Multiple sequence alignment - TraesCS3D01G382700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G382700 chr3D 100.000 2492 0 0 1 2492 498357233 498354742 0.000000e+00 4602.0
1 TraesCS3D01G382700 chr3D 87.328 1381 82 49 527 1865 498396154 498394825 0.000000e+00 1495.0
2 TraesCS3D01G382700 chr3D 86.772 1134 90 27 488 1595 498264976 498263877 0.000000e+00 1208.0
3 TraesCS3D01G382700 chr3D 84.128 1216 109 43 537 1728 498484689 498483534 0.000000e+00 1099.0
4 TraesCS3D01G382700 chr3D 91.897 543 31 9 963 1495 498423723 498423184 0.000000e+00 747.0
5 TraesCS3D01G382700 chr3D 80.161 373 37 20 1527 1865 498423123 498422754 6.880000e-61 244.0
6 TraesCS3D01G382700 chr3D 83.500 200 25 4 516 709 498424056 498423859 1.970000e-41 180.0
7 TraesCS3D01G382700 chr3A 85.637 1288 105 41 493 1766 638447390 638446169 0.000000e+00 1280.0
8 TraesCS3D01G382700 chr3A 85.958 997 84 40 822 1794 638711570 638710606 0.000000e+00 1014.0
9 TraesCS3D01G382700 chr3A 88.818 787 51 24 778 1545 638468023 638467255 0.000000e+00 931.0
10 TraesCS3D01G382700 chr3A 83.366 1022 94 35 518 1500 638453405 638452421 0.000000e+00 876.0
11 TraesCS3D01G382700 chr3A 82.063 630 107 6 1865 2492 219756385 219757010 1.310000e-147 532.0
12 TraesCS3D01G382700 chr3A 91.129 124 11 0 1613 1736 638452308 638452185 4.260000e-38 169.0
13 TraesCS3D01G382700 chr3B 85.740 1115 81 36 490 1587 659276448 659275395 0.000000e+00 1107.0
14 TraesCS3D01G382700 chr3B 81.559 1296 136 63 495 1728 659305898 659304644 0.000000e+00 974.0
15 TraesCS3D01G382700 chr3B 89.952 627 60 2 1867 2491 676934647 676934022 0.000000e+00 806.0
16 TraesCS3D01G382700 chr3B 84.574 188 22 3 527 709 659298487 659298302 1.970000e-41 180.0
17 TraesCS3D01G382700 chr3B 87.500 152 14 2 1595 1741 659297463 659297312 1.190000e-38 171.0
18 TraesCS3D01G382700 chr3B 88.060 134 11 3 1613 1741 659296595 659296462 1.190000e-33 154.0
19 TraesCS3D01G382700 chr3B 82.243 107 14 3 1644 1748 659275395 659275292 1.230000e-13 87.9
20 TraesCS3D01G382700 chr5D 97.302 630 15 2 1865 2492 43202711 43203340 0.000000e+00 1068.0
21 TraesCS3D01G382700 chr5D 83.721 602 95 3 1873 2473 384371377 384371976 1.290000e-157 566.0
22 TraesCS3D01G382700 chr1D 97.134 628 15 2 1865 2492 389605931 389606555 0.000000e+00 1057.0
23 TraesCS3D01G382700 chr5B 90.016 631 58 3 1865 2492 271186871 271186243 0.000000e+00 811.0
24 TraesCS3D01G382700 chr4B 88.694 628 71 0 1865 2492 643889552 643890179 0.000000e+00 767.0
25 TraesCS3D01G382700 chr7D 81.369 628 105 3 1865 2492 230445786 230446401 3.700000e-138 501.0
26 TraesCS3D01G382700 chr7B 79.441 608 113 11 1871 2473 112641038 112640438 1.070000e-113 420.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G382700 chr3D 498354742 498357233 2491 True 4602.000000 4602 100.0000 1 2492 1 chr3D.!!$R2 2491
1 TraesCS3D01G382700 chr3D 498394825 498396154 1329 True 1495.000000 1495 87.3280 527 1865 1 chr3D.!!$R3 1338
2 TraesCS3D01G382700 chr3D 498263877 498264976 1099 True 1208.000000 1208 86.7720 488 1595 1 chr3D.!!$R1 1107
3 TraesCS3D01G382700 chr3D 498483534 498484689 1155 True 1099.000000 1099 84.1280 537 1728 1 chr3D.!!$R4 1191
4 TraesCS3D01G382700 chr3D 498422754 498424056 1302 True 390.333333 747 85.1860 516 1865 3 chr3D.!!$R5 1349
5 TraesCS3D01G382700 chr3A 638446169 638447390 1221 True 1280.000000 1280 85.6370 493 1766 1 chr3A.!!$R1 1273
6 TraesCS3D01G382700 chr3A 638710606 638711570 964 True 1014.000000 1014 85.9580 822 1794 1 chr3A.!!$R3 972
7 TraesCS3D01G382700 chr3A 638467255 638468023 768 True 931.000000 931 88.8180 778 1545 1 chr3A.!!$R2 767
8 TraesCS3D01G382700 chr3A 219756385 219757010 625 False 532.000000 532 82.0630 1865 2492 1 chr3A.!!$F1 627
9 TraesCS3D01G382700 chr3A 638452185 638453405 1220 True 522.500000 876 87.2475 518 1736 2 chr3A.!!$R4 1218
10 TraesCS3D01G382700 chr3B 659304644 659305898 1254 True 974.000000 974 81.5590 495 1728 1 chr3B.!!$R1 1233
11 TraesCS3D01G382700 chr3B 676934022 676934647 625 True 806.000000 806 89.9520 1867 2491 1 chr3B.!!$R2 624
12 TraesCS3D01G382700 chr3B 659275292 659276448 1156 True 597.450000 1107 83.9915 490 1748 2 chr3B.!!$R3 1258
13 TraesCS3D01G382700 chr5D 43202711 43203340 629 False 1068.000000 1068 97.3020 1865 2492 1 chr5D.!!$F1 627
14 TraesCS3D01G382700 chr5D 384371377 384371976 599 False 566.000000 566 83.7210 1873 2473 1 chr5D.!!$F2 600
15 TraesCS3D01G382700 chr1D 389605931 389606555 624 False 1057.000000 1057 97.1340 1865 2492 1 chr1D.!!$F1 627
16 TraesCS3D01G382700 chr5B 271186243 271186871 628 True 811.000000 811 90.0160 1865 2492 1 chr5B.!!$R1 627
17 TraesCS3D01G382700 chr4B 643889552 643890179 627 False 767.000000 767 88.6940 1865 2492 1 chr4B.!!$F1 627
18 TraesCS3D01G382700 chr7D 230445786 230446401 615 False 501.000000 501 81.3690 1865 2492 1 chr7D.!!$F1 627
19 TraesCS3D01G382700 chr7B 112640438 112641038 600 True 420.000000 420 79.4410 1871 2473 1 chr7B.!!$R1 602

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
166 167 0.107703 CTGCTCGGCCTTTCATGGTA 60.108 55.0 0.0 0.0 0.0 3.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1857 2109 0.251341 ACCAACCCAAGAGATGCACC 60.251 55.0 0.0 0.0 0.0 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.426689 TGCTCAATAATGTTCTCTCCAGT 57.573 39.130 0.00 0.00 0.00 4.00
23 24 5.809001 TGCTCAATAATGTTCTCTCCAGTT 58.191 37.500 0.00 0.00 0.00 3.16
24 25 6.240894 TGCTCAATAATGTTCTCTCCAGTTT 58.759 36.000 0.00 0.00 0.00 2.66
25 26 6.372659 TGCTCAATAATGTTCTCTCCAGTTTC 59.627 38.462 0.00 0.00 0.00 2.78
26 27 6.597280 GCTCAATAATGTTCTCTCCAGTTTCT 59.403 38.462 0.00 0.00 0.00 2.52
27 28 7.120432 GCTCAATAATGTTCTCTCCAGTTTCTT 59.880 37.037 0.00 0.00 0.00 2.52
28 29 8.553459 TCAATAATGTTCTCTCCAGTTTCTTC 57.447 34.615 0.00 0.00 0.00 2.87
29 30 8.378565 TCAATAATGTTCTCTCCAGTTTCTTCT 58.621 33.333 0.00 0.00 0.00 2.85
30 31 8.663911 CAATAATGTTCTCTCCAGTTTCTTCTC 58.336 37.037 0.00 0.00 0.00 2.87
31 32 4.608948 TGTTCTCTCCAGTTTCTTCTCC 57.391 45.455 0.00 0.00 0.00 3.71
32 33 4.227197 TGTTCTCTCCAGTTTCTTCTCCT 58.773 43.478 0.00 0.00 0.00 3.69
33 34 4.039730 TGTTCTCTCCAGTTTCTTCTCCTG 59.960 45.833 0.00 0.00 0.00 3.86
34 35 2.564947 TCTCTCCAGTTTCTTCTCCTGC 59.435 50.000 0.00 0.00 0.00 4.85
35 36 2.566724 CTCTCCAGTTTCTTCTCCTGCT 59.433 50.000 0.00 0.00 0.00 4.24
36 37 2.564947 TCTCCAGTTTCTTCTCCTGCTC 59.435 50.000 0.00 0.00 0.00 4.26
37 38 1.625818 TCCAGTTTCTTCTCCTGCTCC 59.374 52.381 0.00 0.00 0.00 4.70
38 39 1.674221 CCAGTTTCTTCTCCTGCTCCG 60.674 57.143 0.00 0.00 0.00 4.63
39 40 1.273606 CAGTTTCTTCTCCTGCTCCGA 59.726 52.381 0.00 0.00 0.00 4.55
40 41 2.093764 CAGTTTCTTCTCCTGCTCCGAT 60.094 50.000 0.00 0.00 0.00 4.18
41 42 2.093764 AGTTTCTTCTCCTGCTCCGATG 60.094 50.000 0.00 0.00 0.00 3.84
42 43 0.826715 TTCTTCTCCTGCTCCGATGG 59.173 55.000 0.00 0.00 0.00 3.51
43 44 1.227497 CTTCTCCTGCTCCGATGGC 60.227 63.158 0.00 0.00 0.00 4.40
44 45 2.657102 CTTCTCCTGCTCCGATGGCC 62.657 65.000 0.00 0.00 0.00 5.36
45 46 4.247380 CTCCTGCTCCGATGGCCC 62.247 72.222 0.00 0.00 0.00 5.80
47 48 3.882326 CCTGCTCCGATGGCCCAT 61.882 66.667 0.00 0.00 0.00 4.00
48 49 2.281345 CTGCTCCGATGGCCCATC 60.281 66.667 14.03 14.03 37.50 3.51
49 50 3.089217 TGCTCCGATGGCCCATCA 61.089 61.111 23.06 4.08 40.54 3.07
50 51 2.281345 GCTCCGATGGCCCATCAG 60.281 66.667 23.06 14.56 40.54 2.90
51 52 2.811514 GCTCCGATGGCCCATCAGA 61.812 63.158 23.06 16.22 40.54 3.27
52 53 2.064628 CTCCGATGGCCCATCAGAT 58.935 57.895 23.06 0.00 40.54 2.90
53 54 0.399454 CTCCGATGGCCCATCAGATT 59.601 55.000 23.06 0.00 40.54 2.40
54 55 0.846015 TCCGATGGCCCATCAGATTT 59.154 50.000 23.06 0.00 40.54 2.17
55 56 2.038952 CTCCGATGGCCCATCAGATTTA 59.961 50.000 23.06 1.22 40.54 1.40
56 57 2.038952 TCCGATGGCCCATCAGATTTAG 59.961 50.000 23.06 5.15 40.54 1.85
57 58 2.430465 CGATGGCCCATCAGATTTAGG 58.570 52.381 23.06 0.72 40.54 2.69
58 59 2.038952 CGATGGCCCATCAGATTTAGGA 59.961 50.000 23.06 0.00 40.54 2.94
59 60 3.496692 CGATGGCCCATCAGATTTAGGAA 60.497 47.826 23.06 0.00 40.54 3.36
60 61 3.297134 TGGCCCATCAGATTTAGGAAC 57.703 47.619 0.00 0.00 0.00 3.62
61 62 2.580322 TGGCCCATCAGATTTAGGAACA 59.420 45.455 0.00 0.00 0.00 3.18
62 63 3.011144 TGGCCCATCAGATTTAGGAACAA 59.989 43.478 0.00 0.00 0.00 2.83
63 64 4.023291 GGCCCATCAGATTTAGGAACAAA 58.977 43.478 0.00 0.00 0.00 2.83
64 65 4.466015 GGCCCATCAGATTTAGGAACAAAA 59.534 41.667 0.00 0.00 0.00 2.44
65 66 5.129320 GGCCCATCAGATTTAGGAACAAAAT 59.871 40.000 0.00 0.00 0.00 1.82
66 67 6.276091 GCCCATCAGATTTAGGAACAAAATC 58.724 40.000 1.25 1.25 41.57 2.17
67 68 6.498304 CCCATCAGATTTAGGAACAAAATCG 58.502 40.000 0.00 0.00 44.44 3.34
68 69 6.460123 CCCATCAGATTTAGGAACAAAATCGG 60.460 42.308 0.00 0.00 44.44 4.18
69 70 6.095440 CCATCAGATTTAGGAACAAAATCGGT 59.905 38.462 8.01 0.00 44.44 4.69
70 71 6.737254 TCAGATTTAGGAACAAAATCGGTC 57.263 37.500 8.01 0.00 44.44 4.79
71 72 6.234920 TCAGATTTAGGAACAAAATCGGTCA 58.765 36.000 8.01 0.00 44.44 4.02
72 73 6.371548 TCAGATTTAGGAACAAAATCGGTCAG 59.628 38.462 8.01 0.00 44.44 3.51
73 74 6.371548 CAGATTTAGGAACAAAATCGGTCAGA 59.628 38.462 0.00 0.00 44.44 3.27
74 75 5.934935 TTTAGGAACAAAATCGGTCAGAC 57.065 39.130 0.00 0.00 0.00 3.51
75 76 3.485463 AGGAACAAAATCGGTCAGACA 57.515 42.857 2.17 0.00 0.00 3.41
76 77 4.021102 AGGAACAAAATCGGTCAGACAT 57.979 40.909 2.17 0.00 0.00 3.06
77 78 3.753272 AGGAACAAAATCGGTCAGACATG 59.247 43.478 2.17 0.00 0.00 3.21
78 79 3.502211 GGAACAAAATCGGTCAGACATGT 59.498 43.478 0.00 0.00 0.00 3.21
79 80 4.023193 GGAACAAAATCGGTCAGACATGTT 60.023 41.667 0.00 3.77 35.96 2.71
80 81 5.507315 GGAACAAAATCGGTCAGACATGTTT 60.507 40.000 0.00 0.00 34.49 2.83
81 82 6.293735 GGAACAAAATCGGTCAGACATGTTTA 60.294 38.462 0.00 0.00 34.49 2.01
82 83 6.817765 ACAAAATCGGTCAGACATGTTTAT 57.182 33.333 0.00 0.00 0.00 1.40
83 84 6.842163 ACAAAATCGGTCAGACATGTTTATC 58.158 36.000 0.00 0.00 0.00 1.75
84 85 6.655003 ACAAAATCGGTCAGACATGTTTATCT 59.345 34.615 0.00 0.00 0.00 1.98
85 86 7.174946 ACAAAATCGGTCAGACATGTTTATCTT 59.825 33.333 0.00 0.00 0.00 2.40
86 87 6.910536 AATCGGTCAGACATGTTTATCTTC 57.089 37.500 0.00 0.00 0.00 2.87
87 88 4.755411 TCGGTCAGACATGTTTATCTTCC 58.245 43.478 0.00 0.00 0.00 3.46
88 89 3.871594 CGGTCAGACATGTTTATCTTCCC 59.128 47.826 0.00 0.00 0.00 3.97
89 90 4.200092 GGTCAGACATGTTTATCTTCCCC 58.800 47.826 0.00 0.00 0.00 4.81
90 91 4.080299 GGTCAGACATGTTTATCTTCCCCT 60.080 45.833 0.00 0.00 0.00 4.79
91 92 5.119694 GTCAGACATGTTTATCTTCCCCTC 58.880 45.833 0.00 0.00 0.00 4.30
92 93 5.032846 TCAGACATGTTTATCTTCCCCTCT 58.967 41.667 0.00 0.00 0.00 3.69
93 94 5.488919 TCAGACATGTTTATCTTCCCCTCTT 59.511 40.000 0.00 0.00 0.00 2.85
94 95 6.012508 TCAGACATGTTTATCTTCCCCTCTTT 60.013 38.462 0.00 0.00 0.00 2.52
95 96 6.660949 CAGACATGTTTATCTTCCCCTCTTTT 59.339 38.462 0.00 0.00 0.00 2.27
96 97 7.177392 CAGACATGTTTATCTTCCCCTCTTTTT 59.823 37.037 0.00 0.00 0.00 1.94
97 98 7.177392 AGACATGTTTATCTTCCCCTCTTTTTG 59.823 37.037 0.00 0.00 0.00 2.44
98 99 6.782494 ACATGTTTATCTTCCCCTCTTTTTGT 59.218 34.615 0.00 0.00 0.00 2.83
99 100 6.648879 TGTTTATCTTCCCCTCTTTTTGTG 57.351 37.500 0.00 0.00 0.00 3.33
100 101 5.538433 TGTTTATCTTCCCCTCTTTTTGTGG 59.462 40.000 0.00 0.00 0.00 4.17
101 102 3.903530 ATCTTCCCCTCTTTTTGTGGT 57.096 42.857 0.00 0.00 0.00 4.16
102 103 2.944129 TCTTCCCCTCTTTTTGTGGTG 58.056 47.619 0.00 0.00 0.00 4.17
103 104 1.963515 CTTCCCCTCTTTTTGTGGTGG 59.036 52.381 0.00 0.00 0.00 4.61
104 105 0.930726 TCCCCTCTTTTTGTGGTGGT 59.069 50.000 0.00 0.00 0.00 4.16
105 106 1.133606 TCCCCTCTTTTTGTGGTGGTC 60.134 52.381 0.00 0.00 0.00 4.02
106 107 0.951558 CCCTCTTTTTGTGGTGGTCG 59.048 55.000 0.00 0.00 0.00 4.79
107 108 1.675552 CCTCTTTTTGTGGTGGTCGT 58.324 50.000 0.00 0.00 0.00 4.34
108 109 1.333619 CCTCTTTTTGTGGTGGTCGTG 59.666 52.381 0.00 0.00 0.00 4.35
109 110 1.333619 CTCTTTTTGTGGTGGTCGTGG 59.666 52.381 0.00 0.00 0.00 4.94
110 111 1.099689 CTTTTTGTGGTGGTCGTGGT 58.900 50.000 0.00 0.00 0.00 4.16
111 112 0.811915 TTTTTGTGGTGGTCGTGGTG 59.188 50.000 0.00 0.00 0.00 4.17
112 113 1.032657 TTTTGTGGTGGTCGTGGTGG 61.033 55.000 0.00 0.00 0.00 4.61
113 114 2.199613 TTTGTGGTGGTCGTGGTGGT 62.200 55.000 0.00 0.00 0.00 4.16
114 115 2.590575 GTGGTGGTCGTGGTGGTG 60.591 66.667 0.00 0.00 0.00 4.17
115 116 3.867783 TGGTGGTCGTGGTGGTGG 61.868 66.667 0.00 0.00 0.00 4.61
116 117 3.868985 GGTGGTCGTGGTGGTGGT 61.869 66.667 0.00 0.00 0.00 4.16
117 118 2.590575 GTGGTCGTGGTGGTGGTG 60.591 66.667 0.00 0.00 0.00 4.17
118 119 3.867783 TGGTCGTGGTGGTGGTGG 61.868 66.667 0.00 0.00 0.00 4.61
119 120 3.552384 GGTCGTGGTGGTGGTGGA 61.552 66.667 0.00 0.00 0.00 4.02
120 121 2.506962 GTCGTGGTGGTGGTGGAA 59.493 61.111 0.00 0.00 0.00 3.53
121 122 1.597027 GTCGTGGTGGTGGTGGAAG 60.597 63.158 0.00 0.00 0.00 3.46
122 123 2.281484 CGTGGTGGTGGTGGAAGG 60.281 66.667 0.00 0.00 0.00 3.46
123 124 2.115266 GTGGTGGTGGTGGAAGGG 59.885 66.667 0.00 0.00 0.00 3.95
124 125 3.182263 TGGTGGTGGTGGAAGGGG 61.182 66.667 0.00 0.00 0.00 4.79
125 126 3.979497 GGTGGTGGTGGAAGGGGG 61.979 72.222 0.00 0.00 0.00 5.40
126 127 2.856988 GTGGTGGTGGAAGGGGGA 60.857 66.667 0.00 0.00 0.00 4.81
127 128 2.038221 TGGTGGTGGAAGGGGGAA 60.038 61.111 0.00 0.00 0.00 3.97
128 129 2.160171 TGGTGGTGGAAGGGGGAAG 61.160 63.158 0.00 0.00 0.00 3.46
129 130 2.160853 GGTGGTGGAAGGGGGAAGT 61.161 63.158 0.00 0.00 0.00 3.01
130 131 1.726192 GGTGGTGGAAGGGGGAAGTT 61.726 60.000 0.00 0.00 0.00 2.66
131 132 0.539669 GTGGTGGAAGGGGGAAGTTG 60.540 60.000 0.00 0.00 0.00 3.16
132 133 1.076727 GGTGGAAGGGGGAAGTTGG 59.923 63.158 0.00 0.00 0.00 3.77
133 134 1.076727 GTGGAAGGGGGAAGTTGGG 59.923 63.158 0.00 0.00 0.00 4.12
134 135 2.167037 TGGAAGGGGGAAGTTGGGG 61.167 63.158 0.00 0.00 0.00 4.96
135 136 2.167729 GGAAGGGGGAAGTTGGGGT 61.168 63.158 0.00 0.00 0.00 4.95
136 137 1.076727 GAAGGGGGAAGTTGGGGTG 59.923 63.158 0.00 0.00 0.00 4.61
137 138 1.703597 AAGGGGGAAGTTGGGGTGT 60.704 57.895 0.00 0.00 0.00 4.16
138 139 2.018884 AAGGGGGAAGTTGGGGTGTG 62.019 60.000 0.00 0.00 0.00 3.82
139 140 2.774633 GGGGGAAGTTGGGGTGTGT 61.775 63.158 0.00 0.00 0.00 3.72
140 141 1.228459 GGGGAAGTTGGGGTGTGTC 60.228 63.158 0.00 0.00 0.00 3.67
141 142 1.716028 GGGGAAGTTGGGGTGTGTCT 61.716 60.000 0.00 0.00 0.00 3.41
142 143 0.185175 GGGAAGTTGGGGTGTGTCTT 59.815 55.000 0.00 0.00 0.00 3.01
143 144 1.605753 GGAAGTTGGGGTGTGTCTTC 58.394 55.000 0.00 0.00 35.29 2.87
144 145 1.133915 GGAAGTTGGGGTGTGTCTTCA 60.134 52.381 0.00 0.00 37.02 3.02
145 146 1.947456 GAAGTTGGGGTGTGTCTTCAC 59.053 52.381 0.00 0.00 44.08 3.18
152 153 2.919971 GTGTGTCTTCACCCTGCTC 58.080 57.895 0.00 0.00 43.26 4.26
153 154 0.946221 GTGTGTCTTCACCCTGCTCG 60.946 60.000 0.00 0.00 43.26 5.03
154 155 1.374758 GTGTCTTCACCCTGCTCGG 60.375 63.158 0.00 0.00 38.51 4.63
155 156 2.435059 GTCTTCACCCTGCTCGGC 60.435 66.667 0.00 0.00 0.00 5.54
156 157 3.706373 TCTTCACCCTGCTCGGCC 61.706 66.667 0.00 0.00 0.00 6.13
157 158 3.710722 CTTCACCCTGCTCGGCCT 61.711 66.667 0.00 0.00 0.00 5.19
158 159 3.249189 TTCACCCTGCTCGGCCTT 61.249 61.111 0.00 0.00 0.00 4.35
159 160 2.754664 CTTCACCCTGCTCGGCCTTT 62.755 60.000 0.00 0.00 0.00 3.11
160 161 2.747855 CACCCTGCTCGGCCTTTC 60.748 66.667 0.00 0.00 0.00 2.62
161 162 3.249189 ACCCTGCTCGGCCTTTCA 61.249 61.111 0.00 0.00 0.00 2.69
162 163 2.273449 CCCTGCTCGGCCTTTCAT 59.727 61.111 0.00 0.00 0.00 2.57
163 164 2.117156 CCCTGCTCGGCCTTTCATG 61.117 63.158 0.00 0.00 0.00 3.07
164 165 2.117156 CCTGCTCGGCCTTTCATGG 61.117 63.158 0.00 0.00 0.00 3.66
165 166 1.377725 CTGCTCGGCCTTTCATGGT 60.378 57.895 0.00 0.00 0.00 3.55
166 167 0.107703 CTGCTCGGCCTTTCATGGTA 60.108 55.000 0.00 0.00 0.00 3.25
167 168 0.107703 TGCTCGGCCTTTCATGGTAG 60.108 55.000 0.00 0.00 0.00 3.18
168 169 1.440145 GCTCGGCCTTTCATGGTAGC 61.440 60.000 0.00 0.00 0.00 3.58
169 170 1.153449 TCGGCCTTTCATGGTAGCG 60.153 57.895 0.00 0.00 0.00 4.26
170 171 1.153449 CGGCCTTTCATGGTAGCGA 60.153 57.895 0.00 0.00 0.00 4.93
171 172 1.429148 CGGCCTTTCATGGTAGCGAC 61.429 60.000 0.00 0.00 0.00 5.19
172 173 1.429148 GGCCTTTCATGGTAGCGACG 61.429 60.000 0.00 0.00 0.00 5.12
173 174 2.006772 CCTTTCATGGTAGCGACGC 58.993 57.895 13.03 13.03 0.00 5.19
174 175 0.460284 CCTTTCATGGTAGCGACGCT 60.460 55.000 27.45 27.45 43.41 5.07
175 176 0.924090 CTTTCATGGTAGCGACGCTC 59.076 55.000 28.21 17.27 40.44 5.03
176 177 0.245266 TTTCATGGTAGCGACGCTCA 59.755 50.000 28.21 19.62 40.44 4.26
177 178 0.459899 TTCATGGTAGCGACGCTCAT 59.540 50.000 28.21 21.05 40.44 2.90
178 179 0.459899 TCATGGTAGCGACGCTCATT 59.540 50.000 28.21 4.86 40.44 2.57
179 180 1.134818 TCATGGTAGCGACGCTCATTT 60.135 47.619 28.21 7.56 40.44 2.32
180 181 2.100087 TCATGGTAGCGACGCTCATTTA 59.900 45.455 28.21 11.70 40.44 1.40
181 182 2.203800 TGGTAGCGACGCTCATTTAG 57.796 50.000 28.21 0.00 40.44 1.85
190 191 3.853623 GCTCATTTAGCCAATCCGC 57.146 52.632 0.00 0.00 46.25 5.54
191 192 0.312102 GCTCATTTAGCCAATCCGCC 59.688 55.000 0.00 0.00 46.25 6.13
192 193 1.679139 CTCATTTAGCCAATCCGCCA 58.321 50.000 0.00 0.00 0.00 5.69
193 194 1.334869 CTCATTTAGCCAATCCGCCAC 59.665 52.381 0.00 0.00 0.00 5.01
194 195 1.064758 TCATTTAGCCAATCCGCCACT 60.065 47.619 0.00 0.00 0.00 4.00
195 196 1.750778 CATTTAGCCAATCCGCCACTT 59.249 47.619 0.00 0.00 0.00 3.16
196 197 2.791347 TTTAGCCAATCCGCCACTTA 57.209 45.000 0.00 0.00 0.00 2.24
197 198 2.325583 TTAGCCAATCCGCCACTTAG 57.674 50.000 0.00 0.00 0.00 2.18
198 199 0.468226 TAGCCAATCCGCCACTTAGG 59.532 55.000 0.00 0.00 41.84 2.69
199 200 1.223487 GCCAATCCGCCACTTAGGA 59.777 57.895 0.00 0.00 41.22 2.94
200 201 1.095807 GCCAATCCGCCACTTAGGAC 61.096 60.000 0.00 0.00 41.22 3.85
201 202 0.810031 CCAATCCGCCACTTAGGACG 60.810 60.000 0.00 0.00 41.22 4.79
204 205 2.183555 CCGCCACTTAGGACGGTC 59.816 66.667 0.00 0.00 45.82 4.79
205 206 2.202570 CGCCACTTAGGACGGTCG 60.203 66.667 1.43 0.00 41.22 4.79
206 207 2.693762 CGCCACTTAGGACGGTCGA 61.694 63.158 1.43 0.00 41.22 4.20
207 208 1.139095 GCCACTTAGGACGGTCGAG 59.861 63.158 1.43 3.00 41.22 4.04
208 209 1.139095 CCACTTAGGACGGTCGAGC 59.861 63.158 4.06 4.06 41.22 5.03
209 210 1.139095 CACTTAGGACGGTCGAGCC 59.861 63.158 9.39 1.35 0.00 4.70
210 211 1.303888 ACTTAGGACGGTCGAGCCA 60.304 57.895 9.39 0.00 36.97 4.75
211 212 0.896940 ACTTAGGACGGTCGAGCCAA 60.897 55.000 9.39 0.00 36.97 4.52
212 213 0.458025 CTTAGGACGGTCGAGCCAAC 60.458 60.000 9.39 0.00 36.97 3.77
213 214 1.180456 TTAGGACGGTCGAGCCAACA 61.180 55.000 9.39 0.00 36.97 3.33
214 215 0.968901 TAGGACGGTCGAGCCAACAT 60.969 55.000 9.39 1.15 36.97 2.71
215 216 1.375523 GGACGGTCGAGCCAACATT 60.376 57.895 9.39 0.00 36.97 2.71
216 217 1.635663 GGACGGTCGAGCCAACATTG 61.636 60.000 9.39 0.00 36.97 2.82
217 218 0.949105 GACGGTCGAGCCAACATTGT 60.949 55.000 9.39 0.00 36.97 2.71
218 219 0.949105 ACGGTCGAGCCAACATTGTC 60.949 55.000 9.39 0.00 36.97 3.18
219 220 0.670546 CGGTCGAGCCAACATTGTCT 60.671 55.000 9.39 0.00 36.97 3.41
220 221 1.523758 GGTCGAGCCAACATTGTCTT 58.476 50.000 2.39 0.00 37.17 3.01
221 222 1.464997 GGTCGAGCCAACATTGTCTTC 59.535 52.381 2.39 0.00 37.17 2.87
222 223 2.417719 GTCGAGCCAACATTGTCTTCT 58.582 47.619 0.00 0.00 0.00 2.85
223 224 2.808543 GTCGAGCCAACATTGTCTTCTT 59.191 45.455 0.00 0.00 0.00 2.52
224 225 3.067106 TCGAGCCAACATTGTCTTCTTC 58.933 45.455 0.00 0.00 0.00 2.87
225 226 3.070018 CGAGCCAACATTGTCTTCTTCT 58.930 45.455 0.00 0.00 0.00 2.85
226 227 3.124297 CGAGCCAACATTGTCTTCTTCTC 59.876 47.826 0.00 0.00 0.00 2.87
227 228 3.416156 AGCCAACATTGTCTTCTTCTCC 58.584 45.455 0.00 0.00 0.00 3.71
228 229 3.149196 GCCAACATTGTCTTCTTCTCCA 58.851 45.455 0.00 0.00 0.00 3.86
229 230 3.190118 GCCAACATTGTCTTCTTCTCCAG 59.810 47.826 0.00 0.00 0.00 3.86
230 231 3.755378 CCAACATTGTCTTCTTCTCCAGG 59.245 47.826 0.00 0.00 0.00 4.45
231 232 3.064900 ACATTGTCTTCTTCTCCAGGC 57.935 47.619 0.00 0.00 0.00 4.85
232 233 2.373169 ACATTGTCTTCTTCTCCAGGCA 59.627 45.455 0.00 0.00 0.00 4.75
233 234 2.847327 TTGTCTTCTTCTCCAGGCAG 57.153 50.000 0.00 0.00 0.00 4.85
234 235 1.722034 TGTCTTCTTCTCCAGGCAGT 58.278 50.000 0.00 0.00 0.00 4.40
235 236 1.345741 TGTCTTCTTCTCCAGGCAGTG 59.654 52.381 0.00 0.00 0.00 3.66
245 246 3.473147 CAGGCAGTGGATCCTTCAG 57.527 57.895 14.23 4.56 0.00 3.02
246 247 0.907486 CAGGCAGTGGATCCTTCAGA 59.093 55.000 14.23 0.00 0.00 3.27
247 248 1.134461 CAGGCAGTGGATCCTTCAGAG 60.134 57.143 14.23 0.00 0.00 3.35
248 249 0.463474 GGCAGTGGATCCTTCAGAGC 60.463 60.000 14.23 8.29 0.00 4.09
249 250 0.809241 GCAGTGGATCCTTCAGAGCG 60.809 60.000 14.23 0.00 0.00 5.03
250 251 0.809241 CAGTGGATCCTTCAGAGCGC 60.809 60.000 14.23 0.00 0.00 5.92
251 252 1.522580 GTGGATCCTTCAGAGCGCC 60.523 63.158 14.23 0.00 0.00 6.53
252 253 1.989508 TGGATCCTTCAGAGCGCCA 60.990 57.895 14.23 0.00 0.00 5.69
253 254 1.221840 GGATCCTTCAGAGCGCCAA 59.778 57.895 2.29 0.00 0.00 4.52
254 255 1.092345 GGATCCTTCAGAGCGCCAAC 61.092 60.000 2.29 0.00 0.00 3.77
255 256 0.391661 GATCCTTCAGAGCGCCAACA 60.392 55.000 2.29 0.00 0.00 3.33
256 257 0.254178 ATCCTTCAGAGCGCCAACAT 59.746 50.000 2.29 0.00 0.00 2.71
257 258 0.674581 TCCTTCAGAGCGCCAACATG 60.675 55.000 2.29 0.00 0.00 3.21
258 259 1.136147 CTTCAGAGCGCCAACATGC 59.864 57.895 2.29 0.00 0.00 4.06
259 260 1.579964 CTTCAGAGCGCCAACATGCA 61.580 55.000 2.29 0.00 0.00 3.96
260 261 0.961857 TTCAGAGCGCCAACATGCAT 60.962 50.000 2.29 0.00 0.00 3.96
261 262 1.226575 CAGAGCGCCAACATGCATG 60.227 57.895 25.09 25.09 0.00 4.06
262 263 1.676635 AGAGCGCCAACATGCATGT 60.677 52.632 26.61 26.61 44.20 3.21
263 264 1.515519 GAGCGCCAACATGCATGTG 60.516 57.895 31.98 23.40 41.61 3.21
264 265 3.183323 GCGCCAACATGCATGTGC 61.183 61.111 31.98 27.93 41.61 4.57
275 276 3.446507 GCATGTGCAAATGGGGAAG 57.553 52.632 18.59 0.00 41.59 3.46
276 277 0.896923 GCATGTGCAAATGGGGAAGA 59.103 50.000 18.59 0.00 41.59 2.87
277 278 1.483415 GCATGTGCAAATGGGGAAGAT 59.517 47.619 18.59 0.00 41.59 2.40
278 279 2.740580 GCATGTGCAAATGGGGAAGATG 60.741 50.000 18.59 0.00 41.59 2.90
279 280 1.559368 TGTGCAAATGGGGAAGATGG 58.441 50.000 0.00 0.00 0.00 3.51
280 281 1.203162 TGTGCAAATGGGGAAGATGGT 60.203 47.619 0.00 0.00 0.00 3.55
281 282 1.205417 GTGCAAATGGGGAAGATGGTG 59.795 52.381 0.00 0.00 0.00 4.17
282 283 0.826062 GCAAATGGGGAAGATGGTGG 59.174 55.000 0.00 0.00 0.00 4.61
283 284 1.619432 GCAAATGGGGAAGATGGTGGA 60.619 52.381 0.00 0.00 0.00 4.02
284 285 2.956385 GCAAATGGGGAAGATGGTGGAT 60.956 50.000 0.00 0.00 0.00 3.41
285 286 3.377573 CAAATGGGGAAGATGGTGGATT 58.622 45.455 0.00 0.00 0.00 3.01
286 287 3.319031 AATGGGGAAGATGGTGGATTC 57.681 47.619 0.00 0.00 0.00 2.52
287 288 0.926293 TGGGGAAGATGGTGGATTCC 59.074 55.000 0.00 0.00 41.51 3.01
291 292 2.659428 GGAAGATGGTGGATTCCCTTG 58.341 52.381 0.00 0.00 37.17 3.61
292 293 2.024941 GGAAGATGGTGGATTCCCTTGT 60.025 50.000 0.00 0.00 37.17 3.16
293 294 3.564352 GGAAGATGGTGGATTCCCTTGTT 60.564 47.826 0.00 0.00 37.17 2.83
294 295 3.833559 AGATGGTGGATTCCCTTGTTT 57.166 42.857 0.00 0.00 0.00 2.83
295 296 3.434309 AGATGGTGGATTCCCTTGTTTG 58.566 45.455 0.00 0.00 0.00 2.93
296 297 2.765689 TGGTGGATTCCCTTGTTTGT 57.234 45.000 0.00 0.00 0.00 2.83
297 298 3.885976 TGGTGGATTCCCTTGTTTGTA 57.114 42.857 0.00 0.00 0.00 2.41
298 299 4.186077 TGGTGGATTCCCTTGTTTGTAA 57.814 40.909 0.00 0.00 0.00 2.41
299 300 4.746466 TGGTGGATTCCCTTGTTTGTAAT 58.254 39.130 0.00 0.00 0.00 1.89
300 301 5.151454 TGGTGGATTCCCTTGTTTGTAATT 58.849 37.500 0.00 0.00 0.00 1.40
301 302 5.604650 TGGTGGATTCCCTTGTTTGTAATTT 59.395 36.000 0.00 0.00 0.00 1.82
302 303 6.782988 TGGTGGATTCCCTTGTTTGTAATTTA 59.217 34.615 0.00 0.00 0.00 1.40
303 304 7.290248 TGGTGGATTCCCTTGTTTGTAATTTAA 59.710 33.333 0.00 0.00 0.00 1.52
304 305 7.817478 GGTGGATTCCCTTGTTTGTAATTTAAG 59.183 37.037 0.00 0.00 0.00 1.85
305 306 8.364894 GTGGATTCCCTTGTTTGTAATTTAAGT 58.635 33.333 0.00 0.00 0.00 2.24
306 307 8.929487 TGGATTCCCTTGTTTGTAATTTAAGTT 58.071 29.630 0.00 0.00 0.00 2.66
307 308 9.772973 GGATTCCCTTGTTTGTAATTTAAGTTT 57.227 29.630 0.00 0.00 0.00 2.66
309 310 8.859517 TTCCCTTGTTTGTAATTTAAGTTTCG 57.140 30.769 0.00 0.00 0.00 3.46
310 311 6.919115 TCCCTTGTTTGTAATTTAAGTTTCGC 59.081 34.615 0.00 0.00 0.00 4.70
311 312 6.921307 CCCTTGTTTGTAATTTAAGTTTCGCT 59.079 34.615 0.00 0.00 0.00 4.93
312 313 7.436970 CCCTTGTTTGTAATTTAAGTTTCGCTT 59.563 33.333 0.00 0.00 41.05 4.68
313 314 9.453325 CCTTGTTTGTAATTTAAGTTTCGCTTA 57.547 29.630 0.00 0.00 38.57 3.09
315 316 9.453325 TTGTTTGTAATTTAAGTTTCGCTTAGG 57.547 29.630 0.00 0.00 40.41 2.69
316 317 8.623030 TGTTTGTAATTTAAGTTTCGCTTAGGT 58.377 29.630 0.00 0.00 40.41 3.08
325 326 9.887406 TTTAAGTTTCGCTTAGGTATTTTCTTG 57.113 29.630 0.00 0.00 40.41 3.02
326 327 7.506328 AAGTTTCGCTTAGGTATTTTCTTGT 57.494 32.000 0.00 0.00 35.27 3.16
327 328 8.611654 AAGTTTCGCTTAGGTATTTTCTTGTA 57.388 30.769 0.00 0.00 35.27 2.41
328 329 8.611654 AGTTTCGCTTAGGTATTTTCTTGTAA 57.388 30.769 0.00 0.00 0.00 2.41
329 330 9.227777 AGTTTCGCTTAGGTATTTTCTTGTAAT 57.772 29.630 0.00 0.00 0.00 1.89
330 331 9.274065 GTTTCGCTTAGGTATTTTCTTGTAATG 57.726 33.333 0.00 0.00 0.00 1.90
331 332 8.556213 TTCGCTTAGGTATTTTCTTGTAATGT 57.444 30.769 0.00 0.00 0.00 2.71
332 333 8.556213 TCGCTTAGGTATTTTCTTGTAATGTT 57.444 30.769 0.00 0.00 0.00 2.71
333 334 8.447833 TCGCTTAGGTATTTTCTTGTAATGTTG 58.552 33.333 0.00 0.00 0.00 3.33
334 335 8.447833 CGCTTAGGTATTTTCTTGTAATGTTGA 58.552 33.333 0.00 0.00 0.00 3.18
355 356 9.695526 TGTTGATATTTGATAAATGCATTAGCC 57.304 29.630 13.39 5.22 41.13 3.93
356 357 9.918630 GTTGATATTTGATAAATGCATTAGCCT 57.081 29.630 13.39 0.00 41.13 4.58
358 359 9.524496 TGATATTTGATAAATGCATTAGCCTCT 57.476 29.630 13.39 0.00 41.13 3.69
362 363 6.304356 TGATAAATGCATTAGCCTCTTTCG 57.696 37.500 13.39 0.00 41.13 3.46
363 364 6.054941 TGATAAATGCATTAGCCTCTTTCGA 58.945 36.000 13.39 0.00 41.13 3.71
364 365 6.542005 TGATAAATGCATTAGCCTCTTTCGAA 59.458 34.615 13.39 0.00 41.13 3.71
365 366 5.643379 AAATGCATTAGCCTCTTTCGAAA 57.357 34.783 13.39 10.71 41.13 3.46
366 367 5.643379 AATGCATTAGCCTCTTTCGAAAA 57.357 34.783 11.02 2.66 41.13 2.29
367 368 5.643379 ATGCATTAGCCTCTTTCGAAAAA 57.357 34.783 12.41 2.47 41.13 1.94
368 369 5.046910 TGCATTAGCCTCTTTCGAAAAAG 57.953 39.130 12.41 8.23 40.79 2.27
369 370 4.759693 TGCATTAGCCTCTTTCGAAAAAGA 59.240 37.500 12.83 6.11 43.40 2.52
370 371 5.089411 GCATTAGCCTCTTTCGAAAAAGAC 58.911 41.667 12.83 0.68 44.05 3.01
371 372 5.334879 GCATTAGCCTCTTTCGAAAAAGACA 60.335 40.000 12.83 0.00 44.05 3.41
372 373 5.924475 TTAGCCTCTTTCGAAAAAGACAG 57.076 39.130 12.83 0.00 44.63 3.51
373 374 4.073293 AGCCTCTTTCGAAAAAGACAGA 57.927 40.909 12.83 3.93 44.63 3.41
374 375 4.646572 AGCCTCTTTCGAAAAAGACAGAT 58.353 39.130 12.83 0.00 44.63 2.90
375 376 5.794894 AGCCTCTTTCGAAAAAGACAGATA 58.205 37.500 12.83 0.00 44.63 1.98
376 377 6.410540 AGCCTCTTTCGAAAAAGACAGATAT 58.589 36.000 12.83 0.00 44.63 1.63
377 378 7.556844 AGCCTCTTTCGAAAAAGACAGATATA 58.443 34.615 12.83 0.00 44.63 0.86
378 379 7.708752 AGCCTCTTTCGAAAAAGACAGATATAG 59.291 37.037 12.83 0.00 44.63 1.31
379 380 7.707035 GCCTCTTTCGAAAAAGACAGATATAGA 59.293 37.037 12.83 0.36 44.63 1.98
380 381 9.757227 CCTCTTTCGAAAAAGACAGATATAGAT 57.243 33.333 12.83 0.00 44.63 1.98
401 402 7.443302 AGATGAGAATACATTTTCCTCCAGA 57.557 36.000 0.00 0.00 0.00 3.86
402 403 7.865820 AGATGAGAATACATTTTCCTCCAGAA 58.134 34.615 0.00 0.00 0.00 3.02
403 404 8.331740 AGATGAGAATACATTTTCCTCCAGAAA 58.668 33.333 0.00 0.00 42.82 2.52
413 414 5.388599 TTTCCTCCAGAAAAGAGAAACCT 57.611 39.130 0.00 0.00 41.56 3.50
414 415 4.357918 TCCTCCAGAAAAGAGAAACCTG 57.642 45.455 0.00 0.00 32.86 4.00
415 416 3.973973 TCCTCCAGAAAAGAGAAACCTGA 59.026 43.478 0.00 0.00 32.86 3.86
416 417 4.412199 TCCTCCAGAAAAGAGAAACCTGAA 59.588 41.667 0.00 0.00 32.86 3.02
417 418 5.104109 TCCTCCAGAAAAGAGAAACCTGAAA 60.104 40.000 0.00 0.00 32.86 2.69
418 419 5.009110 CCTCCAGAAAAGAGAAACCTGAAAC 59.991 44.000 0.00 0.00 32.86 2.78
419 420 5.755849 TCCAGAAAAGAGAAACCTGAAACT 58.244 37.500 0.00 0.00 0.00 2.66
420 421 5.823045 TCCAGAAAAGAGAAACCTGAAACTC 59.177 40.000 0.00 0.00 0.00 3.01
421 422 5.590259 CCAGAAAAGAGAAACCTGAAACTCA 59.410 40.000 0.00 0.00 32.59 3.41
422 423 6.264067 CCAGAAAAGAGAAACCTGAAACTCAT 59.736 38.462 0.00 0.00 32.59 2.90
423 424 7.201857 CCAGAAAAGAGAAACCTGAAACTCATT 60.202 37.037 0.00 0.00 32.59 2.57
424 425 8.193438 CAGAAAAGAGAAACCTGAAACTCATTT 58.807 33.333 0.00 0.00 34.56 2.32
425 426 8.753133 AGAAAAGAGAAACCTGAAACTCATTTT 58.247 29.630 0.00 0.00 32.93 1.82
428 429 8.753497 AAGAGAAACCTGAAACTCATTTTAGT 57.247 30.769 0.00 0.00 31.11 2.24
429 430 8.159344 AGAGAAACCTGAAACTCATTTTAGTG 57.841 34.615 0.00 0.00 31.11 2.74
430 431 6.739112 AGAAACCTGAAACTCATTTTAGTGC 58.261 36.000 0.00 0.00 31.11 4.40
431 432 6.321181 AGAAACCTGAAACTCATTTTAGTGCA 59.679 34.615 0.00 0.00 31.11 4.57
432 433 6.655078 AACCTGAAACTCATTTTAGTGCAT 57.345 33.333 0.00 0.00 31.11 3.96
433 434 7.759489 AACCTGAAACTCATTTTAGTGCATA 57.241 32.000 0.00 0.00 31.11 3.14
434 435 7.383102 ACCTGAAACTCATTTTAGTGCATAG 57.617 36.000 0.00 0.00 31.11 2.23
435 436 7.168219 ACCTGAAACTCATTTTAGTGCATAGA 58.832 34.615 0.00 0.00 31.11 1.98
436 437 7.119846 ACCTGAAACTCATTTTAGTGCATAGAC 59.880 37.037 0.00 0.00 31.11 2.59
437 438 7.335422 CCTGAAACTCATTTTAGTGCATAGACT 59.665 37.037 0.00 0.00 31.11 3.24
438 439 8.621532 TGAAACTCATTTTAGTGCATAGACTT 57.378 30.769 0.00 0.00 0.00 3.01
439 440 8.721478 TGAAACTCATTTTAGTGCATAGACTTC 58.279 33.333 0.00 0.00 0.00 3.01
440 441 8.621532 AAACTCATTTTAGTGCATAGACTTCA 57.378 30.769 0.00 0.00 0.00 3.02
441 442 7.840342 ACTCATTTTAGTGCATAGACTTCAG 57.160 36.000 0.00 0.00 0.00 3.02
442 443 7.390027 ACTCATTTTAGTGCATAGACTTCAGT 58.610 34.615 0.00 0.00 0.00 3.41
443 444 7.880195 ACTCATTTTAGTGCATAGACTTCAGTT 59.120 33.333 0.00 0.00 0.00 3.16
444 445 8.621532 TCATTTTAGTGCATAGACTTCAGTTT 57.378 30.769 0.00 0.00 0.00 2.66
445 446 8.506437 TCATTTTAGTGCATAGACTTCAGTTTG 58.494 33.333 0.00 0.00 0.00 2.93
446 447 8.506437 CATTTTAGTGCATAGACTTCAGTTTGA 58.494 33.333 0.00 0.00 0.00 2.69
447 448 7.658179 TTTAGTGCATAGACTTCAGTTTGAG 57.342 36.000 0.00 0.00 0.00 3.02
448 449 4.573900 AGTGCATAGACTTCAGTTTGAGG 58.426 43.478 0.00 0.00 0.00 3.86
449 450 4.284490 AGTGCATAGACTTCAGTTTGAGGA 59.716 41.667 0.00 0.00 0.00 3.71
450 451 4.997395 GTGCATAGACTTCAGTTTGAGGAA 59.003 41.667 0.00 0.00 0.00 3.36
451 452 5.470098 GTGCATAGACTTCAGTTTGAGGAAA 59.530 40.000 0.00 0.00 0.00 3.13
452 453 6.017109 GTGCATAGACTTCAGTTTGAGGAAAA 60.017 38.462 0.00 0.00 0.00 2.29
453 454 6.545666 TGCATAGACTTCAGTTTGAGGAAAAA 59.454 34.615 0.00 0.00 0.00 1.94
454 455 7.080724 GCATAGACTTCAGTTTGAGGAAAAAG 58.919 38.462 0.00 0.00 0.00 2.27
455 456 7.255277 GCATAGACTTCAGTTTGAGGAAAAAGT 60.255 37.037 0.00 0.00 0.00 2.66
456 457 8.624776 CATAGACTTCAGTTTGAGGAAAAAGTT 58.375 33.333 0.00 0.00 0.00 2.66
457 458 6.856895 AGACTTCAGTTTGAGGAAAAAGTTG 58.143 36.000 0.00 0.00 0.00 3.16
458 459 6.434340 AGACTTCAGTTTGAGGAAAAAGTTGT 59.566 34.615 0.00 0.00 0.00 3.32
459 460 6.389906 ACTTCAGTTTGAGGAAAAAGTTGTG 58.610 36.000 0.00 0.00 0.00 3.33
460 461 5.323371 TCAGTTTGAGGAAAAAGTTGTGG 57.677 39.130 0.00 0.00 0.00 4.17
461 462 5.013547 TCAGTTTGAGGAAAAAGTTGTGGA 58.986 37.500 0.00 0.00 0.00 4.02
462 463 5.125417 TCAGTTTGAGGAAAAAGTTGTGGAG 59.875 40.000 0.00 0.00 0.00 3.86
463 464 5.125417 CAGTTTGAGGAAAAAGTTGTGGAGA 59.875 40.000 0.00 0.00 0.00 3.71
464 465 5.714806 AGTTTGAGGAAAAAGTTGTGGAGAA 59.285 36.000 0.00 0.00 0.00 2.87
465 466 6.381133 AGTTTGAGGAAAAAGTTGTGGAGAAT 59.619 34.615 0.00 0.00 0.00 2.40
466 467 5.772825 TGAGGAAAAAGTTGTGGAGAATG 57.227 39.130 0.00 0.00 0.00 2.67
467 468 5.200483 TGAGGAAAAAGTTGTGGAGAATGT 58.800 37.500 0.00 0.00 0.00 2.71
468 469 5.067674 TGAGGAAAAAGTTGTGGAGAATGTG 59.932 40.000 0.00 0.00 0.00 3.21
469 470 4.342092 AGGAAAAAGTTGTGGAGAATGTGG 59.658 41.667 0.00 0.00 0.00 4.17
470 471 3.733443 AAAAGTTGTGGAGAATGTGGC 57.267 42.857 0.00 0.00 0.00 5.01
471 472 2.363306 AAGTTGTGGAGAATGTGGCA 57.637 45.000 0.00 0.00 0.00 4.92
472 473 2.363306 AGTTGTGGAGAATGTGGCAA 57.637 45.000 0.00 0.00 0.00 4.52
473 474 1.956477 AGTTGTGGAGAATGTGGCAAC 59.044 47.619 0.00 0.00 37.18 4.17
474 475 1.956477 GTTGTGGAGAATGTGGCAACT 59.044 47.619 0.00 0.00 34.96 3.16
475 476 3.146066 GTTGTGGAGAATGTGGCAACTA 58.854 45.455 0.00 0.00 34.96 2.24
476 477 3.500448 TGTGGAGAATGTGGCAACTAA 57.500 42.857 0.00 0.00 37.61 2.24
477 478 4.032960 TGTGGAGAATGTGGCAACTAAT 57.967 40.909 0.00 0.00 37.61 1.73
478 479 4.406456 TGTGGAGAATGTGGCAACTAATT 58.594 39.130 0.00 0.00 37.61 1.40
479 480 4.458989 TGTGGAGAATGTGGCAACTAATTC 59.541 41.667 0.00 0.00 38.56 2.17
480 481 3.689161 TGGAGAATGTGGCAACTAATTCG 59.311 43.478 0.00 0.00 41.26 3.34
481 482 3.065371 GGAGAATGTGGCAACTAATTCGG 59.935 47.826 0.00 0.00 41.26 4.30
482 483 3.016736 AGAATGTGGCAACTAATTCGGG 58.983 45.455 0.00 0.00 41.26 5.14
483 484 2.799126 ATGTGGCAACTAATTCGGGA 57.201 45.000 0.00 0.00 37.61 5.14
484 485 2.107950 TGTGGCAACTAATTCGGGAG 57.892 50.000 0.00 0.00 37.61 4.30
485 486 1.339631 TGTGGCAACTAATTCGGGAGG 60.340 52.381 0.00 0.00 37.61 4.30
486 487 0.254747 TGGCAACTAATTCGGGAGGG 59.745 55.000 0.00 0.00 37.61 4.30
500 501 3.043418 CGGGAGGGAGGGAATAGTAAAA 58.957 50.000 0.00 0.00 0.00 1.52
577 584 2.829914 TCCCGCCATTCATGCAGC 60.830 61.111 0.00 0.00 0.00 5.25
683 725 3.499048 CGACTCAGCGTATACAACACTT 58.501 45.455 3.32 0.00 0.00 3.16
702 744 9.607285 CAACACTTGTTTAACGCTAATCTATTT 57.393 29.630 0.00 0.00 35.83 1.40
722 795 3.742433 TCTGCTATTCCTGCTAAGCTC 57.258 47.619 0.00 0.00 35.95 4.09
809 888 2.401592 CTCTCGTCTCTGTCGCCG 59.598 66.667 0.00 0.00 0.00 6.46
829 916 0.742281 CTGCCGACCTTGTCCTCATG 60.742 60.000 0.00 0.00 0.00 3.07
866 955 4.383010 CCCCCTTTAAAATCACAAGCATCC 60.383 45.833 0.00 0.00 0.00 3.51
867 956 4.383010 CCCCTTTAAAATCACAAGCATCCC 60.383 45.833 0.00 0.00 0.00 3.85
868 957 4.467438 CCCTTTAAAATCACAAGCATCCCT 59.533 41.667 0.00 0.00 0.00 4.20
869 958 5.394553 CCCTTTAAAATCACAAGCATCCCTC 60.395 44.000 0.00 0.00 0.00 4.30
870 959 5.394553 CCTTTAAAATCACAAGCATCCCTCC 60.395 44.000 0.00 0.00 0.00 4.30
871 960 2.905415 AAATCACAAGCATCCCTCCA 57.095 45.000 0.00 0.00 0.00 3.86
872 961 2.905415 AATCACAAGCATCCCTCCAA 57.095 45.000 0.00 0.00 0.00 3.53
949 1070 0.659427 CCATCCATCATCACGCACAC 59.341 55.000 0.00 0.00 0.00 3.82
951 1072 1.329599 CATCCATCATCACGCACACTG 59.670 52.381 0.00 0.00 0.00 3.66
1537 1721 3.569250 GCTGTTTATTTGGGCGAAAGA 57.431 42.857 0.34 0.00 0.00 2.52
1538 1722 4.110036 GCTGTTTATTTGGGCGAAAGAT 57.890 40.909 0.34 0.00 0.00 2.40
1539 1723 4.105486 GCTGTTTATTTGGGCGAAAGATC 58.895 43.478 0.34 0.00 0.00 2.75
1575 1765 8.065407 TGTGTTAATTAAGTCTTAACTGCGTTG 58.935 33.333 7.20 0.00 39.00 4.10
1611 1816 6.703165 TCAGAGTCGTTTTAGGTTTTAACTCC 59.297 38.462 0.00 0.00 33.95 3.85
1772 2024 2.872245 CGTGTGTGTCCATTCTTTGTCT 59.128 45.455 0.00 0.00 0.00 3.41
1791 2043 2.563179 TCTCTTGCTCCTTGTACAGTCC 59.437 50.000 0.00 0.00 0.00 3.85
1792 2044 2.564947 CTCTTGCTCCTTGTACAGTCCT 59.435 50.000 0.00 0.00 0.00 3.85
1793 2045 2.563179 TCTTGCTCCTTGTACAGTCCTC 59.437 50.000 0.00 0.00 0.00 3.71
1801 2053 4.707448 TCCTTGTACAGTCCTCTTCTGATC 59.293 45.833 0.00 0.00 36.81 2.92
1957 2209 1.198713 CCTCTAAGGGAGCAGCAAGA 58.801 55.000 0.00 0.00 40.57 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.426689 ACTGGAGAGAACATTATTGAGCA 57.573 39.130 0.00 0.00 0.00 4.26
3 4 8.378565 AGAAGAAACTGGAGAGAACATTATTGA 58.621 33.333 0.00 0.00 0.00 2.57
4 5 8.558973 AGAAGAAACTGGAGAGAACATTATTG 57.441 34.615 0.00 0.00 0.00 1.90
5 6 7.826744 GGAGAAGAAACTGGAGAGAACATTATT 59.173 37.037 0.00 0.00 0.00 1.40
7 8 6.498651 AGGAGAAGAAACTGGAGAGAACATTA 59.501 38.462 0.00 0.00 0.00 1.90
10 11 4.039730 CAGGAGAAGAAACTGGAGAGAACA 59.960 45.833 0.00 0.00 0.00 3.18
11 12 4.565022 CAGGAGAAGAAACTGGAGAGAAC 58.435 47.826 0.00 0.00 0.00 3.01
12 13 3.007398 GCAGGAGAAGAAACTGGAGAGAA 59.993 47.826 0.00 0.00 32.98 2.87
13 14 2.564947 GCAGGAGAAGAAACTGGAGAGA 59.435 50.000 0.00 0.00 32.98 3.10
14 15 2.566724 AGCAGGAGAAGAAACTGGAGAG 59.433 50.000 0.00 0.00 32.98 3.20
15 16 2.564947 GAGCAGGAGAAGAAACTGGAGA 59.435 50.000 0.00 0.00 32.98 3.71
16 17 2.354604 GGAGCAGGAGAAGAAACTGGAG 60.355 54.545 0.00 0.00 32.98 3.86
17 18 1.625818 GGAGCAGGAGAAGAAACTGGA 59.374 52.381 0.00 0.00 32.98 3.86
18 19 1.674221 CGGAGCAGGAGAAGAAACTGG 60.674 57.143 0.00 0.00 32.98 4.00
19 20 1.273606 TCGGAGCAGGAGAAGAAACTG 59.726 52.381 0.00 0.00 35.40 3.16
20 21 1.633774 TCGGAGCAGGAGAAGAAACT 58.366 50.000 0.00 0.00 0.00 2.66
21 22 2.275318 CATCGGAGCAGGAGAAGAAAC 58.725 52.381 0.00 0.00 0.00 2.78
22 23 1.208052 CCATCGGAGCAGGAGAAGAAA 59.792 52.381 0.00 0.00 0.00 2.52
23 24 0.826715 CCATCGGAGCAGGAGAAGAA 59.173 55.000 0.00 0.00 0.00 2.52
24 25 1.680522 GCCATCGGAGCAGGAGAAGA 61.681 60.000 0.00 0.00 0.00 2.87
25 26 1.227497 GCCATCGGAGCAGGAGAAG 60.227 63.158 0.00 0.00 0.00 2.85
26 27 2.735772 GGCCATCGGAGCAGGAGAA 61.736 63.158 0.00 0.00 0.00 2.87
27 28 3.157252 GGCCATCGGAGCAGGAGA 61.157 66.667 0.00 0.00 0.00 3.71
28 29 4.247380 GGGCCATCGGAGCAGGAG 62.247 72.222 4.39 0.00 0.00 3.69
30 31 3.839353 GATGGGCCATCGGAGCAGG 62.839 68.421 29.43 0.00 31.01 4.85
31 32 2.281345 GATGGGCCATCGGAGCAG 60.281 66.667 29.43 0.00 31.01 4.24
32 33 3.089217 TGATGGGCCATCGGAGCA 61.089 61.111 34.64 19.43 43.14 4.26
33 34 2.281345 CTGATGGGCCATCGGAGC 60.281 66.667 40.54 20.40 46.76 4.70
36 37 2.430465 CTAAATCTGATGGGCCATCGG 58.570 52.381 38.65 38.65 45.60 4.18
37 38 2.038952 TCCTAAATCTGATGGGCCATCG 59.961 50.000 34.64 28.65 43.14 3.84
38 39 3.795688 TCCTAAATCTGATGGGCCATC 57.204 47.619 34.65 34.65 40.88 3.51
39 40 3.205056 TGTTCCTAAATCTGATGGGCCAT 59.795 43.478 21.39 21.39 0.00 4.40
40 41 2.580322 TGTTCCTAAATCTGATGGGCCA 59.420 45.455 9.61 9.61 0.00 5.36
41 42 3.297134 TGTTCCTAAATCTGATGGGCC 57.703 47.619 0.00 0.00 0.00 5.80
42 43 5.659440 TTTTGTTCCTAAATCTGATGGGC 57.341 39.130 0.00 0.00 0.00 5.36
43 44 6.460123 CCGATTTTGTTCCTAAATCTGATGGG 60.460 42.308 0.00 0.00 38.99 4.00
44 45 6.095440 ACCGATTTTGTTCCTAAATCTGATGG 59.905 38.462 0.00 0.00 38.99 3.51
45 46 7.088589 ACCGATTTTGTTCCTAAATCTGATG 57.911 36.000 0.00 0.00 38.99 3.07
46 47 6.884295 TGACCGATTTTGTTCCTAAATCTGAT 59.116 34.615 0.00 0.00 38.99 2.90
47 48 6.234920 TGACCGATTTTGTTCCTAAATCTGA 58.765 36.000 0.00 0.00 38.99 3.27
48 49 6.371548 TCTGACCGATTTTGTTCCTAAATCTG 59.628 38.462 0.00 0.00 38.99 2.90
49 50 6.371825 GTCTGACCGATTTTGTTCCTAAATCT 59.628 38.462 0.00 0.00 38.99 2.40
50 51 6.148811 TGTCTGACCGATTTTGTTCCTAAATC 59.851 38.462 5.17 0.00 38.19 2.17
51 52 6.001460 TGTCTGACCGATTTTGTTCCTAAAT 58.999 36.000 5.17 0.00 0.00 1.40
52 53 5.369833 TGTCTGACCGATTTTGTTCCTAAA 58.630 37.500 5.17 0.00 0.00 1.85
53 54 4.963373 TGTCTGACCGATTTTGTTCCTAA 58.037 39.130 5.17 0.00 0.00 2.69
54 55 4.610605 TGTCTGACCGATTTTGTTCCTA 57.389 40.909 5.17 0.00 0.00 2.94
55 56 3.485463 TGTCTGACCGATTTTGTTCCT 57.515 42.857 5.17 0.00 0.00 3.36
56 57 3.502211 ACATGTCTGACCGATTTTGTTCC 59.498 43.478 5.17 0.00 0.00 3.62
57 58 4.749245 ACATGTCTGACCGATTTTGTTC 57.251 40.909 5.17 0.00 0.00 3.18
58 59 5.514274 AAACATGTCTGACCGATTTTGTT 57.486 34.783 0.00 3.55 0.00 2.83
59 60 6.655003 AGATAAACATGTCTGACCGATTTTGT 59.345 34.615 0.00 0.00 0.00 2.83
60 61 7.076842 AGATAAACATGTCTGACCGATTTTG 57.923 36.000 0.00 0.00 0.00 2.44
61 62 7.148239 GGAAGATAAACATGTCTGACCGATTTT 60.148 37.037 0.00 2.77 0.00 1.82
62 63 6.316390 GGAAGATAAACATGTCTGACCGATTT 59.684 38.462 0.00 5.58 0.00 2.17
63 64 5.817816 GGAAGATAAACATGTCTGACCGATT 59.182 40.000 0.00 0.74 0.00 3.34
64 65 5.360591 GGAAGATAAACATGTCTGACCGAT 58.639 41.667 0.00 0.00 0.00 4.18
65 66 4.382685 GGGAAGATAAACATGTCTGACCGA 60.383 45.833 0.00 0.00 0.00 4.69
66 67 3.871594 GGGAAGATAAACATGTCTGACCG 59.128 47.826 0.00 0.00 0.00 4.79
67 68 4.080299 AGGGGAAGATAAACATGTCTGACC 60.080 45.833 0.00 0.00 0.00 4.02
68 69 5.104259 AGGGGAAGATAAACATGTCTGAC 57.896 43.478 0.00 0.00 0.00 3.51
69 70 5.032846 AGAGGGGAAGATAAACATGTCTGA 58.967 41.667 0.00 0.00 0.00 3.27
70 71 5.365021 AGAGGGGAAGATAAACATGTCTG 57.635 43.478 0.00 0.00 0.00 3.51
71 72 6.394345 AAAGAGGGGAAGATAAACATGTCT 57.606 37.500 0.00 0.00 0.00 3.41
72 73 7.039714 ACAAAAAGAGGGGAAGATAAACATGTC 60.040 37.037 0.00 0.00 0.00 3.06
73 74 6.782494 ACAAAAAGAGGGGAAGATAAACATGT 59.218 34.615 0.00 0.00 0.00 3.21
74 75 7.092716 CACAAAAAGAGGGGAAGATAAACATG 58.907 38.462 0.00 0.00 0.00 3.21
75 76 6.211384 CCACAAAAAGAGGGGAAGATAAACAT 59.789 38.462 0.00 0.00 0.00 2.71
76 77 5.538433 CCACAAAAAGAGGGGAAGATAAACA 59.462 40.000 0.00 0.00 0.00 2.83
77 78 5.538813 ACCACAAAAAGAGGGGAAGATAAAC 59.461 40.000 0.00 0.00 31.39 2.01
78 79 5.538433 CACCACAAAAAGAGGGGAAGATAAA 59.462 40.000 0.00 0.00 32.31 1.40
79 80 5.076873 CACCACAAAAAGAGGGGAAGATAA 58.923 41.667 0.00 0.00 32.31 1.75
80 81 4.508405 CCACCACAAAAAGAGGGGAAGATA 60.508 45.833 0.00 0.00 32.31 1.98
81 82 3.500343 CACCACAAAAAGAGGGGAAGAT 58.500 45.455 0.00 0.00 32.31 2.40
82 83 2.424234 CCACCACAAAAAGAGGGGAAGA 60.424 50.000 0.00 0.00 32.31 2.87
83 84 1.963515 CCACCACAAAAAGAGGGGAAG 59.036 52.381 0.00 0.00 32.31 3.46
84 85 1.289530 ACCACCACAAAAAGAGGGGAA 59.710 47.619 0.00 0.00 32.31 3.97
85 86 0.930726 ACCACCACAAAAAGAGGGGA 59.069 50.000 0.00 0.00 32.31 4.81
86 87 1.328279 GACCACCACAAAAAGAGGGG 58.672 55.000 0.00 0.00 31.39 4.79
87 88 0.951558 CGACCACCACAAAAAGAGGG 59.048 55.000 0.00 0.00 31.39 4.30
88 89 1.333619 CACGACCACCACAAAAAGAGG 59.666 52.381 0.00 0.00 0.00 3.69
89 90 1.333619 CCACGACCACCACAAAAAGAG 59.666 52.381 0.00 0.00 0.00 2.85
90 91 1.340211 ACCACGACCACCACAAAAAGA 60.340 47.619 0.00 0.00 0.00 2.52
91 92 1.099689 ACCACGACCACCACAAAAAG 58.900 50.000 0.00 0.00 0.00 2.27
92 93 0.811915 CACCACGACCACCACAAAAA 59.188 50.000 0.00 0.00 0.00 1.94
93 94 1.032657 CCACCACGACCACCACAAAA 61.033 55.000 0.00 0.00 0.00 2.44
94 95 1.452289 CCACCACGACCACCACAAA 60.452 57.895 0.00 0.00 0.00 2.83
95 96 2.190843 CCACCACGACCACCACAA 59.809 61.111 0.00 0.00 0.00 3.33
96 97 3.084646 ACCACCACGACCACCACA 61.085 61.111 0.00 0.00 0.00 4.17
97 98 2.590575 CACCACCACGACCACCAC 60.591 66.667 0.00 0.00 0.00 4.16
98 99 3.867783 CCACCACCACGACCACCA 61.868 66.667 0.00 0.00 0.00 4.17
99 100 3.868985 ACCACCACCACGACCACC 61.869 66.667 0.00 0.00 0.00 4.61
100 101 2.590575 CACCACCACCACGACCAC 60.591 66.667 0.00 0.00 0.00 4.16
101 102 3.867783 CCACCACCACCACGACCA 61.868 66.667 0.00 0.00 0.00 4.02
102 103 3.109592 TTCCACCACCACCACGACC 62.110 63.158 0.00 0.00 0.00 4.79
103 104 1.597027 CTTCCACCACCACCACGAC 60.597 63.158 0.00 0.00 0.00 4.34
104 105 2.813726 CCTTCCACCACCACCACGA 61.814 63.158 0.00 0.00 0.00 4.35
105 106 2.281484 CCTTCCACCACCACCACG 60.281 66.667 0.00 0.00 0.00 4.94
106 107 2.115266 CCCTTCCACCACCACCAC 59.885 66.667 0.00 0.00 0.00 4.16
107 108 3.182263 CCCCTTCCACCACCACCA 61.182 66.667 0.00 0.00 0.00 4.17
108 109 3.979497 CCCCCTTCCACCACCACC 61.979 72.222 0.00 0.00 0.00 4.61
109 110 2.426305 CTTCCCCCTTCCACCACCAC 62.426 65.000 0.00 0.00 0.00 4.16
110 111 2.038221 TTCCCCCTTCCACCACCA 60.038 61.111 0.00 0.00 0.00 4.17
111 112 1.726192 AACTTCCCCCTTCCACCACC 61.726 60.000 0.00 0.00 0.00 4.61
112 113 0.539669 CAACTTCCCCCTTCCACCAC 60.540 60.000 0.00 0.00 0.00 4.16
113 114 1.725169 CCAACTTCCCCCTTCCACCA 61.725 60.000 0.00 0.00 0.00 4.17
114 115 1.076727 CCAACTTCCCCCTTCCACC 59.923 63.158 0.00 0.00 0.00 4.61
115 116 1.076727 CCCAACTTCCCCCTTCCAC 59.923 63.158 0.00 0.00 0.00 4.02
116 117 2.167037 CCCCAACTTCCCCCTTCCA 61.167 63.158 0.00 0.00 0.00 3.53
117 118 2.167729 ACCCCAACTTCCCCCTTCC 61.168 63.158 0.00 0.00 0.00 3.46
118 119 1.076727 CACCCCAACTTCCCCCTTC 59.923 63.158 0.00 0.00 0.00 3.46
119 120 1.703597 ACACCCCAACTTCCCCCTT 60.704 57.895 0.00 0.00 0.00 3.95
120 121 2.037677 ACACCCCAACTTCCCCCT 60.038 61.111 0.00 0.00 0.00 4.79
121 122 2.117423 CACACCCCAACTTCCCCC 59.883 66.667 0.00 0.00 0.00 5.40
122 123 1.228459 GACACACCCCAACTTCCCC 60.228 63.158 0.00 0.00 0.00 4.81
123 124 0.185175 AAGACACACCCCAACTTCCC 59.815 55.000 0.00 0.00 0.00 3.97
124 125 1.133915 TGAAGACACACCCCAACTTCC 60.134 52.381 0.00 0.00 36.96 3.46
125 126 1.947456 GTGAAGACACACCCCAACTTC 59.053 52.381 0.00 0.00 45.32 3.01
126 127 2.052782 GTGAAGACACACCCCAACTT 57.947 50.000 0.00 0.00 45.32 2.66
127 128 3.800826 GTGAAGACACACCCCAACT 57.199 52.632 0.00 0.00 45.32 3.16
136 137 1.374758 CCGAGCAGGGTGAAGACAC 60.375 63.158 0.00 0.00 45.27 3.67
137 138 3.059982 CCGAGCAGGGTGAAGACA 58.940 61.111 0.00 0.00 35.97 3.41
138 139 2.435059 GCCGAGCAGGGTGAAGAC 60.435 66.667 0.34 0.00 41.48 3.01
139 140 3.706373 GGCCGAGCAGGGTGAAGA 61.706 66.667 0.00 0.00 41.48 2.87
140 141 2.754664 AAAGGCCGAGCAGGGTGAAG 62.755 60.000 0.00 0.00 41.48 3.02
141 142 2.748058 GAAAGGCCGAGCAGGGTGAA 62.748 60.000 0.00 0.00 41.48 3.18
142 143 3.249189 AAAGGCCGAGCAGGGTGA 61.249 61.111 0.00 0.00 41.48 4.02
143 144 2.747855 GAAAGGCCGAGCAGGGTG 60.748 66.667 0.00 0.00 41.48 4.61
144 145 2.606587 ATGAAAGGCCGAGCAGGGT 61.607 57.895 0.00 0.00 41.48 4.34
145 146 2.117156 CATGAAAGGCCGAGCAGGG 61.117 63.158 0.00 0.00 41.48 4.45
146 147 2.117156 CCATGAAAGGCCGAGCAGG 61.117 63.158 0.00 0.00 44.97 4.85
147 148 0.107703 TACCATGAAAGGCCGAGCAG 60.108 55.000 0.00 0.00 0.00 4.24
148 149 0.107703 CTACCATGAAAGGCCGAGCA 60.108 55.000 0.00 0.00 0.00 4.26
149 150 1.440145 GCTACCATGAAAGGCCGAGC 61.440 60.000 0.00 0.00 0.00 5.03
150 151 1.154205 CGCTACCATGAAAGGCCGAG 61.154 60.000 0.00 0.00 0.00 4.63
151 152 1.153449 CGCTACCATGAAAGGCCGA 60.153 57.895 0.00 0.00 0.00 5.54
152 153 1.153449 TCGCTACCATGAAAGGCCG 60.153 57.895 0.00 0.00 0.00 6.13
153 154 1.429148 CGTCGCTACCATGAAAGGCC 61.429 60.000 0.00 0.00 0.00 5.19
154 155 2.006772 CGTCGCTACCATGAAAGGC 58.993 57.895 0.00 0.00 0.00 4.35
155 156 0.460284 AGCGTCGCTACCATGAAAGG 60.460 55.000 20.25 0.00 36.99 3.11
156 157 0.924090 GAGCGTCGCTACCATGAAAG 59.076 55.000 21.77 0.00 39.88 2.62
157 158 0.245266 TGAGCGTCGCTACCATGAAA 59.755 50.000 21.77 0.00 39.88 2.69
158 159 0.459899 ATGAGCGTCGCTACCATGAA 59.540 50.000 21.77 0.38 39.88 2.57
159 160 0.459899 AATGAGCGTCGCTACCATGA 59.540 50.000 21.77 0.33 39.88 3.07
160 161 1.290203 AAATGAGCGTCGCTACCATG 58.710 50.000 21.77 0.00 39.88 3.66
161 162 2.743938 CTAAATGAGCGTCGCTACCAT 58.256 47.619 21.77 17.17 39.88 3.55
162 163 1.801395 GCTAAATGAGCGTCGCTACCA 60.801 52.381 21.77 15.50 42.62 3.25
163 164 0.853419 GCTAAATGAGCGTCGCTACC 59.147 55.000 21.77 9.51 42.62 3.18
173 174 1.334869 GTGGCGGATTGGCTAAATGAG 59.665 52.381 0.00 0.00 45.14 2.90
174 175 1.064758 AGTGGCGGATTGGCTAAATGA 60.065 47.619 0.00 0.00 45.14 2.57
175 176 1.392589 AGTGGCGGATTGGCTAAATG 58.607 50.000 0.00 0.00 45.14 2.32
176 177 2.143876 AAGTGGCGGATTGGCTAAAT 57.856 45.000 0.00 0.00 45.14 1.40
177 178 2.639065 CTAAGTGGCGGATTGGCTAAA 58.361 47.619 0.00 0.00 45.14 1.85
178 179 1.134220 CCTAAGTGGCGGATTGGCTAA 60.134 52.381 0.00 0.00 45.14 3.09
179 180 0.468226 CCTAAGTGGCGGATTGGCTA 59.532 55.000 0.00 0.00 45.14 3.93
180 181 1.224592 CCTAAGTGGCGGATTGGCT 59.775 57.895 0.00 0.00 45.14 4.75
181 182 1.095807 GTCCTAAGTGGCGGATTGGC 61.096 60.000 0.00 0.00 45.12 4.52
182 183 0.810031 CGTCCTAAGTGGCGGATTGG 60.810 60.000 0.00 0.00 33.74 3.16
183 184 2.677971 CGTCCTAAGTGGCGGATTG 58.322 57.895 0.00 0.00 33.74 2.67
188 189 2.202570 CGACCGTCCTAAGTGGCG 60.203 66.667 0.00 0.00 35.92 5.69
189 190 1.139095 CTCGACCGTCCTAAGTGGC 59.861 63.158 0.00 0.00 35.26 5.01
190 191 1.139095 GCTCGACCGTCCTAAGTGG 59.861 63.158 0.00 0.00 37.10 4.00
191 192 1.139095 GGCTCGACCGTCCTAAGTG 59.861 63.158 0.00 0.00 0.00 3.16
192 193 0.896940 TTGGCTCGACCGTCCTAAGT 60.897 55.000 0.00 0.00 43.94 2.24
193 194 0.458025 GTTGGCTCGACCGTCCTAAG 60.458 60.000 0.00 0.00 43.94 2.18
194 195 1.180456 TGTTGGCTCGACCGTCCTAA 61.180 55.000 0.00 0.00 43.94 2.69
195 196 0.968901 ATGTTGGCTCGACCGTCCTA 60.969 55.000 0.00 0.00 43.94 2.94
196 197 1.827399 AATGTTGGCTCGACCGTCCT 61.827 55.000 0.00 0.00 43.94 3.85
197 198 1.375523 AATGTTGGCTCGACCGTCC 60.376 57.895 0.00 0.00 43.94 4.79
198 199 0.949105 ACAATGTTGGCTCGACCGTC 60.949 55.000 0.00 0.00 43.94 4.79
199 200 0.949105 GACAATGTTGGCTCGACCGT 60.949 55.000 0.00 0.00 43.94 4.83
200 201 0.670546 AGACAATGTTGGCTCGACCG 60.671 55.000 0.00 0.00 45.29 4.79
201 202 3.233355 AGACAATGTTGGCTCGACC 57.767 52.632 0.00 0.00 45.29 4.79
207 208 3.149196 TGGAGAAGAAGACAATGTTGGC 58.851 45.455 0.00 0.00 36.08 4.52
208 209 3.755378 CCTGGAGAAGAAGACAATGTTGG 59.245 47.826 0.00 0.00 0.00 3.77
209 210 3.190118 GCCTGGAGAAGAAGACAATGTTG 59.810 47.826 0.00 0.00 0.00 3.33
210 211 3.181440 TGCCTGGAGAAGAAGACAATGTT 60.181 43.478 0.00 0.00 0.00 2.71
211 212 2.373169 TGCCTGGAGAAGAAGACAATGT 59.627 45.455 0.00 0.00 0.00 2.71
212 213 3.008330 CTGCCTGGAGAAGAAGACAATG 58.992 50.000 0.00 0.00 0.00 2.82
213 214 2.641815 ACTGCCTGGAGAAGAAGACAAT 59.358 45.455 0.00 0.00 0.00 2.71
214 215 2.050144 ACTGCCTGGAGAAGAAGACAA 58.950 47.619 0.00 0.00 0.00 3.18
215 216 1.345741 CACTGCCTGGAGAAGAAGACA 59.654 52.381 0.00 0.00 0.00 3.41
216 217 1.338579 CCACTGCCTGGAGAAGAAGAC 60.339 57.143 0.00 0.00 43.95 3.01
217 218 0.979665 CCACTGCCTGGAGAAGAAGA 59.020 55.000 0.00 0.00 43.95 2.87
218 219 0.979665 TCCACTGCCTGGAGAAGAAG 59.020 55.000 0.00 0.00 44.99 2.85
219 220 3.164024 TCCACTGCCTGGAGAAGAA 57.836 52.632 0.00 0.00 44.99 2.52
220 221 4.975490 TCCACTGCCTGGAGAAGA 57.025 55.556 0.00 0.00 44.99 2.87
226 227 0.107312 CTGAAGGATCCACTGCCTGG 60.107 60.000 15.82 0.00 42.29 4.45
227 228 0.907486 TCTGAAGGATCCACTGCCTG 59.093 55.000 15.82 2.43 34.00 4.85
228 229 1.202330 CTCTGAAGGATCCACTGCCT 58.798 55.000 15.82 0.00 35.61 4.75
229 230 0.463474 GCTCTGAAGGATCCACTGCC 60.463 60.000 15.82 0.00 0.00 4.85
230 231 0.809241 CGCTCTGAAGGATCCACTGC 60.809 60.000 15.82 8.16 0.00 4.40
231 232 0.809241 GCGCTCTGAAGGATCCACTG 60.809 60.000 15.82 11.43 0.00 3.66
232 233 1.519719 GCGCTCTGAAGGATCCACT 59.480 57.895 15.82 0.00 0.00 4.00
233 234 1.522580 GGCGCTCTGAAGGATCCAC 60.523 63.158 15.82 8.27 0.00 4.02
234 235 1.552799 TTGGCGCTCTGAAGGATCCA 61.553 55.000 15.82 0.00 0.00 3.41
235 236 1.092345 GTTGGCGCTCTGAAGGATCC 61.092 60.000 7.64 2.48 0.00 3.36
236 237 0.391661 TGTTGGCGCTCTGAAGGATC 60.392 55.000 7.64 0.00 0.00 3.36
237 238 0.254178 ATGTTGGCGCTCTGAAGGAT 59.746 50.000 7.64 0.00 0.00 3.24
238 239 0.674581 CATGTTGGCGCTCTGAAGGA 60.675 55.000 7.64 0.00 0.00 3.36
239 240 1.798735 CATGTTGGCGCTCTGAAGG 59.201 57.895 7.64 0.00 0.00 3.46
240 241 1.136147 GCATGTTGGCGCTCTGAAG 59.864 57.895 7.64 0.00 0.00 3.02
241 242 0.961857 ATGCATGTTGGCGCTCTGAA 60.962 50.000 7.64 0.00 36.28 3.02
242 243 1.377594 ATGCATGTTGGCGCTCTGA 60.378 52.632 7.64 0.00 36.28 3.27
243 244 1.226575 CATGCATGTTGGCGCTCTG 60.227 57.895 18.91 0.00 36.28 3.35
244 245 1.676635 ACATGCATGTTGGCGCTCT 60.677 52.632 26.61 0.21 37.90 4.09
245 246 1.515519 CACATGCATGTTGGCGCTC 60.516 57.895 29.48 0.00 39.39 5.03
246 247 2.569657 CACATGCATGTTGGCGCT 59.430 55.556 29.48 3.52 39.39 5.92
247 248 3.183323 GCACATGCATGTTGGCGC 61.183 61.111 29.48 24.17 39.39 6.53
257 258 0.896923 TCTTCCCCATTTGCACATGC 59.103 50.000 7.35 0.00 42.50 4.06
258 259 2.159014 CCATCTTCCCCATTTGCACATG 60.159 50.000 5.83 5.83 0.00 3.21
259 260 2.112998 CCATCTTCCCCATTTGCACAT 58.887 47.619 0.00 0.00 0.00 3.21
260 261 1.203162 ACCATCTTCCCCATTTGCACA 60.203 47.619 0.00 0.00 0.00 4.57
261 262 1.205417 CACCATCTTCCCCATTTGCAC 59.795 52.381 0.00 0.00 0.00 4.57
262 263 1.559368 CACCATCTTCCCCATTTGCA 58.441 50.000 0.00 0.00 0.00 4.08
263 264 0.826062 CCACCATCTTCCCCATTTGC 59.174 55.000 0.00 0.00 0.00 3.68
264 265 2.530460 TCCACCATCTTCCCCATTTG 57.470 50.000 0.00 0.00 0.00 2.32
265 266 3.630828 GGAATCCACCATCTTCCCCATTT 60.631 47.826 0.00 0.00 33.74 2.32
266 267 2.091111 GGAATCCACCATCTTCCCCATT 60.091 50.000 0.00 0.00 33.74 3.16
267 268 1.500736 GGAATCCACCATCTTCCCCAT 59.499 52.381 0.00 0.00 33.74 4.00
268 269 0.926293 GGAATCCACCATCTTCCCCA 59.074 55.000 0.00 0.00 33.74 4.96
269 270 3.829577 GGAATCCACCATCTTCCCC 57.170 57.895 0.00 0.00 33.74 4.81
271 272 2.024941 ACAAGGGAATCCACCATCTTCC 60.025 50.000 0.09 0.00 38.16 3.46
272 273 3.372440 ACAAGGGAATCCACCATCTTC 57.628 47.619 0.09 0.00 34.83 2.87
273 274 3.833559 AACAAGGGAATCCACCATCTT 57.166 42.857 0.09 0.00 34.83 2.40
274 275 3.181418 ACAAACAAGGGAATCCACCATCT 60.181 43.478 0.09 0.00 34.83 2.90
275 276 3.165071 ACAAACAAGGGAATCCACCATC 58.835 45.455 0.09 0.00 34.83 3.51
276 277 3.258722 ACAAACAAGGGAATCCACCAT 57.741 42.857 0.09 0.00 34.83 3.55
277 278 2.765689 ACAAACAAGGGAATCCACCA 57.234 45.000 0.09 0.00 34.83 4.17
278 279 5.738619 AATTACAAACAAGGGAATCCACC 57.261 39.130 0.09 0.00 34.83 4.61
279 280 8.364894 ACTTAAATTACAAACAAGGGAATCCAC 58.635 33.333 0.09 0.00 34.83 4.02
280 281 8.485578 ACTTAAATTACAAACAAGGGAATCCA 57.514 30.769 0.09 0.00 34.83 3.41
281 282 9.772973 AAACTTAAATTACAAACAAGGGAATCC 57.227 29.630 0.00 0.00 0.00 3.01
283 284 9.471084 CGAAACTTAAATTACAAACAAGGGAAT 57.529 29.630 0.00 0.00 0.00 3.01
284 285 7.435784 GCGAAACTTAAATTACAAACAAGGGAA 59.564 33.333 0.00 0.00 0.00 3.97
285 286 6.919115 GCGAAACTTAAATTACAAACAAGGGA 59.081 34.615 0.00 0.00 0.00 4.20
286 287 6.921307 AGCGAAACTTAAATTACAAACAAGGG 59.079 34.615 0.00 0.00 0.00 3.95
287 288 7.924103 AGCGAAACTTAAATTACAAACAAGG 57.076 32.000 0.00 0.00 0.00 3.61
289 290 9.453325 CCTAAGCGAAACTTAAATTACAAACAA 57.547 29.630 0.00 0.00 40.36 2.83
290 291 8.623030 ACCTAAGCGAAACTTAAATTACAAACA 58.377 29.630 0.00 0.00 40.36 2.83
299 300 9.887406 CAAGAAAATACCTAAGCGAAACTTAAA 57.113 29.630 0.00 0.00 40.36 1.52
300 301 9.059260 ACAAGAAAATACCTAAGCGAAACTTAA 57.941 29.630 0.00 0.00 40.36 1.85
301 302 8.611654 ACAAGAAAATACCTAAGCGAAACTTA 57.388 30.769 0.00 0.00 39.97 2.24
302 303 7.506328 ACAAGAAAATACCTAAGCGAAACTT 57.494 32.000 0.00 0.00 42.76 2.66
303 304 8.611654 TTACAAGAAAATACCTAAGCGAAACT 57.388 30.769 0.00 0.00 0.00 2.66
304 305 9.274065 CATTACAAGAAAATACCTAAGCGAAAC 57.726 33.333 0.00 0.00 0.00 2.78
305 306 9.005777 ACATTACAAGAAAATACCTAAGCGAAA 57.994 29.630 0.00 0.00 0.00 3.46
306 307 8.556213 ACATTACAAGAAAATACCTAAGCGAA 57.444 30.769 0.00 0.00 0.00 4.70
307 308 8.447833 CAACATTACAAGAAAATACCTAAGCGA 58.552 33.333 0.00 0.00 0.00 4.93
308 309 8.447833 TCAACATTACAAGAAAATACCTAAGCG 58.552 33.333 0.00 0.00 0.00 4.68
329 330 9.695526 GGCTAATGCATTTATCAAATATCAACA 57.304 29.630 18.75 0.00 41.91 3.33
330 331 9.918630 AGGCTAATGCATTTATCAAATATCAAC 57.081 29.630 18.75 0.00 41.91 3.18
332 333 9.524496 AGAGGCTAATGCATTTATCAAATATCA 57.476 29.630 18.75 0.00 41.91 2.15
336 337 7.864379 CGAAAGAGGCTAATGCATTTATCAAAT 59.136 33.333 18.75 0.00 41.91 2.32
337 338 7.066887 TCGAAAGAGGCTAATGCATTTATCAAA 59.933 33.333 18.75 0.00 36.48 2.69
338 339 6.542005 TCGAAAGAGGCTAATGCATTTATCAA 59.458 34.615 18.75 0.00 36.48 2.57
339 340 6.054941 TCGAAAGAGGCTAATGCATTTATCA 58.945 36.000 18.75 0.00 36.48 2.15
340 341 6.545504 TCGAAAGAGGCTAATGCATTTATC 57.454 37.500 18.75 10.47 36.48 1.75
341 342 6.942532 TTCGAAAGAGGCTAATGCATTTAT 57.057 33.333 18.75 1.03 43.69 1.40
342 343 6.751514 TTTCGAAAGAGGCTAATGCATTTA 57.248 33.333 18.75 2.98 43.69 1.40
343 344 5.643379 TTTCGAAAGAGGCTAATGCATTT 57.357 34.783 18.75 0.00 43.69 2.32
344 345 5.643379 TTTTCGAAAGAGGCTAATGCATT 57.357 34.783 17.56 17.56 43.69 3.56
345 346 5.415701 TCTTTTTCGAAAGAGGCTAATGCAT 59.584 36.000 23.65 0.00 43.69 3.96
346 347 4.759693 TCTTTTTCGAAAGAGGCTAATGCA 59.240 37.500 23.65 3.88 43.69 3.96
347 348 5.089411 GTCTTTTTCGAAAGAGGCTAATGC 58.911 41.667 21.93 5.56 43.69 3.56
348 349 6.147821 TCTGTCTTTTTCGAAAGAGGCTAATG 59.852 38.462 27.05 16.89 43.69 1.90
349 350 6.231211 TCTGTCTTTTTCGAAAGAGGCTAAT 58.769 36.000 27.05 0.00 43.69 1.73
350 351 5.607477 TCTGTCTTTTTCGAAAGAGGCTAA 58.393 37.500 27.05 15.80 43.69 3.09
351 352 5.209818 TCTGTCTTTTTCGAAAGAGGCTA 57.790 39.130 27.05 16.10 43.69 3.93
352 353 4.073293 TCTGTCTTTTTCGAAAGAGGCT 57.927 40.909 27.05 0.00 43.69 4.58
353 354 6.670077 ATATCTGTCTTTTTCGAAAGAGGC 57.330 37.500 22.30 22.30 43.69 4.70
354 355 9.757227 ATCTATATCTGTCTTTTTCGAAAGAGG 57.243 33.333 23.65 11.35 43.69 3.69
375 376 9.163894 TCTGGAGGAAAATGTATTCTCATCTAT 57.836 33.333 0.00 0.00 0.00 1.98
376 377 8.553085 TCTGGAGGAAAATGTATTCTCATCTA 57.447 34.615 0.00 0.00 0.00 1.98
377 378 7.443302 TCTGGAGGAAAATGTATTCTCATCT 57.557 36.000 0.00 0.00 0.00 2.90
378 379 8.511604 TTTCTGGAGGAAAATGTATTCTCATC 57.488 34.615 0.00 0.00 40.51 2.92
379 380 8.884124 TTTTCTGGAGGAAAATGTATTCTCAT 57.116 30.769 0.00 0.00 45.54 2.90
391 392 5.104109 TCAGGTTTCTCTTTTCTGGAGGAAA 60.104 40.000 0.00 0.00 41.58 3.13
392 393 4.412199 TCAGGTTTCTCTTTTCTGGAGGAA 59.588 41.667 0.00 0.00 0.00 3.36
393 394 3.973973 TCAGGTTTCTCTTTTCTGGAGGA 59.026 43.478 0.00 0.00 0.00 3.71
394 395 4.357918 TCAGGTTTCTCTTTTCTGGAGG 57.642 45.455 0.00 0.00 0.00 4.30
395 396 5.825151 AGTTTCAGGTTTCTCTTTTCTGGAG 59.175 40.000 0.00 0.00 0.00 3.86
396 397 5.755849 AGTTTCAGGTTTCTCTTTTCTGGA 58.244 37.500 0.00 0.00 0.00 3.86
397 398 5.590259 TGAGTTTCAGGTTTCTCTTTTCTGG 59.410 40.000 0.00 0.00 0.00 3.86
398 399 6.683974 TGAGTTTCAGGTTTCTCTTTTCTG 57.316 37.500 0.00 0.00 0.00 3.02
399 400 7.888250 AATGAGTTTCAGGTTTCTCTTTTCT 57.112 32.000 0.00 0.00 0.00 2.52
400 401 8.932945 AAAATGAGTTTCAGGTTTCTCTTTTC 57.067 30.769 0.00 0.00 35.11 2.29
402 403 9.190317 ACTAAAATGAGTTTCAGGTTTCTCTTT 57.810 29.630 0.00 0.00 0.00 2.52
403 404 8.624776 CACTAAAATGAGTTTCAGGTTTCTCTT 58.375 33.333 0.00 0.00 0.00 2.85
404 405 7.255277 GCACTAAAATGAGTTTCAGGTTTCTCT 60.255 37.037 0.00 0.00 0.00 3.10
405 406 6.858478 GCACTAAAATGAGTTTCAGGTTTCTC 59.142 38.462 0.00 0.00 0.00 2.87
406 407 6.321181 TGCACTAAAATGAGTTTCAGGTTTCT 59.679 34.615 0.00 0.00 0.00 2.52
407 408 6.503524 TGCACTAAAATGAGTTTCAGGTTTC 58.496 36.000 0.00 0.00 0.00 2.78
408 409 6.463995 TGCACTAAAATGAGTTTCAGGTTT 57.536 33.333 0.00 0.00 0.00 3.27
409 410 6.655078 ATGCACTAAAATGAGTTTCAGGTT 57.345 33.333 0.00 0.00 0.00 3.50
410 411 7.119846 GTCTATGCACTAAAATGAGTTTCAGGT 59.880 37.037 0.00 0.00 0.00 4.00
411 412 7.335422 AGTCTATGCACTAAAATGAGTTTCAGG 59.665 37.037 0.00 0.00 0.00 3.86
412 413 8.261492 AGTCTATGCACTAAAATGAGTTTCAG 57.739 34.615 0.00 0.00 0.00 3.02
413 414 8.621532 AAGTCTATGCACTAAAATGAGTTTCA 57.378 30.769 0.00 0.00 0.00 2.69
414 415 8.721478 TGAAGTCTATGCACTAAAATGAGTTTC 58.279 33.333 0.00 0.00 0.00 2.78
415 416 8.621532 TGAAGTCTATGCACTAAAATGAGTTT 57.378 30.769 0.00 0.00 0.00 2.66
416 417 7.880195 ACTGAAGTCTATGCACTAAAATGAGTT 59.120 33.333 0.00 0.00 0.00 3.01
417 418 7.390027 ACTGAAGTCTATGCACTAAAATGAGT 58.610 34.615 0.00 0.00 0.00 3.41
418 419 7.840342 ACTGAAGTCTATGCACTAAAATGAG 57.160 36.000 0.00 0.00 0.00 2.90
419 420 8.506437 CAAACTGAAGTCTATGCACTAAAATGA 58.494 33.333 0.00 0.00 0.00 2.57
420 421 8.506437 TCAAACTGAAGTCTATGCACTAAAATG 58.494 33.333 0.00 0.00 0.00 2.32
421 422 8.621532 TCAAACTGAAGTCTATGCACTAAAAT 57.378 30.769 0.00 0.00 0.00 1.82
422 423 7.173218 CCTCAAACTGAAGTCTATGCACTAAAA 59.827 37.037 0.00 0.00 0.00 1.52
423 424 6.650807 CCTCAAACTGAAGTCTATGCACTAAA 59.349 38.462 0.00 0.00 0.00 1.85
424 425 6.014584 TCCTCAAACTGAAGTCTATGCACTAA 60.015 38.462 0.00 0.00 0.00 2.24
425 426 5.480422 TCCTCAAACTGAAGTCTATGCACTA 59.520 40.000 0.00 0.00 0.00 2.74
426 427 4.284490 TCCTCAAACTGAAGTCTATGCACT 59.716 41.667 0.00 0.00 0.00 4.40
427 428 4.569943 TCCTCAAACTGAAGTCTATGCAC 58.430 43.478 0.00 0.00 0.00 4.57
428 429 4.890158 TCCTCAAACTGAAGTCTATGCA 57.110 40.909 0.00 0.00 0.00 3.96
429 430 6.560253 TTTTCCTCAAACTGAAGTCTATGC 57.440 37.500 0.00 0.00 0.00 3.14
430 431 8.159344 ACTTTTTCCTCAAACTGAAGTCTATG 57.841 34.615 0.00 0.00 0.00 2.23
431 432 8.624776 CAACTTTTTCCTCAAACTGAAGTCTAT 58.375 33.333 0.00 0.00 0.00 1.98
432 433 7.610305 ACAACTTTTTCCTCAAACTGAAGTCTA 59.390 33.333 0.00 0.00 0.00 2.59
433 434 6.434340 ACAACTTTTTCCTCAAACTGAAGTCT 59.566 34.615 0.00 0.00 0.00 3.24
434 435 6.528072 CACAACTTTTTCCTCAAACTGAAGTC 59.472 38.462 0.00 0.00 0.00 3.01
435 436 6.389906 CACAACTTTTTCCTCAAACTGAAGT 58.610 36.000 0.00 0.00 0.00 3.01
436 437 5.807011 CCACAACTTTTTCCTCAAACTGAAG 59.193 40.000 0.00 0.00 0.00 3.02
437 438 5.478679 TCCACAACTTTTTCCTCAAACTGAA 59.521 36.000 0.00 0.00 0.00 3.02
438 439 5.013547 TCCACAACTTTTTCCTCAAACTGA 58.986 37.500 0.00 0.00 0.00 3.41
439 440 5.125417 TCTCCACAACTTTTTCCTCAAACTG 59.875 40.000 0.00 0.00 0.00 3.16
440 441 5.261216 TCTCCACAACTTTTTCCTCAAACT 58.739 37.500 0.00 0.00 0.00 2.66
441 442 5.576447 TCTCCACAACTTTTTCCTCAAAC 57.424 39.130 0.00 0.00 0.00 2.93
442 443 6.154363 ACATTCTCCACAACTTTTTCCTCAAA 59.846 34.615 0.00 0.00 0.00 2.69
443 444 5.656416 ACATTCTCCACAACTTTTTCCTCAA 59.344 36.000 0.00 0.00 0.00 3.02
444 445 5.067674 CACATTCTCCACAACTTTTTCCTCA 59.932 40.000 0.00 0.00 0.00 3.86
445 446 5.507985 CCACATTCTCCACAACTTTTTCCTC 60.508 44.000 0.00 0.00 0.00 3.71
446 447 4.342092 CCACATTCTCCACAACTTTTTCCT 59.658 41.667 0.00 0.00 0.00 3.36
447 448 4.620982 CCACATTCTCCACAACTTTTTCC 58.379 43.478 0.00 0.00 0.00 3.13
448 449 4.051237 GCCACATTCTCCACAACTTTTTC 58.949 43.478 0.00 0.00 0.00 2.29
449 450 3.450457 TGCCACATTCTCCACAACTTTTT 59.550 39.130 0.00 0.00 0.00 1.94
450 451 3.030291 TGCCACATTCTCCACAACTTTT 58.970 40.909 0.00 0.00 0.00 2.27
451 452 2.665165 TGCCACATTCTCCACAACTTT 58.335 42.857 0.00 0.00 0.00 2.66
452 453 2.362077 GTTGCCACATTCTCCACAACTT 59.638 45.455 0.00 0.00 35.64 2.66
453 454 1.956477 GTTGCCACATTCTCCACAACT 59.044 47.619 0.00 0.00 35.64 3.16
454 455 1.956477 AGTTGCCACATTCTCCACAAC 59.044 47.619 0.00 0.00 38.09 3.32
455 456 2.363306 AGTTGCCACATTCTCCACAA 57.637 45.000 0.00 0.00 0.00 3.33
456 457 3.500448 TTAGTTGCCACATTCTCCACA 57.500 42.857 0.00 0.00 0.00 4.17
457 458 4.437390 CGAATTAGTTGCCACATTCTCCAC 60.437 45.833 0.00 0.00 0.00 4.02
458 459 3.689161 CGAATTAGTTGCCACATTCTCCA 59.311 43.478 0.00 0.00 0.00 3.86
459 460 3.065371 CCGAATTAGTTGCCACATTCTCC 59.935 47.826 0.00 0.00 0.00 3.71
460 461 3.065371 CCCGAATTAGTTGCCACATTCTC 59.935 47.826 0.00 0.00 0.00 2.87
461 462 3.016736 CCCGAATTAGTTGCCACATTCT 58.983 45.455 0.00 0.00 0.00 2.40
462 463 3.013921 TCCCGAATTAGTTGCCACATTC 58.986 45.455 0.00 0.00 0.00 2.67
463 464 3.016736 CTCCCGAATTAGTTGCCACATT 58.983 45.455 0.00 0.00 0.00 2.71
464 465 2.643551 CTCCCGAATTAGTTGCCACAT 58.356 47.619 0.00 0.00 0.00 3.21
465 466 1.339631 CCTCCCGAATTAGTTGCCACA 60.340 52.381 0.00 0.00 0.00 4.17
466 467 1.379527 CCTCCCGAATTAGTTGCCAC 58.620 55.000 0.00 0.00 0.00 5.01
467 468 0.254747 CCCTCCCGAATTAGTTGCCA 59.745 55.000 0.00 0.00 0.00 4.92
468 469 0.544697 TCCCTCCCGAATTAGTTGCC 59.455 55.000 0.00 0.00 0.00 4.52
469 470 1.475213 CCTCCCTCCCGAATTAGTTGC 60.475 57.143 0.00 0.00 0.00 4.17
470 471 1.141053 CCCTCCCTCCCGAATTAGTTG 59.859 57.143 0.00 0.00 0.00 3.16
471 472 1.009183 TCCCTCCCTCCCGAATTAGTT 59.991 52.381 0.00 0.00 0.00 2.24
472 473 0.640495 TCCCTCCCTCCCGAATTAGT 59.360 55.000 0.00 0.00 0.00 2.24
473 474 1.802553 TTCCCTCCCTCCCGAATTAG 58.197 55.000 0.00 0.00 0.00 1.73
474 475 2.507478 ATTCCCTCCCTCCCGAATTA 57.493 50.000 0.00 0.00 0.00 1.40
475 476 2.339769 CTATTCCCTCCCTCCCGAATT 58.660 52.381 0.00 0.00 0.00 2.17
476 477 1.223337 ACTATTCCCTCCCTCCCGAAT 59.777 52.381 0.00 0.00 0.00 3.34
477 478 0.640495 ACTATTCCCTCCCTCCCGAA 59.360 55.000 0.00 0.00 0.00 4.30
478 479 1.537800 TACTATTCCCTCCCTCCCGA 58.462 55.000 0.00 0.00 0.00 5.14
479 480 2.393630 TTACTATTCCCTCCCTCCCG 57.606 55.000 0.00 0.00 0.00 5.14
500 501 6.967767 TGTTTTGTTGTCGTTCGTTATCATTT 59.032 30.769 0.00 0.00 0.00 2.32
503 504 5.466432 TGTTTTGTTGTCGTTCGTTATCA 57.534 34.783 0.00 0.00 0.00 2.15
504 505 6.466730 AGTTTGTTTTGTTGTCGTTCGTTATC 59.533 34.615 0.00 0.00 0.00 1.75
505 506 6.316319 AGTTTGTTTTGTTGTCGTTCGTTAT 58.684 32.000 0.00 0.00 0.00 1.89
506 507 5.687828 AGTTTGTTTTGTTGTCGTTCGTTA 58.312 33.333 0.00 0.00 0.00 3.18
560 562 2.829914 GCTGCATGAATGGCGGGA 60.830 61.111 0.00 0.00 38.10 5.14
577 584 3.782244 GCAACGCGGTCTCTGCAG 61.782 66.667 12.47 7.63 34.87 4.41
683 725 7.843490 AGCAGAAATAGATTAGCGTTAAACA 57.157 32.000 0.00 0.00 0.00 2.83
702 744 2.366916 GGAGCTTAGCAGGAATAGCAGA 59.633 50.000 7.07 0.00 36.11 4.26
722 795 1.046472 TATGGGTGGTGACTAGGCGG 61.046 60.000 0.00 0.00 0.00 6.13
809 888 2.435059 GAGGACAAGGTCGGCAGC 60.435 66.667 0.00 0.00 32.65 5.25
829 916 4.475135 GGGGAGAAGGTGCCGAGC 62.475 72.222 0.00 0.00 37.60 5.03
866 955 0.622665 AGGCTTGATGGAGTTGGAGG 59.377 55.000 0.00 0.00 0.00 4.30
867 956 1.280133 TGAGGCTTGATGGAGTTGGAG 59.720 52.381 0.00 0.00 0.00 3.86
868 957 1.003580 GTGAGGCTTGATGGAGTTGGA 59.996 52.381 0.00 0.00 0.00 3.53
869 958 1.457346 GTGAGGCTTGATGGAGTTGG 58.543 55.000 0.00 0.00 0.00 3.77
870 959 1.081892 CGTGAGGCTTGATGGAGTTG 58.918 55.000 0.00 0.00 0.00 3.16
871 960 0.674895 GCGTGAGGCTTGATGGAGTT 60.675 55.000 0.00 0.00 39.11 3.01
872 961 1.078848 GCGTGAGGCTTGATGGAGT 60.079 57.895 0.00 0.00 39.11 3.85
949 1070 2.588596 TGCCTCGTGTGTGTGCAG 60.589 61.111 0.00 0.00 0.00 4.41
951 1072 3.349006 CCTGCCTCGTGTGTGTGC 61.349 66.667 0.00 0.00 0.00 4.57
1176 1318 3.083997 AGGATGGCCTCGACCACC 61.084 66.667 3.32 1.97 42.19 4.61
1464 1606 0.259938 GGATGAAGGAATGGCAGGGT 59.740 55.000 0.00 0.00 0.00 4.34
1535 1719 2.930826 AACACACCTGAAACCGATCT 57.069 45.000 0.00 0.00 0.00 2.75
1536 1720 5.622770 AATTAACACACCTGAAACCGATC 57.377 39.130 0.00 0.00 0.00 3.69
1537 1721 6.713450 ACTTAATTAACACACCTGAAACCGAT 59.287 34.615 0.00 0.00 0.00 4.18
1538 1722 6.056884 ACTTAATTAACACACCTGAAACCGA 58.943 36.000 0.00 0.00 0.00 4.69
1539 1723 6.204108 AGACTTAATTAACACACCTGAAACCG 59.796 38.462 0.00 0.00 0.00 4.44
1540 1724 7.506328 AGACTTAATTAACACACCTGAAACC 57.494 36.000 0.00 0.00 0.00 3.27
1575 1765 4.999751 AACGACTCTGAAGAATGAAAGC 57.000 40.909 0.00 0.00 0.00 3.51
1772 2024 2.563179 GAGGACTGTACAAGGAGCAAGA 59.437 50.000 0.00 0.00 0.00 3.02
1791 2043 7.649370 AAATGTATATGCACGATCAGAAGAG 57.351 36.000 0.00 0.00 0.00 2.85
1792 2044 9.358872 GATAAATGTATATGCACGATCAGAAGA 57.641 33.333 0.00 0.00 0.00 2.87
1793 2045 9.143631 TGATAAATGTATATGCACGATCAGAAG 57.856 33.333 0.00 0.00 0.00 2.85
1855 2107 1.675641 AACCCAAGAGATGCACCGC 60.676 57.895 0.00 0.00 0.00 5.68
1857 2109 0.251341 ACCAACCCAAGAGATGCACC 60.251 55.000 0.00 0.00 0.00 5.01
1955 2207 1.220206 CGCAGCAATCACCCTCTCT 59.780 57.895 0.00 0.00 0.00 3.10
1957 2209 0.957395 CAACGCAGCAATCACCCTCT 60.957 55.000 0.00 0.00 0.00 3.69
2362 2617 3.507622 CCAACCCAGAGAGGAAATTTGTC 59.492 47.826 0.00 0.00 41.22 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.