGGA 60.360 61.111 0.00 0.00 44.57 4.20
1157 1672 2.100603 GAGAACGACGAGCGAGGG 59.899 66.667 0.00 0.00 44.57 4.30
1158 1673 1.061253 GAGAGAACGACGAGCGAGG 59.939 63.158 0.00 0.00 44.57 4.63
1159 1674 0.166161 TTGAGAGAACGACGAGCGAG 59.834 55.000 0.00 0.00 44.57 5.03
1177 1692 6.294473 AGACAGATCAAATCGCCAAGATATT 58.706 36.000 0.00 0.00 38.98 1.28
1182 1697 2.283617 CGAGACAGATCAAATCGCCAAG 59.716 50.000 0.00 0.00 0.00 3.61
1184 1699 1.926561 CGAGACAGATCAAATCGCCA 58.073 50.000 0.00 0.00 0.00 5.69
1289 1838 2.390599 GCAGATCAAAGCACGGCGA 61.391 57.895 16.62 0.00 0.00 5.54
1470 2061 7.588488 CCGAAAAAGTACTCGCAAAATAAGAAA 59.412 33.333 0.00 0.00 33.70 2.52
1483 2074 6.128363 CCATCAACTTACCCGAAAAAGTACTC 60.128 42.308 0.00 0.00 34.91 2.59
1494 2087 1.470979 CGGAGTCCATCAACTTACCCG 60.471 57.143 10.49 0.00 30.79 5.28
1539 2132 5.917541 ATTACCACTACAACGAACACAAG 57.082 39.130 0.00 0.00 0.00 3.16
1576 2179 7.044181 TCTAGATTTACAGGTGCAATCTTCAG 58.956 38.462 11.61 6.74 38.12 3.02
1607 2210 4.301628 CAAAAGAAGCCACCAAGATCAAC 58.698 43.478 0.00 0.00 0.00 3.18
1609 2212 2.297033 GCAAAAGAAGCCACCAAGATCA 59.703 45.455 0.00 0.00 0.00 2.92
1614 2217 2.035832 GCTTAGCAAAAGAAGCCACCAA 59.964 45.455 0.00 0.00 41.85 3.67
1668 2273 0.756442 AAGGCAGCAGAGCAAACCAA 60.756 50.000 0.00 0.00 35.83 3.67
1686 3194 5.622346 AAGGGGCAACAAAGAATTAACAA 57.378 34.783 0.00 0.00 39.74 2.83
1763 3271 8.620416 CCATAATTCGGACAAGTGATTATGAAA 58.380 33.333 14.81 0.00 34.32 2.69
1764 3272 7.773224 ACCATAATTCGGACAAGTGATTATGAA 59.227 33.333 14.81 0.00 34.32 2.57
1765 3273 7.279615 ACCATAATTCGGACAAGTGATTATGA 58.720 34.615 14.81 0.00 34.32 2.15
1766 3274 7.496529 ACCATAATTCGGACAAGTGATTATG 57.503 36.000 9.39 9.39 33.03 1.90
1767 3275 8.429641 ACTACCATAATTCGGACAAGTGATTAT 58.570 33.333 0.93 0.00 0.00 1.28
1768 3276 7.788026 ACTACCATAATTCGGACAAGTGATTA 58.212 34.615 0.93 0.00 0.00 1.75
1769 3277 6.650120 ACTACCATAATTCGGACAAGTGATT 58.350 36.000 0.93 0.00 0.00 2.57
1770 3278 6.235231 ACTACCATAATTCGGACAAGTGAT 57.765 37.500 0.93 0.00 0.00 3.06
1771 3279 5.670792 ACTACCATAATTCGGACAAGTGA 57.329 39.130 0.93 0.00 0.00 3.41
1772 3280 7.039882 ACTAACTACCATAATTCGGACAAGTG 58.960 38.462 0.93 0.00 0.00 3.16
1773 3281 7.179076 ACTAACTACCATAATTCGGACAAGT 57.821 36.000 0.93 0.00 0.00 3.16
1774 3282 8.388103 CAAACTAACTACCATAATTCGGACAAG 58.612 37.037 0.93 0.00 0.00 3.16
1775 3283 7.879160 ACAAACTAACTACCATAATTCGGACAA 59.121 33.333 0.93 0.00 0.00 3.18
1776 3284 7.388437 ACAAACTAACTACCATAATTCGGACA 58.612 34.615 0.93 0.00 0.00 4.02
1777 3285 7.838771 ACAAACTAACTACCATAATTCGGAC 57.161 36.000 0.93 0.00 0.00 4.79
1778 3286 9.941325 TTAACAAACTAACTACCATAATTCGGA 57.059 29.630 0.93 0.00 0.00 4.55
1780 3288 9.698617 GCTTAACAAACTAACTACCATAATTCG 57.301 33.333 0.00 0.00 0.00 3.34
1787 3295 9.727859 TGATATTGCTTAACAAACTAACTACCA 57.272 29.630 0.00 0.00 42.86 3.25
1792 3300 8.798153 GCACATGATATTGCTTAACAAACTAAC 58.202 33.333 0.00 0.00 42.86 2.34
1793 3301 8.909708 GCACATGATATTGCTTAACAAACTAA 57.090 30.769 0.00 0.00 42.86 2.24
1821 3329 9.703892 GATCAAACTCATACAGCTTGACTATAT 57.296 33.333 0.00 0.00 39.51 0.86
1822 3330 8.918116 AGATCAAACTCATACAGCTTGACTATA 58.082 33.333 0.00 0.00 39.51 1.31
1823 3331 7.710044 CAGATCAAACTCATACAGCTTGACTAT 59.290 37.037 0.00 0.00 39.51 2.12
1824 3332 7.038048 CAGATCAAACTCATACAGCTTGACTA 58.962 38.462 0.00 0.00 39.51 2.59
1825 3333 5.873712 CAGATCAAACTCATACAGCTTGACT 59.126 40.000 0.00 0.00 39.51 3.41
1826 3334 5.641209 ACAGATCAAACTCATACAGCTTGAC 59.359 40.000 0.00 0.00 39.51 3.18
1827 3335 5.798132 ACAGATCAAACTCATACAGCTTGA 58.202 37.500 0.00 0.00 40.68 3.02
1828 3336 6.312487 CAACAGATCAAACTCATACAGCTTG 58.688 40.000 0.00 0.00 30.40 4.01
1829 3337 5.106396 GCAACAGATCAAACTCATACAGCTT 60.106 40.000 0.00 0.00 0.00 3.74
1830 3338 4.394300 GCAACAGATCAAACTCATACAGCT 59.606 41.667 0.00 0.00 0.00 4.24
1831 3339 4.437930 GGCAACAGATCAAACTCATACAGC 60.438 45.833 0.00 0.00 0.00 4.40
1832 3340 4.696877 TGGCAACAGATCAAACTCATACAG 59.303 41.667 0.00 0.00 46.17 2.74
1833 3341 4.650734 TGGCAACAGATCAAACTCATACA 58.349 39.130 0.00 0.00 46.17 2.29
1849 3357 5.334028 GGCAACAAAGAATTAACATGGCAAC 60.334 40.000 0.00 0.00 32.96 4.17
1850 3358 4.754114 GGCAACAAAGAATTAACATGGCAA 59.246 37.500 0.00 0.00 32.96 4.52
1851 3359 4.314121 GGCAACAAAGAATTAACATGGCA 58.686 39.130 0.00 0.00 32.96 4.92
1852 3360 3.684305 GGGCAACAAAGAATTAACATGGC 59.316 43.478 0.00 0.00 39.74 4.40
1853 3361 4.020307 AGGGGCAACAAAGAATTAACATGG 60.020 41.667 0.00 0.00 39.74 3.66
1854 3362 4.931002 CAGGGGCAACAAAGAATTAACATG 59.069 41.667 0.00 0.00 39.74 3.21
1855 3363 4.563374 GCAGGGGCAACAAAGAATTAACAT 60.563 41.667 0.00 0.00 40.72 2.71
1856 3364 3.244044 GCAGGGGCAACAAAGAATTAACA 60.244 43.478 0.00 0.00 40.72 2.41
1857 3365 3.325870 GCAGGGGCAACAAAGAATTAAC 58.674 45.455 0.00 0.00 40.72 2.01
1858 3366 2.301583 GGCAGGGGCAACAAAGAATTAA 59.698 45.455 0.00 0.00 43.71 1.40
1859 3367 1.899142 GGCAGGGGCAACAAAGAATTA 59.101 47.619 0.00 0.00 43.71 1.40
1860 3368 0.686789 GGCAGGGGCAACAAAGAATT 59.313 50.000 0.00 0.00 43.71 2.17
1861 3369 1.194121 GGGCAGGGGCAACAAAGAAT 61.194 55.000 0.00 0.00 43.71 2.40
1862 3370 1.836604 GGGCAGGGGCAACAAAGAA 60.837 57.895 0.00 0.00 43.71 2.52
1863 3371 2.203625 GGGCAGGGGCAACAAAGA 60.204 61.111 0.00 0.00 43.71 2.52
1864 3372 3.683937 CGGGCAGGGGCAACAAAG 61.684 66.667 0.00 0.00 43.71 2.77
1865 3373 4.531426 ACGGGCAGGGGCAACAAA 62.531 61.111 0.00 0.00 43.71 2.83
1868 3376 3.853698 TAACACGGGCAGGGGCAAC 62.854 63.158 0.00 0.00 43.71 4.17
1869 3377 3.561120 CTAACACGGGCAGGGGCAA 62.561 63.158 0.00 0.00 43.71 4.52
1870 3378 4.028490 CTAACACGGGCAGGGGCA 62.028 66.667 0.00 0.00 43.71 5.36
1872 3380 4.796495 GGCTAACACGGGCAGGGG 62.796 72.222 0.00 0.00 0.00 4.79
1873 3381 4.028490 TGGCTAACACGGGCAGGG 62.028 66.667 0.00 0.00 35.13 4.45
1874 3382 2.746277 GTGGCTAACACGGGCAGG 60.746 66.667 0.00 0.00 40.85 4.85
1893 3410 0.095935 GTATCTGCGCAACAGCACAG 59.904 55.000 13.05 0.00 46.76 3.66
2156 3779 2.625823 GCTGGCAAAGCGCTTACCA 61.626 57.895 31.57 31.57 43.45 3.25
2283 3906 0.400213 CCCTTGGTGCTCTGGTACAA 59.600 55.000 0.00 0.00 38.70 2.41
2489 4117 0.533085 GCTCGGTAGGGCCAATCTTC 60.533 60.000 6.18 0.00 38.09 2.87
2501 4129 0.613260 AAAGCTGTGATGGCTCGGTA 59.387 50.000 0.00 0.00 39.30 4.02
2526 4154 1.004044 CAGACCCTGAGCATTCTGGTT 59.996 52.381 0.00 0.00 39.96 3.67
2594 4222 2.544721 TCAACAAGGATCTCAGGCTCT 58.455 47.619 0.00 0.00 0.00 4.09
2750 4378 3.087065 GGGGCTACCTTCTTGGCA 58.913 61.111 0.00 0.00 40.22 4.92
2822 4450 0.038166 GGAAGACAATGGCAGGGACA 59.962 55.000 0.00 0.00 0.00 4.02
3314 4988 2.492088 GACCATAGAACAAAAGCCACCC 59.508 50.000 0.00 0.00 0.00 4.61
3320 4994 8.901748 CAAAATTACACGACCATAGAACAAAAG 58.098 33.333 0.00 0.00 0.00 2.27
3394 6872 4.700268 ATTAAGCGATGCAACACAATCA 57.300 36.364 0.00 0.00 0.00 2.57
3434 6912 1.678360 GCAATGTTGCGTCAGTCAAG 58.322 50.000 1.53 0.00 45.11 3.02
3435 6913 3.843632 GCAATGTTGCGTCAGTCAA 57.156 47.368 1.53 0.00 45.11 3.18
3445 6923 9.165014 CAATGAAAGAAAAATCAAGCAATGTTG 57.835 29.630 0.00 0.00 0.00 3.33
3446 6924 7.858879 GCAATGAAAGAAAAATCAAGCAATGTT 59.141 29.630 0.00 0.00 33.50 2.71
3447 6925 7.227910 AGCAATGAAAGAAAAATCAAGCAATGT 59.772 29.630 0.00 0.00 34.83 2.71
3448 6926 7.581476 AGCAATGAAAGAAAAATCAAGCAATG 58.419 30.769 0.00 0.00 34.83 2.82
3449 6927 7.739498 AGCAATGAAAGAAAAATCAAGCAAT 57.261 28.000 0.00 0.00 34.83 3.56
3450 6928 7.280428 TGAAGCAATGAAAGAAAAATCAAGCAA 59.720 29.630 0.00 0.00 34.83 3.91
3451 6929 6.762187 TGAAGCAATGAAAGAAAAATCAAGCA 59.238 30.769 0.00 0.00 34.83 3.91
3452 6930 7.042254 AGTGAAGCAATGAAAGAAAAATCAAGC 60.042 33.333 0.00 0.00 33.48 4.01
3453 6931 8.361592 AGTGAAGCAATGAAAGAAAAATCAAG 57.638 30.769 0.00 0.00 0.00 3.02
3454 6932 8.605746 CAAGTGAAGCAATGAAAGAAAAATCAA 58.394 29.630 0.00 0.00 0.00 2.57
3455 6933 7.225145 CCAAGTGAAGCAATGAAAGAAAAATCA 59.775 33.333 0.00 0.00 0.00 2.57
3456 6934 7.570161 CCAAGTGAAGCAATGAAAGAAAAATC 58.430 34.615 0.00 0.00 0.00 2.17
3457 6935 6.017687 GCCAAGTGAAGCAATGAAAGAAAAAT 60.018 34.615 0.00 0.00 0.00 1.82
3458 6936 5.294060 GCCAAGTGAAGCAATGAAAGAAAAA 59.706 36.000 0.00 0.00 0.00 1.94
3459 6937 4.810491 GCCAAGTGAAGCAATGAAAGAAAA 59.190 37.500 0.00 0.00 0.00 2.29
3460 6938 4.099881 AGCCAAGTGAAGCAATGAAAGAAA 59.900 37.500 0.00 0.00 0.00 2.52
3461 6939 3.638160 AGCCAAGTGAAGCAATGAAAGAA 59.362 39.130 0.00 0.00 0.00 2.52
3462 6940 3.005050 CAGCCAAGTGAAGCAATGAAAGA 59.995 43.478 0.00 0.00 0.00 2.52
3463 6941 3.005050 TCAGCCAAGTGAAGCAATGAAAG 59.995 43.478 0.00 0.00 0.00 2.62
3464 6942 2.957680 TCAGCCAAGTGAAGCAATGAAA 59.042 40.909 0.00 0.00 0.00 2.69
3465 6943 2.585330 TCAGCCAAGTGAAGCAATGAA 58.415 42.857 0.00 0.00 0.00 2.57
3466 6944 2.275134 TCAGCCAAGTGAAGCAATGA 57.725 45.000 0.00 0.00 0.00 2.57
3467 6945 2.942710 CTTCAGCCAAGTGAAGCAATG 58.057 47.619 0.99 0.00 45.22 2.82
3473 6951 1.761449 TGTTGCTTCAGCCAAGTGAA 58.239 45.000 0.00 0.00 41.18 3.18
3474 6952 1.881973 GATGTTGCTTCAGCCAAGTGA 59.118 47.619 0.00 0.00 41.18 3.41
3475 6953 1.884579 AGATGTTGCTTCAGCCAAGTG 59.115 47.619 0.00 0.00 41.18 3.16
3476 6954 2.157738 GAGATGTTGCTTCAGCCAAGT 58.842 47.619 0.00 0.00 41.18 3.16
3477 6955 2.156917 TGAGATGTTGCTTCAGCCAAG 58.843 47.619 0.00 0.00 41.18 3.61
3478 6956 2.156917 CTGAGATGTTGCTTCAGCCAA 58.843 47.619 0.00 0.00 41.18 4.52
3479 6957 1.072806 ACTGAGATGTTGCTTCAGCCA 59.927 47.619 0.00 0.00 41.18 4.75
3480 6958 1.818642 ACTGAGATGTTGCTTCAGCC 58.181 50.000 0.00 0.00 41.18 4.85
3481 6959 3.365767 GGAAACTGAGATGTTGCTTCAGC 60.366 47.826 0.94 0.00 42.50 4.26
3482 6960 4.070716 AGGAAACTGAGATGTTGCTTCAG 58.929 43.478 0.00 0.00 41.13 3.02
3483 6961 4.067896 GAGGAAACTGAGATGTTGCTTCA 58.932 43.478 0.00 0.00 44.43 3.02
3484 6962 4.322567 AGAGGAAACTGAGATGTTGCTTC 58.677 43.478 0.00 0.00 44.43 3.86
3485 6963 4.363991 AGAGGAAACTGAGATGTTGCTT 57.636 40.909 0.00 0.00 44.43 3.91
3486 6964 4.070716 CAAGAGGAAACTGAGATGTTGCT 58.929 43.478 0.00 0.00 44.43 3.91
3487 6965 3.817647 ACAAGAGGAAACTGAGATGTTGC 59.182 43.478 0.00 0.00 44.43 4.17
3488 6966 4.320057 GCACAAGAGGAAACTGAGATGTTG 60.320 45.833 0.00 0.00 44.43 3.33
3489 6967 3.817647 GCACAAGAGGAAACTGAGATGTT 59.182 43.478 0.00 0.00 44.43 2.71
3490 6968 3.181451 TGCACAAGAGGAAACTGAGATGT 60.181 43.478 0.00 0.00 44.43 3.06
3491 6969 3.188048 GTGCACAAGAGGAAACTGAGATG 59.812 47.826 13.17 0.00 44.43 2.90
3492 6970 3.072184 AGTGCACAAGAGGAAACTGAGAT 59.928 43.478 21.04 0.00 44.43 2.75
3493 6971 2.435805 AGTGCACAAGAGGAAACTGAGA 59.564 45.455 21.04 0.00 44.43 3.27
3494 6972 2.843701 AGTGCACAAGAGGAAACTGAG 58.156 47.619 21.04 0.00 44.43 3.35
3495 6973 3.281727 AAGTGCACAAGAGGAAACTGA 57.718 42.857 21.04 0.00 44.43 3.41
3496 6974 4.107622 CAAAAGTGCACAAGAGGAAACTG 58.892 43.478 21.04 0.00 44.43 3.16
3498 6976 3.859386 CACAAAAGTGCACAAGAGGAAAC 59.141 43.478 21.04 0.00 0.00 2.78
3499 6977 4.108699 CACAAAAGTGCACAAGAGGAAA 57.891 40.909 21.04 0.00 0.00 3.13
3500 6978 3.781079 CACAAAAGTGCACAAGAGGAA 57.219 42.857 21.04 0.00 0.00 3.36
3511 6989 3.291809 TCATGAGCATGCACAAAAGTG 57.708 42.857 21.69 14.85 38.65 3.16
3512 6990 4.053295 GTTTCATGAGCATGCACAAAAGT 58.947 39.130 21.69 2.37 38.65 2.66
3513 6991 4.149922 CAGTTTCATGAGCATGCACAAAAG 59.850 41.667 21.69 14.14 38.65 2.27
3514 6992 4.052608 CAGTTTCATGAGCATGCACAAAA 58.947 39.130 21.69 15.08 38.65 2.44
3515 6993 3.318557 TCAGTTTCATGAGCATGCACAAA 59.681 39.130 21.69 9.84 38.65 2.83
3516 6994 2.885894 TCAGTTTCATGAGCATGCACAA 59.114 40.909 21.69 3.54 38.65 3.33
3517 6995 2.486592 CTCAGTTTCATGAGCATGCACA 59.513 45.455 20.21 20.21 40.26 4.57
3518 6996 2.745821 TCTCAGTTTCATGAGCATGCAC 59.254 45.455 21.98 15.08 45.25 4.57
3519 6997 3.062122 TCTCAGTTTCATGAGCATGCA 57.938 42.857 21.98 0.00 45.25 3.96
3520 6998 4.634184 AATCTCAGTTTCATGAGCATGC 57.366 40.909 10.51 10.51 45.25 4.06
3521 6999 6.438259 AGAAATCTCAGTTTCATGAGCATG 57.562 37.500 4.10 4.10 45.25 4.06
3522 7000 7.828223 ACTAAGAAATCTCAGTTTCATGAGCAT 59.172 33.333 0.00 0.00 45.25 3.79
3523 7001 7.164122 ACTAAGAAATCTCAGTTTCATGAGCA 58.836 34.615 0.00 0.00 45.25 4.26
3524 7002 7.608308 ACTAAGAAATCTCAGTTTCATGAGC 57.392 36.000 0.00 0.00 45.25 4.26
3541 7019 9.301153 GCTTCACAAATGAAAGAAAACTAAGAA 57.699 29.630 0.00 0.00 44.28 2.52
3542 7020 8.465999 TGCTTCACAAATGAAAGAAAACTAAGA 58.534 29.630 0.00 0.00 44.28 2.10
3543 7021 8.633075 TGCTTCACAAATGAAAGAAAACTAAG 57.367 30.769 5.07 0.00 44.28 2.18
3544 7022 8.868916 GTTGCTTCACAAATGAAAGAAAACTAA 58.131 29.630 5.07 0.00 44.28 2.24
3545 7023 8.031864 TGTTGCTTCACAAATGAAAGAAAACTA 58.968 29.630 5.07 0.00 44.28 2.24
3546 7024 6.873076 TGTTGCTTCACAAATGAAAGAAAACT 59.127 30.769 5.07 0.00 44.28 2.66
3547 7025 7.059448 TGTTGCTTCACAAATGAAAGAAAAC 57.941 32.000 5.07 7.69 44.28 2.43
3548 7026 7.254050 CGATGTTGCTTCACAAATGAAAGAAAA 60.254 33.333 5.07 0.00 44.28 2.29
3549 7027 6.198778 CGATGTTGCTTCACAAATGAAAGAAA 59.801 34.615 5.07 0.00 44.28 2.52
3550 7028 5.686841 CGATGTTGCTTCACAAATGAAAGAA 59.313 36.000 5.07 0.00 44.28 2.52
3551 7029 5.214417 CGATGTTGCTTCACAAATGAAAGA 58.786 37.500 5.07 0.00 44.28 2.52
3552 7030 4.143473 GCGATGTTGCTTCACAAATGAAAG 60.143 41.667 0.00 0.00 44.28 2.62
3553 7031 3.735240 GCGATGTTGCTTCACAAATGAAA 59.265 39.130 0.00 0.00 44.28 2.69
3554 7032 3.004629 AGCGATGTTGCTTCACAAATGAA 59.995 39.130 0.00 0.00 44.46 2.57
3555 7033 2.553602 AGCGATGTTGCTTCACAAATGA 59.446 40.909 0.00 0.00 44.46 2.57
3556 7034 2.937591 AGCGATGTTGCTTCACAAATG 58.062 42.857 0.00 0.00 44.46 2.32
3583 7061 4.036734 CAGCCAAGTGAAGCAACTAAAGAA 59.963 41.667 0.00 0.00 0.00 2.52
3584 7062 3.565482 CAGCCAAGTGAAGCAACTAAAGA 59.435 43.478 0.00 0.00 0.00 2.52
3585 7063 3.565482 TCAGCCAAGTGAAGCAACTAAAG 59.435 43.478 0.00 0.00 0.00 1.85
3586 7064 3.550820 TCAGCCAAGTGAAGCAACTAAA 58.449 40.909 0.00 0.00 0.00 1.85
3589 7067 1.952296 CTTCAGCCAAGTGAAGCAACT 59.048 47.619 0.99 0.00 45.22 3.16
3617 7095 4.201812 CGAAAGTGCACAAGAGAAAACTGA 60.202 41.667 21.04 0.00 0.00 3.41
3667 7145 9.677567 GTGCTCACATAAAATGAAAGAAAACTA 57.322 29.630 0.00 0.00 0.00 2.24
3671 7149 8.169977 AGAGTGCTCACATAAAATGAAAGAAA 57.830 30.769 2.63 0.00 0.00 2.52
3672 7150 7.750229 AGAGTGCTCACATAAAATGAAAGAA 57.250 32.000 2.63 0.00 0.00 2.52
3673 7151 7.750229 AAGAGTGCTCACATAAAATGAAAGA 57.250 32.000 2.63 0.00 0.00 2.52
3674 7152 9.897744 TTTAAGAGTGCTCACATAAAATGAAAG 57.102 29.630 2.63 0.00 0.00 2.62
3675 7153 9.897744 CTTTAAGAGTGCTCACATAAAATGAAA 57.102 29.630 2.63 0.00 0.00 2.69
3676 7154 9.066892 ACTTTAAGAGTGCTCACATAAAATGAA 57.933 29.630 0.00 0.00 37.17 2.57
3677 7155 8.621532 ACTTTAAGAGTGCTCACATAAAATGA 57.378 30.769 0.00 0.00 37.17 2.57
3678 7156 9.683069 AAACTTTAAGAGTGCTCACATAAAATG 57.317 29.630 0.00 0.00 39.00 2.32
3680 7158 9.730420 GAAAACTTTAAGAGTGCTCACATAAAA 57.270 29.630 0.00 0.00 39.00 1.52
3681 7159 9.120538 AGAAAACTTTAAGAGTGCTCACATAAA 57.879 29.630 0.00 4.71 39.00 1.40
3682 7160 8.677148 AGAAAACTTTAAGAGTGCTCACATAA 57.323 30.769 0.00 0.00 39.00 1.90
3683 7161 8.150945 AGAGAAAACTTTAAGAGTGCTCACATA 58.849 33.333 0.00 0.00 39.00 2.29
3684 7162 6.995091 AGAGAAAACTTTAAGAGTGCTCACAT 59.005 34.615 0.00 0.00 39.00 3.21
3685 7163 6.349300 AGAGAAAACTTTAAGAGTGCTCACA 58.651 36.000 0.00 0.00 39.00 3.58
3686 7164 6.852858 AGAGAAAACTTTAAGAGTGCTCAC 57.147 37.500 0.00 0.00 39.00 3.51
3687 7165 6.823689 ACAAGAGAAAACTTTAAGAGTGCTCA 59.176 34.615 0.00 0.00 39.00 4.26
3688 7166 7.128976 CACAAGAGAAAACTTTAAGAGTGCTC 58.871 38.462 0.00 0.00 39.00 4.26
3689 7167 6.458888 GCACAAGAGAAAACTTTAAGAGTGCT 60.459 38.462 0.00 0.00 39.45 4.40
3690 7168 5.683302 GCACAAGAGAAAACTTTAAGAGTGC 59.317 40.000 0.00 0.00 39.00 4.40
3691 7169 6.688813 GTGCACAAGAGAAAACTTTAAGAGTG 59.311 38.462 13.17 0.00 39.00 3.51
3692 7170 6.599638 AGTGCACAAGAGAAAACTTTAAGAGT 59.400 34.615 21.04 0.00 41.47 3.24
3693 7171 7.020914 AGTGCACAAGAGAAAACTTTAAGAG 57.979 36.000 21.04 0.00 0.00 2.85
3694 7172 7.391148 AAGTGCACAAGAGAAAACTTTAAGA 57.609 32.000 21.04 0.00 0.00 2.10
3695 7173 7.044706 CGAAAGTGCACAAGAGAAAACTTTAAG 60.045 37.037 21.04 1.33 37.82 1.85
3696 7174 6.745450 CGAAAGTGCACAAGAGAAAACTTTAA 59.255 34.615 21.04 0.00 37.82 1.52
3697 7175 6.128117 ACGAAAGTGCACAAGAGAAAACTTTA 60.128 34.615 21.04 0.00 46.97 1.85
3698 7176 5.095490 CGAAAGTGCACAAGAGAAAACTTT 58.905 37.500 21.04 6.35 39.77 2.66
3699 7177 4.156008 ACGAAAGTGCACAAGAGAAAACTT 59.844 37.500 21.04 0.00 46.97 2.66
3700 7178 3.689649 ACGAAAGTGCACAAGAGAAAACT 59.310 39.130 21.04 0.00 46.97 2.66
3701 7179 4.016113 ACGAAAGTGCACAAGAGAAAAC 57.984 40.909 21.04 0.00 46.97 2.43
3734 7212 2.875933 CTCCAGCCTCGTGTAACAAAAA 59.124 45.455 0.00 0.00 35.74 1.94
3735 7213 2.489971 CTCCAGCCTCGTGTAACAAAA 58.510 47.619 0.00 0.00 35.74 2.44
3746 7224 1.538950 CTGAAAAAGTGCTCCAGCCTC 59.461 52.381 0.00 0.00 41.18 4.70
3760 7238 9.736023 GATTTCTGCTTAAGAGAAAACTGAAAA 57.264 29.630 22.55 8.10 41.55 2.29
3776 7254 6.705863 AACTTGAAGTTCTGATTTCTGCTT 57.294 33.333 4.45 0.00 31.77 3.91
3797 7275 7.429340 CCTTGATTTCATAAGCATACACGAAAC 59.571 37.037 0.00 0.00 28.38 2.78
3924 7402 4.083855 TGAAATCAGAAACTAACTGCGCTG 60.084 41.667 13.23 13.23 35.61 5.18
3925 7403 4.065088 TGAAATCAGAAACTAACTGCGCT 58.935 39.130 9.73 0.00 35.61 5.92
3926 7404 4.404507 TGAAATCAGAAACTAACTGCGC 57.595 40.909 0.00 0.00 35.61 6.09
3927 7405 7.011389 TGGATATGAAATCAGAAACTAACTGCG 59.989 37.037 0.00 0.00 35.61 5.18
3928 7406 8.213518 TGGATATGAAATCAGAAACTAACTGC 57.786 34.615 0.00 0.00 35.61 4.40
3930 7408 9.965902 ACTTGGATATGAAATCAGAAACTAACT 57.034 29.630 0.00 0.00 0.00 2.24
3935 7413 7.814107 TGCAAACTTGGATATGAAATCAGAAAC 59.186 33.333 0.00 0.00 0.00 2.78
3936 7414 7.894708 TGCAAACTTGGATATGAAATCAGAAA 58.105 30.769 0.00 0.00 0.00 2.52
3939 7417 5.747197 GCTGCAAACTTGGATATGAAATCAG 59.253 40.000 0.00 0.00 0.00 2.90
3940 7418 5.419788 AGCTGCAAACTTGGATATGAAATCA 59.580 36.000 1.02 0.00 0.00 2.57
3990 7469 6.798959 CAGAAGTTTAAGTTTGACATAGCAGC 59.201 38.462 0.00 0.00 0.00 5.25
3998 7477 4.885325 TCACCCCAGAAGTTTAAGTTTGAC 59.115 41.667 0.00 0.00 0.00 3.18
4021 7500 5.351233 TTTCATGAGCGTACACGAAATTT 57.649 34.783 5.84 0.00 43.02 1.82
4053 7570 3.068590 CACACAGGAAACCTTGCAATCTT 59.931 43.478 0.00 0.00 0.00 2.40
4077 7594 0.032678 CTATCGCCCGTGCAGAAGAT 59.967 55.000 0.00 0.00 37.32 2.40
4078 7595 1.320344 ACTATCGCCCGTGCAGAAGA 61.320 55.000 0.00 0.00 37.32 2.87
4100 7617 5.045869 TCAAATACCTGCTGCCTAGTTTAGT 60.046 40.000 0.00 0.00 0.00 2.24
4103 7620 4.301072 TCAAATACCTGCTGCCTAGTTT 57.699 40.909 0.00 0.00 0.00 2.66
4131 7648 0.320421 ACACGTGTACACTGCCATCC 60.320 55.000 21.98 0.00 0.00 3.51
4137 7654 2.789339 CTGACTGAACACGTGTACACTG 59.211 50.000 23.69 20.04 0.00 3.66
4140 7657 1.407618 AGCTGACTGAACACGTGTACA 59.592 47.619 23.69 15.17 0.00 2.90
4143 7660 0.747255 AGAGCTGACTGAACACGTGT 59.253 50.000 17.22 17.22 0.00 4.49
4144 7661 1.858091 AAGAGCTGACTGAACACGTG 58.142 50.000 15.48 15.48 0.00 4.49
4145 7662 2.604046 AAAGAGCTGACTGAACACGT 57.396 45.000 0.00 0.00 0.00 4.49
4193 7710 1.438651 TTCAATCGTCCAAGCGGAAG 58.561 50.000 0.00 0.00 45.20 3.46
4207 7724 6.940298 TGAGACGAAAGGGAGTTTTATTCAAT 59.060 34.615 0.00 0.00 0.00 2.57
4216 7733 7.665974 AGAAATAATTTGAGACGAAAGGGAGTT 59.334 33.333 0.00 0.00 0.00 3.01
4247 7764 7.012138 GGTTGTCTCAGATACGTATCTAGACAA 59.988 40.741 39.44 39.44 45.55 3.18
4249 7766 6.482641 TGGTTGTCTCAGATACGTATCTAGAC 59.517 42.308 34.40 34.40 40.91 2.59
4250 7767 6.589135 TGGTTGTCTCAGATACGTATCTAGA 58.411 40.000 32.06 27.84 40.91 2.43
4251 7768 6.862711 TGGTTGTCTCAGATACGTATCTAG 57.137 41.667 32.06 26.51 40.91 2.43
4252 7769 7.818997 ATTGGTTGTCTCAGATACGTATCTA 57.181 36.000 32.06 17.98 40.91 1.98
4253 7770 6.716934 ATTGGTTGTCTCAGATACGTATCT 57.283 37.500 28.45 28.45 43.51 1.98
4254 7771 7.168302 CAGAATTGGTTGTCTCAGATACGTATC 59.832 40.741 25.00 25.00 0.00 2.24
4255 7772 6.980978 CAGAATTGGTTGTCTCAGATACGTAT 59.019 38.462 8.05 8.05 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.